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Current Database
- EMDB [40801]
Current status
- REL [40801]
Sample type
- Protein [40801]
- Complex [34536]
- Ligand [22660]
- RNA [4869]
- DNA [3772]
- Sample [2492]
- Virus [2079]
- Cellular component [1668]
- Cell [403]
- Tissue [264]
- Other [63]
Organism
- Homo sapiens [16802]
- Synthetic construct [3143]
- Mus musculus [2828]
- Escherichia coli [2442]
- Severe acute respiratory syndrome coronavirus [2010]
- Saccharomyces cerevisiae [1736]
- Rattus norvegicus [1116]
- Escherichia coli [922]
- Bos taurus [811]
- Human immunodeficiency virus 1 [743]
- Oryctolagus cuniculus [720]
- Saccharomyces cerevisiae [719]
- Lama glama [653]
- Sus scrofa [641]
- Arabidopsis thaliana [543]
- Xenopus laevis [491]
- Drosophila melanogaster [282]
- Mycolicibacterium smegmatis [257]
- Mycobacterium tuberculosis [228]
- Gallus gallus [218]
- Influenza a virus [207]
- Vicugna pacos [189]
- Macaca mulatta [187]
- Staphylococcus aureus [176]
- Bacillus subtilis [175]
- Danio rerio [174]
- Pseudomonas aeruginosa [161]
- Thermus thermophilus [156]
- Escherichia coli [156]
- Mycobacterium tuberculosis [138]
- Aequorea victoria [117]
- Chaetomium thermophilum [116]
- Chaetomium thermophilum [115]
- Caenorhabditis elegans [114]
- Pseudomonas aeruginosa [113]
- Enterobacteria phage t4 [107]
- Bacillus subtilis [105]
- Chlamydomonas reinhardtii [102]
- Synechocystis sp. pcc 6803 [95]
- Salmonella enterica [94]
- Streptococcus pyogenes [92]
- Ovis aries [88]
- Mycolicibacterium smegmatis [87]
- Plasmodium falciparum [84]
- Vibrio cholerae [81]
- Plasmodium falciparum [79]
- Escherichia virus t7 [77]
- Klebsiella pneumoniae [73]
- Thermus thermophilus [69]
- Enterovirus d [69]
- Clostridioides difficile [67]
- Salmonella enterica [67]
- Dna molecule [66]
- Severe acute respiratory syndrome coronavirus [66]
- Schizosaccharomyces pombe [64]
- Hepatitis b virus [63]
- Tetrahymena thermophila [63]
- Escherichia coli [63]
- Cricetulus griseus [61]
- Geobacillus stearothermophilus [61]
- Monkeypox virus [60]
- Enterobacteria phage t4 [59]
- Spinacia oleracea [59]
- Clostridium botulinum [58]
- Polytomella sp. pringsheim 198.80 [58]
- Adeno-associated virus [57]
- Enterovirus a [55]
- Middle east respiratory syndrome-related coronavirus [54]
- Escherichia phage lambda [54]
- Parengyodontium album [54]
- Amanita phalloides [54]
- Schizosaccharomyces pombe [53]
- African swine fever virus [52]
- Dengue virus [51]
- Legionella pneumophila [51]
- (no species) [49]
- Aquifex aeolicus [49]
- Saccharolobus solfataricus [49]
- Oryza sativa [49]
- Acinetobacter baumannii [49]
- Canis lupus [49]
- Human coronavirus hku1 [46]
- Human cytomegalovirus [45]
- Mycoplasma pneumoniae [45]
- Meiothermus taiwanensis [43]
- Epstein-barr virus (strain gd1) [42]
- Human immunodeficiency virus [42]
- Methanothermobacter marburgensis [41]
- Spodoptera frugiperda [41]
- Thermotoga maritima [40]
- Porcine epidemic diarrhea virus [40]
- Trypanosoma brucei [40]
- Potato virus y [39]
- Sus scrofa [39]
- Human herpesvirus 1 [38]
- Saccharomyces cerevisiae [38]
- Streptococcus pneumoniae [38]
- Pyrococcus furiosus [37]
- Methanococcus maripaludis [37]
- Escherichia coli [37]
EM Method
- Single-particle [37521]
- Helical reconstruction [2376]
- Subtomogram averaging [659]
- Electron Crystallography [175]
- Tomography [70]
Resolution
- < 2Å [380]
- ≥ 2Å and < 3Å [10629]
- ≥ 3Å and < 4Å [20076]
- ≥ 4Å and < 5Å [4102]
- ≥ 5Å and < 6Å [774]
- ≥ 6Å and < 8Å [1499]
- ≥ 8Å and < 12Å [1128]
- ≥ 12Å and < 16Å [437]
- ≥ 16Å and < 20Å [401]
- ≥ 20Å and < 30Å [857]
- ≥ 30Å [364]
Model molecular weight
- 0-50 kDa [753]
- 50-100 kDa [2272]
- 100-250 kDa [10644]
- 250-500 kDa [8652]
- 500-1000 kDa [4803]
- 1-2 MDa [2186]
- 2-5 MDa [2246]
- 5-10 MDa [623]
- > 10 MDa [427]
Release Date
- 2026 [5630]
- 2025 [7748]
- 2024 [6355]
- 2023 [5051]
- 2022 [4336]
- 2021 [3180]
- 2020 [2547]
- 2019 [1520]
- 2018 [987]
- 2017 [627]
- 2016 [654]
- 2015 [472]
- 2014 [433]
- 2013 [352]
- 2012 [256]
- 2011 [138]
- 2010 [131]
- 2009 [111]
- 2008 [32]
- 2007 [67]
- 2006 [98]
- 2005 [21]
- 2004 [23]
- 2003 [32]
Author by name
- Zhang Y [1499]
- Wang Y [1422]
- Wang X [1153]
- Zhang X [1127]
- Li Y [1122]
- Wang J [1081]
- Li X [943]
- Li Z [932]
- Liu Y [892]
- Zhang Z [814]
- Wang L [752]
- Gao Y [742]
- Zhang J [735]
- Li J [732]
- Li S [701]
- Li H [684]
- Chen Y [683]
- Ward AB [682]
- Zhang L [660]
- Chen X [646]
- Zhang H [590]
- Liu C [589]
- Wang Q [562]
- Liu S [559]
- Li D [551]
- Zhang S [551]
- Liu Z [550]
- Liu J [547]
- Wang H [545]
- Wang C [533]
- Chen Z [521]
- Xu Y [511]
- Shi Y [503]
- Chen J [483]
- Liu L [474]
- Liu X [471]
- Yang Y [456]
- Jiang Y [445]
- Zhao Y [441]
- Wang S [438]
- Zhang K [433]
- Zhu Y [428]
- Wang Z [411]
- Huang Y [396]
- Zhao J [395]
- Wang W [390]
- Zhang C [386]
- Yang X [385]
- Wang M [384]
- Liu H [377]
- Wang F [376]
- Li W [363]
- Zhou Y [357]
- Liu B [353]
- Xu C [352]
- Li M [351]
- Zhang B [348]
- Xu HE [346]
- Wang P [338]
- Zhang W [337]
- Xu J [334]
- Yang H [333]
- Cheng Y [321]
- Yu X [320]
- Beckmann R [312]
- Chen L [312]
- Zhou ZH [311]
- Cheng J [309]
- Huang J [309]
- Rao Z [309]
- Zhang Q [309]
- Zhang M [307]
- Chen Q [306]
- Wu Y [306]
- Chen H [304]
- Sun Y [304]
- Zhou Q [304]
- Kotecha A [301]
- Yang J [301]
- Wu J [296]
- Zhao X [295]
- Du J [292]
- Yang F [292]
- Lu Y [288]
- Skiniotis G [288]
- Sun L [286]
- Zhang P [285]
- Li L [282]
- Kwong PD [281]
- Zhou J [280]
- Nureki O [279]
- Huang X [277]
- He Y [270]
- Yang Z [268]
- Zhu X [268]
- Sun J [267]
- Scheres SHW [265]
- He J [263]
- Yang W [263]
- Wu C [259]
Author by ORCID
- Ward AB [304]
- Kotecha A [284]
- Skiniotis G [265]
- Xu HE [246]
- Cheng Y [241]
- Kobilka BK [234]
- Kwong PD [225]
- Raunser S [204]
- Subramaniam S [194]
- Rubinstein JL [193]
- Baker D [191]
- Gmeiner P [188]
- Scheres SHW [183]
- Du J [180]
- Papasergi-scott MM [180]
- Gao Y [178]
- Gao GF [172]
- Cottrell CA [171]
- Nureki O [170]
- He F [169]
- Zhou ZH [169]
- Hilger D [166]
- Gao N [166]
- Beckmann R [164]
- Li H [162]
- Borgnia MJ [159]
- Batebi H [159]
- Panova O [159]
- Perez-hernandez G [159]
- Hildebrand PW [159]
- Edwards RJ [158]
- Henderson R [156]
- Chiu W [156]
- Lander GC [154]
- Lu W [153]
- Bai XC [153]
- Plevka P [153]
- Stahlberg H [147]
- Ranson NA [147]
- Crispin M [145]
- Fuzik T [144]
- Zhang K [138]
- Hummer G [137]
- Park YJ [137]
- Yamashita K [136]
- Greber BJ [132]
- Sobolevsky AI [131]
- Goedert M [131]
- Wang X [131]
- Xiong X [130]
- Briggs JAG [130]
- Steyaert J [126]
- Kuhlbrandt W [125]
- Robinson CV [124]
- Zhang P [124]
- Zhang Y [123]
- Egelman EH [123]
- King NP [122]
- Veesler D [122]
- Yang D [122]
- Allen JD [121]
- Zheng Q [119]
- Lee SY [117]
- Huiskonen JT [115]
- Cheng J [115]
- Leschziner AE [112]
- Korostelev AA [112]
- Wilson DN [112]
- Schoehn G [111]
- Torres JL [111]
- Amunts A [110]
- Mclellan JS [110]
- Yan C [109]
- Rao Z [109]
- Sachse C [109]
- Zhao Y [109]
- Bottcher B [109]
- Venugopal H [108]
- Cramer P [108]
- Wang MW [108]
- He X [107]
- Chai P [107]
- Acharya P [107]
- Taylor DW [107]
- Wang F [107]
- Moeller A [107]
- Pardon E [105]
- Qi J [105]
- Shirouzu M [104]
- Chipman P [104]
- Hite RK [101]
- Mills DJ [101]
- Novacek J [101]
- Sun JP [100]
- Kollman JM [98]
- Aricescu AR [98]
- Furukawa H [97]
- Grigorieff N [97]
- Gorman J [97]
- Cusack S [97]
Journal
- NAT COMMUN [7990]
- TO BE PUBLISHED [4041]
- NATURE [3525]
- NAT STRUCT MOL BIOL [2469]
- PNAS [2447]
- BIORXIV [1818]
- SCIENCE [1663]
- SCI ADV [1536]
- CELL [1513]
- MOL CELL [1321]
- ELIFE [1233]
- STRUCTURE [1083]
- CELL REP [840]
- NUCLEIC ACIDS RES [806]
- CELL RES [594]
- COMMUN BIOL [518]
- EMBO J [518]
- NAT CHEM BIOL [454]
- J MOL BIOL [436]
- J BIOL CHEM [424]
- CELL DISCOV [396]
- PLOS PATHOG [363]
- J VIROL [351]
- ACTA CRYSTALLOGR D STRUCT BIOL [296]
- NAT MICROBIOL [280]
- J STRUCT BIOL [169]
- SCI REP [167]
- NAT PLANTS [161]
- PROTEIN SCI [160]
- J AM CHEM SOC [157]
- PLOS BIOL [154]
- MBIO [150]
- IMMUNITY [147]
- CELL HOST MICROBE [146]
- PROTEIN CELL [117]
- NEURON [111]
- EMBO REP [108]
- VIRUSES [103]
- J MED CHEM [86]
- NAT METHODS [84]
- J CELL BIOL [82]
- LIFE SCI ALLIANCE [82]
- IUCRJ [79]
- ISCIENCE [78]
- BIOCHEMISTRY [72]
- COMMUN CHEM [72]
- ADV SCI [71]
- PLOS ONE [66]
- INT J MOL SCI [65]
- RES SQ [62]
- SCI TRANSL MED [62]
- BIOCHEM BIOPHYS RES COMMUN [60]
- ACTA NEUROPATHOL [57]
- J STRUCT BIOL X [56]
- ANGEW CHEM INT ED ENGL [54]
- PNAS NEXUS [54]
- SIGNAL TRANSDUCT TARGET THER [54]
- SCI IMMUNOL [51]
- INT J BIOL MACROMOL [49]
- BLOOD [47]
- NPJ VACCINES [43]
- PLANT CELL [39]
- NAT CATAL [38]
- DEV CELL [37]
- FEBS J [37]
- GENES DEV [33]
- VITA [33]
- BIOCHEM J [31]
- NAT CHEM [31]
- PLANT COMMUN. [31]
- MOL PLANT [29]
- CELL REP MED [28]
- FEBS LETT [28]
- ACS NANO [27]
- BIOMOLECULES [27]
- NAT NEUROSCI [27]
- RNA [26]
- NATL SCI REV [25]
- SCI SIGNAL [25]
- BIOCHIM BIOPHYS ACTA BIOENERG [23]
- EMERG MICROBES INFECT [23]
- J.MOL.CELL.CARDIOL. [23]
- ACS CHEM BIOL [22]
- J EXP MED [22]
- ACTA PHARMACOL.SIN. [21]
- NAT CELL BIOL [21]
- OPEN BIOL [21]
- CELL CHEM BIOL [20]
- FRONT IMMUNOL [20]
- HLIFE [20]
- ACTA CRYSTALLOGR F STRUCT BIOL COMMUN [19]
- CURR BIOL [19]
- SCI BULL (BEIJING) [19]
- ACS CATAL [18]
- MICROBIOL SPECTR [18]
- MOL MICROBIOL [17]
- NAT IMMUNOL [17]
- ACS CENT SCI [16]
- COMMUN MATER [16]
- MOL PHARMACOL [16]
Software
- CRYOSPARC [12485]
- RELION [10008]
- CTFFIND [1532]
- GCTF [773]
- CISTEM [424]
- SPIDER [417]
- CHIMERA [390]
- PHENIX [340]
- COOT [319]
- FREALIGN [307]
- WARP [234]
- UCSF CHIMERAX [216]
- EMAN [187]
- EMAN2 [173]
- UCSF CHIMERA [154]
- IMOD [125]
- IMAGIC [116]
- SPHIRE [105]
- DYNAMO [96]
- CRYOLO [94]
- JSPR [89]
- AV3 [66]
- MATLAB [66]
- XMIPP [63]
- EMAN2, SPARX [61]
- TOM TOOLBOX [49]
- SPARX [48]
- AIMLESS [46]
- SITUS [46]
- IMAGIC, SPIDER [41]
- AUTO3DEM [38]
- SPIDER, FREALIGN [37]
- SIMPLE [34]
- MDFF [33]
- TOM [33]
- APPION, SPIDER [32]
- ISOLDE [29]
- MRC [29]
- URO [29]
- IHRSR [27]
- CTFPHASEFLIP [26]
- EMAN1 [26]
- PYTOM [26]
- NOVACTF [25]
- CHIMERA, SITUS [24]
- SPIDER, APPION [22]
- EMAN2, RELION [20]
- SUBTOM [20]
- CTFFIND4 [19]
- SPRING [19]
- CHIMERA, MDFF [18]
- EMAN1, EMAN2 [18]
- MOLREP [18]
- APPION, SPIDER, SPARX, EMAN2 [17]
- EMCLARITY [17]
- PEET [17]
- SPIDER, RELION [17]
- CHIMERA, COOT [16]
- CTFFIND3, RELION [16]
- MOTIONCORR2 [16]
- O [16]
- POINTLESS [16]
- UNBLUR, CTFFIND4, FREALIGN [16]
- COMET [15]
- CTFFIND3 [15]
- FREALIX [15]
- TOPAZ [15]
- CHIMERA, FLEX-EM [14]
- EMFIT [14]
- IMAGIC-5 [14]
- SCIPION [14]
- SPIDER, IMAGIC [14]
- BSOFT [13]
- DIREX [13]
- EMREADY [13]
- PHASER [13]
- PHOELIX, SUPRIM [13]
- REFMAC [13]
- AMIRA [12]
- IMAGIC-5, SPIDER [12]
- IMOD, TOMO3D [12]
- PHOELIX [12]
- SPARX/EMAN2 [12]
- EMAN, SPIDER [11]
- MPSA [11]
- SPIDER, EMAN [11]
- TOMO3D [11]
- XSCALE [11]
- APPION [10]
- EMAN, XMIPP [10]
- EMAN2, RELION, 1.3 [10]
- SPIDER, EMAN2 [10]
- SPIDER, IHRSR [10]
- EMAN1, FREALIGN [9]
- EMAN2/SPARX [9]
- FLEX-EM [9]
- FOCUS [9]
- GAP [9]
- MRC, IMAGIC, SPIDER [9]
- PROTOMO [9]
Microscope
- FEI TITAN KRIOS [21605]
- TFS KRIOS [10623]
- FEI TALOS ARCTICA [2117]
- TFS GLACIOS [1442]
- FEI TECNAI F20 [913]
- FEI POLARA 300 [823]
- JEOL CRYO ARM 300 [607]
- FEI TECNAI F30 [404]
- FEI TITAN [316]
- FEI TECNAI ARCTICA [302]
- FEI TECNAI SPIRIT [183]
- FEI TECNAI 12 [182]
- TFS TALOS [155]
- FEI TECNAI 20 [148]
- FEI/PHILIPS CM200FEG [135]
- JEOL 3200FSC [107]
- JEOL CRYO ARM 200 [72]
- JEOL 2010F [70]
- FEI/PHILIPS CM300FEG/T [45]
- FEI MORGAGNI [43]
- JEOL 2200FS [43]
- JEOL 2100F [40]
- JEOL 1230 [37]
- JEOL 2100 [29]
- JEOL 3200FS [27]
- TFS TITAN THEMIS [25]
- FEI/PHILIPS CM120T [22]
- JEOL 4000EX [22]
- TFS TALOS L120C [22]
- JEOL 3000SFF [21]
- JEOL KYOTO-3000SFF [21]
- JEOL 1200EXII [19]
- OTHER [19]
- FEI TECNAI 10 [15]
- FEI/PHILIPS CM200FEG/ST [15]
- TFS TALOS F200C [15]
- FEI/PHILIPS EM420 [14]
- FEI/PHILIPS CM300FEG/HE [13]
- JEOL 1200EX [13]
- JEOL 1400 [12]
- JEOL 1400/HR YPS FEG [11]
- FEI/PHILIPS CM200T [9]
- FEI/PHILIPS CM200FEG/UT [7]
- ZEISS LIBRA120PLUS [7]
- FEI/PHILIPS CM12 [6]
- JEOL 2000EX [6]
- JEOL 2200FSC [6]
- JEOL 100CX [5]
- JEOL 2010 [5]
- FEI TECNAI SPHERA [4]
- FEI/PHILIPS CM10 [3]
- FEI/PHILIPS CM300FEG/ST [3]
- HITACHI H-9500SD [3]
- JEOL 1010 [3]
- JEOL 3100FFC [3]
- SHUIMU TOTEM 300S [3]
- TFS TUNDRA [3]
- JEOL 2010HC [2]
- JEOL 2010HT [2]
- JEOL 2010UHR [2]
- HITACHI EF2000 [1]
- HITACHI H7600 [1]
- JEOL 1200 [1]
- JEOL 2000EXII [1]
- JEOL 2011 [1]
- ZEISS LEO912 [1]
Electron Source
- FIELD EMISSION GUN [39846]
- LAB6 [509]
- OTHER [292]
- TUNGSTEN HAIRPIN [155]
Film or detector model
- GATAN K3 6K X 4K [11771]
- GATAN K3 BIOQUANTUM 6K X 4K [8093]
- GATAN K2 SUMMIT 4K X 4K [7481]
- FEI FALCON IV 4K X 4K [4398]
- FEI FALCON III 4K X 4K [2165]
- GATAN K2 QUANTUM 4K X 4K [1375]
- TFS FALCON 4I 4K X 4K [1045]
- FEI FALCON II 4K X 4K [916]
- KODAK SO-163 FILM [626]
- GATAN K3 BIOCONTINUUM 6K X 4K [563]
- GATAN ULTRASCAN 4000 4K X 4K [486]
- TVIPS TEMCAM-F416 4K X 4K [386]
- GATAN K2 4K X 4K [179]
- GATAN K2 BASE 4K X 4K [164]
- OTHER [128]
- FEI EAGLE 4K X 4K [110]
- TVIPS TEMCAM-F415 4K X 4K [105]
- GENERIC GATAN 4K X 4K [89]
- FEI CETA 4K X 4K [86]
- FEI FALCON I 4K X 4K [66]
- GENERIC CCD [65]
- DIRECT ELECTRON DE-20 5K X 3K [57]
- TVIPS TEMCAM-F816 8K X 8K [43]
- GENERIC GATAN [33]
- GENERIC TVIPS 4K X 4K [32]
- DIRECT ELECTRON DE-64 8K X 8K [30]
- DIRECT ELECTRON APOLLO 4K X 4K [29]
- GATAN MULTISCAN [26]
- GATAN K2 IS 4K X 4K [25]
- DIRECT ELECTRON DE-16 4K X 4K [24]
- FEI EAGLE 2K X 2K [23]
- GATAN ULTRASCAN 1000 2K X 2K [23]
- DIRECT ELECTRON DE-10 5K X 4K [21]
- DIRECT ELECTRON DE-12 4K X 3K [15]
- TVIPS TEMCAM-F224 2K X 2K [15]
- DECTRIS SINGLA 1K X 1K [12]
- KODAK 4489 FILM [10]
- AGFA SCIENTA FILM [9]
- GENERIC FILM [8]
- GENERIC GATAN 2K X 2K [8]
- GATAN ORIUS SC200 2K X 2K [5]
- GENERIC TVIPS [5]
- GATAN ULTRASCAN 10000 10K X 10K [3]
- GENERIC IMAGE PLATES [3]
- GENERIC TVIPS 2K X 2K [3]
- GATAN ORIUS SC600 2.7K X 2.7K [2]
- SIA 15C 3K X 3K [2]
- DECTRIS ARINA 0.2K X 0.2K [1]
- PROSCAN TEM-PIV 2K X 2K [1]
External links
- PDB [38428]
- UniProt [34507]
- PDBe-Kb [31857]
- AlphaFold DB [30930]
- InterPro [26434]
- Gene Ontology [25738]
- Pfam [23681]
- ChEBI [19239]
- ChEMBL [17489]
- DrugBank [15427]
- Complex Portal [9624]
- EMPIAR [3660]
- SCOP2 [585]
- CATH [409]
CryoEM
Q-score:
0.458
Similar entry percentile: 22%
Similar entry percentile: 22%
Lee H, Luengo-Woods S, Zhang J, Makarova KS, Wolf YI, Chiu C, Evans SA, Chen J, Xiao H, Feng L, Koonin EV, Gao A
Nature (2026) [ Pubmed: 42527607 DOI: doi:10.1038/s41586-026-10852-6 ]
CryoEM
Q-score:
0.461
Similar entry percentile: 71%
Similar entry percentile: 71%
Lee H, Luengo-Woods S, Zhang J, Makarova KS, Wolf YI, Chiu C, Evans SA, Chen J, Xiao H, Feng L, Koonin EV, Gao A
Nature (2026) [ Pubmed: 42527607 DOI: doi:10.1038/s41586-026-10852-6 ]
CryoEM
Q-score:
0.279
Similar entry percentile: 9%
Similar entry percentile: 9%
Xie J, Fu TM
To Be Published
Composite map
CryoEM
Q-score:
0.466
Similar entry percentile: 38%
Similar entry percentile: 38%
Zimmerman MI, Jecrois A
To Be Published
CryoEM
Q-score:
0.689
Similar entry percentile: 86%
Similar entry percentile: 86%
Gu X, Rowheder PJ, Yu Z, Mohapatra A, Lun S, Jiang X, Li D, Yan NL, Detomasi TC, Pomares DFT, Chen Y, Gestwicki JE, Lin G, Bishai WR, Ernst JD, Cheng Y, Craik CS, Sello JK
ACS Chem Biol (2026) [ DOI: doi:10.1021/acschembio.6c00448 ]
CryoEM
Q-score:
0.375
Similar entry percentile: 25%
Similar entry percentile: 25%
Nadenoen T, Vanden Broeck A
To Be Published
CryoEM
Q-score:
0.371
Similar entry percentile: 30%
Similar entry percentile: 30%
Nadenoen T, Vanden Broeck A
To Be Published
CryoEM
Q-score:
0.307
Similar entry percentile: 6%
Similar entry percentile: 6%
Gonzalez-Prada JE, Liu S, Shang C, Chernoff CS, Bright DP, Mortensen M, Jones CF, Nestorow S, Kasaragod VB, Chen WN, Hannan S, Zhou J, Dunn AWE, Soltani A, Turner RJ, Duggan NM, Yuan Y, Wahid AA, Hardwick SW, Scott S, Chirgadze DY, Pardon E, Steyaert J, Aricescu AR, Paulsen O, Belin D, Smart TG, Miller PS
Sci Adv (2026) 12 pp. eaeg3548-eaeg3548 [ DOI: doi:10.1126/sciadv.aeg3548 Pubmed: 42525743 ]
CryoEM
Q-score:
0.547
Similar entry percentile: 58%
Similar entry percentile: 58%
Gonzalez-Prada JE, Liu S, Shang C, Chernoff CS, Bright DP, Mortensen M, Jones CF, Nestorow S, Kasaragod VB, Chen WN, Hannan S, Zhou J, Dunn AWE, Soltani A, Turner RJ, Duggan NM, Yuan Y, Wahid AA, Hardwick SW, Scott S, Chirgadze DY, Pardon E, Steyaert J, Aricescu AR, Paulsen O, Belin D, Smart TG, Miller PS
Sci Adv (2026) 12 pp. eaeg3548-eaeg3548 [ DOI: doi:10.1126/sciadv.aeg3548 Pubmed: 42525743 ]
CryoEM
Q-score:
0.518
Similar entry percentile: 60%
Similar entry percentile: 60%
Gonzalez-Prada JE, Liu S, Shang C, Chernoff CS, Bright DP, Mortensen M, Jones CF, Nestorow S, Kasaragod VB, Chen WN, Hannan S, Zhou J, Dunn AWE, Soltani A, Turner RJ, Duggan NM, Yuan Y, Wahid AA, Hardwick SW, Scott S, Chirgadze DY, Pardon E, Steyaert J, Aricescu AR, Paulsen O, Belin D, Smart TG, Miller PS
Sci Adv (2026) 12 pp. eaeg3548-eaeg3548 [ DOI: doi:10.1126/sciadv.aeg3548 Pubmed: 42525743 ]
Filter By
Current Database
- EMDB [40801]
Current status
- REL [40801]
Sample type
- Protein [40801]
- Complex [34536]
- Ligand [22660]
- RNA [4869]
- DNA [3772]
- Sample [2492]
- Virus [2079]
- Cellular component [1668]
- Cell [403]
- Tissue [264]
- Other [63]
Organism
- Homo sapiens [16802]
- Synthetic construct [3143]
- Mus musculus [2828]
- Escherichia coli [2442]
- Severe acute respiratory syndrome coronavirus [2010]
- Saccharomyces cerevisiae [1736]
- Rattus norvegicus [1116]
- Escherichia coli [922]
- Bos taurus [811]
- Human immunodeficiency virus 1 [743]
- Oryctolagus cuniculus [720]
- Saccharomyces cerevisiae [719]
- Lama glama [653]
- Sus scrofa [641]
- Arabidopsis thaliana [543]
- Xenopus laevis [491]
- Drosophila melanogaster [282]
- Mycolicibacterium smegmatis [257]
- Mycobacterium tuberculosis [228]
- Gallus gallus [218]
- Influenza a virus [207]
- Vicugna pacos [189]
- Macaca mulatta [187]
- Staphylococcus aureus [176]
- Bacillus subtilis [175]
- Danio rerio [174]
- Pseudomonas aeruginosa [161]
- Thermus thermophilus [156]
- Escherichia coli [156]
- Mycobacterium tuberculosis [138]
- Aequorea victoria [117]
- Chaetomium thermophilum [116]
- Chaetomium thermophilum [115]
- Caenorhabditis elegans [114]
- Pseudomonas aeruginosa [113]
- Enterobacteria phage t4 [107]
- Bacillus subtilis [105]
- Chlamydomonas reinhardtii [102]
- Synechocystis sp. pcc 6803 [95]
- Salmonella enterica [94]
- Streptococcus pyogenes [92]
- Ovis aries [88]
- Mycolicibacterium smegmatis [87]
- Plasmodium falciparum [84]
- Vibrio cholerae [81]
- Plasmodium falciparum [79]
- Escherichia virus t7 [77]
- Klebsiella pneumoniae [73]
- Thermus thermophilus [69]
- Enterovirus d [69]
- Clostridioides difficile [67]
- Salmonella enterica [67]
- Dna molecule [66]
- Severe acute respiratory syndrome coronavirus [66]
- Schizosaccharomyces pombe [64]
- Hepatitis b virus [63]
- Tetrahymena thermophila [63]
- Escherichia coli [63]
- Cricetulus griseus [61]
- Geobacillus stearothermophilus [61]
- Monkeypox virus [60]
- Enterobacteria phage t4 [59]
- Spinacia oleracea [59]
- Clostridium botulinum [58]
- Polytomella sp. pringsheim 198.80 [58]
- Adeno-associated virus [57]
- Enterovirus a [55]
- Middle east respiratory syndrome-related coronavirus [54]
- Escherichia phage lambda [54]
- Parengyodontium album [54]
- Amanita phalloides [54]
- Schizosaccharomyces pombe [53]
- African swine fever virus [52]
- Dengue virus [51]
- Legionella pneumophila [51]
- (no species) [49]
- Aquifex aeolicus [49]
- Saccharolobus solfataricus [49]
- Oryza sativa [49]
- Acinetobacter baumannii [49]
- Canis lupus [49]
- Human coronavirus hku1 [46]
- Human cytomegalovirus [45]
- Mycoplasma pneumoniae [45]
- Meiothermus taiwanensis [43]
- Epstein-barr virus (strain gd1) [42]
- Human immunodeficiency virus [42]
- Methanothermobacter marburgensis [41]
- Spodoptera frugiperda [41]
- Thermotoga maritima [40]
- Porcine epidemic diarrhea virus [40]
- Trypanosoma brucei [40]
- Potato virus y [39]
- Sus scrofa [39]
- Human herpesvirus 1 [38]
- Saccharomyces cerevisiae [38]
- Streptococcus pneumoniae [38]
- Pyrococcus furiosus [37]
- Methanococcus maripaludis [37]
- Escherichia coli [37]
EM Method
- Single-particle [37521]
- Helical reconstruction [2376]
- Subtomogram averaging [659]
- Electron Crystallography [175]
- Tomography [70]
Resolution
- < 2Å [380]
- ≥ 2Å and < 3Å [10629]
- ≥ 3Å and < 4Å [20076]
- ≥ 4Å and < 5Å [4102]
- ≥ 5Å and < 6Å [774]
- ≥ 6Å and < 8Å [1499]
- ≥ 8Å and < 12Å [1128]
- ≥ 12Å and < 16Å [437]
- ≥ 16Å and < 20Å [401]
- ≥ 20Å and < 30Å [857]
- ≥ 30Å [364]
Model molecular weight
- 0-50 kDa [753]
- 50-100 kDa [2272]
- 100-250 kDa [10644]
- 250-500 kDa [8652]
- 500-1000 kDa [4803]
- 1-2 MDa [2186]
- 2-5 MDa [2246]
- 5-10 MDa [623]
- > 10 MDa [427]
Release Date
- 2026 [5630]
- 2025 [7748]
- 2024 [6355]
- 2023 [5051]
- 2022 [4336]
- 2021 [3180]
- 2020 [2547]
- 2019 [1520]
- 2018 [987]
- 2017 [627]
- 2016 [654]
- 2015 [472]
- 2014 [433]
- 2013 [352]
- 2012 [256]
- 2011 [138]
- 2010 [131]
- 2009 [111]
- 2008 [32]
- 2007 [67]
- 2006 [98]
- 2005 [21]
- 2004 [23]
- 2003 [32]
Author by name
- Zhang Y [1499]
- Wang Y [1422]
- Wang X [1153]
- Zhang X [1127]
- Li Y [1122]
- Wang J [1081]
- Li X [943]
- Li Z [932]
- Liu Y [892]
- Zhang Z [814]
- Wang L [752]
- Gao Y [742]
- Zhang J [735]
- Li J [732]
- Li S [701]
- Li H [684]
- Chen Y [683]
- Ward AB [682]
- Zhang L [660]
- Chen X [646]
- Zhang H [590]
- Liu C [589]
- Wang Q [562]
- Liu S [559]
- Li D [551]
- Zhang S [551]
- Liu Z [550]
- Liu J [547]
- Wang H [545]
- Wang C [533]
- Chen Z [521]
- Xu Y [511]
- Shi Y [503]
- Chen J [483]
- Liu L [474]
- Liu X [471]
- Yang Y [456]
- Jiang Y [445]
- Zhao Y [441]
- Wang S [438]
- Zhang K [433]
- Zhu Y [428]
- Wang Z [411]
- Huang Y [396]
- Zhao J [395]
- Wang W [390]
- Zhang C [386]
- Yang X [385]
- Wang M [384]
- Liu H [377]
- Wang F [376]
- Li W [363]
- Zhou Y [357]
- Liu B [353]
- Xu C [352]
- Li M [351]
- Zhang B [348]
- Xu HE [346]
- Wang P [338]
- Zhang W [337]
- Xu J [334]
- Yang H [333]
- Cheng Y [321]
- Yu X [320]
- Beckmann R [312]
- Chen L [312]
- Zhou ZH [311]
- Cheng J [309]
- Huang J [309]
- Rao Z [309]
- Zhang Q [309]
- Zhang M [307]
- Chen Q [306]
- Wu Y [306]
- Chen H [304]
- Sun Y [304]
- Zhou Q [304]
- Kotecha A [301]
- Yang J [301]
- Wu J [296]
- Zhao X [295]
- Du J [292]
- Yang F [292]
- Lu Y [288]
- Skiniotis G [288]
- Sun L [286]
- Zhang P [285]
- Li L [282]
- Kwong PD [281]
- Zhou J [280]
- Nureki O [279]
- Huang X [277]
- He Y [270]
- Yang Z [268]
- Zhu X [268]
- Sun J [267]
- Scheres SHW [265]
- He J [263]
- Yang W [263]
- Wu C [259]
Author by ORCID
- Ward AB [304]
- Kotecha A [284]
- Skiniotis G [265]
- Xu HE [246]
- Cheng Y [241]
- Kobilka BK [234]
- Kwong PD [225]
- Raunser S [204]
- Subramaniam S [194]
- Rubinstein JL [193]
- Baker D [191]
- Gmeiner P [188]
- Scheres SHW [183]
- Du J [180]
- Papasergi-scott MM [180]
- Gao Y [178]
- Gao GF [172]
- Cottrell CA [171]
- Nureki O [170]
- He F [169]
- Zhou ZH [169]
- Hilger D [166]
- Gao N [166]
- Beckmann R [164]
- Li H [162]
- Borgnia MJ [159]
- Batebi H [159]
- Panova O [159]
- Perez-hernandez G [159]
- Hildebrand PW [159]
- Edwards RJ [158]
- Henderson R [156]
- Chiu W [156]
- Lander GC [154]
- Lu W [153]
- Bai XC [153]
- Plevka P [153]
- Stahlberg H [147]
- Ranson NA [147]
- Crispin M [145]
- Fuzik T [144]
- Zhang K [138]
- Hummer G [137]
- Park YJ [137]
- Yamashita K [136]
- Greber BJ [132]
- Sobolevsky AI [131]
- Goedert M [131]
- Wang X [131]
- Xiong X [130]
- Briggs JAG [130]
- Steyaert J [126]
- Kuhlbrandt W [125]
- Robinson CV [124]
- Zhang P [124]
- Zhang Y [123]
- Egelman EH [123]
- King NP [122]
- Veesler D [122]
- Yang D [122]
- Allen JD [121]
- Zheng Q [119]
- Lee SY [117]
- Huiskonen JT [115]
- Cheng J [115]
- Leschziner AE [112]
- Korostelev AA [112]
- Wilson DN [112]
- Schoehn G [111]
- Torres JL [111]
- Amunts A [110]
- Mclellan JS [110]
- Yan C [109]
- Rao Z [109]
- Sachse C [109]
- Zhao Y [109]
- Bottcher B [109]
- Venugopal H [108]
- Cramer P [108]
- Wang MW [108]
- He X [107]
- Chai P [107]
- Acharya P [107]
- Taylor DW [107]
- Wang F [107]
- Moeller A [107]
- Pardon E [105]
- Qi J [105]
- Shirouzu M [104]
- Chipman P [104]
- Hite RK [101]
- Mills DJ [101]
- Novacek J [101]
- Sun JP [100]
- Kollman JM [98]
- Aricescu AR [98]
- Furukawa H [97]
- Grigorieff N [97]
- Gorman J [97]
- Cusack S [97]
Journal
- NAT COMMUN [7990]
- TO BE PUBLISHED [4041]
- NATURE [3525]
- NAT STRUCT MOL BIOL [2469]
- PNAS [2447]
- BIORXIV [1818]
- SCIENCE [1663]
- SCI ADV [1536]
- CELL [1513]
- MOL CELL [1321]
- ELIFE [1233]
- STRUCTURE [1083]
- CELL REP [840]
- NUCLEIC ACIDS RES [806]
- CELL RES [594]
- COMMUN BIOL [518]
- EMBO J [518]
- NAT CHEM BIOL [454]
- J MOL BIOL [436]
- J BIOL CHEM [424]
- CELL DISCOV [396]
- PLOS PATHOG [363]
- J VIROL [351]
- ACTA CRYSTALLOGR D STRUCT BIOL [296]
- NAT MICROBIOL [280]
- J STRUCT BIOL [169]
- SCI REP [167]
- NAT PLANTS [161]
- PROTEIN SCI [160]
- J AM CHEM SOC [157]
- PLOS BIOL [154]
- MBIO [150]
- IMMUNITY [147]
- CELL HOST MICROBE [146]
- PROTEIN CELL [117]
- NEURON [111]
- EMBO REP [108]
- VIRUSES [103]
- J MED CHEM [86]
- NAT METHODS [84]
- J CELL BIOL [82]
- LIFE SCI ALLIANCE [82]
- IUCRJ [79]
- ISCIENCE [78]
- BIOCHEMISTRY [72]
- COMMUN CHEM [72]
- ADV SCI [71]
- PLOS ONE [66]
- INT J MOL SCI [65]
- RES SQ [62]
- SCI TRANSL MED [62]
- BIOCHEM BIOPHYS RES COMMUN [60]
- ACTA NEUROPATHOL [57]
- J STRUCT BIOL X [56]
- ANGEW CHEM INT ED ENGL [54]
- PNAS NEXUS [54]
- SIGNAL TRANSDUCT TARGET THER [54]
- SCI IMMUNOL [51]
- INT J BIOL MACROMOL [49]
- BLOOD [47]
- NPJ VACCINES [43]
- PLANT CELL [39]
- NAT CATAL [38]
- DEV CELL [37]
- FEBS J [37]
- GENES DEV [33]
- VITA [33]
- BIOCHEM J [31]
- NAT CHEM [31]
- PLANT COMMUN. [31]
- MOL PLANT [29]
- CELL REP MED [28]
- FEBS LETT [28]
- ACS NANO [27]
- BIOMOLECULES [27]
- NAT NEUROSCI [27]
- RNA [26]
- NATL SCI REV [25]
- SCI SIGNAL [25]
- BIOCHIM BIOPHYS ACTA BIOENERG [23]
- EMERG MICROBES INFECT [23]
- J.MOL.CELL.CARDIOL. [23]
- ACS CHEM BIOL [22]
- J EXP MED [22]
- ACTA PHARMACOL.SIN. [21]
- NAT CELL BIOL [21]
- OPEN BIOL [21]
- CELL CHEM BIOL [20]
- FRONT IMMUNOL [20]
- HLIFE [20]
- ACTA CRYSTALLOGR F STRUCT BIOL COMMUN [19]
- CURR BIOL [19]
- SCI BULL (BEIJING) [19]
- ACS CATAL [18]
- MICROBIOL SPECTR [18]
- MOL MICROBIOL [17]
- NAT IMMUNOL [17]
- ACS CENT SCI [16]
- COMMUN MATER [16]
- MOL PHARMACOL [16]
Software
- CRYOSPARC [12485]
- RELION [10008]
- CTFFIND [1532]
- GCTF [773]
- CISTEM [424]
- SPIDER [417]
- CHIMERA [390]
- PHENIX [340]
- COOT [319]
- FREALIGN [307]
- WARP [234]
- UCSF CHIMERAX [216]
- EMAN [187]
- EMAN2 [173]
- UCSF CHIMERA [154]
- IMOD [125]
- IMAGIC [116]
- SPHIRE [105]
- DYNAMO [96]
- CRYOLO [94]
- JSPR [89]
- AV3 [66]
- MATLAB [66]
- XMIPP [63]
- EMAN2, SPARX [61]
- TOM TOOLBOX [49]
- SPARX [48]
- AIMLESS [46]
- SITUS [46]
- IMAGIC, SPIDER [41]
- AUTO3DEM [38]
- SPIDER, FREALIGN [37]
- SIMPLE [34]
- MDFF [33]
- TOM [33]
- APPION, SPIDER [32]
- ISOLDE [29]
- MRC [29]
- URO [29]
- IHRSR [27]
- CTFPHASEFLIP [26]
- EMAN1 [26]
- PYTOM [26]
- NOVACTF [25]
- CHIMERA, SITUS [24]
- SPIDER, APPION [22]
- EMAN2, RELION [20]
- SUBTOM [20]
- CTFFIND4 [19]
- SPRING [19]
- CHIMERA, MDFF [18]
- EMAN1, EMAN2 [18]
- MOLREP [18]
- APPION, SPIDER, SPARX, EMAN2 [17]
- EMCLARITY [17]
- PEET [17]
- SPIDER, RELION [17]
- CHIMERA, COOT [16]
- CTFFIND3, RELION [16]
- MOTIONCORR2 [16]
- O [16]
- POINTLESS [16]
- UNBLUR, CTFFIND4, FREALIGN [16]
- COMET [15]
- CTFFIND3 [15]
- FREALIX [15]
- TOPAZ [15]
- CHIMERA, FLEX-EM [14]
- EMFIT [14]
- IMAGIC-5 [14]
- SCIPION [14]
- SPIDER, IMAGIC [14]
- BSOFT [13]
- DIREX [13]
- EMREADY [13]
- PHASER [13]
- PHOELIX, SUPRIM [13]
- REFMAC [13]
- AMIRA [12]
- IMAGIC-5, SPIDER [12]
- IMOD, TOMO3D [12]
- PHOELIX [12]
- SPARX/EMAN2 [12]
- EMAN, SPIDER [11]
- MPSA [11]
- SPIDER, EMAN [11]
- TOMO3D [11]
- XSCALE [11]
- APPION [10]
- EMAN, XMIPP [10]
- EMAN2, RELION, 1.3 [10]
- SPIDER, EMAN2 [10]
- SPIDER, IHRSR [10]
- EMAN1, FREALIGN [9]
- EMAN2/SPARX [9]
- FLEX-EM [9]
- FOCUS [9]
- GAP [9]
- MRC, IMAGIC, SPIDER [9]
- PROTOMO [9]
Microscope
- FEI TITAN KRIOS [21605]
- TFS KRIOS [10623]
- FEI TALOS ARCTICA [2117]
- TFS GLACIOS [1442]
- FEI TECNAI F20 [913]
- FEI POLARA 300 [823]
- JEOL CRYO ARM 300 [607]
- FEI TECNAI F30 [404]
- FEI TITAN [316]
- FEI TECNAI ARCTICA [302]
- FEI TECNAI SPIRIT [183]
- FEI TECNAI 12 [182]
- TFS TALOS [155]
- FEI TECNAI 20 [148]
- FEI/PHILIPS CM200FEG [135]
- JEOL 3200FSC [107]
- JEOL CRYO ARM 200 [72]
- JEOL 2010F [70]
- FEI/PHILIPS CM300FEG/T [45]
- FEI MORGAGNI [43]
- JEOL 2200FS [43]
- JEOL 2100F [40]
- JEOL 1230 [37]
- JEOL 2100 [29]
- JEOL 3200FS [27]
- TFS TITAN THEMIS [25]
- FEI/PHILIPS CM120T [22]
- JEOL 4000EX [22]
- TFS TALOS L120C [22]
- JEOL 3000SFF [21]
- JEOL KYOTO-3000SFF [21]
- JEOL 1200EXII [19]
- OTHER [19]
- FEI TECNAI 10 [15]
- FEI/PHILIPS CM200FEG/ST [15]
- TFS TALOS F200C [15]
- FEI/PHILIPS EM420 [14]
- FEI/PHILIPS CM300FEG/HE [13]
- JEOL 1200EX [13]
- JEOL 1400 [12]
- JEOL 1400/HR YPS FEG [11]
- FEI/PHILIPS CM200T [9]
- FEI/PHILIPS CM200FEG/UT [7]
- ZEISS LIBRA120PLUS [7]
- FEI/PHILIPS CM12 [6]
- JEOL 2000EX [6]
- JEOL 2200FSC [6]
- JEOL 100CX [5]
- JEOL 2010 [5]
- FEI TECNAI SPHERA [4]
- FEI/PHILIPS CM10 [3]
- FEI/PHILIPS CM300FEG/ST [3]
- HITACHI H-9500SD [3]
- JEOL 1010 [3]
- JEOL 3100FFC [3]
- SHUIMU TOTEM 300S [3]
- TFS TUNDRA [3]
- JEOL 2010HC [2]
- JEOL 2010HT [2]
- JEOL 2010UHR [2]
- HITACHI EF2000 [1]
- HITACHI H7600 [1]
- JEOL 1200 [1]
- JEOL 2000EXII [1]
- JEOL 2011 [1]
- ZEISS LEO912 [1]
Electron Source
- FIELD EMISSION GUN [39846]
- LAB6 [509]
- OTHER [292]
- TUNGSTEN HAIRPIN [155]
Film or detector model
- GATAN K3 6K X 4K [11771]
- GATAN K3 BIOQUANTUM 6K X 4K [8093]
- GATAN K2 SUMMIT 4K X 4K [7481]
- FEI FALCON IV 4K X 4K [4398]
- FEI FALCON III 4K X 4K [2165]
- GATAN K2 QUANTUM 4K X 4K [1375]
- TFS FALCON 4I 4K X 4K [1045]
- FEI FALCON II 4K X 4K [916]
- KODAK SO-163 FILM [626]
- GATAN K3 BIOCONTINUUM 6K X 4K [563]
- GATAN ULTRASCAN 4000 4K X 4K [486]
- TVIPS TEMCAM-F416 4K X 4K [386]
- GATAN K2 4K X 4K [179]
- GATAN K2 BASE 4K X 4K [164]
- OTHER [128]
- FEI EAGLE 4K X 4K [110]
- TVIPS TEMCAM-F415 4K X 4K [105]
- GENERIC GATAN 4K X 4K [89]
- FEI CETA 4K X 4K [86]
- FEI FALCON I 4K X 4K [66]
- GENERIC CCD [65]
- DIRECT ELECTRON DE-20 5K X 3K [57]
- TVIPS TEMCAM-F816 8K X 8K [43]
- GENERIC GATAN [33]
- GENERIC TVIPS 4K X 4K [32]
- DIRECT ELECTRON DE-64 8K X 8K [30]
- DIRECT ELECTRON APOLLO 4K X 4K [29]
- GATAN MULTISCAN [26]
- GATAN K2 IS 4K X 4K [25]
- DIRECT ELECTRON DE-16 4K X 4K [24]
- FEI EAGLE 2K X 2K [23]
- GATAN ULTRASCAN 1000 2K X 2K [23]
- DIRECT ELECTRON DE-10 5K X 4K [21]
- DIRECT ELECTRON DE-12 4K X 3K [15]
- TVIPS TEMCAM-F224 2K X 2K [15]
- DECTRIS SINGLA 1K X 1K [12]
- KODAK 4489 FILM [10]
- AGFA SCIENTA FILM [9]
- GENERIC FILM [8]
- GENERIC GATAN 2K X 2K [8]
- GATAN ORIUS SC200 2K X 2K [5]
- GENERIC TVIPS [5]
- GATAN ULTRASCAN 10000 10K X 10K [3]
- GENERIC IMAGE PLATES [3]
- GENERIC TVIPS 2K X 2K [3]
- GATAN ORIUS SC600 2.7K X 2.7K [2]
- SIA 15C 3K X 3K [2]
- DECTRIS ARINA 0.2K X 0.2K [1]
- PROSCAN TEM-PIV 2K X 2K [1]
External links
- PDB [38428]
- UniProt [34507]
- PDBe-Kb [31857]
- AlphaFold DB [30930]
- InterPro [26434]
- Gene Ontology [25738]
- Pfam [23681]
- ChEBI [19239]
- ChEMBL [17489]
- DrugBank [15427]
- Complex Portal [9624]
- EMPIAR [3660]
- SCOP2 [585]
- CATH [409]