Electron Microscopy Data Bank

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natural_source_ncbi_code:"10116"

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Current Database

Current status

Sample type

Organism

Rattus norvegicus [1134]
Homo sapiens [247]
Bos taurus [145]
Mus musculus [121]
Synthetic construct [90]
Lama glama [33]
Cricetulus griseus [32]
(no species) [20]
Cricetus cricetus [15]
Escherichia coli [11]
Aequorea victoria [11]
Oryctolagus cuniculus [11]
Cyriopagopus schmidti [5]
Legionella pneumophila [5]
Mesocricetus auratus [4]
Legionella pneumophila [4]
Canavalia ensiformis [4]
Murid herpesvirus 1 [4]
Oplophorus gracilirostris [4]
Sus scrofa [4]
Mus musculoides [3]
Gallus gallus [3]
Canis lupus [3]
Mus musculus polyomavirus 1 [2]
Cricket paralysis virus [2]
Rat cytomegalovirus (isolate england) [2]
Mus musculus polyomavirus 1 [2]
Recombinant vesicular stomatitis indiana virus rvsv-g/gfp [2]
Leiurus quinquestriatus [2]
Bungarus multicinctus [2]
Equus quagga [2]
(no species) [1]
(no species) [1]
Rattus rattus [1]
Carnivore protoparvovirus 1 [1]
Simian immunodeficiency virus [1]
(no species) [1]
Severe acute respiratory syndrome coronavirus [1]
Vicugna pacos [1]
Bacteriophage sp. [1]
Komagataella pastoris [1]
Saccharomyces cerevisiae [1]
Rattus nativitatis [1]
Amanita phalloides [1]
Spodoptera frugiperda [1]
Xenopus laevis [1]
(no species) [1]
Dendroaspis angusticeps [1]
Escherichia coli [1]
Crossoptilon auritum [1]
Meleagris gallopavo [1]

EM Method

Resolution

Model molecular weight

Release Date

Author by name

Sobolevsky AI [73]
Yelshanskaya MV [72]
Xu HE [65]
Gouaux E [62]
Cheng Y [53]
Greger IH [51]
Wang MW [50]
Zhou Q [48]
Gangwar SP [47]
Julius D [47]
Nakagawa T [47]
Rubinstein JL [46]
Ho H [41]
Yang D [41]
Abbas YM [40]
Jiang Y [39]
Zhang Y [39]
Brunger AT [38]
Wang Y [38]
Yen LY [38]
Cais O [36]
Furukawa H [36]
Baumeister W [35]
Ivica J [32]
Stockwell I [32]
Twomey EC [32]
Yamashita K [31]
Zhang D [31]
Zhang K [31]
Herguedas B [30]
Nureki O [30]
Yoshioka C [30]
Krieger JM [29]
Bowie D [28]
Dai A [28]
Nishizawa T [28]
Pfuetzner RA [28]
Shihoya W [28]
White KI [28]
Zhao Y [28]
Moiseenkova-bell VY [27]
Tajima N [27]
Zhang H [27]
Zhang M [26]
Campbell MG [25]
Miguez-cabello FJ [25]
Wang XT [25]
Xu Y [25]
Zhang X [25]
Balaji A [24]
Carragher B [24]
Cong Z [24]
Couoh-cardel S [24]
Diao J [24]
Esquivies L [24]
Khan YA [24]
Li Y [24]
Marletta MA [24]
Potter CS [24]
Qiu K [24]
Underbakke ES [24]
Jalali-yazdi F [23]
Liu W [23]
Martinez-sanchez A [23]
Pumroy RA [23]
Shyng SL [23]
Yang DH [23]
Chen L [22]
Yuan Q [22]
Zhao F [22]
Zhou QT [22]
Dai AT [21]
He X [21]
Newton TP [21]
Zhang C [21]
Chou TH [20]
Vega-gutierrez C [20]
Wang J [20]
Cheng X [19]
Chowdhury S [19]
Driggers CM [19]
Frost A [19]
Kurnikova MG [19]
Zhao LH [19]
Zhou XE [19]
Zhuang Y [19]
Bueler SA [18]
Chen LN [18]
Kumar J [18]
Sano FK [18]
Xia T [18]
Zhao FH [18]
Beck F [17]
Chiu W [17]
Cong ZT [17]
Fang CL [17]
Greger I [17]
Jara-oseguera A [17]
Kobayashi K [17]
Melcher K [17]

Author by ORCID

Xu HE [54]
Cheng Y [53]
Greger IH [51]
Gangwar SP [47]
Sobolevsky AI [39]
Brunger AT [38]
Nakagawa T [38]
Wang MW [36]
Furukawa H [36]
Ho H [35]
Yang D [35]
Twomey EC [32]
Gouaux E [31]
Herguedas B [30]
White KI [28]
Bowie D [28]
Zhang Y [28]
Tajima N [27]
Zhang K [26]
Wang XT [25]
Miguez-cabello FJ [25]
Balaji A [24]
Couoh-cardel S [24]
Yamashita K [24]
Khan YA [24]
Campbell MG [24]
Underbakke ES [24]
Diao J [24]
Newton TP [21]
Chou TH [20]
Nureki O [20]
Shihoya W [20]
Vega-gutierrez C [20]
Driggers CM [19]
Kurnikova MG [19]
Frost A [19]
Zhou Q [18]
Zhao Y [18]
Rubinstein JL [18]
Kumar J [18]
Jara-oseguera A [17]
Watson JF [17]
Sano FK [17]
Sheldon N [17]
Ivica J [16]
Baradaran R [16]
Melcher K [16]
Kikkawa M [15]
Zuckerman DM [15]
Zhuang Y [15]
Zubcevic L [15]
Russo JD [15]
Karuppan S [15]
Schrag LG [15]
He X [14]
Goto S [14]
Jiang Y [14]
Lee Y [14]
Hosojima M [14]
Mancino A [14]
Martinez-sanchez A [14]
Saito A [14]
Moss 3Rd Fr [14]
Julius D [14]
Arnold WR [14]
Takemoto K [14]
Fricke TC [14]
Komochi K [14]
Krieger JM [13]
Lee SY [13]
Picanol-parraga J [13]
Kwon DH [13]
Chiu W [13]
Xu P [13]
Subramaniam S [13]
Abbas YM [12]
Mahamid J [12]
Robinson CV [12]
Moiseenkova-bell V [12]
Pumroy RA [12]
Yin W [12]
Shyng SL [12]
Leffler A [12]
Akasaka H [12]
Tanaka T [11]
Jayaraman V [11]
Chen L [11]
Mao C [10]
Newstead S [10]
Jones DR [10]
Moiseenkova-bell VY [10]
Ludtke SJ [10]
Romero-hernandez A [10]
Korman A [10]
Fang CL [10]
Skiniotis G [10]
Parker JL [10]
Lucic V [10]
Laugks U [10]
Biggin PC [9]

Journal

NAT COMMUN [172]
NATURE [150]
NAT STRUCT MOL BIOL [131]
PNAS [109]
CELL [93]
TO BE PUBLISHED [90]
BIORXIV [56]
SCIENCE [56]
ELIFE [47]
SCI ADV [27]
COMMUN BIOL [22]
MOL CELL [22]
CELL RES [20]
CELL REP [19]
J MOL BIOL [16]
EMBO J [14]
STRUCTURE [14]
CELL DISCOV [9]
FEBS J [9]
J CELL BIOL [9]
NEURON [9]
EMBO REP [6]
J.NEUROSCI. [6]
NAT CHEM BIOL [6]
ACTA PHARMACOL.SIN. [5]
J BIOL CHEM [5]
ACTA CRYSTALLOGR D STRUCT BIOL [4]
BIOCHEM BIOPHYS RES COMMUN [4]
INT J MOL SCI [4]
J MICROSC [4]
J STRUCT BIOL [4]
PLOS BIOL [4]
RES SQ [4]
SCI REP [4]
BIOCHEMISTRY [3]
BIOCHIM BIOPHYS ACTA [3]
JACS AU [3]
NAT CELL BIOL [3]
ACS CENT SCI [2]
ACTA PHARM SIN B [2]
CHEMPLUSCHEM [2]
EXP.MOL.MED. [2]
FEBS LETT [2]
INT J BIOL MACROMOL [2]
J VIS EXP [2]
NAT NEUROSCI [2]
CELL HOST MICROBE [1]
IUCRJ [1]
J AM CHEM SOC [1]
J VIROL [1]
J.MUSCLE RES.CELL.MOTIL. [1]
MICROSCOPY [1]
MOL PSYCHIATRY [1]
NANOTECHNOL RUSSIA [1]
NAT CARDIOVASC RES [1]
SIGNAL TRANSDUCT TARGET THER [1]

Software

RELION [333]
CRYOSPARC [238]
CTFFIND [42]
CISTEM [35]
SPIDER [27]
IMOD [25]
CHIMERA [12]
COOT [11]
IMAGIC [7]
PHOELIX, SUPRIM [7]
UCSF CHIMERAX [7]
GCTF [6]
TOM TOOLBOX [6]
NOVACTF [5]
PYTOM [5]
SPIDER,XMIPP,IHRSR [5]
UNBLUR, CTFFIND4, FREALIGN [5]
XMIPP [5]
AV3 [4]
CHIMERA, PHENIX [4]
DYNAMO [4]
EMAN [4]
EMAN2 [3]
PHENIX [3]
SITUS,CHIMERA [3]
STOPGAP [3]
TOM [3]
AMIRAFPM [2]
ETOMO, TOM, PYTOM [2]
MATLAB [2]
MRC [2]
PHOELIX, SUPREME [2]
SPIDER, FREALIGN [2]
SPIER, IMAGIC, BKRP [2]
SUBTOM [2]
AMIRA [1]
CHIMERA AND NAMD2 [1]
CHIMERA, FLEX-EM [1]
CTFFIND3 [1]
CTFFIND4 [1]
EMAN1.9 [1]
EMAN2, RELION, SPIDER [1]
ETOMO [1]
ETOMO/SERIAL, EM [1]
FREALIGN [1]
IMAGIC, FREALIGN [1]
IMAGIC, SPIDER, IN-HOUSE, SOFTWARE [1]
PEET [1]
PYSEG [1]
RELION, 1.3 [1]
RELION_1.3, EMAN_2.1 [1]
SPIDER, EMAN1 [1]
SPIDER, IHRSR [1]
SPIDER, IMAGIC, BKRP [1]
UCSF CHIMERA [1]
WARP [1]
XMIPP, RELION [1]

Microscope

Electron Source

Film or detector model

External links

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EMD-62649

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Structure of beta-arrestin1 in complex with mouse C5aR1pp

Release date: Nov. 26, 2025
Resolution: 2.72 Å
EM Method: Single-particle
Fitted PDBs: 9kyu
Q-score: 0.567

Mishra S, Yadav MK, Dalal A, Ganguly M, Yadav R, Sawada K, Tiwari D, Roy N, Banerjee N, Fung JN, Marallag J, Cui CS, Li XX, Lee JD, Dsouza CA, Saha S, Sarma P, Rawat G, Zhu H, Khant HA, Clark RJ, Sano FK, Banerjee R, Woodruff TM, Nureki O, Gati C, Shukla AK