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Filter By

Current Database

  • EMDB [188]

Current status

  • REL [188]

Sample type

  • Complex [86]
  • Cellular component [65]
  • Sample [52]
  • Protein [41]
  • Cell [15]
  • Virus [6]
  • Ligand [2]
  • RNA [1]

Organism

  • Homo sapiens [83]
  • Chlamydomonas reinhardtii [25]
  • Plasmodium falciparum [10]
  • Tetrahymena thermophila [8]
  • Sus scrofa [8]
  • Mus musculus [7]
  • Nostoc sp. (strain pcc 7120 / sag 25.82 / utex 2576) [6]
  • Escherichia coli [5]
  • Strongylocentrotus purpuratus [5]
  • Xenopus laevis [5]
  • Bos taurus [5]
  • Paramecium tetraurelia [4]
  • Murine leukemia virus [3]
  • Pseudoalteromonas luteoviolacea [3]
  • Saccharomyces cerevisiae [3]
  • Influenza a virus [3]
  • Vibrio cholerae [3]
  • Human mastadenovirus c [2]
  • Human herpesvirus 3 [1]
  • Hepatitis b virus [1]
  • Rabies lyssavirus [1]
  • Chroomonas placoidea [1]
  • Methanosarcina mazei [1]
  • Shewanella oneidensis [1]
  • Escherichia coli [1]
  • Candidatus methylomirabilis lanthanidiphila [1]
  • Pyrococcus furiosus [1]
  • Myxococcus xanthus [1]
  • Thermus thermophilus [1]
  • Severe acute respiratory syndrome coronavirus [1]
  • Tetrahymena thermophila [1]
  • Saccharomyces cerevisiae [1]
  • Aequorea victoria [1]
  • Trichonympha sp. [1]
  • Limulus polyphemus [1]
  • Spodoptera frugiperda [1]
  • Danio rerio [1]

EM Method

  • Subtomogram averaging [104]
  • Tomography [72]
  • Single-particle [8]
  • Helical reconstruction [4]

Resolution

  • ≥ 2Å and < 3Å [2]
  • ≥ 3Å and < 4Å [1]
  • ≥ 4Å and < 5Å [1]
  • ≥ 5Å and < 6Å [1]
  • ≥ 8Å and < 12Å [4]
  • ≥ 12Å and < 16Å [58]
  • ≥ 20Å and < 30Å [35]
  • ≥ 30Å [77]

Model molecular weight

  • 50-100 kDa [1]

Release Date

  • 2025 [10]
  • 2024 [7]
  • 2023 [3]
  • 2022 [18]
  • 2021 [9]
  • 2020 [59]
  • 2019 [11]
  • 2018 [12]
  • 2017 [6]
  • 2016 [20]
  • 2015 [1]
  • 2014 [16]
  • 2013 [11]
  • 2012 [3]
  • 2009 [1]
  • 2007 [1]

Author by name

  • Akhouri RR [67]
  • Skoglund U [67]
  • Ofverstedt LG [52]
  • Purba ER [52]
  • Wilken G [52]
  • Maruyama IN [51]
  • Saita EI [51]
  • Nicastro D [23]
  • Furusho H [15]
  • Goel S [15]
  • Wahlgren M [15]
  • Steinmetz MO [14]
  • Bousquet C [13]
  • Chretien D [13]
  • Duchesne L [13]
  • Gaillard N [13]
  • Gibeaux R [13]
  • Guilloux G [13]
  • Guyomar C [13]
  • Heichette C [13]
  • Heumann JM [13]
  • Kikkawa M [13]
  • Ku S [13]
  • Oda T [13]
  • Jensen GJ [12]
  • Lin J [12]
  • Pilhofer M [10]
  • Yagi T [10]
  • Yanagisawa H [10]
  • Weiss GL [9]
  • Zhao Y [9]
  • Fu G [8]
  • Gui L [8]
  • Joachimiak E [8]
  • Klena N [8]
  • Phan N [8]
  • Wloga D [8]
  • Pigino G [7]
  • Song K [7]
  • Briegel A [6]
  • Forchhammer K [6]
  • Kieninger A [6]
  • Kieninger AK [6]
  • Maldener I [6]
  • Oikonomou CM [6]
  • Andrieux A [5]
  • Arnal I [5]
  • Bosc C [5]
  • Chang YW [5]
  • De Andrade M [5]
  • Delaroche J [5]
  • Denarier E [5]
  • Effantin G [5]
  • Gopal D [5]
  • Gory-faure S [5]
  • Guichard P [5]
  • Sadian Y [5]
  • Serre L [5]
  • Stahlberg H [5]
  • Urbanska P [5]
  • Wang Q [5]
  • Wu J [5]
  • Aeschlimann G [4]
  • Alvarez Viar G [4]
  • Ames P [4]
  • Baroud C [4]
  • Baroud CN [4]
  • Bayless B [4]
  • Bayless BA [4]
  • Bolognini D [4]
  • Capasso P [4]
  • Chang Y-W [4]
  • Dave D [4]
  • Dupuis-williams P [4]
  • Engel BD [4]
  • Erdmann PS [4]
  • Gaertig J [4]
  • Geimer S [4]
  • Goldie KN [4]
  • Grunewald K [4]
  • Gumbart JC [4]
  • Hamel V [4]
  • Kjaer A [4]
  • Kovacik L [4]
  • Le Guennec M [4]
  • Louka P [4]
  • Martino F [4]
  • Nievergelt AP [4]
  • Ortega DR [4]
  • Parkinson JS [4]
  • Riedel C [4]
  • Schaffer M [4]
  • Stoddard D [4]
  • Surwayanshi S [4]
  • Suryawanshi S [4]
  • Tassin AM [4]
  • Tomasi R [4]
  • Tomasi RF [4]
  • Vasishtan D [4]
  • Winey M [4]

Author by ORCID

  • Xu B [1]
  • Berciu C [1]
  • Oh Y [1]

Journal

  • FRONT ENDOCRINOL [51]
  • ELIFE [18]
  • BIORXIV [16]
  • CELL REP [16]
  • MOL BIOL CELL [12]
  • J CELL BIOL [10]
  • NAT COMMUN [10]
  • SCIENCE [8]
  • CELL [7]
  • EMBO J [6]
  • CURR BIOL [5]
  • J STRUCT BIOL [5]
  • PNAS [5]
  • J VIROL [4]
  • MOL MICROBIOL [4]
  • NAT STRUCT MOL BIOL [4]
  • FASEB J [3]
  • PLOS GENET [3]
  • EMBO REP [2]
  • NAT CELL BIOL [2]
  • NAT MICROBIOL [2]
  • TO BE PUBLISHED [2]
  • CELL DISCOV [1]
  • CELL REP PHYS SCI [1]
  • FRONT MICROBIOL [1]
  • J MOL BIOL [1]
  • MOL CELL [1]
  • PLOS PATHOG [1]
  • SCI REP [1]

Software

  • PEET [39]
  • IMOD [23]
  • COMET [15]
  • PEET, RUBY-HELIX [12]
  • MATLAB [9]
  • CHIMERA [6]
  • EMAN2 [6]
  • EMAN [4]
  • IMOD, TOMO3D [4]
  • TOMO3D [4]
  • ETOMO [3]
  • FREALIGN [2]
  • IMOD, PEET [2]
  • MOTIONCORR, IMOD, TOMOCTF, PEET, BSOFT [2]
  • AUTO3DEM [1]
  • CISTEM [1]
  • CRYOSPARC [1]
  • CTFFIND3 [1]
  • DYNAMO [1]
  • IHRSH [1]
  • IMOD, ETOMO, , PEET , SPIDER [1]
  • IMOD, PEET, TOMOCTF [1]
  • MOTIONCORR, IMOD, TOMOCTF, PEET [1]
  • MRC IMAGE PROCESSING PACKAGE [1]
  • PRIISM [1]
  • SPIDER [1]
  • SPIDER, EMAN [1]
  • UCSF CHIMERA [1]
  • WARP [1]

Microscope

  • FEI TITAN KRIOS [89]
  • FEI POLARA 300 [24]
  • FEI TECNAI F30 [23]
  • FEI TECNAI 20 [14]
  • JEOL 3100FFC [12]
  • TFS KRIOS [10]
  • FEI TITAN [7]
  • FEI TECNAI F20 [2]
  • TFS GLACIOS [2]
  • JEOL 1200EX [1]
  • JEOL 2100F [1]
  • JEOL 3100FEF [1]
  • JEOL 3200FS [1]
  • JEOL 3200FSC [1]

Electron Source

  • FIELD EMISSION GUN [173]
  • LAB6 [15]

Film or detector model

  • FEI FALCON II 4K X 4K [68]
  • GATAN K2 SUMMIT 4K X 4K [21]
  • TVIPS TEMCAM-F416 4K X 4K [21]
  • GATAN ULTRASCAN 1000 2K X 2K [20]
  • GATAN K3 6K X 4K [11]
  • GATAN ULTRASCAN 4000 4K X 4K [10]
  • GATAN K2 QUANTUM 4K X 4K [9]
  • GATAN K3 BIOQUANTUM 6K X 4K [5]
  • GATAN K2 4K X 4K [4]
  • GATAN MULTISCAN [3]
  • GENERIC CCD [3]
  • FEI FALCON III 4K X 4K [2]
  • GENERIC GATAN 2K X 2K [2]
  • KODAK SO-163 FILM [2]
  • FEI EAGLE 4K X 4K [1]
  • FEI FALCON IV 4K X 4K [1]
  • TVIPS TEMCAM-F816 8K X 8K [1]

External links

  • PDB [1]
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Showing 1 - 10 of 188. Page 1 of 19
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EMD-53361
Download Map
3D View
Structure of the energy converting methyltransferase Mtr of Methanosarcina mazei in complex with a novel protein binder
Composite map
CryoEM
Release date: Dec. 24, 2025
Resolution: 2.1 Å
EM Method: Single-particle
Fitted PDBs: 9qts
Q-score: 0.619

Reif-Trauttmansdorff T, Herdering E, Bohn S, Pascoa T, Kahnt J, Zimmer E, Kumar A, Schmitz RA, Schuller JM

Nat Commun (2025) 17 pp. 133-133 [ Pubmed: 41436738 DOI: doi:10.1038/s41467-025-67705-5 ]

EMD-51790
Download Map
3D View
Subtomogram average of intracellular influenza A virus hemagglutinin subtype H1
CryoEM
Release date: Oct. 29, 2025
Resolution: 30.0 Å
EM Method: Subtomogram averaging

Wachsmuth-Melm M, Chlanda P, Peterl S, Makroczyova J, Vale-Costa S, Amorim MJ

To Be Published

EMD-46484
Download Map
3D View
Cryo-electron tomography and subtomogram averaging of WT mouse respiratory ciliary axoneme
CryoEM
Release date: Aug. 13, 2025
Resolution: 36.0 Å
EM Method: Subtomogram averaging

Zhao Y, Song K, Tavakoli A, Gui L, Fernandez-Gonzalez A, Zhang S, Dzeja PP, Mitsialis SA, Zhang X, Nicastro D

Nat Struct Mol Biol (2025) 32 pp. 1542-1554 [ Pubmed: 40579595 DOI: doi:10.1038/s41594-025-01594-6 ]

EMD-46485
Download Map
3D View
Cryo-electron tomography and subtomogram averaging of AK1-/- mouse respiratory ciliary axoneme
CryoEM
Release date: Aug. 13, 2025
Resolution: 44.0 Å
EM Method: Subtomogram averaging

Zhao Y, Song K, Tavakoli A, Gui L, Fernandez-Gonzalez A, Zhang S, Dzeja PP, Mitsialis SA, Zhang X, Nicastro D

Nat Struct Mol Biol (2025) 32 pp. 1542-1554 [ Pubmed: 40579595 DOI: doi:10.1038/s41594-025-01594-6 ]

EMD-46486
Download Map
3D View
Cryo-electron tomography and subtomogram averaging of AK7-/- mouse respiratory ciliary axoneme
CryoEM
Release date: Aug. 13, 2025
Resolution: 38.0 Å
EM Method: Subtomogram averaging

Zhao Y, Song K, Tavakoli A, Gui L, Fernandez-Gonzalez A, Zhang S, Dzeja PP, Mitsialis SA, Zhang X, Nicastro D

Nat Struct Mol Biol (2025) 32 pp. 1542-1554 [ Pubmed: 40579595 DOI: doi:10.1038/s41594-025-01594-6 ]

EMD-52569
Download Map
3D View
MAP6d1 assembles protofilaments in the microtubule lumen
CryoEM
Consensus map
Release date: July 9, 2025
Resolution: 12.5 Å
EM Method: Subtomogram averaging

Gopal D, Wu J, Delaroche J, Bosc C, De Andrade M, Denarier E, Effantin G, Andrieux A, Gory-Faure S, Serre L, Arnal I

Nat Commun (2025) 16 pp. 6210-6210 [ DOI: doi:10.1038/s41467-025-61679-0 Pubmed: 40617876 ]

EMD-52572
Download Map
3D View
MAP6d1 assembles protofilaments in the lumen of microtubule doublets
CryoEM
Release date: July 9, 2025
Resolution: 33.0 Å
EM Method: Subtomogram averaging

Gopal D, Wu J, Delaroche J, Bosc C, De Andrade M, Denarier E, Effantin G, Andrieux A, Gory-Faure S, Serre L, Arnal I

Nat Commun (2025) 16 pp. 6210-6210 [ DOI: doi:10.1038/s41467-025-61679-0 Pubmed: 40617876 ]

EMD-52574
Download Map
3D View
MAP6d1 assembles microtubule doublets
Focused map
CryoEM
Release date: July 9, 2025
Resolution: 22.0 Å
EM Method: Subtomogram averaging

Gopal D, Wu J, Delaroche J, Bosc C, De Andrade M, Denarier E, Effantin G, Andrieux A, Gory-Faure S, Serre L, Arnal I

Nat Commun (2025) 16 pp. 6210-6210 [ DOI: doi:10.1038/s41467-025-61679-0 Pubmed: 40617876 ]

EMD-53452
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3D View
luminal protofilaments after masked refinement in a singlet microtubule
CryoEM
Focused map
Release date: July 9, 2025
Resolution: 21.0 Å
EM Method: Subtomogram averaging

Gopal D, Wu J, Delaroche J, Bosc C, De Andrade M, Denarier E, Effantin G, Andrieux A, Gory-Faure S, Serre L, Arnal I

Nat Commun (2025) 16 pp. 6210-6210 [ DOI: doi:10.1038/s41467-025-61679-0 Pubmed: 40617876 ]

EMD-53457
Download Map
3D View
Combined map of singlet microtubule with 2 luminal protofilament
Composite map
CryoEM
Release date: July 9, 2025
Resolution: 12.5 Å
EM Method: Subtomogram averaging

Gopal D, Wu J, Delaroche J, Bosc C, De Andrade M, Denarier E, Effantin G, Andrieux A, Gory-Faure S, Serre L, Arnal I

Nat Commun (2025) 16 pp. 6210-6210 [ DOI: doi:10.1038/s41467-025-61679-0 Pubmed: 40617876 ]

Sort by: Download
Showing 1 - 10 of 188. Page 1 of 19
Display:
Statistics
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Filter By

Current Database

  • EMDB [188]

Current status

  • REL [188]

Sample type

  • Complex [86]
  • Cellular component [65]
  • Sample [52]
  • Protein [41]
  • Cell [15]
  • Virus [6]
  • Ligand [2]
  • RNA [1]

Organism

  • Homo sapiens [83]
  • Chlamydomonas reinhardtii [25]
  • Plasmodium falciparum [10]
  • Tetrahymena thermophila [8]
  • Sus scrofa [8]
  • Mus musculus [7]
  • Nostoc sp. (strain pcc 7120 / sag 25.82 / utex 2576) [6]
  • Escherichia coli [5]
  • Strongylocentrotus purpuratus [5]
  • Xenopus laevis [5]
  • Bos taurus [5]
  • Paramecium tetraurelia [4]
  • Murine leukemia virus [3]
  • Pseudoalteromonas luteoviolacea [3]
  • Saccharomyces cerevisiae [3]
  • Influenza a virus [3]
  • Vibrio cholerae [3]
  • Human mastadenovirus c [2]
  • Human herpesvirus 3 [1]
  • Hepatitis b virus [1]
  • Rabies lyssavirus [1]
  • Chroomonas placoidea [1]
  • Methanosarcina mazei [1]
  • Shewanella oneidensis [1]
  • Escherichia coli [1]
  • Candidatus methylomirabilis lanthanidiphila [1]
  • Pyrococcus furiosus [1]
  • Myxococcus xanthus [1]
  • Thermus thermophilus [1]
  • Severe acute respiratory syndrome coronavirus [1]
  • Tetrahymena thermophila [1]
  • Saccharomyces cerevisiae [1]
  • Aequorea victoria [1]
  • Trichonympha sp. [1]
  • Limulus polyphemus [1]
  • Spodoptera frugiperda [1]
  • Danio rerio [1]

EM Method

  • Subtomogram averaging [104]
  • Tomography [72]
  • Single-particle [8]
  • Helical reconstruction [4]

Resolution

  • ≥ 2Å and < 3Å [2]
  • ≥ 3Å and < 4Å [1]
  • ≥ 4Å and < 5Å [1]
  • ≥ 5Å and < 6Å [1]
  • ≥ 8Å and < 12Å [4]
  • ≥ 12Å and < 16Å [58]
  • ≥ 20Å and < 30Å [35]
  • ≥ 30Å [77]

Model molecular weight

  • 50-100 kDa [1]

Release Date

  • 2025 [10]
  • 2024 [7]
  • 2023 [3]
  • 2022 [18]
  • 2021 [9]
  • 2020 [59]
  • 2019 [11]
  • 2018 [12]
  • 2017 [6]
  • 2016 [20]
  • 2015 [1]
  • 2014 [16]
  • 2013 [11]
  • 2012 [3]
  • 2009 [1]
  • 2007 [1]

Author by name

  • Akhouri RR [67]
  • Skoglund U [67]
  • Ofverstedt LG [52]
  • Purba ER [52]
  • Wilken G [52]
  • Maruyama IN [51]
  • Saita EI [51]
  • Nicastro D [23]
  • Furusho H [15]
  • Goel S [15]
  • Wahlgren M [15]
  • Steinmetz MO [14]
  • Bousquet C [13]
  • Chretien D [13]
  • Duchesne L [13]
  • Gaillard N [13]
  • Gibeaux R [13]
  • Guilloux G [13]
  • Guyomar C [13]
  • Heichette C [13]
  • Heumann JM [13]
  • Kikkawa M [13]
  • Ku S [13]
  • Oda T [13]
  • Jensen GJ [12]
  • Lin J [12]
  • Pilhofer M [10]
  • Yagi T [10]
  • Yanagisawa H [10]
  • Weiss GL [9]
  • Zhao Y [9]
  • Fu G [8]
  • Gui L [8]
  • Joachimiak E [8]
  • Klena N [8]
  • Phan N [8]
  • Wloga D [8]
  • Pigino G [7]
  • Song K [7]
  • Briegel A [6]
  • Forchhammer K [6]
  • Kieninger A [6]
  • Kieninger AK [6]
  • Maldener I [6]
  • Oikonomou CM [6]
  • Andrieux A [5]
  • Arnal I [5]
  • Bosc C [5]
  • Chang YW [5]
  • De Andrade M [5]
  • Delaroche J [5]
  • Denarier E [5]
  • Effantin G [5]
  • Gopal D [5]
  • Gory-faure S [5]
  • Guichard P [5]
  • Sadian Y [5]
  • Serre L [5]
  • Stahlberg H [5]
  • Urbanska P [5]
  • Wang Q [5]
  • Wu J [5]
  • Aeschlimann G [4]
  • Alvarez Viar G [4]
  • Ames P [4]
  • Baroud C [4]
  • Baroud CN [4]
  • Bayless B [4]
  • Bayless BA [4]
  • Bolognini D [4]
  • Capasso P [4]
  • Chang Y-W [4]
  • Dave D [4]
  • Dupuis-williams P [4]
  • Engel BD [4]
  • Erdmann PS [4]
  • Gaertig J [4]
  • Geimer S [4]
  • Goldie KN [4]
  • Grunewald K [4]
  • Gumbart JC [4]
  • Hamel V [4]
  • Kjaer A [4]
  • Kovacik L [4]
  • Le Guennec M [4]
  • Louka P [4]
  • Martino F [4]
  • Nievergelt AP [4]
  • Ortega DR [4]
  • Parkinson JS [4]
  • Riedel C [4]
  • Schaffer M [4]
  • Stoddard D [4]
  • Surwayanshi S [4]
  • Suryawanshi S [4]
  • Tassin AM [4]
  • Tomasi R [4]
  • Tomasi RF [4]
  • Vasishtan D [4]
  • Winey M [4]

Author by ORCID

  • Xu B [1]
  • Berciu C [1]
  • Oh Y [1]

Journal

  • FRONT ENDOCRINOL [51]
  • ELIFE [18]
  • BIORXIV [16]
  • CELL REP [16]
  • MOL BIOL CELL [12]
  • J CELL BIOL [10]
  • NAT COMMUN [10]
  • SCIENCE [8]
  • CELL [7]
  • EMBO J [6]
  • CURR BIOL [5]
  • J STRUCT BIOL [5]
  • PNAS [5]
  • J VIROL [4]
  • MOL MICROBIOL [4]
  • NAT STRUCT MOL BIOL [4]
  • FASEB J [3]
  • PLOS GENET [3]
  • EMBO REP [2]
  • NAT CELL BIOL [2]
  • NAT MICROBIOL [2]
  • TO BE PUBLISHED [2]
  • CELL DISCOV [1]
  • CELL REP PHYS SCI [1]
  • FRONT MICROBIOL [1]
  • J MOL BIOL [1]
  • MOL CELL [1]
  • PLOS PATHOG [1]
  • SCI REP [1]

Software

  • PEET [39]
  • IMOD [23]
  • COMET [15]
  • PEET, RUBY-HELIX [12]
  • MATLAB [9]
  • CHIMERA [6]
  • EMAN2 [6]
  • EMAN [4]
  • IMOD, TOMO3D [4]
  • TOMO3D [4]
  • ETOMO [3]
  • FREALIGN [2]
  • IMOD, PEET [2]
  • MOTIONCORR, IMOD, TOMOCTF, PEET, BSOFT [2]
  • AUTO3DEM [1]
  • CISTEM [1]
  • CRYOSPARC [1]
  • CTFFIND3 [1]
  • DYNAMO [1]
  • IHRSH [1]
  • IMOD, ETOMO, , PEET , SPIDER [1]
  • IMOD, PEET, TOMOCTF [1]
  • MOTIONCORR, IMOD, TOMOCTF, PEET [1]
  • MRC IMAGE PROCESSING PACKAGE [1]
  • PRIISM [1]
  • SPIDER [1]
  • SPIDER, EMAN [1]
  • UCSF CHIMERA [1]
  • WARP [1]

Microscope

  • FEI TITAN KRIOS [89]
  • FEI POLARA 300 [24]
  • FEI TECNAI F30 [23]
  • FEI TECNAI 20 [14]
  • JEOL 3100FFC [12]
  • TFS KRIOS [10]
  • FEI TITAN [7]
  • FEI TECNAI F20 [2]
  • TFS GLACIOS [2]
  • JEOL 1200EX [1]
  • JEOL 2100F [1]
  • JEOL 3100FEF [1]
  • JEOL 3200FS [1]
  • JEOL 3200FSC [1]

Electron Source

  • FIELD EMISSION GUN [173]
  • LAB6 [15]

Film or detector model

  • FEI FALCON II 4K X 4K [68]
  • GATAN K2 SUMMIT 4K X 4K [21]
  • TVIPS TEMCAM-F416 4K X 4K [21]
  • GATAN ULTRASCAN 1000 2K X 2K [20]
  • GATAN K3 6K X 4K [11]
  • GATAN ULTRASCAN 4000 4K X 4K [10]
  • GATAN K2 QUANTUM 4K X 4K [9]
  • GATAN K3 BIOQUANTUM 6K X 4K [5]
  • GATAN K2 4K X 4K [4]
  • GATAN MULTISCAN [3]
  • GENERIC CCD [3]
  • FEI FALCON III 4K X 4K [2]
  • GENERIC GATAN 2K X 2K [2]
  • KODAK SO-163 FILM [2]
  • FEI EAGLE 4K X 4K [1]
  • FEI FALCON IV 4K X 4K [1]
  • TVIPS TEMCAM-F816 8K X 8K [1]

External links

  • PDB [1]