T3 SAM lyase in complex with S-adenosylmethionine synthase
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 8bb1
Q-score: 0.535
Andriianov A, Triguis S, Drobiazko A, Sierro N, Ivanov NV, Selmer M, Severinov K, Isaev A
Cell Rep (2023) 42 pp. 112972-112972 [ DOI: doi:10.1016/j.celrep.2023.112972 Pubmed: 37578860 ]
- Chloride ion (35 Da, Ligand)
- S-adenosylmethionine synthase in complex with t3 sam lyase. (Complex from Escherichia coli)
- S-adenosylmethionine lyase (17 kDa, Protein from Enterobacteria phage T3)
- T3 sam lyase in complex with s-adenosylmethionine synthase. (Complex from Enterobacteria phage T3)
- Water (18 Da, Ligand)
- S-adenosylmethionine synthase (41 kDa, Protein from Escherichia coli)
- T3 sam lyase in complex with e. coli s-adenosylmethionine synthase. (239 kDa, Complex from Enterobacteria phage T3)
ClpB (DWB and K476C mutant) bound to casein in presence of ATPgammaS - state KC-3
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 6qs4
Q-score: 0.213
Deville C, Franke K, Mogk A, Bukau B, Saibil HR
Cell Rep (2019) 27 pp. 3433-3446.e4 [ DOI: doi:10.1016/j.celrep.2019.05.075 Pubmed: 31216466 ]
- Chaperone protein clpb (95 kDa, Protein from Escherichia coli (strain ATCC 9637 / CCM 2024 / DSM 1116 / NCIMB 8666 / NRRL B-766 / W))
- Phosphothiophosphoric acid-adenylate ester (523 Da, Ligand)
- Clpb-dwb-k476c bound to casein in presence of atpgammas (570 kDa, Complex from Escherichia coli)
- Casein (1 kDa, Protein from Bos taurus)
- Adenosine-5'-diphosphate (427 Da, Ligand)
ClpB (DWB and K476C mutant) bound to casein in presence of ATPgammaS - state KC-1
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 6qs6
Q-score: 0.175
Deville C, Franke K, Mogk A, Bukau B, Saibil HR
Cell Rep (2019) 27 pp. 3433-3446.e4 [ DOI: doi:10.1016/j.celrep.2019.05.075 Pubmed: 31216466 ]
- Clpb-dwb-k476c bound to casein in presence of atpgammas (570 kDa, Complex)
- Phosphothiophosphoric acid-adenylate ester (523 Da, Ligand)
- Clpb-dwb-k476c (Complex from Escherichia coli)
- Casein (2 kDa, Protein from Bos taurus)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Casein (Complex from Bos taurus)
- Chaperone protein clpb (95 kDa, Protein from Escherichia coli)
ClpB (DWB and K476C mutant) bound to casein in presence of ATPgammaS - state KC-2A
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 6qs7
Q-score: 0.4
Deville C, Franke K, Mogk A, Bukau B, Saibil HR
Cell Rep (2019) 27 pp. 3433-3446.e4 [ DOI: doi:10.1016/j.celrep.2019.05.075 Pubmed: 31216466 ]
- Clpb-dwb-k476c bound to casein in presence of atpgammas (570 kDa, Complex)
- Phosphothiophosphoric acid-adenylate ester (523 Da, Ligand)
- Clpb-dwb-k476c (Complex from Escherichia coli)
- Casein (2 kDa, Protein from Bos taurus)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Casein (Complex from Bos taurus)
- Chaperone protein clpb (95 kDa, Protein from Escherichia coli)
ClpB (DWB and K476C mutant) bound to casein in presence of ATPgammaS - state KC-2B
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 6qs8
Q-score: 0.36
Deville C, Franke K, Mogk A, Bukau B, Saibil HR
Cell Rep (2019) 27 pp. 3433-3446.e4 [ DOI: doi:10.1016/j.celrep.2019.05.075 Pubmed: 31216466 ]
- Clpb-dwb-k476c bound to casein in presence of atpgammas (570 kDa, Complex)
- Phosphothiophosphoric acid-adenylate ester (523 Da, Ligand)
- Clpb-dwb-k476c (Complex from Escherichia coli)
- Casein (2 kDa, Protein from Bos taurus)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Casein (Complex from Bos taurus)
- Chaperone protein clpb (95 kDa, Protein from Escherichia coli)
ClpB (DWB mutant) bound to casein in presence of ATPgammaS - state WT-1
Resolution: 6.2 Å
EM Method: Single-particle
Fitted PDBs: 6rn2
Q-score: 0.177
Deville C, Franke K, Mogk A, Bukau B, Saibil HR
Cell Rep (2019) 27 pp. 3433-3446.e4 [ DOI: doi:10.1016/j.celrep.2019.05.075 Pubmed: 31216466 ]
- Phosphothiophosphoric acid-adenylate ester (523 Da, Ligand)
- Clpb-dwb (Complex from Escherichia coli)
- Casein (1 kDa, Protein from Escherichia coli)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Chaperone protein clpb (95 kDa, Protein from Escherichia coli HVH 50 (4-2593475))
- Casein (Complex from Bos taurus)
- Clpb-dwb bound to casein in presence of atpgammas (570 kDa, Complex)
ClpB (DWB mutant) bound to casein in presence of ATPgammaS - state WT-2B
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 6rn4
Q-score: 0.258
Deville C, Franke K, Mogk A, Bukau B, Saibil HR
Cell Rep (2019) 27 pp. 3433-3446.e4 [ DOI: doi:10.1016/j.celrep.2019.05.075 Pubmed: 31216466 ]
- Phosphothiophosphoric acid-adenylate ester (523 Da, Ligand)
- Clpb-dwb-k476c (Complex from Escherichia coli)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Casein (1 kDa, Protein from Bos taurus)
- Chaperone protein clpb (95 kDa, Protein from Escherichia coli HVH 50 (4-2593475))
- Casein (Complex from Bos taurus)
- Clpb-dwb bound to casein in presence of atpgammas (570 kDa, Complex)