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Closed conformation of the g-tubulin ring complex nucleating microtubules
Brito C, Serna M, Guerra P, Llorca O, Surrey T
Science (2024) pp. eadk6160-eadk6160 [ DOI: doi:10.1126/science.adk6160 Pubmed: 38305685 ]
- Gcp5 (Protein from Homo sapiens)
- Gamma-tubulin (Protein from Homo sapiens)
- Gcp6 (Protein from Homo sapiens)
- Gcp4 (Protein from Homo sapiens)
- Gamma-tubulin ring complex (Complex from Homo sapiens)
- Gcp2 (Protein from Homo sapiens)
- Gcp3 (Protein from Homo sapiens)
Early closed conformation of the g-tubulin ring complex
Resolution: 3.72 Å
EM Method: Single-particle
Fitted PDBs: 8q62
Q-score: 0.177
Brito C, Serna M, Guerra P, Llorca O, Surrey T
Science (2024) 383 pp. 870-876 [ DOI: doi:10.1126/science.adk6160 Pubmed: 38305685 ]
- Gamma-tubulin complex component 2 (102 kDa, Protein from Homo sapiens)
- Gamma-tubulin complex component 6 (200 kDa, Protein from Homo sapiens)
- Gamma-tubulin complex component 3 (103 kDa, Protein from Homo sapiens)
- Gamma-tubulin complex component 4 (76 kDa, Protein from Homo sapiens)
- Tubulin gamma-1 chain (51 kDa, Protein from Homo sapiens)
- Gamma-tubulin ring complex (Complex from Homo sapiens)
- Gamma-tubulin complex component 5 (118 kDa, Protein from Homo sapiens)
Cryo-Em structure of the hexameric RUVBL1-RUVBL2 in complex with ZNHIT2
Resolution: 4.1 Å
EM Method: Single-particle
Fitted PDBs: 7p6x
Q-score: 0.313
Serna M, Gonzalez-Corpas A, Cabezudo S, Lopez-Perrote A, Degliesposti G, Zarzuela E, Skehel JM, Munoz J, Llorca O
Nucleic Acids Res (2022) 50 pp. 1128-1146 [ DOI: doi:10.1093/nar/gkab1267 Pubmed: 34951455 ]
- Ruvb-like 2 (51 kDa, Protein from Homo sapiens)
- Hexameric ruvbl1-ruvbl2 aaa ring in complex with znhit2 (Complex from Homo sapiens)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Ruvb-like 1 (50 kDa, Protein from Homo sapiens)
Resolution: 4.13 Å
EM Method: Single-particle
Fitted PDBs: 7as4
Q-score: 0.199
Zimmermann F, Serna M, Ezquerra A, Fernandez-Leiro R, Llorca O, Luders J
Sci Adv (2020) 6 [ Pubmed: 33355144 DOI: doi:10.1126/sciadv.abe0894 ]
- Gamma-tubulin complex component 2 (102 kDa, Protein from Homo sapiens)
- Actin, cytoplasmic 1 (41 kDa, Protein from Homo sapiens)
- Gamma-tubulin complex component 6 (200 kDa, Protein from Homo sapiens)
- Gamma-tubulin complex component 3 (103 kDa, Protein from Homo sapiens)
- Recombinant human gamma-tubulin ring complex (Complex from Homo sapiens)
- Mitotic-spindle organizing protein 1 (8 kDa, Protein from Homo sapiens)
- Gamma-tubulin complex component 4 (76 kDa, Protein from Homo sapiens)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Gamma-tubulin complex component 5 (118 kDa, Protein from Homo sapiens)
- Tubulin gamma-1 chain (50 kDa, Protein from Homo sapiens)
Cryo-EM structure of the RUVBL1-RUVBL2-DHX34 complex
Lopez-Perrote A, Hug N, Gonzalez-Corpas A, Rodriguez CF, Serna M, Garcia-Martin C, Boskovic J, Fernandez-Leiro R, Caceres JF, Llorca O
eLife (2020) 9 [ Pubmed: 33205750 DOI: doi:10.7554/eLife.63042 ]
- Ruvbl1 (Protein from Homo sapiens)
- Ruvbl1-ruvbl2-dhx34 complex (449 kDa, Complex from Homo sapiens)
- Dhx34 (Protein from Homo sapiens)
- Ruvbl2 (Protein from Homo sapiens)
RUVBL1-RUVBL2 heterohexameric ring after binding of RNA helicase DHX34
Resolution: 4.18 Å
EM Method: Single-particle
Fitted PDBs: 7aho
Q-score: 0.439
Lopez-Perrote A, Hug N, Gonzalez-Corpas A, Rodriguez CF, Serna M, Garcia-Martin C, Boskovic J, Fernandez-Leiro R, Caceres JF, Llorca O
eLife (2020) 9 [ Pubmed: 33205750 DOI: doi:10.7554/eLife.63042 ]
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Ruvb-like 1 (52 kDa, Protein from Homo sapiens)
- Ruvb-like 2 (53 kDa, Protein from Homo sapiens)
- Ruvbl1-ruvbl2 heterohexameric ring after binding of rna helicase dhx34 (449 kDa, Complex from Homo sapiens)
OPEN CONFORMATION OF THE MEMBRANE ATTACK COMPLEX
Resolution: 5.6 Å
EM Method: Single-particle
Fitted PDBs: 6h03
Q-score: 0.156
Menny A, Serna M, Boyd CM, Gardner S, Joseph AP, Morgan BP, Topf M, Brooks NJ, Bubeck D
Nat Commun (2018) 9 pp. 5316-5316 [ Pubmed: 30552328 DOI: doi:10.1038/s41467-018-07653-5 ]
- Complement component c9 (61 kDa, Protein from Human)
- C8 gamma (Complex from Homo sapiens)
- Complement component c8 gamma chain (20 kDa, Protein from Human)
- Complement component c8 alpha chain (61 kDa, Protein from Human)
- Complement c5,complement c5 (177 kDa, Protein from Human)
- Membrane attack complex (69 kDa, Complex from Homo sapiens)
- C8 beta (Complex from Homo sapiens)
- C5b (Complex from Homo sapiens)
- C9 (Complex from Homo sapiens)
- Complement component c7 (91 kDa, Protein from Human)
- C8 alpha (Complex from Homo sapiens)
- Complement component c8 beta chain (61 kDa, Protein from Human)
- Complement component c6 (102 kDa, Protein from Human)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- C7 (Complex from Homo sapiens)
- C6 (Complex from Homo sapiens)
Closed conformation of the Membrane Attack Complex
Resolution: 5.6 Å
EM Method: Single-particle
Fitted PDBs: 6h04
Q-score: 0.179
Menny A, Serna M, Boyd CM, Gardner S, Joseph AP, Morgan BP, Topf M, Brooks NJ, Bubeck D
Nat Commun (2018) 9 pp. 5316-5316 [ Pubmed: 30552328 DOI: doi:10.1038/s41467-018-07653-5 ]
- Complement component c9 (61 kDa, Protein from Human)
- C8 gamma (Complex from Homo sapiens)
- Complement component c8 gamma chain (20 kDa, Protein from Human)
- Complement component c8 alpha chain (61 kDa, Protein from Human)
- Complement c5,complement c5 (177 kDa, Protein from Human)
- Membrane attack complex (69 kDa, Complex from Homo sapiens)
- C8 beta (Complex from Homo sapiens)
- C5b (Complex from Homo sapiens)
- C9 (Complex from Homo sapiens)
- Complement component c7 (91 kDa, Protein from Human)
- C8 alpha (Complex from Homo sapiens)
- Complement component c8 beta chain (61 kDa, Protein from Human)
- Complement component c6 (102 kDa, Protein from Human)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- C7 (Complex from Homo sapiens)
- C6 (Complex from Homo sapiens)
Asymmetric region of the Membrane Attack Complex in the closed conformation
Menny A, Serna M, Boyd CM, Gardner S, Joseph AP, Morgan BP, Topf M, Brooks NJ, Bubeck D
Nat Commun (2018) 9 pp. 5316-5316 [ Pubmed: 30552328 DOI: doi:10.1038/s41467-018-07653-5 ]
- C8 gamma (Complex from Homo sapiens)
- Membrane attack complex (69 kDa, Complex from Homo sapiens)
- C8 beta (Complex from Homo sapiens)
- C5b (Complex from Homo sapiens)
- C9 (Complex from Homo sapiens)
- C8 alpha (Complex from Homo sapiens)
- C7 (Complex from Homo sapiens)
- C6 (Complex from Homo sapiens)
Consensus map of the Membrane Attack Complex
Menny A, Serna M, Boyd CM, Gardner S, Joseph AP, Morgan BP, Topf M, Brooks NJ, Bubeck D
Nat Commun (2018) 9 pp. 5316-5316 [ Pubmed: 30552328 DOI: doi:10.1038/s41467-018-07653-5 ]
- C8 gamma (Complex from Homo sapiens)
- Membrane attack complex (69 kDa, Complex from Homo sapiens)
- C8 beta (Complex from Homo sapiens)
- C5b (Complex from Homo sapiens)
- C9 (Complex from Homo sapiens)
- C8 alpha (Complex from Homo sapiens)
- C7 (Complex from Homo sapiens)
- C6 (Complex from Homo sapiens)