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Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7xog
Q-score: 0.294
Tan S, Zhao J, Hu X, Li Y, Wu Z, Lu G, Yu Z, Du B, Liu Y, Li L, Chen Y, Li Y, Yao Y, Zhang X, Rao J, Gao G, Peng Y, Liu H, Yuan Z, Liu J, Wang Q, Hu H, Gao X, Zhou H, Yu H, Xu Y, Yu W, Feng L, Wang M, Shan C, Lu J, Lin J
Sci Bull (Beijing) (2023) 68 pp. 3192-3206 [ DOI: doi:10.1016/j.scib.2023.11.024 Pubmed: 37993332 ]
- Spike glycoprotein,peptide (142 kDa, Protein from synthetic construct)
- Severe acute respiratory syndrome coronavirus (Complex from Severe acute respiratory syndrome coronavirus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Alpha-d-mannopyranose (180 Da, Ligand)
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 7xoe
Q-score: 0.301
Tan S, Zhao J, Hu X, Li Y, Wu Z, Lu G, Yu Z, Du B, Liu Y, Li L, Chen Y, Li Y, Yao Y, Zhang X, Rao J, Gao G, Peng Y, Liu H, Yuan Z, Liu J, Wang Q, Hu H, Gao X, Zhou H, Yu H, Xu Y, Yu W, Feng L, Wang M, Shan C, Lu J, Lin J
Sci Bull (Beijing) (2023) 68 pp. 3192-3206 [ DOI: doi:10.1016/j.scib.2023.11.024 Pubmed: 37993332 ]
XBB.1.5.10 RBD in complex with ACE2
Resolution: 3.06 Å
EM Method: Single-particle
Fitted PDBs: 8wtd
Q-score: 0.508
Jian F, Feng L, Yang S, Yu Y, Wang L, Song W, Yisimayi A, Chen X, Xu Y, Wang P, Yu L, Wang J, Liu L, Niu X, Wang J, Xiao T, An R, Wang Y, Gu Q, Shao F, Jin R, Shen Z, Wang Y, Wang X, Cao Y
PLoS Pathog (2023) 19 pp. e1011868-e1011868 [ DOI: doi:10.1371/journal.ppat.1011868 Pubmed: 38117863 ]
- Rbd in complex with ace2 (Complex)
- Angiotensin-converting enzyme 2 (92 kDa, Protein from Homo sapiens)
- Spike protein s2' (22 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Xbb.1.5 rbd (Complex from Severe acute respiratory syndrome coronavirus 2)
- Human ace2 (Complex from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
XBB.1.5.70 spike protein in complex with ACE2
Resolution: 4.64 Å
EM Method: Single-particle
Fitted PDBs: 8wtj
Q-score: 0.202
Jian F, Feng L, Yang S, Yu Y, Wang L, Song W, Yisimayi A, Chen X, Xu Y, Wang P, Yu L, Wang J, Liu L, Niu X, Wang J, Xiao T, An R, Wang Y, Gu Q, Shao F, Jin R, Shen Z, Wang Y, Wang X, Cao Y
PLoS Pathog (2023) 19 pp. e1011868-e1011868 [ DOI: doi:10.1371/journal.ppat.1011868 Pubmed: 38117863 ]
- Spike protein (Complex from Severe acute respiratory syndrome coronavirus 2)
- Processed angiotensin-converting enzyme 2 (68 kDa, Protein from Homo sapiens)
- Xbb.1.5.70 spike protein in complex with hace2 (Complex)
- Human ace2 (Complex from Homo sapiens)
- Spike glycoprotein (145 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
XBB.1.5 spike protein in complex with ACE2
Resolution: 4.34 Å
EM Method: Single-particle
Fitted PDBs: 8wrm
Q-score: 0.219
Jian F, Feng L, Yang S, Yu Y, Wang L, Song W, Yisimayi A, Chen X, Xu Y, Wang P, Yu L, Wang J, Liu L, Niu X, Wang J, Xiao T, An R, Wang Y, Gu Q, Shao F, Jin R, Shen Z, Wang Y, Wang X, Cao Y
PLoS Pathog (2023) 19 pp. e1011868-e1011868 [ DOI: doi:10.1371/journal.ppat.1011868 Pubmed: 38117863 ]
- Spike glycoprotein (135 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Spike protein (Complex from Severe acute respiratory syndrome coronavirus 2)
- Processed angiotensin-converting enzyme 2 (68 kDa, Protein from Homo sapiens)
- Xbb.1.5 spike protein in complex with hace2 (Complex)
- Hace2 (Complex from Homo sapiens)
XBB.1.5.10 spike protein in complex with ACE2
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 8wro
Q-score: 0.193
Jian F, Feng L, Yang S, Yu Y, Wang L, Song W, Yisimayi A, Chen X, Xu Y, Wang P, Yu L, Wang J, Liu L, Niu X, Wang J, Xiao T, An R, Wang Y, Gu Q, Shao F, Jin R, Shen Z, Wang Y, Wang X, Cao Y
PLoS Pathog (2023) 19 pp. e1011868-e1011868 [ DOI: doi:10.1371/journal.ppat.1011868 Pubmed: 38117863 ]
- Spike protein (Complex from Severe acute respiratory syndrome coronavirus 2)
- Processed angiotensin-converting enzyme 2 (68 kDa, Protein from Homo sapiens)
- Human ace2 (Complex from Homo sapiens)
- Spike glycoprotein,spike glycoprotein,spike glycoprotein,fusion protein (145 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Xbb.1.5.10 spike protein in complex with ace2 (Complex)
SARS-CoV-2 XBB.1.5.70 in complex with ACE2
Resolution: 3.08 Å
EM Method: Single-particle
Fitted PDBs: 8wrh
Q-score: 0.497
Jian F, Feng L, Yang S, Yu Y, Wang L, Song W, Yisimayi A, Chen X, Xu Y, Wang P, Yu L, Wang J, Liu L, Niu X, Wang J, Xiao T, An R, Wang Y, Gu Q, Shao F, Jin R, Shen Z, Wang Y, Wang X, Cao Y
PLoS Pathog (2023) 19 pp. e1011868-e1011868 [ DOI: doi:10.1371/journal.ppat.1011868 Pubmed: 38117863 ]
- Spike protein s2' (22 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Xbb.1.5.70 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 xbb.1.5.70 in complex with ace2 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Angiotensin-converting enzyme 2 (92 kDa, Protein from Homo sapiens)
- Ace2 (Complex from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Resolution: 3.59 Å
EM Method: Single-particle
Fitted PDBs: 8sbb
Q-score: 0.46
Guo X, Zhang J, Han L, Lee J, Williams SC, Forsberg A, Xu Y, Austin RN, Feng L
Nat Commun (2023) 14 pp. 2180-2180 [ DOI: doi:10.1038/s41467-023-37869-z Pubmed: 37069165 ]
- Ftaklb-nanobody (Complex from Fontimonas thermophila)
- Fe (iii) ion (55 Da, Ligand)
- Dodecane (170 Da, Ligand)
- Alkane 1-monooxygenase (45 kDa, Protein from Fontimonas thermophila)
- Nanobody (14 kDa, Protein from synthetic construct)
Cryo-EM structure of human NCC (class 2)
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8fhn
Q-score: 0.549
Fan M, Zhang J, Lee CL, Zhang J, Feng L
Nature (2023) 614 pp. 788-793 [ DOI: doi:10.1038/s41586-023-05718-0 Pubmed: 36792826 ]
- Ncc-polythiazide complex (Complex from Homo sapiens)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Solute carrier family 12 member 2,solute carrier family 12 member 3 chimera (120 kDa, Protein from Homo sapiens)
- Polythiazide (439 Da, Ligand)
Cryo-EM structure of human NCC (class 1)
Resolution: 2.95 Å
EM Method: Single-particle
Fitted PDBs: 8fho
Q-score: 0.567
Fan M, Zhang J, Lee CL, Zhang J, Feng L
Nature (2023) 614 pp. 788-793 [ DOI: doi:10.1038/s41586-023-05718-0 Pubmed: 36792826 ]
- Sodium ion (22 Da, Ligand)
- Ncc-polythiazide complex (Complex from Homo sapiens)
- Polythiazide (439 Da, Ligand)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Solute carrier family 12 member 2,solute carrier family 12 member 3 chimera (120 kDa, Protein from Homo sapiens)