Filter By
Current Database
- EMDB [54485]
Current status
- REL [54485]
Sample type
- Complex [43789]
- Protein [36476]
- Ligand [20179]
- RNA [4763]
- Virus [3777]
- Sample [3679]
- DNA [3396]
- Cellular component [3217]
- Cell [1721]
- Tissue [290]
- Other [247]
- Em label [3]
Organism
- Homo sapiens [19421]
- Synthetic construct [3819]
- Mus musculus [3563]
- Escherichia coli [3025]
- Saccharomyces cerevisiae [2552]
- Severe acute respiratory syndrome coronavirus [2504]
- Rattus norvegicus [1218]
- Bos taurus [1160]
- Escherichia coli [1109]
- Human immunodeficiency virus 1 [1046]
- Oryctolagus cuniculus [955]
- Sus scrofa [903]
- Xenopus laevis [845]
- Saccharomyces cerevisiae [784]
- Lama glama [580]
- Arabidopsis thaliana [518]
- Chlamydomonas reinhardtii [413]
- Macaca mulatta [405]
- Drosophila melanogaster [335]
- Mycolicibacterium smegmatis [324]
- Influenza a virus [298]
- Bacillus subtilis [267]
- Mycobacterium tuberculosis [258]
- Gallus gallus [248]
- Tetrahymena thermophila [216]
- Escherichia coli [182]
- Caenorhabditis elegans [178]
- Pseudomonas aeruginosa [177]
- Staphylococcus aureus [175]
- Vicugna pacos [174]
- Enterobacteria phage m13 [166]
- Thermus thermophilus [164]
- Chaetomium thermophilum [163]
- Danio rerio [163]
- Mycobacterium tuberculosis [144]
- Saccharomyces cerevisiae [136]
- Leishmania tarentolae [136]
- Enterobacteria phage t4 [135]
- Salmonella enterica [128]
- Bacillus subtilis [126]
- Ovis aries [126]
- Chaetomium thermophilum [123]
- (no species) [122]
- Escherichia virus t7 [117]
- Schizosaccharomyces pombe [117]
- Synechocystis sp. pcc 6803 [116]
- Plasmodium falciparum [115]
- Bacillus sp. (strain ps3) [113]
- Plasmodium falciparum [110]
- Vibrio cholerae [105]
- Mycolicibacterium smegmatis [103]
- Streptococcus pyogenes [98]
- Pseudomonas aeruginosa [95]
- Severe acute respiratory syndrome coronavirus [95]
- Trypanosoma brucei [91]
- Spinacia oleracea [89]
- Mycoplasma pneumoniae [88]
- Aequorea victoria [87]
- Hepatitis b virus [86]
- African swine fever virus [86]
- Escherichia coli [78]
- Cricetulus griseus [77]
- Sus scrofa [76]
- Monkeypox virus [74]
- Human immunodeficiency virus [72]
- Human cytomegalovirus [70]
- Thermus thermophilus [70]
- Human herpesvirus 1 [69]
- Zaire ebolavirus [69]
- Thermoplasma acidophilum [69]
- Middle east respiratory syndrome-related coronavirus [68]
- Legionella pneumophila [68]
- Clostridioides difficile [67]
- Chikungunya virus [67]
- Macaca fascicularis [67]
- Schizosaccharomyces pombe [65]
- Canis lupus [64]
- Saccharomyces cerevisiae [63]
- Pseudomonas phage phi6 [62]
- Salmonella enterica [62]
- (no species) [61]
- Nostoc sp. (strain pcc 7120 / sag 25.82 / utex 2576) [61]
- Eastern equine encephalitis virus [61]
- Klebsiella pneumoniae [61]
- Enterobacteria phage t4 [60]
- Adeno-associated virus [60]
- Polytomella sp. pringsheim 198.80 [59]
- Lassa mammarenavirus [57]
- Neurospora crassa [56]
- Trypanosoma brucei [56]
- Escherichia phage lambda [55]
- Dna molecule [55]
- Dictyostelium discoideum [55]
- Enterovirus d [55]
- Amanita phalloides [55]
- Equus caballus [55]
- Zika virus [53]
- Epstein-barr virus (strain gd1) [52]
- Clostridium botulinum [52]
- Porphyridium purpureum [52]
EM Method
- Single-particle [46362]
- Subtomogram averaging [2943]
- Tomography [2586]
- Helical reconstruction [2404]
- Electron Crystallography [190]
Resolution
- < 2Å [413]
- ≥ 2Å and < 3Å [11023]
- ≥ 3Å and < 4Å [22384]
- ≥ 4Å and < 5Å [5436]
- ≥ 5Å and < 6Å [1290]
- ≥ 6Å and < 8Å [2709]
- ≥ 8Å and < 12Å [2360]
- ≥ 12Å and < 16Å [1324]
- ≥ 16Å and < 20Å [1065]
- ≥ 20Å and < 30Å [2825]
- ≥ 30Å [1960]
Model molecular weight
- 0-50 kDa [24]
- 50-100 kDa [89]
- 100-250 kDa [372]
- 250-500 kDa [309]
- 500-1000 kDa [177]
- 1-2 MDa [86]
- 2-5 MDa [81]
- 5-10 MDa [15]
- > 10 MDa [14]
Release Date
- 2026 [1991]
- 2025 [11630]
- 2024 [9268]
- 2023 [7724]
- 2022 [6105]
- 2021 [4461]
- 2020 [3798]
- 2019 [2416]
- 2018 [1748]
- 2017 [1090]
- 2016 [1039]
- 2015 [633]
- 2014 [593]
- 2013 [513]
- 2012 [394]
- 2011 [248]
- 2010 [209]
- 2009 [207]
- 2008 [54]
- 2007 [129]
- 2006 [120]
- 2005 [38]
- 2004 [33]
- 2003 [39]
- 2002 [5]
Author by name
- Liu J [1931]
- Zhang Y [1729]
- Ward AB [1680]
- Wang Y [1628]
- Zhang X [1593]
- Wang X [1360]
- Ren G [1236]
- Liu Y [1174]
- Li Y [1168]
- Wang J [1115]
- Zhang M [1115]
- Zhang Z [1096]
- Li X [1029]
- Li S [992]
- Li Z [980]
- Zhang L [922]
- Li J [915]
- Zhang J [888]
- Chen Y [845]
- Wang L [818]
- Wang S [789]
- Gao Y [781]
- Wang H [772]
- Li H [701]
- Liu S [688]
- Zhang S [680]
- Zhou ZH [671]
- Chen Z [652]
- Chen X [650]
- Wang C [642]
- Shi Y [628]
- Liu H [616]
- Liu X [614]
- Liu Z [602]
- Liu C [601]
- Zhang K [592]
- Wu H [584]
- Xu Y [580]
- Zhu Y [578]
- Wang Q [575]
- Li D [574]
- Yang Y [568]
- Liu L [567]
- Zhang H [567]
- Wang Z [554]
- Beckmann R [553]
- Jiang Y [545]
- Chen J [536]
- Zhao Y [535]
- Cottrell CA [505]
- Xu J [498]
- Han J [497]
- Li W [490]
- Burton DR [486]
- Yang X [481]
- Huang Y [478]
- Cheng J [472]
- Chiu W [469]
- Zhou L [453]
- Yu X [449]
- Ozorowski G [447]
- Wilson IA [445]
- Xu C [444]
- Hu Z [438]
- Zhang C [434]
- Zhang R [419]
- Zhang P [407]
- Chen L [404]
- Sewall LM [402]
- Torres JL [401]
- Sanders RW [399]
- Wang F [399]
- Wang P [398]
- Zhang W [398]
- Wu C [395]
- Zhu X [395]
- Sun Y [394]
- Zhao J [393]
- Wu J [391]
- Zhou Q [388]
- Cheng Y [385]
- Berninghausen O [384]
- Zhang Q [384]
- Zhao X [382]
- Zhou Y [380]
- Wang M [377]
- Kotecha A [376]
- Liu JF [374]
- Li L [373]
- Yang F [371]
- Cramer P [370]
- Brown A [369]
- Lu Y [365]
- Rubinstein JL [364]
- Wu Y [364]
- Li M [363]
- Zhou J [363]
- Yu Z [362]
- Zhang B [360]
- Kwong PD [358]
Author by ORCID
- Skiniotis G [12]
- Xu HE [11]
- Ward AB [10]
- Li H [10]
- Gao GF [10]
- Gao N [10]
- Kotecha A [9]
- Chiu W [9]
- Rubinstein JL [9]
- Kobilka BK [8]
- Zhang K [8]
- Chai P [8]
- Kwong PD [8]
- He X [7]
- Scheres SHW [7]
- Liu B [7]
- Qi J [7]
- Plevka P [7]
- Blaza JN [6]
- Kurumizaka H [6]
- Robinson CV [6]
- Sexton PM [6]
- Raunser S [6]
- Cheng Y [6]
- Kuhlbrandt W [6]
- Cottrell CA [6]
- Ranson NA [6]
- Gmeiner P [6]
- Ramakrishnan V [6]
- Goedert M [6]
- Shirouzu M [6]
- Xu F [6]
- Zhang P [6]
- Papasergi-scott MM [6]
- Sun JP [6]
- Wilson DN [6]
- Beckmann R [6]
- Wootten D [6]
- Egelman EH [6]
- Hilger D [5]
- Frank J [5]
- Czarnocki-cieciura M [5]
- Baker D [5]
- Xu Y [5]
- Mclaughlin SH [5]
- Wang Y [5]
- Skowronek K [5]
- Kollman JM [5]
- Batebi H [5]
- Crispin M [5]
- Stahlberg H [5]
- Fuzik T [5]
- Schoehn G [5]
- Li M [5]
- Belousoff MJ [5]
- Sun M [5]
- Panova O [5]
- Amunts A [5]
- Yamashita K [5]
- Veesler D [5]
- He F [5]
- Gao Y [5]
- Li D [5]
- Perez-hernandez G [5]
- Hildebrand PW [5]
- Wang F [5]
- Subramaniam S [5]
- Sui SF [4]
- Zhang L [4]
- Schneider C [4]
- Yu EW [4]
- Gu J [4]
- Ke A [4]
- Zheng W [4]
- Danev R [4]
- Brohawn SG [4]
- Ekemezie CL [4]
- Guo H [4]
- Hill CH [4]
- Southworth DR [4]
- Becker T [4]
- Li N [4]
- Noble AJ [4]
- Einsle O [4]
- Sun L [4]
- Deganutti G [4]
- Barford D [4]
- Tian C [4]
- Greber BJ [4]
- Brown A [4]
- Zhang X [4]
- Li X [4]
- Chang YC [4]
- Gao Y [4]
- Rybak MY [4]
- Roth BL [4]
- Jiang Y [4]
- Brown CR [4]
- Sachse C [4]
- Campbell EA [4]
Journal
- NAT COMMUN [9886]
- TO BE PUBLISHED [5522]
- NATURE [4673]
- PNAS [3196]
- NAT STRUCT MOL BIOL [3010]
- SCIENCE [2729]
- BIORXIV [2345]
- CELL [2304]
- MOL CELL [1738]
- SCI ADV [1717]
- ELIFE [1690]
- STRUCTURE [1432]
- CELL REP [1259]
- NUCLEIC ACIDS RES [1027]
- EMBO J [717]
- J MOL BIOL [662]
- CELL RES [660]
- COMMUN BIOL [657]
- J VIROL [630]
- J BIOL CHEM [530]
- PLOS PATHOG [503]
- NAT MICROBIOL [474]
- CELL DISCOV [449]
- NAT CHEM BIOL [435]
- ACTA CRYSTALLOGR D STRUCT BIOL [349]
- SCI REP [326]
- J STRUCT BIOL [317]
- NAT METHODS [308]
- MBIO [271]
- NAT PLANTS [229]
- IMMUNITY [214]
- EMBO REP [207]
- PLOS BIOL [206]
- CELL HOST MICROBE [193]
- J CELL BIOL [180]
- J AM CHEM SOC [173]
- PROTEIN SCI [162]
- PROTEIN CELL [157]
- SCI TRANSL MED [129]
- VIRUSES [127]
- NEURON [121]
- NPJ VACCINES [119]
- PLOS ONE [112]
- IUCRJ [102]
- ISCIENCE [98]
- LIFE SCI ALLIANCE [97]
- INT J MOL SCI [93]
- DEV CELL [85]
- PNAS NEXUS [84]
- BIOCHEMISTRY [79]
- J STRUCT BIOL X [78]
- J MED CHEM [76]
- CURR BIOL [75]
- SCI IMMUNOL [71]
- ACS NANO [70]
- COMMUN CHEM [70]
- MOL BIOL CELL [64]
- SIGNAL TRANSDUCT TARGET THER [63]
- RES SQ [61]
- ADV SCI [60]
- ACTA NEUROPATHOL [57]
- J CLIN INV [55]
- FRONT ENDOCRINOL [53]
- ANGEW CHEM INT ED ENGL [52]
- BLOOD [52]
- NAT NANOTECHNOL [50]
- FEBS J [49]
- INT J BIOL MACROMOL [49]
- RNA [49]
- BIOCHEM BIOPHYS RES COMMUN [48]
- BIOMOLECULES [48]
- VIROLOGY [46]
- FRONT MOL BIOSCI [45]
- FEBS LETT [44]
- NAT CATAL [43]
- MOL PLANT [41]
- NAT CELL BIOL [40]
- EBIOMEDICINE [38]
- GENES DEV [37]
- MOL MICROBIOL [37]
- NAT CHEM [37]
- ACS CENT SCI [36]
- CELL REP METHODS [36]
- EMERG MICROBES INFECT [35]
- ISME J [35]
- J BACTERIOL [34]
- PLANT COMMUN. [33]
- J CELL SCI [32]
- BIOCHIM BIOPHYS ACTA MOL CELL BIOL LIPIDS [31]
- NAT IMMUNOL [30]
- BIOCHEM J [29]
- FRONT IMMUNOL [29]
- J EXP MED [27]
- J GEN VIROL [27]
- NATL SCI REV [27]
- PLANT CELL [27]
- ACS CHEM BIOL [25]
- CELL REP MED [25]
- FRONT MICROBIOL [25]
- OPEN BIOL [25]
Software
- RELION [13758]
- CRYOSPARC [12941]
- CTFFIND [2342]
- GCTF [1522]
- IMOD [1114]
- SPIDER [785]
- TOMOCTF [533]
- CHIMERA [489]
- WARP [486]
- CISTEM [465]
- IPET [445]
- FREALIGN [437]
- EMAN2 [368]
- EMAN [348]
- DYNAMO [313]
- COOT [283]
- PEET [214]
- PHENIX [211]
- XMIPP [157]
- IMAGIC [144]
- JSPR [141]
- CRYOLO [134]
- PYTOM [134]
- UCSF CHIMERA [124]
- SPHIRE [115]
- MATLAB [110]
- UCSF CHIMERAX [102]
- AUTO3DEM [93]
- ETOMO [86]
- AV3 [83]
- NOVACTF [79]
- EMCLARITY [72]
- TOMO3D [66]
- CTFPHASEFLIP [65]
- SPARX [65]
- CTFFIND3 [62]
- TOM TOOLBOX [62]
- EMAN2, SPARX [61]
- NOVASTA [61]
- STOPGAP [56]
- SITUS [53]
- TOM [48]
- AIMLESS [46]
- MDFF [46]
- MRC [43]
- BSOFT [42]
- IMAGIC, SPIDER [42]
- SPIDER, APPION [39]
- URO [38]
- SPIDER, FREALIGN [37]
- PROTOMO [36]
- SIMPLE [36]
- EMFIT [33]
- APPION, SPIDER [32]
- CTFFIND3, RELION [31]
- IHRSR [31]
- APPION [30]
- SPRING [30]
- SCIPION [29]
- EM3DR2 [28]
- EMAN1 [27]
- CHIMERA, SITUS [26]
- MPSA [26]
- IMIRS [25]
- ISOLDE [25]
- CTFFIND4 [24]
- IMOD, PEET [24]
- EMAN2, RELION [22]
- J3DR [22]
- O [22]
- I3 [21]
- M [21]
- MOTIONCORR2 [21]
- SUBTOM [21]
- CTFTILT [20]
- FREALIX [20]
- IMOD, BSOFT, SPIDER, TOM, PACKAGE, MATLAB [20]
- IMOD, TOMO3D [20]
- JALIGN [20]
- CHIMERA, MDFF [19]
- EMAN1, EMAN2 [18]
- IMOD, TOMO3D, PEET [18]
- SERIALEM [18]
- SPIDER, RELION [18]
- TOMOALIGN [18]
- APPION, SPIDER, SPARX, EMAN2 [17]
- CHIMERA, COOT [17]
- MOLREP [17]
- SPIDER, IMAGIC [17]
- CRYODRGN [16]
- IMAGIC, CUSTOM, SPIDER [16]
- MULTI-PATH SA [16]
- POINTLESS [16]
- UNBLUR, CTFFIND4, FREALIGN [16]
- APPION, SPIDER, EMAN [15]
- COMET [15]
- EMAN, SPIDER [15]
- IMAGIC-5 [15]
- IMOD, DYNAMO [15]
- RELION, CTFFIND3 [15]
Microscope
- FEI TITAN KRIOS [30706]
- TFS KRIOS [10505]
- FEI TALOS ARCTICA [2711]
- TFS GLACIOS [1601]
- FEI TECNAI F20 [1544]
- FEI POLARA 300 [1219]
- FEI TECNAI SPIRIT [756]
- FEI TECNAI F30 [664]
- FEI TITAN [629]
- JEOL CRYO ARM 300 [610]
- ZEISS LIBRA120PLUS [478]
- FEI TECNAI ARCTICA [395]
- FEI TECNAI 20 [309]
- FEI TECNAI 12 [270]
- FEI/PHILIPS CM200FEG [244]
- TFS TALOS [204]
- JEOL 3200FSC [203]
- JEOL 2200FS [176]
- FEI/PHILIPS CM300FEG/T [117]
- JEOL 2010F [114]
- JEOL 2100F [97]
- JEOL CRYO ARM 200 [87]
- TFS TALOS L120C [75]
- TFS TALOS F200C [66]
- JEOL 2100 [64]
- JEOL 3200FS [50]
- FEI/PHILIPS EM420 [47]
- JEOL 1230 [43]
- JEOL 3100FFC [42]
- TFS TITAN THEMIS [39]
- FEI/PHILIPS CM120T [38]
- OTHER [33]
- JEOL 1400 [31]
- FEI MORGAGNI [28]
- JEOL 3000SFF [27]
- JEOL KYOTO-3000SFF [24]
- JEOL 4000EX [23]
- FEI/PHILIPS CM200FEG/ST [22]
- FEI/PHILIPS CM200T [21]
- JEOL 1200EXII [21]
- JEOL 2200FSC [19]
- TFS TUNDRA [19]
- JEOL 4000 [17]
- FEI TECNAI 10 [15]
- JEOL 1200EX [15]
- FEI/PHILIPS CM300FEG/HE [14]
- JEOL 1400/HR YPS FEG [11]
- FEI/PHILIPS CM200FEG/UT [10]
- FEI/PHILIPS CM12 [8]
- JEOL 2010 [8]
- FEI TECNAI SPHERA [6]
- FEI/PHILIPS CM300FEG/ST [6]
- JEOL 100CX [6]
- JEOL 2000EX [6]
- JEOL 3100FEF [6]
- FEI/PHILIPS CM10 [4]
- JEOL 1010 [4]
- HITACHI EF2000 [3]
- HITACHI H-9500SD [3]
- JEOL 1000EES [3]
- JEOL 1200 [3]
- FEI/PHILIPS EM400 [2]
- JEOL 2010HC [2]
- JEOL 2010HT [2]
- JEOL 2010UHR [2]
- FEI/PHILIPS CM200FEG/SOPHIE [1]
- HITACHI H7600 [1]
- JEOL 2000EXII [1]
- JEOL 2011 [1]
- SHUIMU TOTEM 300S [1]
- ZEISS LEO912 [1]
Electron Source
- FIELD EMISSION GUN [52151]
- LAB6 [1834]
- OTHER [298]
- TUNGSTEN HAIRPIN [203]
Film or detector model
- GATAN K3 6K X 4K [13678]
- GATAN K3 BIOQUANTUM 6K X 4K [10765]
- GATAN K2 SUMMIT 4K X 4K [10718]
- FEI FALCON IV 4K X 4K [4815]
- FEI FALCON III 4K X 4K [3007]
- GATAN K2 QUANTUM 4K X 4K [2192]
- FEI FALCON II 4K X 4K [1490]
- GATAN ULTRASCAN 4000 4K X 4K [1242]
- TFS FALCON 4I 4K X 4K [995]
- KODAK SO-163 FILM [980]
- TVIPS TEMCAM-F416 4K X 4K [881]
- GATAN K3 BIOCONTINUUM 6K X 4K [529]
- FEI EAGLE 4K X 4K [492]
- OTHER [386]
- FEI CETA 4K X 4K [339]
- GATAN K2 4K X 4K [228]
- GATAN K2 BASE 4K X 4K [211]
- TVIPS TEMCAM-F415 4K X 4K [168]
- DIRECT ELECTRON DE-20 5K X 3K [144]
- GENERIC GATAN 4K X 4K [109]
- GENERIC CCD [108]
- GATAN ULTRASCAN 1000 2K X 2K [106]
- FEI FALCON I 4K X 4K [80]
- GENERIC TVIPS 4K X 4K [77]
- FEI EAGLE 2K X 2K [59]
- TVIPS TEMCAM-F816 8K X 8K [52]
- DIRECT ELECTRON DE-64 8K X 8K [48]
- GATAN MULTISCAN [48]
- GENERIC GATAN [44]
- DIRECT ELECTRON DE-16 4K X 4K [40]
- GATAN K2 IS 4K X 4K [40]
- TVIPS TEMCAM-F224 2K X 2K [36]
- DIRECT ELECTRON APOLLO 4K X 4K [30]
- DIRECT ELECTRON DE-12 4K X 3K [30]
- DIRECT ELECTRON DE-10 5K X 4K [22]
- TVIPS TEMCAM-F216 2K X 2K [18]
- GENERIC GATAN 2K X 2K [16]
- AGFA SCIENTA FILM [12]
- DECTRIS SINGLA 1K X 1K [12]
- KODAK 4489 FILM [12]
- GATAN ORIUS SC200 2K X 2K [11]
- GENERIC CCD 2K X 2K [11]
- GENERIC FILM [11]
- GENERIC TVIPS [11]
- GATAN ORIUS SC1000 4K X 2.7K [7]
- DECTRIS ELA 1K X 0.5K [6]
- GATAN ULTRASCAN 10000 10K X 10K [6]
- GATAN ALPINE 2.3K X 3.2K [5]
- SIA 15C 3K X 3K [4]
- GENERIC IMAGE PLATES [3]
- GENERIC TVIPS 2K X 2K [3]
- GATAN ORIUS SC600 2.7K X 2.7K [2]
- DECTRIS ARINA 0.2K X 0.2K [1]
- PROSCAN TEM-PIV 2K X 2K [1]
External links
- PDB [1174]
- UniProt [1104]
- PDBe-Kb [1006]
- AlphaFold DB [945]
- InterPro [920]
- Gene Ontology [856]
- Pfam [835]
- ChEBI [652]
- ChEMBL [600]
- DrugBank [538]
- Complex Portal [307]
- EMPIAR [107]
- SCOP2 [27]
- CATH [12]
Resolution: 2.84 Å
EM Method: Single-particle
Fitted PDBs: 8v9t
Q-score: 0.385
Shatarupa A, Brown D, Olinares PDB, Chase J, Isiorho E, Chait BT, Jeruzalmi D
Nucleic Acids Res (2025) 53 [ Pubmed: 41312769 DOI: doi:10.1093/nar/gkaf1139 ]
Resolution: 4.3 Å
EM Method: Single-particle
Fitted PDBs: 9clm
Q-score: 0.265
Dubey S, Noinaj N
To Be Published
Resolution: 3.71 Å
EM Method: Single-particle
Fitted PDBs: 9cmg
Q-score: 0.413
Dubey S, Noinaj N
To Be Published
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 9dc4
Q-score: 0.519
Dubey S, Noinaj N
To Be Published
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 9dhx
Q-score: 0.555
Sarkar S, Gebert LFR, MacRae IJ
To Be Published
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 9mi8
Q-score: 0.314
Sverzhinsky A, Xue H, Langelier MF, Muniz Correa MV, Del Mundo J, Classen S, Hammel M, Rothenberg E, Pascal JM
Nat Commun (2026) [ Pubmed: 41698892 DOI: doi:10.1038/s41467-026-69375-3 ]
Resolution: 3.51 Å
EM Method: Single-particle
Fitted PDBs: 9na1
Q-score: 0.354
Jones CP, Ferre-D'Amare AR
To Be Published
Resolution: 3.56 Å
EM Method: Single-particle
Fitted PDBs: 9na7
Q-score: 0.338
Jones CP, Ferre-D'Amare AR
To Be Published
Resolution: 3.67 Å
EM Method: Single-particle
Fitted PDBs: 9nak
Q-score: 0.324
Jones CP, Ferre-D'Amare AR
To Be Published
Resolution: 2.87 Å
EM Method: Single-particle
Fitted PDBs: 9nam
Q-score: 0.411
Jones CP, Ferre-D'Amare AR
To Be Published
Filter By
Current Database
- EMDB [54485]
Current status
- REL [54485]
Sample type
- Complex [43789]
- Protein [36476]
- Ligand [20179]
- RNA [4763]
- Virus [3777]
- Sample [3679]
- DNA [3396]
- Cellular component [3217]
- Cell [1721]
- Tissue [290]
- Other [247]
- Em label [3]
Organism
- Homo sapiens [19421]
- Synthetic construct [3819]
- Mus musculus [3563]
- Escherichia coli [3025]
- Saccharomyces cerevisiae [2552]
- Severe acute respiratory syndrome coronavirus [2504]
- Rattus norvegicus [1218]
- Bos taurus [1160]
- Escherichia coli [1109]
- Human immunodeficiency virus 1 [1046]
- Oryctolagus cuniculus [955]
- Sus scrofa [903]
- Xenopus laevis [845]
- Saccharomyces cerevisiae [784]
- Lama glama [580]
- Arabidopsis thaliana [518]
- Chlamydomonas reinhardtii [413]
- Macaca mulatta [405]
- Drosophila melanogaster [335]
- Mycolicibacterium smegmatis [324]
- Influenza a virus [298]
- Bacillus subtilis [267]
- Mycobacterium tuberculosis [258]
- Gallus gallus [248]
- Tetrahymena thermophila [216]
- Escherichia coli [182]
- Caenorhabditis elegans [178]
- Pseudomonas aeruginosa [177]
- Staphylococcus aureus [175]
- Vicugna pacos [174]
- Enterobacteria phage m13 [166]
- Thermus thermophilus [164]
- Chaetomium thermophilum [163]
- Danio rerio [163]
- Mycobacterium tuberculosis [144]
- Saccharomyces cerevisiae [136]
- Leishmania tarentolae [136]
- Enterobacteria phage t4 [135]
- Salmonella enterica [128]
- Bacillus subtilis [126]
- Ovis aries [126]
- Chaetomium thermophilum [123]
- (no species) [122]
- Escherichia virus t7 [117]
- Schizosaccharomyces pombe [117]
- Synechocystis sp. pcc 6803 [116]
- Plasmodium falciparum [115]
- Bacillus sp. (strain ps3) [113]
- Plasmodium falciparum [110]
- Vibrio cholerae [105]
- Mycolicibacterium smegmatis [103]
- Streptococcus pyogenes [98]
- Pseudomonas aeruginosa [95]
- Severe acute respiratory syndrome coronavirus [95]
- Trypanosoma brucei [91]
- Spinacia oleracea [89]
- Mycoplasma pneumoniae [88]
- Aequorea victoria [87]
- Hepatitis b virus [86]
- African swine fever virus [86]
- Escherichia coli [78]
- Cricetulus griseus [77]
- Sus scrofa [76]
- Monkeypox virus [74]
- Human immunodeficiency virus [72]
- Human cytomegalovirus [70]
- Thermus thermophilus [70]
- Human herpesvirus 1 [69]
- Zaire ebolavirus [69]
- Thermoplasma acidophilum [69]
- Middle east respiratory syndrome-related coronavirus [68]
- Legionella pneumophila [68]
- Clostridioides difficile [67]
- Chikungunya virus [67]
- Macaca fascicularis [67]
- Schizosaccharomyces pombe [65]
- Canis lupus [64]
- Saccharomyces cerevisiae [63]
- Pseudomonas phage phi6 [62]
- Salmonella enterica [62]
- (no species) [61]
- Nostoc sp. (strain pcc 7120 / sag 25.82 / utex 2576) [61]
- Eastern equine encephalitis virus [61]
- Klebsiella pneumoniae [61]
- Enterobacteria phage t4 [60]
- Adeno-associated virus [60]
- Polytomella sp. pringsheim 198.80 [59]
- Lassa mammarenavirus [57]
- Neurospora crassa [56]
- Trypanosoma brucei [56]
- Escherichia phage lambda [55]
- Dna molecule [55]
- Dictyostelium discoideum [55]
- Enterovirus d [55]
- Amanita phalloides [55]
- Equus caballus [55]
- Zika virus [53]
- Epstein-barr virus (strain gd1) [52]
- Clostridium botulinum [52]
- Porphyridium purpureum [52]
EM Method
- Single-particle [46362]
- Subtomogram averaging [2943]
- Tomography [2586]
- Helical reconstruction [2404]
- Electron Crystallography [190]
Resolution
- < 2Å [413]
- ≥ 2Å and < 3Å [11023]
- ≥ 3Å and < 4Å [22384]
- ≥ 4Å and < 5Å [5436]
- ≥ 5Å and < 6Å [1290]
- ≥ 6Å and < 8Å [2709]
- ≥ 8Å and < 12Å [2360]
- ≥ 12Å and < 16Å [1324]
- ≥ 16Å and < 20Å [1065]
- ≥ 20Å and < 30Å [2825]
- ≥ 30Å [1960]
Model molecular weight
- 0-50 kDa [24]
- 50-100 kDa [89]
- 100-250 kDa [372]
- 250-500 kDa [309]
- 500-1000 kDa [177]
- 1-2 MDa [86]
- 2-5 MDa [81]
- 5-10 MDa [15]
- > 10 MDa [14]
Release Date
- 2026 [1991]
- 2025 [11630]
- 2024 [9268]
- 2023 [7724]
- 2022 [6105]
- 2021 [4461]
- 2020 [3798]
- 2019 [2416]
- 2018 [1748]
- 2017 [1090]
- 2016 [1039]
- 2015 [633]
- 2014 [593]
- 2013 [513]
- 2012 [394]
- 2011 [248]
- 2010 [209]
- 2009 [207]
- 2008 [54]
- 2007 [129]
- 2006 [120]
- 2005 [38]
- 2004 [33]
- 2003 [39]
- 2002 [5]
Author by name
- Liu J [1931]
- Zhang Y [1729]
- Ward AB [1680]
- Wang Y [1628]
- Zhang X [1593]
- Wang X [1360]
- Ren G [1236]
- Liu Y [1174]
- Li Y [1168]
- Wang J [1115]
- Zhang M [1115]
- Zhang Z [1096]
- Li X [1029]
- Li S [992]
- Li Z [980]
- Zhang L [922]
- Li J [915]
- Zhang J [888]
- Chen Y [845]
- Wang L [818]
- Wang S [789]
- Gao Y [781]
- Wang H [772]
- Li H [701]
- Liu S [688]
- Zhang S [680]
- Zhou ZH [671]
- Chen Z [652]
- Chen X [650]
- Wang C [642]
- Shi Y [628]
- Liu H [616]
- Liu X [614]
- Liu Z [602]
- Liu C [601]
- Zhang K [592]
- Wu H [584]
- Xu Y [580]
- Zhu Y [578]
- Wang Q [575]
- Li D [574]
- Yang Y [568]
- Liu L [567]
- Zhang H [567]
- Wang Z [554]
- Beckmann R [553]
- Jiang Y [545]
- Chen J [536]
- Zhao Y [535]
- Cottrell CA [505]
- Xu J [498]
- Han J [497]
- Li W [490]
- Burton DR [486]
- Yang X [481]
- Huang Y [478]
- Cheng J [472]
- Chiu W [469]
- Zhou L [453]
- Yu X [449]
- Ozorowski G [447]
- Wilson IA [445]
- Xu C [444]
- Hu Z [438]
- Zhang C [434]
- Zhang R [419]
- Zhang P [407]
- Chen L [404]
- Sewall LM [402]
- Torres JL [401]
- Sanders RW [399]
- Wang F [399]
- Wang P [398]
- Zhang W [398]
- Wu C [395]
- Zhu X [395]
- Sun Y [394]
- Zhao J [393]
- Wu J [391]
- Zhou Q [388]
- Cheng Y [385]
- Berninghausen O [384]
- Zhang Q [384]
- Zhao X [382]
- Zhou Y [380]
- Wang M [377]
- Kotecha A [376]
- Liu JF [374]
- Li L [373]
- Yang F [371]
- Cramer P [370]
- Brown A [369]
- Lu Y [365]
- Rubinstein JL [364]
- Wu Y [364]
- Li M [363]
- Zhou J [363]
- Yu Z [362]
- Zhang B [360]
- Kwong PD [358]
Author by ORCID
- Skiniotis G [12]
- Xu HE [11]
- Ward AB [10]
- Li H [10]
- Gao GF [10]
- Gao N [10]
- Kotecha A [9]
- Chiu W [9]
- Rubinstein JL [9]
- Kobilka BK [8]
- Zhang K [8]
- Chai P [8]
- Kwong PD [8]
- He X [7]
- Scheres SHW [7]
- Liu B [7]
- Qi J [7]
- Plevka P [7]
- Blaza JN [6]
- Kurumizaka H [6]
- Robinson CV [6]
- Sexton PM [6]
- Raunser S [6]
- Cheng Y [6]
- Kuhlbrandt W [6]
- Cottrell CA [6]
- Ranson NA [6]
- Gmeiner P [6]
- Ramakrishnan V [6]
- Goedert M [6]
- Shirouzu M [6]
- Xu F [6]
- Zhang P [6]
- Papasergi-scott MM [6]
- Sun JP [6]
- Wilson DN [6]
- Beckmann R [6]
- Wootten D [6]
- Egelman EH [6]
- Hilger D [5]
- Frank J [5]
- Czarnocki-cieciura M [5]
- Baker D [5]
- Xu Y [5]
- Mclaughlin SH [5]
- Wang Y [5]
- Skowronek K [5]
- Kollman JM [5]
- Batebi H [5]
- Crispin M [5]
- Stahlberg H [5]
- Fuzik T [5]
- Schoehn G [5]
- Li M [5]
- Belousoff MJ [5]
- Sun M [5]
- Panova O [5]
- Amunts A [5]
- Yamashita K [5]
- Veesler D [5]
- He F [5]
- Gao Y [5]
- Li D [5]
- Perez-hernandez G [5]
- Hildebrand PW [5]
- Wang F [5]
- Subramaniam S [5]
- Sui SF [4]
- Zhang L [4]
- Schneider C [4]
- Yu EW [4]
- Gu J [4]
- Ke A [4]
- Zheng W [4]
- Danev R [4]
- Brohawn SG [4]
- Ekemezie CL [4]
- Guo H [4]
- Hill CH [4]
- Southworth DR [4]
- Becker T [4]
- Li N [4]
- Noble AJ [4]
- Einsle O [4]
- Sun L [4]
- Deganutti G [4]
- Barford D [4]
- Tian C [4]
- Greber BJ [4]
- Brown A [4]
- Zhang X [4]
- Li X [4]
- Chang YC [4]
- Gao Y [4]
- Rybak MY [4]
- Roth BL [4]
- Jiang Y [4]
- Brown CR [4]
- Sachse C [4]
- Campbell EA [4]
Journal
- NAT COMMUN [9886]
- TO BE PUBLISHED [5522]
- NATURE [4673]
- PNAS [3196]
- NAT STRUCT MOL BIOL [3010]
- SCIENCE [2729]
- BIORXIV [2345]
- CELL [2304]
- MOL CELL [1738]
- SCI ADV [1717]
- ELIFE [1690]
- STRUCTURE [1432]
- CELL REP [1259]
- NUCLEIC ACIDS RES [1027]
- EMBO J [717]
- J MOL BIOL [662]
- CELL RES [660]
- COMMUN BIOL [657]
- J VIROL [630]
- J BIOL CHEM [530]
- PLOS PATHOG [503]
- NAT MICROBIOL [474]
- CELL DISCOV [449]
- NAT CHEM BIOL [435]
- ACTA CRYSTALLOGR D STRUCT BIOL [349]
- SCI REP [326]
- J STRUCT BIOL [317]
- NAT METHODS [308]
- MBIO [271]
- NAT PLANTS [229]
- IMMUNITY [214]
- EMBO REP [207]
- PLOS BIOL [206]
- CELL HOST MICROBE [193]
- J CELL BIOL [180]
- J AM CHEM SOC [173]
- PROTEIN SCI [162]
- PROTEIN CELL [157]
- SCI TRANSL MED [129]
- VIRUSES [127]
- NEURON [121]
- NPJ VACCINES [119]
- PLOS ONE [112]
- IUCRJ [102]
- ISCIENCE [98]
- LIFE SCI ALLIANCE [97]
- INT J MOL SCI [93]
- DEV CELL [85]
- PNAS NEXUS [84]
- BIOCHEMISTRY [79]
- J STRUCT BIOL X [78]
- J MED CHEM [76]
- CURR BIOL [75]
- SCI IMMUNOL [71]
- ACS NANO [70]
- COMMUN CHEM [70]
- MOL BIOL CELL [64]
- SIGNAL TRANSDUCT TARGET THER [63]
- RES SQ [61]
- ADV SCI [60]
- ACTA NEUROPATHOL [57]
- J CLIN INV [55]
- FRONT ENDOCRINOL [53]
- ANGEW CHEM INT ED ENGL [52]
- BLOOD [52]
- NAT NANOTECHNOL [50]
- FEBS J [49]
- INT J BIOL MACROMOL [49]
- RNA [49]
- BIOCHEM BIOPHYS RES COMMUN [48]
- BIOMOLECULES [48]
- VIROLOGY [46]
- FRONT MOL BIOSCI [45]
- FEBS LETT [44]
- NAT CATAL [43]
- MOL PLANT [41]
- NAT CELL BIOL [40]
- EBIOMEDICINE [38]
- GENES DEV [37]
- MOL MICROBIOL [37]
- NAT CHEM [37]
- ACS CENT SCI [36]
- CELL REP METHODS [36]
- EMERG MICROBES INFECT [35]
- ISME J [35]
- J BACTERIOL [34]
- PLANT COMMUN. [33]
- J CELL SCI [32]
- BIOCHIM BIOPHYS ACTA MOL CELL BIOL LIPIDS [31]
- NAT IMMUNOL [30]
- BIOCHEM J [29]
- FRONT IMMUNOL [29]
- J EXP MED [27]
- J GEN VIROL [27]
- NATL SCI REV [27]
- PLANT CELL [27]
- ACS CHEM BIOL [25]
- CELL REP MED [25]
- FRONT MICROBIOL [25]
- OPEN BIOL [25]
Software
- RELION [13758]
- CRYOSPARC [12941]
- CTFFIND [2342]
- GCTF [1522]
- IMOD [1114]
- SPIDER [785]
- TOMOCTF [533]
- CHIMERA [489]
- WARP [486]
- CISTEM [465]
- IPET [445]
- FREALIGN [437]
- EMAN2 [368]
- EMAN [348]
- DYNAMO [313]
- COOT [283]
- PEET [214]
- PHENIX [211]
- XMIPP [157]
- IMAGIC [144]
- JSPR [141]
- CRYOLO [134]
- PYTOM [134]
- UCSF CHIMERA [124]
- SPHIRE [115]
- MATLAB [110]
- UCSF CHIMERAX [102]
- AUTO3DEM [93]
- ETOMO [86]
- AV3 [83]
- NOVACTF [79]
- EMCLARITY [72]
- TOMO3D [66]
- CTFPHASEFLIP [65]
- SPARX [65]
- CTFFIND3 [62]
- TOM TOOLBOX [62]
- EMAN2, SPARX [61]
- NOVASTA [61]
- STOPGAP [56]
- SITUS [53]
- TOM [48]
- AIMLESS [46]
- MDFF [46]
- MRC [43]
- BSOFT [42]
- IMAGIC, SPIDER [42]
- SPIDER, APPION [39]
- URO [38]
- SPIDER, FREALIGN [37]
- PROTOMO [36]
- SIMPLE [36]
- EMFIT [33]
- APPION, SPIDER [32]
- CTFFIND3, RELION [31]
- IHRSR [31]
- APPION [30]
- SPRING [30]
- SCIPION [29]
- EM3DR2 [28]
- EMAN1 [27]
- CHIMERA, SITUS [26]
- MPSA [26]
- IMIRS [25]
- ISOLDE [25]
- CTFFIND4 [24]
- IMOD, PEET [24]
- EMAN2, RELION [22]
- J3DR [22]
- O [22]
- I3 [21]
- M [21]
- MOTIONCORR2 [21]
- SUBTOM [21]
- CTFTILT [20]
- FREALIX [20]
- IMOD, BSOFT, SPIDER, TOM, PACKAGE, MATLAB [20]
- IMOD, TOMO3D [20]
- JALIGN [20]
- CHIMERA, MDFF [19]
- EMAN1, EMAN2 [18]
- IMOD, TOMO3D, PEET [18]
- SERIALEM [18]
- SPIDER, RELION [18]
- TOMOALIGN [18]
- APPION, SPIDER, SPARX, EMAN2 [17]
- CHIMERA, COOT [17]
- MOLREP [17]
- SPIDER, IMAGIC [17]
- CRYODRGN [16]
- IMAGIC, CUSTOM, SPIDER [16]
- MULTI-PATH SA [16]
- POINTLESS [16]
- UNBLUR, CTFFIND4, FREALIGN [16]
- APPION, SPIDER, EMAN [15]
- COMET [15]
- EMAN, SPIDER [15]
- IMAGIC-5 [15]
- IMOD, DYNAMO [15]
- RELION, CTFFIND3 [15]
Microscope
- FEI TITAN KRIOS [30706]
- TFS KRIOS [10505]
- FEI TALOS ARCTICA [2711]
- TFS GLACIOS [1601]
- FEI TECNAI F20 [1544]
- FEI POLARA 300 [1219]
- FEI TECNAI SPIRIT [756]
- FEI TECNAI F30 [664]
- FEI TITAN [629]
- JEOL CRYO ARM 300 [610]
- ZEISS LIBRA120PLUS [478]
- FEI TECNAI ARCTICA [395]
- FEI TECNAI 20 [309]
- FEI TECNAI 12 [270]
- FEI/PHILIPS CM200FEG [244]
- TFS TALOS [204]
- JEOL 3200FSC [203]
- JEOL 2200FS [176]
- FEI/PHILIPS CM300FEG/T [117]
- JEOL 2010F [114]
- JEOL 2100F [97]
- JEOL CRYO ARM 200 [87]
- TFS TALOS L120C [75]
- TFS TALOS F200C [66]
- JEOL 2100 [64]
- JEOL 3200FS [50]
- FEI/PHILIPS EM420 [47]
- JEOL 1230 [43]
- JEOL 3100FFC [42]
- TFS TITAN THEMIS [39]
- FEI/PHILIPS CM120T [38]
- OTHER [33]
- JEOL 1400 [31]
- FEI MORGAGNI [28]
- JEOL 3000SFF [27]
- JEOL KYOTO-3000SFF [24]
- JEOL 4000EX [23]
- FEI/PHILIPS CM200FEG/ST [22]
- FEI/PHILIPS CM200T [21]
- JEOL 1200EXII [21]
- JEOL 2200FSC [19]
- TFS TUNDRA [19]
- JEOL 4000 [17]
- FEI TECNAI 10 [15]
- JEOL 1200EX [15]
- FEI/PHILIPS CM300FEG/HE [14]
- JEOL 1400/HR YPS FEG [11]
- FEI/PHILIPS CM200FEG/UT [10]
- FEI/PHILIPS CM12 [8]
- JEOL 2010 [8]
- FEI TECNAI SPHERA [6]
- FEI/PHILIPS CM300FEG/ST [6]
- JEOL 100CX [6]
- JEOL 2000EX [6]
- JEOL 3100FEF [6]
- FEI/PHILIPS CM10 [4]
- JEOL 1010 [4]
- HITACHI EF2000 [3]
- HITACHI H-9500SD [3]
- JEOL 1000EES [3]
- JEOL 1200 [3]
- FEI/PHILIPS EM400 [2]
- JEOL 2010HC [2]
- JEOL 2010HT [2]
- JEOL 2010UHR [2]
- FEI/PHILIPS CM200FEG/SOPHIE [1]
- HITACHI H7600 [1]
- JEOL 2000EXII [1]
- JEOL 2011 [1]
- SHUIMU TOTEM 300S [1]
- ZEISS LEO912 [1]
Electron Source
- FIELD EMISSION GUN [52151]
- LAB6 [1834]
- OTHER [298]
- TUNGSTEN HAIRPIN [203]
Film or detector model
- GATAN K3 6K X 4K [13678]
- GATAN K3 BIOQUANTUM 6K X 4K [10765]
- GATAN K2 SUMMIT 4K X 4K [10718]
- FEI FALCON IV 4K X 4K [4815]
- FEI FALCON III 4K X 4K [3007]
- GATAN K2 QUANTUM 4K X 4K [2192]
- FEI FALCON II 4K X 4K [1490]
- GATAN ULTRASCAN 4000 4K X 4K [1242]
- TFS FALCON 4I 4K X 4K [995]
- KODAK SO-163 FILM [980]
- TVIPS TEMCAM-F416 4K X 4K [881]
- GATAN K3 BIOCONTINUUM 6K X 4K [529]
- FEI EAGLE 4K X 4K [492]
- OTHER [386]
- FEI CETA 4K X 4K [339]
- GATAN K2 4K X 4K [228]
- GATAN K2 BASE 4K X 4K [211]
- TVIPS TEMCAM-F415 4K X 4K [168]
- DIRECT ELECTRON DE-20 5K X 3K [144]
- GENERIC GATAN 4K X 4K [109]
- GENERIC CCD [108]
- GATAN ULTRASCAN 1000 2K X 2K [106]
- FEI FALCON I 4K X 4K [80]
- GENERIC TVIPS 4K X 4K [77]
- FEI EAGLE 2K X 2K [59]
- TVIPS TEMCAM-F816 8K X 8K [52]
- DIRECT ELECTRON DE-64 8K X 8K [48]
- GATAN MULTISCAN [48]
- GENERIC GATAN [44]
- DIRECT ELECTRON DE-16 4K X 4K [40]
- GATAN K2 IS 4K X 4K [40]
- TVIPS TEMCAM-F224 2K X 2K [36]
- DIRECT ELECTRON APOLLO 4K X 4K [30]
- DIRECT ELECTRON DE-12 4K X 3K [30]
- DIRECT ELECTRON DE-10 5K X 4K [22]
- TVIPS TEMCAM-F216 2K X 2K [18]
- GENERIC GATAN 2K X 2K [16]
- AGFA SCIENTA FILM [12]
- DECTRIS SINGLA 1K X 1K [12]
- KODAK 4489 FILM [12]
- GATAN ORIUS SC200 2K X 2K [11]
- GENERIC CCD 2K X 2K [11]
- GENERIC FILM [11]
- GENERIC TVIPS [11]
- GATAN ORIUS SC1000 4K X 2.7K [7]
- DECTRIS ELA 1K X 0.5K [6]
- GATAN ULTRASCAN 10000 10K X 10K [6]
- GATAN ALPINE 2.3K X 3.2K [5]
- SIA 15C 3K X 3K [4]
- GENERIC IMAGE PLATES [3]
- GENERIC TVIPS 2K X 2K [3]
- GATAN ORIUS SC600 2.7K X 2.7K [2]
- DECTRIS ARINA 0.2K X 0.2K [1]
- PROSCAN TEM-PIV 2K X 2K [1]
External links
- PDB [1174]
- UniProt [1104]
- PDBe-Kb [1006]
- AlphaFold DB [945]
- InterPro [920]
- Gene Ontology [856]
- Pfam [835]
- ChEBI [652]
- ChEMBL [600]
- DrugBank [538]
- Complex Portal [307]
- EMPIAR [107]
- SCOP2 [27]
- CATH [12]
