Guenther EL, Cao Q, Trinh H, Lu J, Sawaya MR, Cascio D, Boyer DR, Rodriguez JA, Hughes MP, Eisenberg DS
Nat Struct Mol Biol (2018) 25 pp. 463-471 [ DOI: doi:10.1038/s41594-018-0064-2 Pubmed: 29786080 ]
- Water (18 Da, Ligand)
- Nfgtfs (751 Da, Protein from Homo sapiens)
- Crystal of nfgtfs phosphorylated on threonine. (Complex from Homo sapiens)
SWGMMGMLASQ segment from the low complexity domain of TDP-43, residues 333-343
Guenther EL, Cao Q, Trinh H, Lu J, Sawaya MR, Cascio D, Boyer DR, Rodriguez JA, Hughes MP, Eisenberg DS
Nat Struct Mol Biol (2018) 25 pp. 463-471 [ DOI: doi:10.1038/s41594-018-0064-2 Pubmed: 29786080 ]
- Crystal of swgmmgmlasq (Complex from Homo sapiens)
- Tar dna-binding protein 43 (1 kDa, Protein from Homo sapiens)
Resolution: 1.0 Å
EM Method: Electron Crystallography
Fitted PDBs: 5wkb
Q-score: 0.383
Guenther EL, Cao Q, Trinh H, Lu J, Sawaya MR, Cascio D, Boyer DR, Rodriguez JA, Hughes MP, Eisenberg DS
Nat Struct Mol Biol (2018) 25 pp. 463-471 [ DOI: doi:10.1038/s41594-018-0064-2 Pubmed: 29786080 ]
- Water (18 Da, Ligand)
- Tar dna-binding protein 43 (699 Da, Protein from Homo sapiens)
- Segment from tdp-43 (Cellular component from Homo sapiens)
MicroED structure of the segment, DLIIKGISVHI, from the RRM2 of TDP-43, residues 247-257
Guenther EL, Ge P, Trinh H, Sawaya MR, Cascio D, Boyer DR, Gonen T, Zhou ZH, Eisenberg DS
Nat Struct Mol Biol (2018) 25 pp. 311-319 [ DOI: doi:10.1038/s41594-018-0045-5 Pubmed: 29531287 ]
- Tar dna-binding protein 43 (1 kDa, Protein from Homo sapiens)
- Dliikgisvhi fibril (5 MDa, Complex from Homo sapiens)
Segment from bank vole prion protein 168-176 QYNNQNNFV
Gallagher-Jones M, Glynn C, Boyer DR, Martynowycz MW, Hernandez E, Miao J, Zee CT, Novikova IV, Goldschmidt L, McFarlane HT, Helguera GF, Evans JE, Sawaya MR, Cascio D, Eisenberg DS, Gonen T, Rodriguez JA
Nat Struct Mol Biol (2018) 25 pp. 131-134 [ Pubmed: 29335561 DOI: doi:10.1038/s41594-017-0018-0 ]
- Water (18 Da, Ligand)
- Bank vole prion 168-176 (4 kDa, Complex from Myodes glareolus)
- Major prion protein (1 kDa, Protein from Myodes glareolus)
MicroED structure of carbamazepine at 0.85 A resolution
Gallagher-Jones M, Glynn C, Boyer DR, Martynowycz MW, Hernandez E, Miao J, Zee CT, Novikova IV, Goldschmidt L, McFarlane HT, Helguera GF, Evans JE, Sawaya MR, Cascio D, Eisenberg DS, Gonen T, Rodriguez JA
Nat Struct Mol Biol (2018) 25 pp. 131-134 [ Pubmed: 29335561 DOI: doi:10.1038/s41594-017-0018-0 ]
- Carbamazepine (234 Da, Complex from unidentified)
Negative stain 3D reconstruction of the yeast 26S proteasome in complex with ubiquitin-bound Ubp6
Bashore C, Dambacher CM, Goodall EA, Matyskiela ME, Lander GC, Martin A
Nat Struct Mol Biol (2015) 22 pp. 712-719 [ DOI: doi:10.1038/nsmb.3075 Pubmed: 26301997 ]
- Ubiquitin-bound ubp6 (65 kDa, Protein from Saccharomyces cerevisiae)
- 26s proteasome (1 MDa, Protein from Saccharomyces cerevisiae)
- Yeast 26s proteasome in complex with ubiquitin-bound ubp6 (1 MDa, Sample)
Bashore C, Dambacher CM, Goodall EA, Matyskiela ME, Lander GC, Martin A
Nat Struct Mol Biol (2015) 22 pp. 712-719 [ DOI: doi:10.1038/nsmb.3075 Pubmed: 26301997 ]
Negative stain reconstruction of bovine dynactin complex
Chowdhury S, Ketcham SA, Schroer TA, Lander GC
Nat Struct Mol Biol (2015) 22 pp. 345-347 [ Pubmed: 25751425 DOI: doi:10.1038/nsmb.2996 ]
- P62 (62 kDa, Protein from Bos taurus)
- Bovine dynactin complex (1 MDa, Sample)
- Capz alpha (33 kDa, Protein from Bos taurus)
- P24 (24 kDa, Protein from Bos taurus)
- Actin (42 kDa, Protein from Bos taurus)
- P25 (25 kDa, Protein from Bos taurus)
- Capz beta (33 kDa, Protein from Bos taurus)
- P150glued (150 kDa, Protein from Bos taurus)
- Arp11 (42 kDa, Protein from Bos taurus)
- Arp1 (42 kDa, Protein from Bos taurus)
- P27 (27 kDa, Protein from Bos taurus)
- P50 (50 kDa, Protein from Bos taurus)
Mammalian 80S-HCV-IRES initiation complex with eIF5B PRE-like state
Resolution: 8.9 Å
EM Method: Single-particle
Fitted PDBs: 4ujd
Q-score: 0.14
Yamamoto H, Unbehaun A, Loerke J, Behrmann E, Collier M, Burger J, Mielke T, Spahn CMT
Nat Struct Mol Biol (2014) 21 pp. 721-727 [ Pubmed: 25064512 DOI: doi:10.1038/NSMB.2859 ]
- Hcv-ires (162 kDa, RNA from Hepatitis C virus)
- Mammalian translation initiation 80s hcv-ires complex with eif5b; pre-like state (4 MDa, Sample)
- Eif5b (160 kDa, Protein from Oryctolagus cuniculus)
- 80s ribosome (4 MDa, Complex from Oryctolagus cuniculus)
- Trna (2 kDa, RNA from Oryctolagus cuniculus)