Happy Holidays and New year from the EMDB! Please be advised that the EMDB team will be operating at reduced capacity between December 15th - January 12th. With this in mind we would ask that you be prepared for longer reply times through both our helpdesk system and the OneDep deposition system. well done on a productive 2025, wishing you all the best and we will see you in 2026!
Filter By
Current Database
- EMDB [44634]
Current status
- REL [44634]
Sample type
- Complex [38041]
- Protein [32262]
- Ligand [18589]
- RNA [4241]
- DNA [3131]
- Virus [3078]
- Sample [2964]
- Cellular component [1749]
- Cell [309]
- Other [203]
- Tissue [48]
- Em label [2]
Organism
- Homo sapiens [16724]
- Synthetic construct [2840]
- Escherichia coli [2773]
- Mus musculus [2692]
- Severe acute respiratory syndrome coronavirus [2363]
- Saccharomyces cerevisiae [2287]
- Escherichia coli [1059]
- Rattus norvegicus [1022]
- Bos taurus [942]
- Human immunodeficiency virus 1 [846]
- Oryctolagus cuniculus [785]
- Saccharomyces cerevisiae [742]
- Sus scrofa [677]
- Xenopus laevis [566]
- Lama glama [552]
- Arabidopsis thaliana [490]
- Macaca mulatta [400]
- Mycolicibacterium smegmatis [324]
- Drosophila melanogaster [253]
- Influenza a virus [250]
- Bacillus subtilis [242]
- Mycobacterium tuberculosis [237]
- Thermus thermophilus [164]
- Staphylococcus aureus [163]
- Vicugna pacos [162]
- Chlamydomonas reinhardtii [160]
- Pseudomonas aeruginosa [158]
- Chaetomium thermophilum [153]
- Gallus gallus [146]
- Escherichia coli [143]
- Tetrahymena thermophila [140]
- Mycobacterium tuberculosis [137]
- Leishmania tarentolae [136]
- Saccharomyces cerevisiae [134]
- Danio rerio [133]
- Enterobacteria phage t4 [127]
- Caenorhabditis elegans [126]
- Bacillus subtilis [119]
- Chaetomium thermophilum [116]
- Escherichia virus t7 [113]
- Bacillus sp. (strain ps3) [113]
- Ovis aries [113]
- Salmonella enterica [106]
- Severe acute respiratory syndrome coronavirus [94]
- Plasmodium falciparum [93]
- Streptococcus pyogenes [89]
- Trypanosoma brucei [89]
- African swine fever virus [85]
- Pseudomonas aeruginosa [85]
- Hepatitis b virus [84]
- Mycolicibacterium smegmatis [80]
- Spinacia oleracea [77]
- Vibrio cholerae [77]
- Schizosaccharomyces pombe [76]
- Plasmodium falciparum [75]
- Escherichia coli [75]
- Cricetulus griseus [74]
- Thermus thermophilus [70]
- Human herpesvirus 1 [69]
- Human cytomegalovirus [69]
- Middle east respiratory syndrome-related coronavirus [68]
- Monkeypox virus [67]
- Human immunodeficiency virus [67]
- Macaca fascicularis [67]
- Clostridioides difficile [65]
- Thermoplasma acidophilum [65]
- Aequorea victoria [65]
- Schizosaccharomyces pombe [62]
- Eastern equine encephalitis virus [61]
- Synechocystis sp. pcc 6803 [60]
- Lassa mammarenavirus [57]
- Polytomella sp. pringsheim 198.80 [57]
- Salmonella enterica [57]
- Adeno-associated virus [56]
- Enterovirus d [55]
- Klebsiella pneumoniae [55]
- Saccharomyces cerevisiae [55]
- Neurospora crassa [54]
- (no species) [53]
- Canis lupus [51]
- Severe acute respiratory syndrome coronavirus [50]
- Enterobacteria phage t4 [50]
- Trypanosoma brucei [50]
- Escherichia phage lambda [49]
- Dna molecule [49]
- Legionella pneumophila [49]
- Clostridium botulinum [48]
- Human coronavirus hku1 [48]
- Epstein-barr virus (strain gd1) [47]
- Severe acute respiratory syndrome coronavirus [47]
- Enterovirus a [46]
- Trichomonas vaginalis [45]
- Zika virus [45]
- Sus scrofa [45]
- Pyrococcus furiosus [44]
- Thermotoga maritima [44]
- Porphyridium purpureum [44]
- Chikungunya virus [44]
- Yarrowia lipolytica [44]
- Brome mosaic virus [43]
EM Method
- Single-particle [44634]
Resolution
- < 2Å [299]
- ≥ 2Å and < 3Å [9863]
- ≥ 3Å and < 4Å [20347]
- ≥ 4Å and < 5Å [4922]
- ≥ 5Å and < 6Å [1136]
- ≥ 6Å and < 8Å [2277]
- ≥ 8Å and < 12Å [1722]
- ≥ 12Å and < 16Å [805]
- ≥ 16Å and < 20Å [781]
- ≥ 20Å and < 30Å [1974]
- ≥ 30Å [452]
Model molecular weight
- 0-50 kDa [334]
- 50-100 kDa [1665]
- 100-250 kDa [8998]
- 250-500 kDa [7507]
- 500-1000 kDa [4310]
- 1-2 MDa [1955]
- 2-5 MDa [2046]
- 5-10 MDa [567]
- > 10 MDa [453]
Release Date
- 2025 [10093]
- 2024 [8015]
- 2023 [6505]
- 2022 [5255]
- 2021 [3975]
- 2020 [3360]
- 2019 [1937]
- 2018 [1207]
- 2017 [867]
- 2016 [815]
- 2015 [478]
- 2014 [485]
- 2013 [428]
- 2012 [283]
- 2011 [220]
- 2010 [174]
- 2009 [158]
- 2008 [50]
- 2007 [115]
- 2006 [113]
- 2005 [40]
- 2004 [30]
- 2003 [24]
- 2002 [7]
Author by name
- Ward AB [1653]
- Zhang Y [1547]
- Wang Y [1537]
- Zhang X [1409]
- Wang X [1232]
- Li Y [1041]
- Liu Y [1001]
- Wang J [981]
- Zhang Z [973]
- Li X [934]
- Li Z [890]
- Li S [843]
- Li J [818]
- Zhang J [798]
- Wang L [770]
- Gao Y [767]
- Zhang L [763]
- Chen Y [684]
- Wang H [676]
- Li H [670]
- Liu S [654]
- Chen X [616]
- Zhou ZH [578]
- Wang C [573]
- Zhang S [563]
- Chen Z [545]
- Zhang K [533]
- Liu J [532]
- Wang Q [532]
- Liu L [531]
- Shi Y [524]
- Beckmann R [523]
- Xu Y [521]
- Liu X [515]
- Zhang H [515]
- Liu Z [511]
- Liu H [509]
- Cottrell CA [505]
- Jiang Y [496]
- Yang Y [489]
- Chen J [484]
- Burton DR [477]
- Han J [468]
- Yang X [467]
- Cheng J [465]
- Zhu Y [460]
- Wang Z [445]
- Zhao Y [444]
- Ozorowski G [442]
- Wilson IA [435]
- Huang Y [429]
- Zhang C [425]
- Liu C [420]
- Sewall LM [402]
- Yu X [397]
- Torres JL [396]
- Sanders RW [392]
- Wang P [389]
- Wang S [385]
- Li W [381]
- Xu C [380]
- Cheng Y [378]
- Zhou Q [374]
- Zhao J [368]
- Berninghausen O [366]
- Rubinstein JL [365]
- Wang M [362]
- Xu J [358]
- Rao Z [356]
- Zhang R [355]
- Wu J [352]
- Lyumkis D [351]
- Brown A [348]
- Zhu X [346]
- Yang F [345]
- Sun Y [344]
- Lu Y [343]
- Zhang B [343]
- Zhang Q [340]
- Chiu W [339]
- Li L [336]
- Wang W [336]
- Kwong PD [334]
- Li M [332]
- Wu C [332]
- Richey ST [329]
- Chen L [328]
- Turner HL [328]
- Zhou Y [327]
- Zhou J [323]
- Li N [321]
- Zhou L [319]
- Li D [318]
- Zhang W [318]
- Yang H [316]
- Xu HE [315]
- Li T [313]
- Cramer P [311]
- Zhao X [311]
- Montefiori DC [310]
Author by ORCID
- Ward AB [815]
- Zhou ZH [383]
- Torres JL [340]
- Brown A [316]
- Beckmann R [303]
- Chiu W [293]
- Skiniotis G [288]
- Cheng Y [285]
- Rubinstein JL [283]
- Kwong PD [277]
- Ozorowski G [269]
- Gao N [268]
- Cottrell CA [265]
- Lyumkis D [253]
- Klinge S [245]
- Crispin M [239]
- Kobilka BK [218]
- Xu HE [212]
- Amunts A [207]
- Plevka P [206]
- Gao Y [205]
- Li H [202]
- Williamson JR [201]
- Allen JD [199]
- Burton DR [195]
- Gao GF [195]
- Baker D [192]
- Cheng J [189]
- Gmeiner P [188]
- Papasergi-scott MM [188]
- Edwards RJ [188]
- He F [186]
- Copps J [186]
- Zheng Q [185]
- Zeng J [181]
- Kotecha A [180]
- Kishikawa JI [180]
- Nureki O [179]
- Vanden Broeck A [178]
- Van Gils Mj [178]
- Kanekiyo M [176]
- Hurt E [176]
- Fuzik T [174]
- Raunser S [169]
- King NP [169]
- Hilger D [167]
- Bai XC [166]
- Panova O [162]
- Batebi H [160]
- Han J [160]
- Perez-hernandez G [160]
- Hildebrand PW [160]
- Denk T [158]
- Wang X [158]
- Subramaniam S [157]
- Sanders RW [156]
- Itoh Y [154]
- Borgnia MJ [154]
- Zhang K [154]
- Miotto MC [153]
- Greber BJ [152]
- Wilson DN [151]
- Li N [149]
- Zhang X [149]
- Kuhlbrandt W [147]
- Schulman BA [147]
- Gui M [146]
- Xia N [145]
- Du J [144]
- Venugopal H [141]
- Park YJ [141]
- Perrett HR [140]
- Robinson CV [139]
- Sewall LM [139]
- Crotty S [139]
- Xia X [138]
- Hummer G [137]
- Lander GC [137]
- Veesler D [134]
- Hite RK [133]
- Mclellan JS [133]
- Lau B [132]
- Zhang K [131]
- Zhou L [131]
- Yang M [131]
- Sui SF [130]
- Ranson NA [130]
- Zhang Y [130]
- Taylor DW [129]
- Conway JF [129]
- Moeller A [129]
- Yan C [128]
- Li S [128]
- Xiang Y [128]
- Hirst J [127]
- Rao Z [127]
- Wilson IA [127]
- Li S [126]
- Shi Y [126]
- Weninger G [126]
Journal
- NAT COMMUN [7906]
- TO BE PUBLISHED [4217]
- NATURE [4098]
- NAT STRUCT MOL BIOL [2698]
- PNAS [2492]
- SCIENCE [2407]
- CELL [1932]
- BIORXIV [1700]
- MOL CELL [1535]
- SCI ADV [1440]
- ELIFE [1306]
- STRUCTURE [1237]
- CELL REP [1165]
- NUCLEIC ACIDS RES [934]
- CELL RES [636]
- J VIROL [604]
- EMBO J [572]
- COMMUN BIOL [508]
- J BIOL CHEM [452]
- J MOL BIOL [448]
- CELL DISCOV [415]
- PLOS PATHOG [406]
- NAT CHEM BIOL [391]
- ACTA CRYSTALLOGR D STRUCT BIOL [318]
- NAT MICROBIOL [290]
- J STRUCT BIOL [233]
- MBIO [215]
- IMMUNITY [213]
- NAT PLANTS [210]
- SCI REP [195]
- PLOS BIOL [171]
- EMBO REP [167]
- CELL HOST MICROBE [162]
- PROTEIN CELL [152]
- NAT METHODS [146]
- J AM CHEM SOC [138]
- NPJ VACCINES [119]
- SCI TRANSL MED [119]
- PROTEIN SCI [116]
- VIRUSES [110]
- NEURON [98]
- IUCRJ [95]
- PLOS ONE [91]
- INT J MOL SCI [87]
- PNAS NEXUS [77]
- BIOCHEMISTRY [75]
- ISCIENCE [75]
- LIFE SCI ALLIANCE [75]
- J STRUCT BIOL X [73]
- J MED CHEM [70]
- SCI IMMUNOL [66]
- J CELL BIOL [64]
- ACS NANO [57]
- SIGNAL TRANSDUCT TARGET THER [57]
- RES SQ [52]
- INT J BIOL MACROMOL [49]
- VIROLOGY [49]
- RNA [48]
- COMMUN CHEM [47]
- BLOOD [46]
- ANGEW CHEM INT ED ENGL [45]
- BIOMOLECULES [45]
- FEBS J [45]
- ADV SCI [43]
- BIOCHEM BIOPHYS RES COMMUN [43]
- NAT CATAL [43]
- FRONT MOL BIOSCI [42]
- MOL PLANT [41]
- EBIOMEDICINE [38]
- CELL REP METHODS [36]
- GENES DEV [35]
- EMERG MICROBES INFECT [34]
- CURR BIOL [33]
- FEBS LETT [31]
- DEV CELL [29]
- FRONT IMMUNOL [29]
- NAT IMMUNOL [28]
- PLANT COMMUN. [28]
- BIOCHEM J [27]
- NATL SCI REV [27]
- J EXP MED [26]
- J GEN VIROL [26]
- PLANT CELL [26]
- NAT NANOTECHNOL [25]
- ACS CHEM BIOL [24]
- CELL REP MED [23]
- NAT MATER [23]
- CELL DEATH DIFFER. [22]
- HLIFE [22]
- SCI BULL (BEIJING) [22]
- BIOCHIM BIOPHYS ACTA BIOENERG [21]
- J.MOL.CELL.CARDIOL. [21]
- SMALL [21]
- ACS CENT SCI [20]
- ACTA CRYSTALLOGR F STRUCT BIOL COMMUN [20]
- CURR RES STRUCT BIOL [20]
- NAT CHEM [20]
- BIOPHYS J [19]
- NAT BIOMED ENG [19]
- ACS CATAL [18]
Software
- RELION [11688]
- CRYOSPARC [11580]
- CTFFIND [2029]
- GCTF [1007]
- SPIDER [465]
- CISTEM [450]
- CHIMERA [393]
- FREALIGN [366]
- EMAN [316]
- COOT [232]
- EMAN2 [225]
- IMAGIC [143]
- WARP [143]
- JSPR [142]
- XMIPP [136]
- PHENIX [132]
- AUTO3DEM [122]
- UCSF CHIMERA [91]
- SPHIRE [85]
- UCSF CHIMERAX [78]
- EMAN2, SPARX [61]
- SPARX [54]
- CTFFIND3 [53]
- SITUS [48]
- MDFF [41]
- IMAGIC, SPIDER [39]
- SPIDER, APPION [39]
- URO [39]
- APPION, SPIDER [32]
- EMFIT [32]
- CTFFIND3, RELION [31]
- SPIDER, FREALIGN [31]
- SIMPLE [30]
- EM3DR2 [28]
- BSOFT [26]
- EMAN1 [26]
- MPSA [26]
- IMIRS [25]
- CTFFIND4 [24]
- SCIPION [24]
- ISOLDE [23]
- CHIMERA, SITUS [22]
- EMAN2, RELION [22]
- J3DR [22]
- O [22]
- JALIGN [20]
- APPION [19]
- CTFTILT [19]
- EMAN1, EMAN2 [18]
- SPIDER, RELION [18]
- APPION, SPIDER, SPARX, EMAN2 [17]
- MRC [17]
- CHIMERA, COOT [16]
- IMAGIC, CUSTOM, SPIDER [16]
- MULTI-PATH SA [16]
- UNBLUR, CTFFIND4, FREALIGN [16]
- APPION, SPIDER, EMAN [15]
- EMAN, SPIDER [15]
- IMAGIC-5 [15]
- RELION, CTFFIND3 [15]
- CHIMERA, MDFF [14]
- SPIDER, EMAN [14]
- SPIDER, IMAGIC [14]
- CRYODRGN [13]
- IMAGIC-5, SPIDER [13]
- CHIMERA, FLEX-EM [12]
- EMAN2, SPIDER, XMIPP [11]
- GAP [11]
- JSPR, EMAN2, EMAN [11]
- SIGNATURE, CTFFIND3, SPIDER, SPARX [11]
- SPIDER PACKAGE [11]
- SPIDER XMIPP [11]
- EMAN, XMIPP [10]
- EMAN2, RELION, 1.3 [10]
- FOCUS [10]
- FREALIX [10]
- MOTIONCORR2 [10]
- SPARX/EMAN2 [10]
- SPIDER, SPARX [10]
- CRYOLO [9]
- EMAN, FREALIGN [9]
- EMAN2, IMAGIC, FREALIGN, RSAMPLE, CTFFIND3 [9]
- FLEX-EM [9]
- MPSA, EMAN, EMAN2 [9]
- MRC, IMAGIC, SPIDER [9]
- PFT2, EM3DR2 [9]
- SPIDER, EMAN2 [9]
- VEDA [9]
- XMIPP, SPIDER [9]
- EMAN, EMAN2, MPSA [8]
- EMPFT EM3DR [8]
- IMAGIC, FREALIGN [8]
- IMAGIC, SPIDER, EMAN [8]
- IPET [8]
- JSPR, EMAN, EMAN2 [8]
- MOLREP, CHIMERA [8]
- RELION, FREALIGN [8]
- SPIDER, PACKAGE [8]
- XMIPP, FREALIGN [8]
- CHIMERA, PHENIX [7]
Microscope
- FEI TITAN KRIOS [26234]
- TFS KRIOS [7793]
- FEI TALOS ARCTICA [2366]
- TFS GLACIOS [1341]
- FEI TECNAI F20 [1294]
- FEI POLARA 300 [821]
- FEI TECNAI SPIRIT [747]
- FEI TECNAI F30 [534]
- JEOL CRYO ARM 300 [526]
- FEI TITAN [511]
- FEI TECNAI ARCTICA [353]
- FEI TECNAI 12 [240]
- FEI/PHILIPS CM200FEG [230]
- FEI TECNAI 20 [212]
- TFS TALOS [176]
- JEOL 3200FSC [138]
- JEOL 2200FS [119]
- JEOL 2010F [108]
- FEI/PHILIPS CM300FEG/T [84]
- JEOL 2100F [82]
- JEOL CRYO ARM 200 [64]
- TFS TALOS F200C [59]
- TFS TALOS L120C [59]
- JEOL 3200FS [50]
- FEI/PHILIPS EM420 [47]
- JEOL 2100 [47]
- JEOL 1230 [38]
- FEI/PHILIPS CM120T [26]
- TFS TITAN THEMIS [26]
- FEI/PHILIPS CM200T [24]
- JEOL 1200EXII [22]
- FEI MORGAGNI [21]
- JEOL 3000SFF [21]
- OTHER [20]
- FEI/PHILIPS CM200FEG/ST [19]
- TFS TUNDRA [18]
- JEOL 4000 [17]
- JEOL 4000EX [17]
- JEOL 1400 [16]
- JEOL 1200EX [15]
- FEI TECNAI 10 [14]
- FEI/PHILIPS CM300FEG/HE [13]
- ZEISS LIBRA120PLUS [12]
- JEOL 1400/HR YPS FEG [11]
- FEI/PHILIPS CM200FEG/UT [8]
- JEOL 2010 [8]
- JEOL 2200FSC [8]
- JEOL 100CX [7]
- JEOL 3100FFC [7]
- FEI TECNAI SPHERA [5]
- FEI/PHILIPS CM12 [5]
- JEOL 2000EX [5]
- JEOL KYOTO-3000SFF [5]
- FEI/PHILIPS CM10 [4]
- JEOL 1010 [4]
- FEI/PHILIPS CM300FEG/ST [3]
- HITACHI EF2000 [3]
- HITACHI H-9500SD [3]
- JEOL 1000EES [3]
- JEOL 1200 [3]
- JEOL 2010HT [2]
- JEOL 2010UHR [2]
- FEI/PHILIPS CM200FEG/SOPHIE [1]
- FEI/PHILIPS EM400 [1]
- JEOL 2000EXII [1]
- JEOL 2010HC [1]
- JEOL 2011 [1]
Electron Source
- FIELD EMISSION GUN [42953]
- LAB6 [1241]
- OTHER [268]
- TUNGSTEN HAIRPIN [172]
Film or detector model
- GATAN K3 6K X 4K [11862]
- GATAN K2 SUMMIT 4K X 4K [8893]
- GATAN K3 BIOQUANTUM 6K X 4K [8843]
- FEI FALCON IV 4K X 4K [3765]
- FEI FALCON III 4K X 4K [2652]
- GATAN K2 QUANTUM 4K X 4K [1502]
- FEI FALCON II 4K X 4K [1248]
- KODAK SO-163 FILM [928]
- TFS FALCON 4I 4K X 4K [749]
- TVIPS TEMCAM-F416 4K X 4K [740]
- GATAN ULTRASCAN 4000 4K X 4K [594]
- FEI EAGLE 4K X 4K [472]
- OTHER [335]
- GATAN K3 BIOCONTINUUM 6K X 4K [330]
- FEI CETA 4K X 4K [253]
- GATAN K2 BASE 4K X 4K [184]
- GATAN K2 4K X 4K [180]
- TVIPS TEMCAM-F415 4K X 4K [121]
- DIRECT ELECTRON DE-20 5K X 3K [114]
- GENERIC GATAN 4K X 4K [103]
- GENERIC TVIPS 4K X 4K [71]
- FEI FALCON I 4K X 4K [68]
- GENERIC CCD [62]
- FEI EAGLE 2K X 2K [57]
- DIRECT ELECTRON DE-64 8K X 8K [47]
- TVIPS TEMCAM-F816 8K X 8K [41]
- GATAN K2 IS 4K X 4K [35]
- GATAN ULTRASCAN 1000 2K X 2K [33]
- DIRECT ELECTRON APOLLO 4K X 4K [28]
- DIRECT ELECTRON DE-16 4K X 4K [27]
- DIRECT ELECTRON DE-12 4K X 3K [24]
- GENERIC GATAN [24]
- DIRECT ELECTRON DE-10 5K X 4K [21]
- KODAK 4489 FILM [13]
- TVIPS TEMCAM-F224 2K X 2K [12]
- DECTRIS SINGLA 1K X 1K [11]
- GATAN MULTISCAN [10]
- AGFA SCIENTA FILM [9]
- GENERIC FILM [9]
- GENERIC TVIPS [8]
- GATAN ORIUS SC200 2K X 2K [7]
- TVIPS TEMCAM-F216 2K X 2K [7]
- GATAN ULTRASCAN 10000 10K X 10K [6]
- GATAN ALPINE 2.3K X 3.2K [5]
- GENERIC CCD 2K X 2K [5]
- DECTRIS ELA 1K X 0.5K [4]
- GENERIC GATAN 2K X 2K [4]
- SIA 15C 3K X 3K [4]
- GENERIC IMAGE PLATES [3]
- GENERIC TVIPS 2K X 2K [3]
- GATAN ORIUS SC1000 4K X 2.7K [2]
- GATAN ORIUS SC600 2.7K X 2.7K [2]
- DECTRIS ARINA 0.2K X 0.2K [1]
- PROSCAN TEM-PIV 2K X 2K [1]
External links
- UniProt [28795]
- PDB [28034]
- PDBe-Kb [26300]
- AlphaFold DB [24258]
- Pfam [23365]
- Gene Ontology [21993]
- InterPro [21291]
- ChEBI [17106]
- ChEMBL [15437]
- DrugBank [13654]
- Complex Portal [8454]
- EMPIAR [3241]
- SCOP2 [612]
- CATH [372]
Resolution: 3.79 Å
EM Method: Single-particle
Fitted PDBs: 8w1z
Q-score: 0.234
Gong Z, Chen S, Fu Z, Kloss B, Wang C, Kim J, Clarke OB, Fan QR, Hendrickson WA
Nat Commun (2025) [ DOI: doi:10.1038/s41467-025-66676-x Pubmed: 41315418 ]
Fokine A, Zhu J, Klose T, Vago F, Arnaud C, Wang Z, Khare B, Rossmann MG, Chen Z, Sun L, Fang Q, Kuhn R, Rao VB
To Be Published
Resolution: 2.6 Å
EM Method: Single-particle
Syau D, Farnung L
To Be Published
Resolution: 2.7 Å
EM Method: Single-particle
Syau D, Farnung L
To Be Published
Resolution: 3.4 Å
EM Method: Single-particle
Syau D, Farnung L
To Be Published
Resolution: 3.8 Å
EM Method: Single-particle
Syau D, Farnung L
To Be Published
Resolution: 2.6 Å
EM Method: Single-particle
Syau D, Farnung L
To Be Published
Resolution: 3.2 Å
EM Method: Single-particle
Syau D, Farnung L
To Be Published
Resolution: 4.0 Å
EM Method: Single-particle
Syau D, Farnung L
To Be Published
Resolution: 2.7 Å
EM Method: Single-particle
Syau D, Farnung L
To Be Published
Filter By
Current Database
- EMDB [44634]
Current status
- REL [44634]
Sample type
- Complex [38041]
- Protein [32262]
- Ligand [18589]
- RNA [4241]
- DNA [3131]
- Virus [3078]
- Sample [2964]
- Cellular component [1749]
- Cell [309]
- Other [203]
- Tissue [48]
- Em label [2]
Organism
- Homo sapiens [16724]
- Synthetic construct [2840]
- Escherichia coli [2773]
- Mus musculus [2692]
- Severe acute respiratory syndrome coronavirus [2363]
- Saccharomyces cerevisiae [2287]
- Escherichia coli [1059]
- Rattus norvegicus [1022]
- Bos taurus [942]
- Human immunodeficiency virus 1 [846]
- Oryctolagus cuniculus [785]
- Saccharomyces cerevisiae [742]
- Sus scrofa [677]
- Xenopus laevis [566]
- Lama glama [552]
- Arabidopsis thaliana [490]
- Macaca mulatta [400]
- Mycolicibacterium smegmatis [324]
- Drosophila melanogaster [253]
- Influenza a virus [250]
- Bacillus subtilis [242]
- Mycobacterium tuberculosis [237]
- Thermus thermophilus [164]
- Staphylococcus aureus [163]
- Vicugna pacos [162]
- Chlamydomonas reinhardtii [160]
- Pseudomonas aeruginosa [158]
- Chaetomium thermophilum [153]
- Gallus gallus [146]
- Escherichia coli [143]
- Tetrahymena thermophila [140]
- Mycobacterium tuberculosis [137]
- Leishmania tarentolae [136]
- Saccharomyces cerevisiae [134]
- Danio rerio [133]
- Enterobacteria phage t4 [127]
- Caenorhabditis elegans [126]
- Bacillus subtilis [119]
- Chaetomium thermophilum [116]
- Escherichia virus t7 [113]
- Bacillus sp. (strain ps3) [113]
- Ovis aries [113]
- Salmonella enterica [106]
- Severe acute respiratory syndrome coronavirus [94]
- Plasmodium falciparum [93]
- Streptococcus pyogenes [89]
- Trypanosoma brucei [89]
- African swine fever virus [85]
- Pseudomonas aeruginosa [85]
- Hepatitis b virus [84]
- Mycolicibacterium smegmatis [80]
- Spinacia oleracea [77]
- Vibrio cholerae [77]
- Schizosaccharomyces pombe [76]
- Plasmodium falciparum [75]
- Escherichia coli [75]
- Cricetulus griseus [74]
- Thermus thermophilus [70]
- Human herpesvirus 1 [69]
- Human cytomegalovirus [69]
- Middle east respiratory syndrome-related coronavirus [68]
- Monkeypox virus [67]
- Human immunodeficiency virus [67]
- Macaca fascicularis [67]
- Clostridioides difficile [65]
- Thermoplasma acidophilum [65]
- Aequorea victoria [65]
- Schizosaccharomyces pombe [62]
- Eastern equine encephalitis virus [61]
- Synechocystis sp. pcc 6803 [60]
- Lassa mammarenavirus [57]
- Polytomella sp. pringsheim 198.80 [57]
- Salmonella enterica [57]
- Adeno-associated virus [56]
- Enterovirus d [55]
- Klebsiella pneumoniae [55]
- Saccharomyces cerevisiae [55]
- Neurospora crassa [54]
- (no species) [53]
- Canis lupus [51]
- Severe acute respiratory syndrome coronavirus [50]
- Enterobacteria phage t4 [50]
- Trypanosoma brucei [50]
- Escherichia phage lambda [49]
- Dna molecule [49]
- Legionella pneumophila [49]
- Clostridium botulinum [48]
- Human coronavirus hku1 [48]
- Epstein-barr virus (strain gd1) [47]
- Severe acute respiratory syndrome coronavirus [47]
- Enterovirus a [46]
- Trichomonas vaginalis [45]
- Zika virus [45]
- Sus scrofa [45]
- Pyrococcus furiosus [44]
- Thermotoga maritima [44]
- Porphyridium purpureum [44]
- Chikungunya virus [44]
- Yarrowia lipolytica [44]
- Brome mosaic virus [43]
EM Method
- Single-particle [44634]
Resolution
- < 2Å [299]
- ≥ 2Å and < 3Å [9863]
- ≥ 3Å and < 4Å [20347]
- ≥ 4Å and < 5Å [4922]
- ≥ 5Å and < 6Å [1136]
- ≥ 6Å and < 8Å [2277]
- ≥ 8Å and < 12Å [1722]
- ≥ 12Å and < 16Å [805]
- ≥ 16Å and < 20Å [781]
- ≥ 20Å and < 30Å [1974]
- ≥ 30Å [452]
Model molecular weight
- 0-50 kDa [334]
- 50-100 kDa [1665]
- 100-250 kDa [8998]
- 250-500 kDa [7507]
- 500-1000 kDa [4310]
- 1-2 MDa [1955]
- 2-5 MDa [2046]
- 5-10 MDa [567]
- > 10 MDa [453]
Release Date
- 2025 [10093]
- 2024 [8015]
- 2023 [6505]
- 2022 [5255]
- 2021 [3975]
- 2020 [3360]
- 2019 [1937]
- 2018 [1207]
- 2017 [867]
- 2016 [815]
- 2015 [478]
- 2014 [485]
- 2013 [428]
- 2012 [283]
- 2011 [220]
- 2010 [174]
- 2009 [158]
- 2008 [50]
- 2007 [115]
- 2006 [113]
- 2005 [40]
- 2004 [30]
- 2003 [24]
- 2002 [7]
Author by name
- Ward AB [1653]
- Zhang Y [1547]
- Wang Y [1537]
- Zhang X [1409]
- Wang X [1232]
- Li Y [1041]
- Liu Y [1001]
- Wang J [981]
- Zhang Z [973]
- Li X [934]
- Li Z [890]
- Li S [843]
- Li J [818]
- Zhang J [798]
- Wang L [770]
- Gao Y [767]
- Zhang L [763]
- Chen Y [684]
- Wang H [676]
- Li H [670]
- Liu S [654]
- Chen X [616]
- Zhou ZH [578]
- Wang C [573]
- Zhang S [563]
- Chen Z [545]
- Zhang K [533]
- Liu J [532]
- Wang Q [532]
- Liu L [531]
- Shi Y [524]
- Beckmann R [523]
- Xu Y [521]
- Liu X [515]
- Zhang H [515]
- Liu Z [511]
- Liu H [509]
- Cottrell CA [505]
- Jiang Y [496]
- Yang Y [489]
- Chen J [484]
- Burton DR [477]
- Han J [468]
- Yang X [467]
- Cheng J [465]
- Zhu Y [460]
- Wang Z [445]
- Zhao Y [444]
- Ozorowski G [442]
- Wilson IA [435]
- Huang Y [429]
- Zhang C [425]
- Liu C [420]
- Sewall LM [402]
- Yu X [397]
- Torres JL [396]
- Sanders RW [392]
- Wang P [389]
- Wang S [385]
- Li W [381]
- Xu C [380]
- Cheng Y [378]
- Zhou Q [374]
- Zhao J [368]
- Berninghausen O [366]
- Rubinstein JL [365]
- Wang M [362]
- Xu J [358]
- Rao Z [356]
- Zhang R [355]
- Wu J [352]
- Lyumkis D [351]
- Brown A [348]
- Zhu X [346]
- Yang F [345]
- Sun Y [344]
- Lu Y [343]
- Zhang B [343]
- Zhang Q [340]
- Chiu W [339]
- Li L [336]
- Wang W [336]
- Kwong PD [334]
- Li M [332]
- Wu C [332]
- Richey ST [329]
- Chen L [328]
- Turner HL [328]
- Zhou Y [327]
- Zhou J [323]
- Li N [321]
- Zhou L [319]
- Li D [318]
- Zhang W [318]
- Yang H [316]
- Xu HE [315]
- Li T [313]
- Cramer P [311]
- Zhao X [311]
- Montefiori DC [310]
Author by ORCID
- Ward AB [815]
- Zhou ZH [383]
- Torres JL [340]
- Brown A [316]
- Beckmann R [303]
- Chiu W [293]
- Skiniotis G [288]
- Cheng Y [285]
- Rubinstein JL [283]
- Kwong PD [277]
- Ozorowski G [269]
- Gao N [268]
- Cottrell CA [265]
- Lyumkis D [253]
- Klinge S [245]
- Crispin M [239]
- Kobilka BK [218]
- Xu HE [212]
- Amunts A [207]
- Plevka P [206]
- Gao Y [205]
- Li H [202]
- Williamson JR [201]
- Allen JD [199]
- Burton DR [195]
- Gao GF [195]
- Baker D [192]
- Cheng J [189]
- Gmeiner P [188]
- Papasergi-scott MM [188]
- Edwards RJ [188]
- He F [186]
- Copps J [186]
- Zheng Q [185]
- Zeng J [181]
- Kotecha A [180]
- Kishikawa JI [180]
- Nureki O [179]
- Vanden Broeck A [178]
- Van Gils Mj [178]
- Kanekiyo M [176]
- Hurt E [176]
- Fuzik T [174]
- Raunser S [169]
- King NP [169]
- Hilger D [167]
- Bai XC [166]
- Panova O [162]
- Batebi H [160]
- Han J [160]
- Perez-hernandez G [160]
- Hildebrand PW [160]
- Denk T [158]
- Wang X [158]
- Subramaniam S [157]
- Sanders RW [156]
- Itoh Y [154]
- Borgnia MJ [154]
- Zhang K [154]
- Miotto MC [153]
- Greber BJ [152]
- Wilson DN [151]
- Li N [149]
- Zhang X [149]
- Kuhlbrandt W [147]
- Schulman BA [147]
- Gui M [146]
- Xia N [145]
- Du J [144]
- Venugopal H [141]
- Park YJ [141]
- Perrett HR [140]
- Robinson CV [139]
- Sewall LM [139]
- Crotty S [139]
- Xia X [138]
- Hummer G [137]
- Lander GC [137]
- Veesler D [134]
- Hite RK [133]
- Mclellan JS [133]
- Lau B [132]
- Zhang K [131]
- Zhou L [131]
- Yang M [131]
- Sui SF [130]
- Ranson NA [130]
- Zhang Y [130]
- Taylor DW [129]
- Conway JF [129]
- Moeller A [129]
- Yan C [128]
- Li S [128]
- Xiang Y [128]
- Hirst J [127]
- Rao Z [127]
- Wilson IA [127]
- Li S [126]
- Shi Y [126]
- Weninger G [126]
Journal
- NAT COMMUN [7906]
- TO BE PUBLISHED [4217]
- NATURE [4098]
- NAT STRUCT MOL BIOL [2698]
- PNAS [2492]
- SCIENCE [2407]
- CELL [1932]
- BIORXIV [1700]
- MOL CELL [1535]
- SCI ADV [1440]
- ELIFE [1306]
- STRUCTURE [1237]
- CELL REP [1165]
- NUCLEIC ACIDS RES [934]
- CELL RES [636]
- J VIROL [604]
- EMBO J [572]
- COMMUN BIOL [508]
- J BIOL CHEM [452]
- J MOL BIOL [448]
- CELL DISCOV [415]
- PLOS PATHOG [406]
- NAT CHEM BIOL [391]
- ACTA CRYSTALLOGR D STRUCT BIOL [318]
- NAT MICROBIOL [290]
- J STRUCT BIOL [233]
- MBIO [215]
- IMMUNITY [213]
- NAT PLANTS [210]
- SCI REP [195]
- PLOS BIOL [171]
- EMBO REP [167]
- CELL HOST MICROBE [162]
- PROTEIN CELL [152]
- NAT METHODS [146]
- J AM CHEM SOC [138]
- NPJ VACCINES [119]
- SCI TRANSL MED [119]
- PROTEIN SCI [116]
- VIRUSES [110]
- NEURON [98]
- IUCRJ [95]
- PLOS ONE [91]
- INT J MOL SCI [87]
- PNAS NEXUS [77]
- BIOCHEMISTRY [75]
- ISCIENCE [75]
- LIFE SCI ALLIANCE [75]
- J STRUCT BIOL X [73]
- J MED CHEM [70]
- SCI IMMUNOL [66]
- J CELL BIOL [64]
- ACS NANO [57]
- SIGNAL TRANSDUCT TARGET THER [57]
- RES SQ [52]
- INT J BIOL MACROMOL [49]
- VIROLOGY [49]
- RNA [48]
- COMMUN CHEM [47]
- BLOOD [46]
- ANGEW CHEM INT ED ENGL [45]
- BIOMOLECULES [45]
- FEBS J [45]
- ADV SCI [43]
- BIOCHEM BIOPHYS RES COMMUN [43]
- NAT CATAL [43]
- FRONT MOL BIOSCI [42]
- MOL PLANT [41]
- EBIOMEDICINE [38]
- CELL REP METHODS [36]
- GENES DEV [35]
- EMERG MICROBES INFECT [34]
- CURR BIOL [33]
- FEBS LETT [31]
- DEV CELL [29]
- FRONT IMMUNOL [29]
- NAT IMMUNOL [28]
- PLANT COMMUN. [28]
- BIOCHEM J [27]
- NATL SCI REV [27]
- J EXP MED [26]
- J GEN VIROL [26]
- PLANT CELL [26]
- NAT NANOTECHNOL [25]
- ACS CHEM BIOL [24]
- CELL REP MED [23]
- NAT MATER [23]
- CELL DEATH DIFFER. [22]
- HLIFE [22]
- SCI BULL (BEIJING) [22]
- BIOCHIM BIOPHYS ACTA BIOENERG [21]
- J.MOL.CELL.CARDIOL. [21]
- SMALL [21]
- ACS CENT SCI [20]
- ACTA CRYSTALLOGR F STRUCT BIOL COMMUN [20]
- CURR RES STRUCT BIOL [20]
- NAT CHEM [20]
- BIOPHYS J [19]
- NAT BIOMED ENG [19]
- ACS CATAL [18]
Software
- RELION [11688]
- CRYOSPARC [11580]
- CTFFIND [2029]
- GCTF [1007]
- SPIDER [465]
- CISTEM [450]
- CHIMERA [393]
- FREALIGN [366]
- EMAN [316]
- COOT [232]
- EMAN2 [225]
- IMAGIC [143]
- WARP [143]
- JSPR [142]
- XMIPP [136]
- PHENIX [132]
- AUTO3DEM [122]
- UCSF CHIMERA [91]
- SPHIRE [85]
- UCSF CHIMERAX [78]
- EMAN2, SPARX [61]
- SPARX [54]
- CTFFIND3 [53]
- SITUS [48]
- MDFF [41]
- IMAGIC, SPIDER [39]
- SPIDER, APPION [39]
- URO [39]
- APPION, SPIDER [32]
- EMFIT [32]
- CTFFIND3, RELION [31]
- SPIDER, FREALIGN [31]
- SIMPLE [30]
- EM3DR2 [28]
- BSOFT [26]
- EMAN1 [26]
- MPSA [26]
- IMIRS [25]
- CTFFIND4 [24]
- SCIPION [24]
- ISOLDE [23]
- CHIMERA, SITUS [22]
- EMAN2, RELION [22]
- J3DR [22]
- O [22]
- JALIGN [20]
- APPION [19]
- CTFTILT [19]
- EMAN1, EMAN2 [18]
- SPIDER, RELION [18]
- APPION, SPIDER, SPARX, EMAN2 [17]
- MRC [17]
- CHIMERA, COOT [16]
- IMAGIC, CUSTOM, SPIDER [16]
- MULTI-PATH SA [16]
- UNBLUR, CTFFIND4, FREALIGN [16]
- APPION, SPIDER, EMAN [15]
- EMAN, SPIDER [15]
- IMAGIC-5 [15]
- RELION, CTFFIND3 [15]
- CHIMERA, MDFF [14]
- SPIDER, EMAN [14]
- SPIDER, IMAGIC [14]
- CRYODRGN [13]
- IMAGIC-5, SPIDER [13]
- CHIMERA, FLEX-EM [12]
- EMAN2, SPIDER, XMIPP [11]
- GAP [11]
- JSPR, EMAN2, EMAN [11]
- SIGNATURE, CTFFIND3, SPIDER, SPARX [11]
- SPIDER PACKAGE [11]
- SPIDER XMIPP [11]
- EMAN, XMIPP [10]
- EMAN2, RELION, 1.3 [10]
- FOCUS [10]
- FREALIX [10]
- MOTIONCORR2 [10]
- SPARX/EMAN2 [10]
- SPIDER, SPARX [10]
- CRYOLO [9]
- EMAN, FREALIGN [9]
- EMAN2, IMAGIC, FREALIGN, RSAMPLE, CTFFIND3 [9]
- FLEX-EM [9]
- MPSA, EMAN, EMAN2 [9]
- MRC, IMAGIC, SPIDER [9]
- PFT2, EM3DR2 [9]
- SPIDER, EMAN2 [9]
- VEDA [9]
- XMIPP, SPIDER [9]
- EMAN, EMAN2, MPSA [8]
- EMPFT EM3DR [8]
- IMAGIC, FREALIGN [8]
- IMAGIC, SPIDER, EMAN [8]
- IPET [8]
- JSPR, EMAN, EMAN2 [8]
- MOLREP, CHIMERA [8]
- RELION, FREALIGN [8]
- SPIDER, PACKAGE [8]
- XMIPP, FREALIGN [8]
- CHIMERA, PHENIX [7]
Microscope
- FEI TITAN KRIOS [26234]
- TFS KRIOS [7793]
- FEI TALOS ARCTICA [2366]
- TFS GLACIOS [1341]
- FEI TECNAI F20 [1294]
- FEI POLARA 300 [821]
- FEI TECNAI SPIRIT [747]
- FEI TECNAI F30 [534]
- JEOL CRYO ARM 300 [526]
- FEI TITAN [511]
- FEI TECNAI ARCTICA [353]
- FEI TECNAI 12 [240]
- FEI/PHILIPS CM200FEG [230]
- FEI TECNAI 20 [212]
- TFS TALOS [176]
- JEOL 3200FSC [138]
- JEOL 2200FS [119]
- JEOL 2010F [108]
- FEI/PHILIPS CM300FEG/T [84]
- JEOL 2100F [82]
- JEOL CRYO ARM 200 [64]
- TFS TALOS F200C [59]
- TFS TALOS L120C [59]
- JEOL 3200FS [50]
- FEI/PHILIPS EM420 [47]
- JEOL 2100 [47]
- JEOL 1230 [38]
- FEI/PHILIPS CM120T [26]
- TFS TITAN THEMIS [26]
- FEI/PHILIPS CM200T [24]
- JEOL 1200EXII [22]
- FEI MORGAGNI [21]
- JEOL 3000SFF [21]
- OTHER [20]
- FEI/PHILIPS CM200FEG/ST [19]
- TFS TUNDRA [18]
- JEOL 4000 [17]
- JEOL 4000EX [17]
- JEOL 1400 [16]
- JEOL 1200EX [15]
- FEI TECNAI 10 [14]
- FEI/PHILIPS CM300FEG/HE [13]
- ZEISS LIBRA120PLUS [12]
- JEOL 1400/HR YPS FEG [11]
- FEI/PHILIPS CM200FEG/UT [8]
- JEOL 2010 [8]
- JEOL 2200FSC [8]
- JEOL 100CX [7]
- JEOL 3100FFC [7]
- FEI TECNAI SPHERA [5]
- FEI/PHILIPS CM12 [5]
- JEOL 2000EX [5]
- JEOL KYOTO-3000SFF [5]
- FEI/PHILIPS CM10 [4]
- JEOL 1010 [4]
- FEI/PHILIPS CM300FEG/ST [3]
- HITACHI EF2000 [3]
- HITACHI H-9500SD [3]
- JEOL 1000EES [3]
- JEOL 1200 [3]
- JEOL 2010HT [2]
- JEOL 2010UHR [2]
- FEI/PHILIPS CM200FEG/SOPHIE [1]
- FEI/PHILIPS EM400 [1]
- JEOL 2000EXII [1]
- JEOL 2010HC [1]
- JEOL 2011 [1]
Electron Source
- FIELD EMISSION GUN [42953]
- LAB6 [1241]
- OTHER [268]
- TUNGSTEN HAIRPIN [172]
Film or detector model
- GATAN K3 6K X 4K [11862]
- GATAN K2 SUMMIT 4K X 4K [8893]
- GATAN K3 BIOQUANTUM 6K X 4K [8843]
- FEI FALCON IV 4K X 4K [3765]
- FEI FALCON III 4K X 4K [2652]
- GATAN K2 QUANTUM 4K X 4K [1502]
- FEI FALCON II 4K X 4K [1248]
- KODAK SO-163 FILM [928]
- TFS FALCON 4I 4K X 4K [749]
- TVIPS TEMCAM-F416 4K X 4K [740]
- GATAN ULTRASCAN 4000 4K X 4K [594]
- FEI EAGLE 4K X 4K [472]
- OTHER [335]
- GATAN K3 BIOCONTINUUM 6K X 4K [330]
- FEI CETA 4K X 4K [253]
- GATAN K2 BASE 4K X 4K [184]
- GATAN K2 4K X 4K [180]
- TVIPS TEMCAM-F415 4K X 4K [121]
- DIRECT ELECTRON DE-20 5K X 3K [114]
- GENERIC GATAN 4K X 4K [103]
- GENERIC TVIPS 4K X 4K [71]
- FEI FALCON I 4K X 4K [68]
- GENERIC CCD [62]
- FEI EAGLE 2K X 2K [57]
- DIRECT ELECTRON DE-64 8K X 8K [47]
- TVIPS TEMCAM-F816 8K X 8K [41]
- GATAN K2 IS 4K X 4K [35]
- GATAN ULTRASCAN 1000 2K X 2K [33]
- DIRECT ELECTRON APOLLO 4K X 4K [28]
- DIRECT ELECTRON DE-16 4K X 4K [27]
- DIRECT ELECTRON DE-12 4K X 3K [24]
- GENERIC GATAN [24]
- DIRECT ELECTRON DE-10 5K X 4K [21]
- KODAK 4489 FILM [13]
- TVIPS TEMCAM-F224 2K X 2K [12]
- DECTRIS SINGLA 1K X 1K [11]
- GATAN MULTISCAN [10]
- AGFA SCIENTA FILM [9]
- GENERIC FILM [9]
- GENERIC TVIPS [8]
- GATAN ORIUS SC200 2K X 2K [7]
- TVIPS TEMCAM-F216 2K X 2K [7]
- GATAN ULTRASCAN 10000 10K X 10K [6]
- GATAN ALPINE 2.3K X 3.2K [5]
- GENERIC CCD 2K X 2K [5]
- DECTRIS ELA 1K X 0.5K [4]
- GENERIC GATAN 2K X 2K [4]
- SIA 15C 3K X 3K [4]
- GENERIC IMAGE PLATES [3]
- GENERIC TVIPS 2K X 2K [3]
- GATAN ORIUS SC1000 4K X 2.7K [2]
- GATAN ORIUS SC600 2.7K X 2.7K [2]
- DECTRIS ARINA 0.2K X 0.2K [1]
- PROSCAN TEM-PIV 2K X 2K [1]
External links
- UniProt [28795]
- PDB [28034]
- PDBe-Kb [26300]
- AlphaFold DB [24258]
- Pfam [23365]
- Gene Ontology [21993]
- InterPro [21291]
- ChEBI [17106]
- ChEMBL [15437]
- DrugBank [13654]
- Complex Portal [8454]
- EMPIAR [3241]
- SCOP2 [612]
- CATH [372]
