Filter By
Current Database
- EMDB [50244]
Current status
- REL [50244]
Sample type
- Complex [42443]
- Protein [34539]
- Ligand [19862]
- RNA [4637]
- Virus [3360]
- DNA [3305]
- Cellular component [2811]
- Sample [1661]
- Cell [926]
- Tissue [250]
- Other [233]
- Em label [1]
Organism
- Homo sapiens [18555]
- Synthetic construct [3652]
- Mus musculus [3251]
- Escherichia coli [2832]
- Severe acute respiratory syndrome coronavirus [2466]
- Saccharomyces cerevisiae [2201]
- Rattus norvegicus [1097]
- Escherichia coli [1079]
- Bos taurus [1003]
- Human immunodeficiency virus 1 [973]
- Oryctolagus cuniculus [872]
- Sus scrofa [852]
- Saccharomyces cerevisiae [773]
- Xenopus laevis [596]
- Lama glama [576]
- Arabidopsis thaliana [510]
- Macaca mulatta [405]
- Chlamydomonas reinhardtii [364]
- Mycolicibacterium smegmatis [316]
- Drosophila melanogaster [296]
- Influenza a virus [279]
- Mycobacterium tuberculosis [247]
- Bacillus subtilis [245]
- Gallus gallus [217]
- Tetrahymena thermophila [183]
- Escherichia coli [178]
- Vicugna pacos [174]
- Pseudomonas aeruginosa [171]
- Enterobacteria phage m13 [166]
- Staphylococcus aureus [165]
- Caenorhabditis elegans [163]
- Thermus thermophilus [162]
- Chaetomium thermophilum [162]
- Danio rerio [152]
- Mycobacterium tuberculosis [138]
- Saccharomyces cerevisiae [136]
- Leishmania tarentolae [136]
- Bacillus subtilis [123]
- Ovis aries [123]
- Enterobacteria phage t4 [119]
- Chaetomium thermophilum [119]
- Salmonella enterica [114]
- Bacillus sp. (strain ps3) [113]
- Synechocystis sp. pcc 6803 [112]
- Plasmodium falciparum [104]
- Escherichia virus t7 [102]
- Mycolicibacterium smegmatis [101]
- Schizosaccharomyces pombe [98]
- Severe acute respiratory syndrome coronavirus [95]
- Streptococcus pyogenes [93]
- Trypanosoma brucei [91]
- Pseudomonas aeruginosa [89]
- Vibrio cholerae [89]
- Plasmodium falciparum [88]
- Aequorea victoria [88]
- African swine fever virus [86]
- Mycoplasma pneumoniae [85]
- Spinacia oleracea [79]
- Monkeypox virus [71]
- Cricetulus griseus [69]
- Human herpesvirus 1 [69]
- Hepatitis b virus [68]
- Middle east respiratory syndrome-related coronavirus [68]
- Human cytomegalovirus [67]
- Clostridioides difficile [67]
- Macaca fascicularis [67]
- Schizosaccharomyces pombe [65]
- (no species) [64]
- Chikungunya virus [64]
- Pseudomonas phage phi6 [62]
- Salmonella enterica [62]
- Eastern equine encephalitis virus [61]
- Saccharomyces cerevisiae [61]
- Thermus thermophilus [60]
- Human immunodeficiency virus [59]
- Enterobacteria phage t4 [59]
- Polytomella sp. pringsheim 198.80 [59]
- Klebsiella pneumoniae [58]
- Escherichia coli [57]
- Lassa mammarenavirus [55]
- Adeno-associated virus [55]
- Dna molecule [55]
- Enterovirus d [55]
- Neurospora crassa [55]
- Trypanosoma brucei [55]
- Amanita phalloides [55]
- Thermoplasma acidophilum [53]
- Escherichia phage lambda [53]
- Clostridium botulinum [52]
- Legionella pneumophila [52]
- Epstein-barr virus (strain gd1) [51]
- Equus caballus [51]
- Severe acute respiratory syndrome coronavirus [50]
- Zaire ebolavirus [49]
- Sus scrofa [49]
- Human coronavirus hku1 [48]
- Canis lupus [48]
- Porphyridium purpureum [47]
- Human immunodeficiency virus 1 [47]
- Zika virus [47]
EM Method
- Single-particle [44497]
- Subtomogram averaging [2583]
- Helical reconstruction [2210]
- Tomography [954]
Resolution
- < 2Å [344]
- ≥ 2Å and < 3Å [10907]
- ≥ 3Å and < 4Å [22035]
- ≥ 4Å and < 5Å [5212]
- ≥ 5Å and < 6Å [1228]
- ≥ 6Å and < 8Å [2489]
- ≥ 8Å and < 12Å [2065]
- ≥ 12Å and < 16Å [1096]
- ≥ 16Å and < 20Å [873]
- ≥ 20Å and < 30Å [2414]
- ≥ 30Å [1577]
Model molecular weight
- 0-50 kDa [21]
- 50-100 kDa [86]
- 100-250 kDa [367]
- 250-500 kDa [305]
- 500-1000 kDa [173]
- 1-2 MDa [84]
- 2-5 MDa [78]
- 5-10 MDa [14]
- > 10 MDa [13]
Release Date
- 2026 [1907]
- 2025 [11366]
- 2024 [8894]
- 2023 [7275]
- 2022 [5805]
- 2021 [4239]
- 2020 [3611]
- 2019 [2271]
- 2018 [1690]
- 2017 [958]
- 2016 [572]
- 2015 [6]
- 2014 [36]
- 2013 [395]
- 2012 [338]
- 2011 [213]
- 2010 [165]
- 2009 [151]
- 2008 [46]
- 2007 [102]
- 2006 [108]
- 2005 [38]
- 2004 [26]
- 2003 [31]
- 2002 [1]
Author by name
- Zhang Y [1687]
- Liu J [1608]
- Ward AB [1591]
- Wang Y [1588]
- Zhang X [1463]
- Wang X [1351]
- Liu Y [1140]
- Li Y [1135]
- Wang J [1073]
- Zhang Z [1033]
- Li X [979]
- Li S [969]
- Ren G [956]
- Li Z [950]
- Zhang L [883]
- Li J [869]
- Zhang J [863]
- Zhang M [850]
- Chen Y [806]
- Wang L [793]
- Gao Y [773]
- Wang S [771]
- Wang H [755]
- Liu S [685]
- Li H [673]
- Zhang S [665]
- Chen Z [646]
- Chen X [628]
- Wang C [624]
- Liu H [606]
- Liu C [591]
- Shi Y [590]
- Liu Z [579]
- Zhu Y [574]
- Zhou ZH [565]
- Liu L [564]
- Wang Q [563]
- Wu H [563]
- Xu Y [561]
- Yang Y [560]
- Zhang H [557]
- Zhang K [557]
- Li D [550]
- Liu X [534]
- Jiang Y [533]
- Chen J [529]
- Wang Z [521]
- Beckmann R [514]
- Zhao Y [513]
- Cottrell CA [505]
- Han J [493]
- Huang Y [473]
- Cheng J [470]
- Yang X [455]
- Zhou L [452]
- Burton DR [449]
- Xu J [435]
- Ozorowski G [433]
- Yu X [430]
- Hu Z [429]
- Xu C [422]
- Zhang C [416]
- Li W [410]
- Sewall LM [402]
- Wilson IA [399]
- Zhang P [396]
- Zhang R [396]
- Torres JL [395]
- Wang P [395]
- Chen L [393]
- Zhang W [391]
- Sun Y [388]
- Wu J [387]
- Zhao J [386]
- Sanders RW [380]
- Zhu X [380]
- Zhou Y [374]
- Wu C [370]
- Yang F [368]
- Wang M [366]
- Lu Y [363]
- Berninghausen O [362]
- Chiu W [360]
- Kotecha A [360]
- Zhao X [359]
- Zhou J [359]
- Wang W [355]
- Wu Y [355]
- Zhang B [355]
- Rao Z [354]
- Yu J [354]
- Zhang Q [354]
- Wang F [353]
- Yuan Q [353]
- Li L [352]
- Cramer P [350]
- Yu Z [350]
- Li M [349]
- Zhou Q [348]
- Brown A [342]
Author by ORCID
- Skiniotis G [12]
- Ward AB [10]
- Li H [10]
- Gao GF [10]
- Xu HE [10]
- Gao N [10]
- Kotecha A [9]
- Chiu W [9]
- Rubinstein JL [9]
- Kobilka BK [8]
- Zhang K [8]
- Chai P [8]
- Kwong PD [8]
- He X [7]
- Scheres SHW [7]
- Liu B [7]
- Qi J [7]
- Plevka P [7]
- Blaza JN [6]
- Kurumizaka H [6]
- Robinson CV [6]
- Sexton PM [6]
- Raunser S [6]
- Cheng Y [6]
- Kuhlbrandt W [6]
- Cottrell CA [6]
- Gmeiner P [6]
- Goedert M [6]
- Shirouzu M [6]
- Xu F [6]
- Zhang P [6]
- Papasergi-scott MM [6]
- Sun JP [6]
- Wilson DN [6]
- Beckmann R [6]
- Wootten D [6]
- Hilger D [5]
- Czarnocki-cieciura M [5]
- Baker D [5]
- Xu Y [5]
- Mclaughlin SH [5]
- Wang Y [5]
- Skowronek K [5]
- Kollman JM [5]
- Batebi H [5]
- Crispin M [5]
- Stahlberg H [5]
- Fuzik T [5]
- Schoehn G [5]
- Li M [5]
- Belousoff MJ [5]
- Ranson NA [5]
- Ramakrishnan V [5]
- Panova O [5]
- Amunts A [5]
- Yamashita K [5]
- Veesler D [5]
- He F [5]
- Gao Y [5]
- Li D [5]
- Perez-hernandez G [5]
- Hildebrand PW [5]
- Subramaniam S [5]
- Sui SF [4]
- Zhang L [4]
- Frank J [4]
- Schneider C [4]
- Yu EW [4]
- Gu J [4]
- Ke A [4]
- Zheng W [4]
- Danev R [4]
- Brohawn SG [4]
- Ekemezie CL [4]
- Guo H [4]
- Hill CH [4]
- Southworth DR [4]
- Becker T [4]
- Li N [4]
- Noble AJ [4]
- Einsle O [4]
- Sun L [4]
- Deganutti G [4]
- Barford D [4]
- Tian C [4]
- Greber BJ [4]
- Zhang X [4]
- Li X [4]
- Chang YC [4]
- Gao Y [4]
- Rybak MY [4]
- Roth BL [4]
- Brown CR [4]
- Sachse C [4]
- Campbell EA [4]
- Li F [4]
- Tse E [4]
- King NP [4]
- Lu W [4]
- Radford SE [4]
Journal
- NAT COMMUN [9221]
- TO BE PUBLISHED [5314]
- NATURE [4417]
- NAT STRUCT MOL BIOL [2872]
- PNAS [2691]
- SCIENCE [2476]
- BIORXIV [2193]
- CELL [2085]
- SCI ADV [1657]
- MOL CELL [1639]
- ELIFE [1403]
- STRUCTURE [1229]
- CELL REP [1181]
- NUCLEIC ACIDS RES [995]
- EMBO J [658]
- CELL RES [649]
- COMMUN BIOL [638]
- J MOL BIOL [602]
- J VIROL [562]
- J BIOL CHEM [473]
- CELL DISCOV [439]
- NAT CHEM BIOL [435]
- PLOS PATHOG [434]
- NAT MICROBIOL [385]
- ACTA CRYSTALLOGR D STRUCT BIOL [339]
- SCI REP [281]
- NAT METHODS [258]
- J STRUCT BIOL [246]
- MBIO [246]
- NAT PLANTS [223]
- IMMUNITY [203]
- EMBO REP [194]
- PLOS BIOL [182]
- CELL HOST MICROBE [174]
- J AM CHEM SOC [167]
- PROTEIN SCI [157]
- PROTEIN CELL [148]
- J CELL BIOL [145]
- SCI TRANSL MED [129]
- VIRUSES [125]
- NEURON [121]
- NPJ VACCINES [119]
- IUCRJ [98]
- PLOS ONE [96]
- ISCIENCE [95]
- INT J MOL SCI [90]
- LIFE SCI ALLIANCE [90]
- PNAS NEXUS [82]
- J MED CHEM [76]
- J STRUCT BIOL X [74]
- BIOCHEMISTRY [72]
- SCI IMMUNOL [71]
- COMMUN CHEM [70]
- ACS NANO [68]
- CURR BIOL [67]
- SIGNAL TRANSDUCT TARGET THER [62]
- RES SQ [61]
- ADV SCI [59]
- J CLIN INV [54]
- DEV CELL [53]
- ACTA NEUROPATHOL [51]
- BLOOD [51]
- MOL BIOL CELL [51]
- ANGEW CHEM INT ED ENGL [49]
- FEBS J [49]
- INT J BIOL MACROMOL [49]
- RNA [49]
- BIOMOLECULES [48]
- NAT NANOTECHNOL [45]
- FRONT MOL BIOSCI [42]
- MOL PLANT [41]
- NAT CATAL [41]
- BIOCHEM BIOPHYS RES COMMUN [40]
- VIROLOGY [39]
- EBIOMEDICINE [38]
- CELL REP METHODS [36]
- EMERG MICROBES INFECT [35]
- PLANT COMMUN. [33]
- GENES DEV [32]
- BIOCHIM BIOPHYS ACTA MOL CELL BIOL LIPIDS [31]
- FEBS LETT [31]
- NAT CHEM [31]
- NAT IMMUNOL [30]
- FRONT IMMUNOL [29]
- J EXP MED [27]
- NATL SCI REV [27]
- PLANT CELL [27]
- BIOCHEM J [26]
- ACS CHEM BIOL [25]
- CELL REP MED [25]
- J BACTERIOL [25]
- NAT CELL BIOL [25]
- ACTA PHARMACOL.SIN. [24]
- J GEN VIROL [24]
- ACTA CRYSTALLOGR F STRUCT BIOL COMMUN [23]
- BIOCHIM BIOPHYS ACTA BIOENERG [23]
- J.MOL.CELL.CARDIOL. [23]
- NAT MATER [23]
- CELL DEATH DIFFER. [22]
- HLIFE [22]
Software
- RELION [13312]
- CRYOSPARC [12881]
- CTFFIND [2262]
- GCTF [1503]
- TOMOCTF [524]
- IMOD [470]
- WARP [468]
- CISTEM [451]
- IPET [440]
- SPIDER [407]
- FREALIGN [394]
- EMAN [307]
- DYNAMO [297]
- EMAN2 [295]
- COOT [270]
- CHIMERA [193]
- PEET [186]
- PHENIX [159]
- JSPR [138]
- CRYOLO [134]
- PYTOM [131]
- SPHIRE [114]
- MATLAB [109]
- XMIPP [108]
- UCSF CHIMERA [106]
- UCSF CHIMERAX [100]
- IMAGIC [99]
- AUTO3DEM [94]
- AV3 [83]
- EMCLARITY [72]
- NOVACTF [71]
- TOM TOOLBOX [61]
- CTFFIND3 [60]
- NOVASTA [54]
- STOPGAP [54]
- CTFPHASEFLIP [49]
- SPARX [49]
- SITUS [41]
- TOM [41]
- URO [37]
- SIMPLE [35]
- BSOFT [32]
- EMFIT [31]
- MDFF [31]
- APPION [30]
- SCIPION [29]
- EM3DR2 [28]
- ISOLDE [25]
- MPSA [25]
- CTFFIND4 [24]
- J3DR [22]
- SPIDER, APPION [22]
- M [21]
- O [21]
- SUBTOM [21]
- CTFTILT [20]
- IHRSR [20]
- IMAGIC, SPIDER [20]
- IMOD, BSOFT, SPIDER, TOM, PACKAGE, MATLAB [20]
- JALIGN [20]
- EMAN1 [19]
- FREALIX [19]
- SPIDER, FREALIGN [17]
- CRYODRGN [16]
- I3 [16]
- IMAGIC, CUSTOM, SPIDER [16]
- MULTI-PATH SA [16]
- SPIDER, IMAGIC [16]
- APPION, SPIDER, EMAN [15]
- EMAN2, SPARX [15]
- ETOMO [15]
- IMIRS [15]
- EMAN1, EMAN2 [13]
- PHOELIX, SUPRIM [13]
- SPRING [13]
- EMAN, SPIDER [12]
- SPARX/EMAN2 [12]
- AMIRA [11]
- GAP [11]
- IMAGIC-5, SPIDER [11]
- SPIDER PACKAGE [11]
- CHIMERA, SITUS [10]
- EMAN, XMIPP [10]
- FOCUS [10]
- IMOD, BSOFT [10]
- MOTIONCORR2 [10]
- SPIDER, EMAN [10]
- TOPAZ [10]
- AMIRAFPM [9]
- EMREADY [9]
- IMOD, RAPTOR, PROTOMO [9]
- EMAN, FREALIGN [8]
- EMIRA [8]
- EMPFT EM3DR [8]
- IMAGIC, FREALIGN [8]
- MOLREP, CHIMERA [8]
- MRC [8]
- SPIDER, PACKAGE [8]
- CTFIND3 [7]
- DIREX [7]
Microscope
- FEI TITAN KRIOS [28697]
- TFS KRIOS [10128]
- FEI TALOS ARCTICA [2634]
- TFS GLACIOS [1577]
- FEI TECNAI F20 [1092]
- FEI POLARA 300 [837]
- FEI TECNAI SPIRIT [660]
- JEOL CRYO ARM 300 [605]
- FEI TECNAI F30 [595]
- FEI TITAN [555]
- ZEISS LIBRA120PLUS [454]
- FEI TECNAI ARCTICA [392]
- FEI TECNAI 20 [232]
- TFS TALOS [197]
- FEI TECNAI 12 [183]
- FEI/PHILIPS CM200FEG [175]
- JEOL 3200FSC [138]
- JEOL 2200FS [128]
- JEOL CRYO ARM 200 [87]
- FEI/PHILIPS CM300FEG/T [84]
- JEOL 2100F [77]
- TFS TALOS L120C [75]
- JEOL 2010F [70]
- TFS TALOS F200C [65]
- FEI/PHILIPS EM420 [45]
- JEOL 2100 [41]
- TFS TITAN THEMIS [39]
- JEOL 3200FS [35]
- JEOL 1230 [29]
- FEI/PHILIPS CM120T [27]
- JEOL 3100FFC [26]
- FEI MORGAGNI [25]
- JEOL 3000SFF [21]
- JEOL 1200EXII [19]
- TFS TUNDRA [19]
- FEI/PHILIPS CM200T [18]
- JEOL 4000 [17]
- FEI TECNAI 10 [15]
- FEI/PHILIPS CM200FEG/ST [14]
- JEOL 4000EX [14]
- FEI/PHILIPS CM300FEG/HE [13]
- JEOL 1400 [13]
- JEOL 1200EX [12]
- JEOL 1400/HR YPS FEG [11]
- FEI/PHILIPS CM12 [8]
- JEOL 100CX [7]
- JEOL 2000EX [6]
- FEI/PHILIPS CM200FEG/UT [5]
- FEI/PHILIPS CM300FEG/ST [5]
- JEOL 2010 [5]
- JEOL 2200FSC [5]
- JEOL 3100FEF [5]
- FEI TECNAI SPHERA [4]
- FEI/PHILIPS CM10 [4]
- JEOL KYOTO-3000SFF [4]
- OTHER [4]
- HITACHI EF2000 [3]
- JEOL 1000EES [3]
- JEOL 1010 [3]
- JEOL 1200 [3]
- JEOL 2010HT [2]
- JEOL 2010UHR [2]
- FEI/PHILIPS CM200FEG/SOPHIE [1]
- HITACHI H-9500SD [1]
- HITACHI H7600 [1]
- JEOL 2000EXII [1]
- JEOL 2010HC [1]
- JEOL 2011 [1]
- SHUIMU TOTEM 300S [1]
- ZEISS LEO912 [1]
Electron Source
- FIELD EMISSION GUN [48301]
- LAB6 [1557]
- OTHER [248]
- TUNGSTEN HAIRPIN [139]
Film or detector model
- GATAN K3 6K X 4K [13381]
- GATAN K3 BIOQUANTUM 6K X 4K [10442]
- GATAN K2 SUMMIT 4K X 4K [9999]
- FEI FALCON IV 4K X 4K [4648]
- FEI FALCON III 4K X 4K [2948]
- GATAN K2 QUANTUM 4K X 4K [1785]
- FEI FALCON II 4K X 4K [1168]
- TFS FALCON 4I 4K X 4K [967]
- GATAN ULTRASCAN 4000 4K X 4K [880]
- KODAK SO-163 FILM [781]
- TVIPS TEMCAM-F416 4K X 4K [519]
- GATAN K3 BIOCONTINUUM 6K X 4K [458]
- FEI EAGLE 4K X 4K [420]
- OTHER [323]
- FEI CETA 4K X 4K [281]
- GATAN K2 BASE 4K X 4K [199]
- DIRECT ELECTRON DE-20 5K X 3K [120]
- GENERIC GATAN 4K X 4K [90]
- GATAN ULTRASCAN 1000 2K X 2K [86]
- GENERIC CCD [69]
- TVIPS TEMCAM-F415 4K X 4K [60]
- GENERIC TVIPS 4K X 4K [57]
- FEI EAGLE 2K X 2K [52]
- DIRECT ELECTRON DE-64 8K X 8K [48]
- FEI FALCON I 4K X 4K [42]
- GATAN K2 IS 4K X 4K [40]
- GENERIC GATAN [35]
- DIRECT ELECTRON DE-16 4K X 4K [32]
- DIRECT ELECTRON APOLLO 4K X 4K [30]
- TVIPS TEMCAM-F816 8K X 8K [30]
- GATAN MULTISCAN [22]
- DIRECT ELECTRON DE-10 5K X 4K [20]
- DIRECT ELECTRON DE-12 4K X 3K [20]
- TVIPS TEMCAM-F216 2K X 2K [17]
- TVIPS TEMCAM-F224 2K X 2K [14]
- DECTRIS SINGLA 1K X 1K [12]
- GENERIC FILM [11]
- KODAK 4489 FILM [11]
- AGFA SCIENTA FILM [9]
- GENERIC TVIPS [9]
- GATAN K2 4K X 4K [7]
- GENERIC GATAN 2K X 2K [7]
- DECTRIS ELA 1K X 0.5K [6]
- GATAN ALPINE 2.3K X 3.2K [5]
- GATAN ORIUS SC200 2K X 2K [5]
- SIA 15C 3K X 3K [4]
- GENERIC TVIPS 2K X 2K [3]
- GATAN ORIUS SC1000 4K X 2.7K [2]
- GATAN ORIUS SC600 2.7K X 2.7K [2]
- GATAN ULTRASCAN 10000 10K X 10K [2]
- GENERIC IMAGE PLATES [2]
- DECTRIS ARINA 0.2K X 0.2K [1]
- GENERIC CCD 2K X 2K [1]
- PROSCAN TEM-PIV 2K X 2K [1]
External links
- PDB [1147]
- UniProt [1089]
- PDBe-Kb [993]
- AlphaFold DB [932]
- InterPro [915]
- Gene Ontology [850]
- Pfam [832]
- ChEBI [648]
- ChEMBL [595]
- DrugBank [533]
- Complex Portal [305]
- EMPIAR [107]
- SCOP2 [27]
- CATH [12]
Resolution: 2.84 Å
EM Method: Single-particle
Fitted PDBs: 8v9t
Q-score: 0.385
Shatarupa A, Brown D, Olinares PDB, Chase J, Isiorho E, Chait BT, Jeruzalmi D
Nucleic Acids Res (2025) 53 [ Pubmed: 41312769 DOI: doi:10.1093/nar/gkaf1139 ]
Resolution: 4.3 Å
EM Method: Single-particle
Fitted PDBs: 9clm
Q-score: 0.265
Dubey S, Noinaj N
To Be Published
Resolution: 3.71 Å
EM Method: Single-particle
Fitted PDBs: 9cmg
Q-score: 0.413
Dubey S, Noinaj N
To Be Published
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 9dc4
Q-score: 0.519
Dubey S, Noinaj N
To Be Published
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 9dhx
Q-score: 0.555
Sarkar S, Gebert LFR, MacRae IJ
To Be Published
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 9mi8
Q-score: 0.314
Sverzhinsky A, Xue H, Langelier MF, Muniz Correa MV, Del Mundo J, Classen S, Hammel M, Rothenberg E, Pascal JM
Nat Commun (2026) [ Pubmed: 41698892 DOI: doi:10.1038/s41467-026-69375-3 ]
Resolution: 3.51 Å
EM Method: Single-particle
Fitted PDBs: 9na1
Q-score: 0.354
Jones CP, Ferre-D'Amare AR
To Be Published
Resolution: 3.56 Å
EM Method: Single-particle
Fitted PDBs: 9na7
Q-score: 0.338
Jones CP, Ferre-D'Amare AR
To Be Published
Resolution: 3.67 Å
EM Method: Single-particle
Fitted PDBs: 9nak
Q-score: 0.324
Jones CP, Ferre-D'Amare AR
To Be Published
Resolution: 2.87 Å
EM Method: Single-particle
Fitted PDBs: 9nam
Q-score: 0.411
Jones CP, Ferre-D'Amare AR
To Be Published
Filter By
Current Database
- EMDB [50244]
Current status
- REL [50244]
Sample type
- Complex [42443]
- Protein [34539]
- Ligand [19862]
- RNA [4637]
- Virus [3360]
- DNA [3305]
- Cellular component [2811]
- Sample [1661]
- Cell [926]
- Tissue [250]
- Other [233]
- Em label [1]
Organism
- Homo sapiens [18555]
- Synthetic construct [3652]
- Mus musculus [3251]
- Escherichia coli [2832]
- Severe acute respiratory syndrome coronavirus [2466]
- Saccharomyces cerevisiae [2201]
- Rattus norvegicus [1097]
- Escherichia coli [1079]
- Bos taurus [1003]
- Human immunodeficiency virus 1 [973]
- Oryctolagus cuniculus [872]
- Sus scrofa [852]
- Saccharomyces cerevisiae [773]
- Xenopus laevis [596]
- Lama glama [576]
- Arabidopsis thaliana [510]
- Macaca mulatta [405]
- Chlamydomonas reinhardtii [364]
- Mycolicibacterium smegmatis [316]
- Drosophila melanogaster [296]
- Influenza a virus [279]
- Mycobacterium tuberculosis [247]
- Bacillus subtilis [245]
- Gallus gallus [217]
- Tetrahymena thermophila [183]
- Escherichia coli [178]
- Vicugna pacos [174]
- Pseudomonas aeruginosa [171]
- Enterobacteria phage m13 [166]
- Staphylococcus aureus [165]
- Caenorhabditis elegans [163]
- Thermus thermophilus [162]
- Chaetomium thermophilum [162]
- Danio rerio [152]
- Mycobacterium tuberculosis [138]
- Saccharomyces cerevisiae [136]
- Leishmania tarentolae [136]
- Bacillus subtilis [123]
- Ovis aries [123]
- Enterobacteria phage t4 [119]
- Chaetomium thermophilum [119]
- Salmonella enterica [114]
- Bacillus sp. (strain ps3) [113]
- Synechocystis sp. pcc 6803 [112]
- Plasmodium falciparum [104]
- Escherichia virus t7 [102]
- Mycolicibacterium smegmatis [101]
- Schizosaccharomyces pombe [98]
- Severe acute respiratory syndrome coronavirus [95]
- Streptococcus pyogenes [93]
- Trypanosoma brucei [91]
- Pseudomonas aeruginosa [89]
- Vibrio cholerae [89]
- Plasmodium falciparum [88]
- Aequorea victoria [88]
- African swine fever virus [86]
- Mycoplasma pneumoniae [85]
- Spinacia oleracea [79]
- Monkeypox virus [71]
- Cricetulus griseus [69]
- Human herpesvirus 1 [69]
- Hepatitis b virus [68]
- Middle east respiratory syndrome-related coronavirus [68]
- Human cytomegalovirus [67]
- Clostridioides difficile [67]
- Macaca fascicularis [67]
- Schizosaccharomyces pombe [65]
- (no species) [64]
- Chikungunya virus [64]
- Pseudomonas phage phi6 [62]
- Salmonella enterica [62]
- Eastern equine encephalitis virus [61]
- Saccharomyces cerevisiae [61]
- Thermus thermophilus [60]
- Human immunodeficiency virus [59]
- Enterobacteria phage t4 [59]
- Polytomella sp. pringsheim 198.80 [59]
- Klebsiella pneumoniae [58]
- Escherichia coli [57]
- Lassa mammarenavirus [55]
- Adeno-associated virus [55]
- Dna molecule [55]
- Enterovirus d [55]
- Neurospora crassa [55]
- Trypanosoma brucei [55]
- Amanita phalloides [55]
- Thermoplasma acidophilum [53]
- Escherichia phage lambda [53]
- Clostridium botulinum [52]
- Legionella pneumophila [52]
- Epstein-barr virus (strain gd1) [51]
- Equus caballus [51]
- Severe acute respiratory syndrome coronavirus [50]
- Zaire ebolavirus [49]
- Sus scrofa [49]
- Human coronavirus hku1 [48]
- Canis lupus [48]
- Porphyridium purpureum [47]
- Human immunodeficiency virus 1 [47]
- Zika virus [47]
EM Method
- Single-particle [44497]
- Subtomogram averaging [2583]
- Helical reconstruction [2210]
- Tomography [954]
Resolution
- < 2Å [344]
- ≥ 2Å and < 3Å [10907]
- ≥ 3Å and < 4Å [22035]
- ≥ 4Å and < 5Å [5212]
- ≥ 5Å and < 6Å [1228]
- ≥ 6Å and < 8Å [2489]
- ≥ 8Å and < 12Å [2065]
- ≥ 12Å and < 16Å [1096]
- ≥ 16Å and < 20Å [873]
- ≥ 20Å and < 30Å [2414]
- ≥ 30Å [1577]
Model molecular weight
- 0-50 kDa [21]
- 50-100 kDa [86]
- 100-250 kDa [367]
- 250-500 kDa [305]
- 500-1000 kDa [173]
- 1-2 MDa [84]
- 2-5 MDa [78]
- 5-10 MDa [14]
- > 10 MDa [13]
Release Date
- 2026 [1907]
- 2025 [11366]
- 2024 [8894]
- 2023 [7275]
- 2022 [5805]
- 2021 [4239]
- 2020 [3611]
- 2019 [2271]
- 2018 [1690]
- 2017 [958]
- 2016 [572]
- 2015 [6]
- 2014 [36]
- 2013 [395]
- 2012 [338]
- 2011 [213]
- 2010 [165]
- 2009 [151]
- 2008 [46]
- 2007 [102]
- 2006 [108]
- 2005 [38]
- 2004 [26]
- 2003 [31]
- 2002 [1]
Author by name
- Zhang Y [1687]
- Liu J [1608]
- Ward AB [1591]
- Wang Y [1588]
- Zhang X [1463]
- Wang X [1351]
- Liu Y [1140]
- Li Y [1135]
- Wang J [1073]
- Zhang Z [1033]
- Li X [979]
- Li S [969]
- Ren G [956]
- Li Z [950]
- Zhang L [883]
- Li J [869]
- Zhang J [863]
- Zhang M [850]
- Chen Y [806]
- Wang L [793]
- Gao Y [773]
- Wang S [771]
- Wang H [755]
- Liu S [685]
- Li H [673]
- Zhang S [665]
- Chen Z [646]
- Chen X [628]
- Wang C [624]
- Liu H [606]
- Liu C [591]
- Shi Y [590]
- Liu Z [579]
- Zhu Y [574]
- Zhou ZH [565]
- Liu L [564]
- Wang Q [563]
- Wu H [563]
- Xu Y [561]
- Yang Y [560]
- Zhang H [557]
- Zhang K [557]
- Li D [550]
- Liu X [534]
- Jiang Y [533]
- Chen J [529]
- Wang Z [521]
- Beckmann R [514]
- Zhao Y [513]
- Cottrell CA [505]
- Han J [493]
- Huang Y [473]
- Cheng J [470]
- Yang X [455]
- Zhou L [452]
- Burton DR [449]
- Xu J [435]
- Ozorowski G [433]
- Yu X [430]
- Hu Z [429]
- Xu C [422]
- Zhang C [416]
- Li W [410]
- Sewall LM [402]
- Wilson IA [399]
- Zhang P [396]
- Zhang R [396]
- Torres JL [395]
- Wang P [395]
- Chen L [393]
- Zhang W [391]
- Sun Y [388]
- Wu J [387]
- Zhao J [386]
- Sanders RW [380]
- Zhu X [380]
- Zhou Y [374]
- Wu C [370]
- Yang F [368]
- Wang M [366]
- Lu Y [363]
- Berninghausen O [362]
- Chiu W [360]
- Kotecha A [360]
- Zhao X [359]
- Zhou J [359]
- Wang W [355]
- Wu Y [355]
- Zhang B [355]
- Rao Z [354]
- Yu J [354]
- Zhang Q [354]
- Wang F [353]
- Yuan Q [353]
- Li L [352]
- Cramer P [350]
- Yu Z [350]
- Li M [349]
- Zhou Q [348]
- Brown A [342]
Author by ORCID
- Skiniotis G [12]
- Ward AB [10]
- Li H [10]
- Gao GF [10]
- Xu HE [10]
- Gao N [10]
- Kotecha A [9]
- Chiu W [9]
- Rubinstein JL [9]
- Kobilka BK [8]
- Zhang K [8]
- Chai P [8]
- Kwong PD [8]
- He X [7]
- Scheres SHW [7]
- Liu B [7]
- Qi J [7]
- Plevka P [7]
- Blaza JN [6]
- Kurumizaka H [6]
- Robinson CV [6]
- Sexton PM [6]
- Raunser S [6]
- Cheng Y [6]
- Kuhlbrandt W [6]
- Cottrell CA [6]
- Gmeiner P [6]
- Goedert M [6]
- Shirouzu M [6]
- Xu F [6]
- Zhang P [6]
- Papasergi-scott MM [6]
- Sun JP [6]
- Wilson DN [6]
- Beckmann R [6]
- Wootten D [6]
- Hilger D [5]
- Czarnocki-cieciura M [5]
- Baker D [5]
- Xu Y [5]
- Mclaughlin SH [5]
- Wang Y [5]
- Skowronek K [5]
- Kollman JM [5]
- Batebi H [5]
- Crispin M [5]
- Stahlberg H [5]
- Fuzik T [5]
- Schoehn G [5]
- Li M [5]
- Belousoff MJ [5]
- Ranson NA [5]
- Ramakrishnan V [5]
- Panova O [5]
- Amunts A [5]
- Yamashita K [5]
- Veesler D [5]
- He F [5]
- Gao Y [5]
- Li D [5]
- Perez-hernandez G [5]
- Hildebrand PW [5]
- Subramaniam S [5]
- Sui SF [4]
- Zhang L [4]
- Frank J [4]
- Schneider C [4]
- Yu EW [4]
- Gu J [4]
- Ke A [4]
- Zheng W [4]
- Danev R [4]
- Brohawn SG [4]
- Ekemezie CL [4]
- Guo H [4]
- Hill CH [4]
- Southworth DR [4]
- Becker T [4]
- Li N [4]
- Noble AJ [4]
- Einsle O [4]
- Sun L [4]
- Deganutti G [4]
- Barford D [4]
- Tian C [4]
- Greber BJ [4]
- Zhang X [4]
- Li X [4]
- Chang YC [4]
- Gao Y [4]
- Rybak MY [4]
- Roth BL [4]
- Brown CR [4]
- Sachse C [4]
- Campbell EA [4]
- Li F [4]
- Tse E [4]
- King NP [4]
- Lu W [4]
- Radford SE [4]
Journal
- NAT COMMUN [9221]
- TO BE PUBLISHED [5314]
- NATURE [4417]
- NAT STRUCT MOL BIOL [2872]
- PNAS [2691]
- SCIENCE [2476]
- BIORXIV [2193]
- CELL [2085]
- SCI ADV [1657]
- MOL CELL [1639]
- ELIFE [1403]
- STRUCTURE [1229]
- CELL REP [1181]
- NUCLEIC ACIDS RES [995]
- EMBO J [658]
- CELL RES [649]
- COMMUN BIOL [638]
- J MOL BIOL [602]
- J VIROL [562]
- J BIOL CHEM [473]
- CELL DISCOV [439]
- NAT CHEM BIOL [435]
- PLOS PATHOG [434]
- NAT MICROBIOL [385]
- ACTA CRYSTALLOGR D STRUCT BIOL [339]
- SCI REP [281]
- NAT METHODS [258]
- J STRUCT BIOL [246]
- MBIO [246]
- NAT PLANTS [223]
- IMMUNITY [203]
- EMBO REP [194]
- PLOS BIOL [182]
- CELL HOST MICROBE [174]
- J AM CHEM SOC [167]
- PROTEIN SCI [157]
- PROTEIN CELL [148]
- J CELL BIOL [145]
- SCI TRANSL MED [129]
- VIRUSES [125]
- NEURON [121]
- NPJ VACCINES [119]
- IUCRJ [98]
- PLOS ONE [96]
- ISCIENCE [95]
- INT J MOL SCI [90]
- LIFE SCI ALLIANCE [90]
- PNAS NEXUS [82]
- J MED CHEM [76]
- J STRUCT BIOL X [74]
- BIOCHEMISTRY [72]
- SCI IMMUNOL [71]
- COMMUN CHEM [70]
- ACS NANO [68]
- CURR BIOL [67]
- SIGNAL TRANSDUCT TARGET THER [62]
- RES SQ [61]
- ADV SCI [59]
- J CLIN INV [54]
- DEV CELL [53]
- ACTA NEUROPATHOL [51]
- BLOOD [51]
- MOL BIOL CELL [51]
- ANGEW CHEM INT ED ENGL [49]
- FEBS J [49]
- INT J BIOL MACROMOL [49]
- RNA [49]
- BIOMOLECULES [48]
- NAT NANOTECHNOL [45]
- FRONT MOL BIOSCI [42]
- MOL PLANT [41]
- NAT CATAL [41]
- BIOCHEM BIOPHYS RES COMMUN [40]
- VIROLOGY [39]
- EBIOMEDICINE [38]
- CELL REP METHODS [36]
- EMERG MICROBES INFECT [35]
- PLANT COMMUN. [33]
- GENES DEV [32]
- BIOCHIM BIOPHYS ACTA MOL CELL BIOL LIPIDS [31]
- FEBS LETT [31]
- NAT CHEM [31]
- NAT IMMUNOL [30]
- FRONT IMMUNOL [29]
- J EXP MED [27]
- NATL SCI REV [27]
- PLANT CELL [27]
- BIOCHEM J [26]
- ACS CHEM BIOL [25]
- CELL REP MED [25]
- J BACTERIOL [25]
- NAT CELL BIOL [25]
- ACTA PHARMACOL.SIN. [24]
- J GEN VIROL [24]
- ACTA CRYSTALLOGR F STRUCT BIOL COMMUN [23]
- BIOCHIM BIOPHYS ACTA BIOENERG [23]
- J.MOL.CELL.CARDIOL. [23]
- NAT MATER [23]
- CELL DEATH DIFFER. [22]
- HLIFE [22]
Software
- RELION [13312]
- CRYOSPARC [12881]
- CTFFIND [2262]
- GCTF [1503]
- TOMOCTF [524]
- IMOD [470]
- WARP [468]
- CISTEM [451]
- IPET [440]
- SPIDER [407]
- FREALIGN [394]
- EMAN [307]
- DYNAMO [297]
- EMAN2 [295]
- COOT [270]
- CHIMERA [193]
- PEET [186]
- PHENIX [159]
- JSPR [138]
- CRYOLO [134]
- PYTOM [131]
- SPHIRE [114]
- MATLAB [109]
- XMIPP [108]
- UCSF CHIMERA [106]
- UCSF CHIMERAX [100]
- IMAGIC [99]
- AUTO3DEM [94]
- AV3 [83]
- EMCLARITY [72]
- NOVACTF [71]
- TOM TOOLBOX [61]
- CTFFIND3 [60]
- NOVASTA [54]
- STOPGAP [54]
- CTFPHASEFLIP [49]
- SPARX [49]
- SITUS [41]
- TOM [41]
- URO [37]
- SIMPLE [35]
- BSOFT [32]
- EMFIT [31]
- MDFF [31]
- APPION [30]
- SCIPION [29]
- EM3DR2 [28]
- ISOLDE [25]
- MPSA [25]
- CTFFIND4 [24]
- J3DR [22]
- SPIDER, APPION [22]
- M [21]
- O [21]
- SUBTOM [21]
- CTFTILT [20]
- IHRSR [20]
- IMAGIC, SPIDER [20]
- IMOD, BSOFT, SPIDER, TOM, PACKAGE, MATLAB [20]
- JALIGN [20]
- EMAN1 [19]
- FREALIX [19]
- SPIDER, FREALIGN [17]
- CRYODRGN [16]
- I3 [16]
- IMAGIC, CUSTOM, SPIDER [16]
- MULTI-PATH SA [16]
- SPIDER, IMAGIC [16]
- APPION, SPIDER, EMAN [15]
- EMAN2, SPARX [15]
- ETOMO [15]
- IMIRS [15]
- EMAN1, EMAN2 [13]
- PHOELIX, SUPRIM [13]
- SPRING [13]
- EMAN, SPIDER [12]
- SPARX/EMAN2 [12]
- AMIRA [11]
- GAP [11]
- IMAGIC-5, SPIDER [11]
- SPIDER PACKAGE [11]
- CHIMERA, SITUS [10]
- EMAN, XMIPP [10]
- FOCUS [10]
- IMOD, BSOFT [10]
- MOTIONCORR2 [10]
- SPIDER, EMAN [10]
- TOPAZ [10]
- AMIRAFPM [9]
- EMREADY [9]
- IMOD, RAPTOR, PROTOMO [9]
- EMAN, FREALIGN [8]
- EMIRA [8]
- EMPFT EM3DR [8]
- IMAGIC, FREALIGN [8]
- MOLREP, CHIMERA [8]
- MRC [8]
- SPIDER, PACKAGE [8]
- CTFIND3 [7]
- DIREX [7]
Microscope
- FEI TITAN KRIOS [28697]
- TFS KRIOS [10128]
- FEI TALOS ARCTICA [2634]
- TFS GLACIOS [1577]
- FEI TECNAI F20 [1092]
- FEI POLARA 300 [837]
- FEI TECNAI SPIRIT [660]
- JEOL CRYO ARM 300 [605]
- FEI TECNAI F30 [595]
- FEI TITAN [555]
- ZEISS LIBRA120PLUS [454]
- FEI TECNAI ARCTICA [392]
- FEI TECNAI 20 [232]
- TFS TALOS [197]
- FEI TECNAI 12 [183]
- FEI/PHILIPS CM200FEG [175]
- JEOL 3200FSC [138]
- JEOL 2200FS [128]
- JEOL CRYO ARM 200 [87]
- FEI/PHILIPS CM300FEG/T [84]
- JEOL 2100F [77]
- TFS TALOS L120C [75]
- JEOL 2010F [70]
- TFS TALOS F200C [65]
- FEI/PHILIPS EM420 [45]
- JEOL 2100 [41]
- TFS TITAN THEMIS [39]
- JEOL 3200FS [35]
- JEOL 1230 [29]
- FEI/PHILIPS CM120T [27]
- JEOL 3100FFC [26]
- FEI MORGAGNI [25]
- JEOL 3000SFF [21]
- JEOL 1200EXII [19]
- TFS TUNDRA [19]
- FEI/PHILIPS CM200T [18]
- JEOL 4000 [17]
- FEI TECNAI 10 [15]
- FEI/PHILIPS CM200FEG/ST [14]
- JEOL 4000EX [14]
- FEI/PHILIPS CM300FEG/HE [13]
- JEOL 1400 [13]
- JEOL 1200EX [12]
- JEOL 1400/HR YPS FEG [11]
- FEI/PHILIPS CM12 [8]
- JEOL 100CX [7]
- JEOL 2000EX [6]
- FEI/PHILIPS CM200FEG/UT [5]
- FEI/PHILIPS CM300FEG/ST [5]
- JEOL 2010 [5]
- JEOL 2200FSC [5]
- JEOL 3100FEF [5]
- FEI TECNAI SPHERA [4]
- FEI/PHILIPS CM10 [4]
- JEOL KYOTO-3000SFF [4]
- OTHER [4]
- HITACHI EF2000 [3]
- JEOL 1000EES [3]
- JEOL 1010 [3]
- JEOL 1200 [3]
- JEOL 2010HT [2]
- JEOL 2010UHR [2]
- FEI/PHILIPS CM200FEG/SOPHIE [1]
- HITACHI H-9500SD [1]
- HITACHI H7600 [1]
- JEOL 2000EXII [1]
- JEOL 2010HC [1]
- JEOL 2011 [1]
- SHUIMU TOTEM 300S [1]
- ZEISS LEO912 [1]
Electron Source
- FIELD EMISSION GUN [48301]
- LAB6 [1557]
- OTHER [248]
- TUNGSTEN HAIRPIN [139]
Film or detector model
- GATAN K3 6K X 4K [13381]
- GATAN K3 BIOQUANTUM 6K X 4K [10442]
- GATAN K2 SUMMIT 4K X 4K [9999]
- FEI FALCON IV 4K X 4K [4648]
- FEI FALCON III 4K X 4K [2948]
- GATAN K2 QUANTUM 4K X 4K [1785]
- FEI FALCON II 4K X 4K [1168]
- TFS FALCON 4I 4K X 4K [967]
- GATAN ULTRASCAN 4000 4K X 4K [880]
- KODAK SO-163 FILM [781]
- TVIPS TEMCAM-F416 4K X 4K [519]
- GATAN K3 BIOCONTINUUM 6K X 4K [458]
- FEI EAGLE 4K X 4K [420]
- OTHER [323]
- FEI CETA 4K X 4K [281]
- GATAN K2 BASE 4K X 4K [199]
- DIRECT ELECTRON DE-20 5K X 3K [120]
- GENERIC GATAN 4K X 4K [90]
- GATAN ULTRASCAN 1000 2K X 2K [86]
- GENERIC CCD [69]
- TVIPS TEMCAM-F415 4K X 4K [60]
- GENERIC TVIPS 4K X 4K [57]
- FEI EAGLE 2K X 2K [52]
- DIRECT ELECTRON DE-64 8K X 8K [48]
- FEI FALCON I 4K X 4K [42]
- GATAN K2 IS 4K X 4K [40]
- GENERIC GATAN [35]
- DIRECT ELECTRON DE-16 4K X 4K [32]
- DIRECT ELECTRON APOLLO 4K X 4K [30]
- TVIPS TEMCAM-F816 8K X 8K [30]
- GATAN MULTISCAN [22]
- DIRECT ELECTRON DE-10 5K X 4K [20]
- DIRECT ELECTRON DE-12 4K X 3K [20]
- TVIPS TEMCAM-F216 2K X 2K [17]
- TVIPS TEMCAM-F224 2K X 2K [14]
- DECTRIS SINGLA 1K X 1K [12]
- GENERIC FILM [11]
- KODAK 4489 FILM [11]
- AGFA SCIENTA FILM [9]
- GENERIC TVIPS [9]
- GATAN K2 4K X 4K [7]
- GENERIC GATAN 2K X 2K [7]
- DECTRIS ELA 1K X 0.5K [6]
- GATAN ALPINE 2.3K X 3.2K [5]
- GATAN ORIUS SC200 2K X 2K [5]
- SIA 15C 3K X 3K [4]
- GENERIC TVIPS 2K X 2K [3]
- GATAN ORIUS SC1000 4K X 2.7K [2]
- GATAN ORIUS SC600 2.7K X 2.7K [2]
- GATAN ULTRASCAN 10000 10K X 10K [2]
- GENERIC IMAGE PLATES [2]
- DECTRIS ARINA 0.2K X 0.2K [1]
- GENERIC CCD 2K X 2K [1]
- PROSCAN TEM-PIV 2K X 2K [1]
External links
- PDB [1147]
- UniProt [1089]
- PDBe-Kb [993]
- AlphaFold DB [932]
- InterPro [915]
- Gene Ontology [850]
- Pfam [832]
- ChEBI [648]
- ChEMBL [595]
- DrugBank [533]
- Complex Portal [305]
- EMPIAR [107]
- SCOP2 [27]
- CATH [12]
