Electron Microscopy Data Bank

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Current Database

Current status

Sample type

Organism

Homo sapiens [85]
Chlamydomonas reinhardtii [25]
Plasmodium falciparum [10]
Tetrahymena thermophila [8]
Sus scrofa [8]
Mus musculus [7]
Nostoc sp. (strain pcc 7120 / sag 25.82 / utex 2576) [6]
Thermus thermophilus [5]
Escherichia coli [5]
Strongylocentrotus purpuratus [5]
Xenopus laevis [5]
Bos taurus [5]
Paramecium tetraurelia [4]
Murine leukemia virus [3]
Pseudoalteromonas luteoviolacea [3]
Saccharomyces cerevisiae [3]
Influenza a virus [3]
Vibrio cholerae [3]
Human mastadenovirus c [2]
Synthetic construct [2]
Human herpesvirus 3 [1]
Hepatitis b virus [1]
Rabies lyssavirus [1]
Chroomonas placoidea [1]
Methanosarcina mazei [1]
Shewanella oneidensis [1]
Escherichia coli [1]
Candidatus methylomirabilis lanthanidiphila [1]
Pyrococcus furiosus [1]
Myxococcus xanthus [1]
Severe acute respiratory syndrome coronavirus [1]
Tetrahymena thermophila [1]
Saccharomyces cerevisiae [1]
Aequorea victoria [1]
Trichonympha sp. [1]
Limulus polyphemus [1]
Spodoptera frugiperda [1]
Danio rerio [1]

EM Method

Resolution

Model molecular weight

Release Date

Author by name

Akhouri RR [67]
Skoglund U [67]
Ofverstedt LG [52]
Purba ER [52]
Wilken G [52]
Maruyama IN [51]
Saita EI [51]
Nicastro D [23]
Furusho H [15]
Goel S [15]
Wahlgren M [15]
Steinmetz MO [14]
Bousquet C [13]
Chretien D [13]
Duchesne L [13]
Gaillard N [13]
Gibeaux R [13]
Guilloux G [13]
Guyomar C [13]
Heichette C [13]
Heumann JM [13]
Kikkawa M [13]
Ku S [13]
Oda T [13]
Jensen GJ [12]
Lin J [12]
Pilhofer M [10]
Yagi T [10]
Yanagisawa H [10]
Weiss GL [9]
Zhao Y [9]
Fu G [8]
Gui L [8]
Joachimiak E [8]
Klena N [8]
Phan N [8]
Wloga D [8]
Pigino G [7]
Song K [7]
Briegel A [6]
Daum B [6]
Forchhammer K [6]
Kieninger A [6]
Kieninger AK [6]
Maldener I [6]
Oikonomou CM [6]
Andrieux A [5]
Arnal I [5]
Averhoff B [5]
Bosc C [5]
Chang YW [5]
De Andrade M [5]
Delaroche J [5]
Denarier E [5]
Effantin G [5]
Gold VAM [5]
Gopal D [5]
Gory-faure S [5]
Guichard P [5]
Sadian Y [5]
Serre L [5]
Stahlberg H [5]
Urbanska P [5]
Wang Q [5]
Wu J [5]
Aeschlimann G [4]
Alvarez Viar G [4]
Ames P [4]
Baroud C [4]
Baroud CN [4]
Bayless B [4]
Bayless BA [4]
Bolognini D [4]
Buzzard E [4]
Capasso P [4]
Chang Y-W [4]
Dave D [4]
Dupuis-williams P [4]
Engel BD [4]
Erdmann PS [4]
Gaertig J [4]
Gaines M [4]
Geimer S [4]
Goldie KN [4]
Grunewald K [4]
Gumbart JC [4]
Hamel V [4]
Hanus C [4]
Isupov MN [4]
Kjaer A [4]
Kovacik L [4]
Le Guennec M [4]
Louka P [4]
Martino F [4]
Mclaren M [4]
Mclaren MJ [4]
Neuhaus A [4]
Nievergelt AP [4]
Ortega DR [4]
Parkinson JS [4]

Author by ORCID

Akhouri RR [17]
Skoglund U [15]
Furusho H [15]
Steinmetz MO [14]
Gibeaux R [13]
Kikkawa M [13]
Oda T [13]
Chretien D [13]
Nicastro D [13]
Bousquet C [13]
Yagi T [10]
Pilhofer M [10]
Yanagisawa H [10]
Weiss GL [9]
Gui L [8]
Fu G [8]
Joachimiak E [8]
Pigino G [7]
Lin J [7]
Daum B [6]
Oikonomou CM [6]
Lin J [5]
Wloga D [5]
Gory-faure S [5]
Arnal I [5]
Guichard P [5]
Stahlberg H [5]
Bosc C [5]
Denarier E [5]
Serre L [5]
Gold VAM [5]
Effantin G [5]
Gopal D [5]
Chang YW [5]
Nicastro D [5]
Briegel A [5]
Wu J [5]
Hamel V [4]
Capasso P [4]
Isupov MN [4]
Stoddard D [4]
Engel BD [4]
Klena N [4]
Buzzard E [4]
Le Guennec M [4]
Hanus C [4]
Riedel C [4]
Aeschlimann G [4]
Grunewald K [4]
Louka P [4]
Mclaren M [4]
Goldie KN [4]
Sikora M [4]
Dupuis-williams P [4]
Van Den Hoek H [4]
Shikuma NJ [3]
Schrofel A [3]
Mitsialis SA [3]
Chapman MS [3]
Stagg SM [3]
Kjr A [3]
Zhang X [3]
Yewdell JW [3]
Rettberg LA [3]
Tavakoli A [3]
Siebert CA [3]
Poprzeczko M [3]
Hadfield MG [3]
Harris AK [3]
Zhang S [3]
Bazan R [3]
Nicastro D [3]
Subbarao K [3]
Das SR [3]
Wloga D [3]
Subramaniam S [3]
Okada K [2]
Purba ER [2]
Diebolder CA [2]
Kuehlbrandt W [2]
Jensen GJ [2]
Zariwala MA [2]
Smith MC [2]
Wang S [1]
Di Paolo Nc [1]
Flatt JW [1]
Versantvoort W [1]
Kang A [1]
Vonck J [1]
Pena A [1]
Ruan J [1]
Gallucci L [1]
Shu T [1]
Cui Q [1]
Rachel R [1]
Wang JC-Y [1]
Speck C [1]
Chen Y [1]
Koning RI [1]
Yao H [1]

Journal

Software

Microscope

Electron Source

Film or detector model

External links

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Showing 1 - 10 of 195. Page 1 of 20

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EMD-70685

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Two Component Protein Nano-Particle T 3 . De Novo Design, Computationally Relaxed into Low Resolution Subtomogram Averaged CryoEM Map with Icosahedral Symmetry Applied

CryoEM

Release date: May 20, 2026
Resolution: 31.6 Å
EM Method: Subtomogram averaging
Fitted PDBs: 9op9

Q-score: 0.058
Similar entry percentile: 100%

Wang S, Xie Y, Chmielewski D, Weidle C, Shu T, Ahn G, Kibler RD, Hernandez C, Chen W, Duran DC, Carr A, Bera AK, Lee S, Decarreau J, Kang A, Brackenbrough E, Joyce E, Wu K, Borst AJ, Favor A, Huang B, DiMaio F, Holt LJ, Baker D

Nature (2026) 655 pp. 251-258 [ Pubmed: 42162421 DOI: doi:10.1038/s41586-026-10464-0 ]

EMD-56551

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Cryo-EM structure of the human holo-TFIIH-XPC complex bound to bulky lesion-mimic DNA composite map

Composite map

CryoEM

Release date: May 6, 2026
Resolution: 3.32 Å
EM Method: Single-particle
Fitted PDBs: 28js

Q-score: 0.398
Similar entry percentile: 25%

de Martin Garrido N, Haste CAF, Feng J, Cronin NB, Greber BJ

Sci Adv (2026) 12 pp. eaeb3506-eaeb3506 [ DOI: doi:10.1126/sciadv.aeb3506 Pubmed: 42490432 ]

EMD-56468

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Structure of the type IV pilus machinery from Thermus thermophilus in the open state C13 symmetry

CryoEM

Release date: April 22, 2026
Resolution: 115.0 Å
EM Method: Subtomogram averaging

Neuhaus A, McLaren M, Isupov MN, Gaines M, Buzzard E, Sikora M, Hanus C, Daum B, Averhoff B, Gold VAM

Commun Biol (2026) 9 [ Pubmed: 41917195 DOI: doi:10.1038/s42003-026-09762-0 ]

EMD-56469

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Structure of the type IV pilus machinery from Thermus thermophilus in the open state C6 symmetry

CryoEM

Release date: April 22, 2026
Resolution: 180.0 Å
EM Method: Subtomogram averaging

Neuhaus A, McLaren M, Isupov MN, Gaines M, Buzzard E, Sikora M, Hanus C, Daum B, Averhoff B, Gold VAM

Commun Biol (2026) 9 [ Pubmed: 41917195 DOI: doi:10.1038/s42003-026-09762-0 ]

EMD-56470

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Structure of the type IV pilus machinery from Thermus thermophilus in the closed state C13 symmetry

CryoEM

Release date: April 22, 2026
Resolution: 66.0 Å
EM Method: Subtomogram averaging

Neuhaus A, McLaren M, Isupov MN, Gaines M, Buzzard E, Sikora M, Hanus C, Daum B, Averhoff B, Gold VAM

Commun Biol (2026) 9 [ Pubmed: 41917195 DOI: doi:10.1038/s42003-026-09762-0 ]

EMD-56963

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Raw data

Ribosome subtomogram average

CryoEM

Release date: April 22, 2026
Resolution: 15.0 Å
EM Method: Subtomogram averaging

Downes K, Flood J, Nans A, Van der Verren S, Audhya A, Zanetti G

bioRxiv (2025) [ DOI: doi:10.1101/2025.07.29.667472 ]

EMD-56471

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Structure of the type IV pilus machinery from Thermus thermophilus in the closed state C6 symmetry

CryoEM

Release date: April 15, 2026
Resolution: 140.0 Å
EM Method: Subtomogram averaging

Neuhaus A, McLaren M, Isupov MN, Gaines M, Buzzard E, Sikora M, Hanus C, Daum B, Averhoff B, Gold VAM

Commun Biol (2026) 9 [ Pubmed: 41917195 DOI: doi:10.1038/s42003-026-09762-0 ]

EMD-53361

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Structure of the energy converting methyltransferase Mtr of Methanosarcina mazei in complex with a novel protein binder

Composite map

CryoEM

Release date: Dec. 24, 2025
Resolution: 2.1 Å
EM Method: Single-particle
Fitted PDBs: 9qts

Q-score: 0.619
Similar entry percentile: 53%

Reif-Trauttmansdorff T, Herdering E, Bohn S, Pascoa T, Kahnt J, Zimmer E, Kumar A, Schmitz RA, Schuller JM

Nat Commun (2025) 17 pp. 133-133 [ DOI: doi:10.1038/s41467-025-67705-5 Pubmed: 41436738 ]

EMD-51790

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Subtomogram average of intracellular influenza A virus hemagglutinin subtype H1

CryoEM

Release date: Oct. 29, 2025
Resolution: 30.0 Å
EM Method: Subtomogram averaging

Wachsmuth-Melm M, Peterl S, O'Riain A, Makroczyova J, Fischer K, Krischuns T, Vale-Costa S, Amorim MJ, Chlanda P

Nat Commun (2025) 16 pp. 9394-9394 [ Pubmed: 41130956 DOI: doi:10.1038/s41467-025-65117-z ]

EMD-46484

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Cryo-electron tomography and subtomogram averaging of WT mouse respiratory ciliary axoneme

CryoEM

Release date: Aug. 13, 2025
Resolution: 36.0 Å
EM Method: Subtomogram averaging

Zhao Y, Song K, Tavakoli A, Gui L, Fernandez-Gonzalez A, Zhang S, Dzeja PP, Mitsialis SA, Zhang X, Nicastro D

Nat Struct Mol Biol (2025) 32 pp. 1542-1554 [ Pubmed: 40579595 DOI: doi:10.1038/s41594-025-01594-6 ]

Sort by: Download

Showing 1 - 10 of 195. Page 1 of 20

Display:

Statistics

Filter By

Current Database

Current status

Sample type

Organism

Homo sapiens [85]
Chlamydomonas reinhardtii [25]
Plasmodium falciparum [10]
Tetrahymena thermophila [8]
Sus scrofa [8]
Mus musculus [7]
Nostoc sp. (strain pcc 7120 / sag 25.82 / utex 2576) [6]
Thermus thermophilus [5]
Escherichia coli [5]
Strongylocentrotus purpuratus [5]
Xenopus laevis [5]
Bos taurus [5]
Paramecium tetraurelia [4]
Murine leukemia virus [3]
Pseudoalteromonas luteoviolacea [3]
Saccharomyces cerevisiae [3]
Influenza a virus [3]
Vibrio cholerae [3]
Human mastadenovirus c [2]
Synthetic construct [2]
Human herpesvirus 3 [1]
Hepatitis b virus [1]
Rabies lyssavirus [1]
Chroomonas placoidea [1]
Methanosarcina mazei [1]
Shewanella oneidensis [1]
Escherichia coli [1]
Candidatus methylomirabilis lanthanidiphila [1]
Pyrococcus furiosus [1]
Myxococcus xanthus [1]
Severe acute respiratory syndrome coronavirus [1]
Tetrahymena thermophila [1]
Saccharomyces cerevisiae [1]
Aequorea victoria [1]
Trichonympha sp. [1]
Limulus polyphemus [1]
Spodoptera frugiperda [1]
Danio rerio [1]

EM Method

Resolution

Model molecular weight

Release Date

Author by name

Akhouri RR [67]
Skoglund U [67]
Ofverstedt LG [52]
Purba ER [52]
Wilken G [52]
Maruyama IN [51]
Saita EI [51]
Nicastro D [23]
Furusho H [15]
Goel S [15]
Wahlgren M [15]
Steinmetz MO [14]
Bousquet C [13]
Chretien D [13]
Duchesne L [13]
Gaillard N [13]
Gibeaux R [13]
Guilloux G [13]
Guyomar C [13]
Heichette C [13]
Heumann JM [13]
Kikkawa M [13]
Ku S [13]
Oda T [13]
Jensen GJ [12]
Lin J [12]
Pilhofer M [10]
Yagi T [10]
Yanagisawa H [10]
Weiss GL [9]
Zhao Y [9]
Fu G [8]
Gui L [8]
Joachimiak E [8]
Klena N [8]
Phan N [8]
Wloga D [8]
Pigino G [7]
Song K [7]
Briegel A [6]
Daum B [6]
Forchhammer K [6]
Kieninger A [6]
Kieninger AK [6]
Maldener I [6]
Oikonomou CM [6]
Andrieux A [5]
Arnal I [5]
Averhoff B [5]
Bosc C [5]
Chang YW [5]
De Andrade M [5]
Delaroche J [5]
Denarier E [5]
Effantin G [5]
Gold VAM [5]
Gopal D [5]
Gory-faure S [5]
Guichard P [5]
Sadian Y [5]
Serre L [5]
Stahlberg H [5]
Urbanska P [5]
Wang Q [5]
Wu J [5]
Aeschlimann G [4]
Alvarez Viar G [4]
Ames P [4]
Baroud C [4]
Baroud CN [4]
Bayless B [4]
Bayless BA [4]
Bolognini D [4]
Buzzard E [4]
Capasso P [4]
Chang Y-W [4]
Dave D [4]
Dupuis-williams P [4]
Engel BD [4]
Erdmann PS [4]
Gaertig J [4]
Gaines M [4]
Geimer S [4]
Goldie KN [4]
Grunewald K [4]
Gumbart JC [4]
Hamel V [4]
Hanus C [4]
Isupov MN [4]
Kjaer A [4]
Kovacik L [4]
Le Guennec M [4]
Louka P [4]
Martino F [4]
Mclaren M [4]
Mclaren MJ [4]
Neuhaus A [4]
Nievergelt AP [4]
Ortega DR [4]
Parkinson JS [4]

Author by ORCID

Akhouri RR [17]
Skoglund U [15]
Furusho H [15]
Steinmetz MO [14]
Gibeaux R [13]
Kikkawa M [13]
Oda T [13]
Chretien D [13]
Nicastro D [13]
Bousquet C [13]
Yagi T [10]
Pilhofer M [10]
Yanagisawa H [10]
Weiss GL [9]
Gui L [8]
Fu G [8]
Joachimiak E [8]
Pigino G [7]
Lin J [7]
Daum B [6]
Oikonomou CM [6]
Lin J [5]
Wloga D [5]
Gory-faure S [5]
Arnal I [5]
Guichard P [5]
Stahlberg H [5]
Bosc C [5]
Denarier E [5]
Serre L [5]
Gold VAM [5]
Effantin G [5]
Gopal D [5]
Chang YW [5]
Nicastro D [5]
Briegel A [5]
Wu J [5]
Hamel V [4]
Capasso P [4]
Isupov MN [4]
Stoddard D [4]
Engel BD [4]
Klena N [4]
Buzzard E [4]
Le Guennec M [4]
Hanus C [4]
Riedel C [4]
Aeschlimann G [4]
Grunewald K [4]
Louka P [4]
Mclaren M [4]
Goldie KN [4]
Sikora M [4]
Dupuis-williams P [4]
Van Den Hoek H [4]
Shikuma NJ [3]
Schrofel A [3]
Mitsialis SA [3]
Chapman MS [3]
Stagg SM [3]
Kjr A [3]
Zhang X [3]
Yewdell JW [3]
Rettberg LA [3]
Tavakoli A [3]
Siebert CA [3]
Poprzeczko M [3]
Hadfield MG [3]
Harris AK [3]
Zhang S [3]
Bazan R [3]
Nicastro D [3]
Subbarao K [3]
Das SR [3]
Wloga D [3]
Subramaniam S [3]
Okada K [2]
Purba ER [2]
Diebolder CA [2]
Kuehlbrandt W [2]
Jensen GJ [2]
Zariwala MA [2]
Smith MC [2]
Wang S [1]
Di Paolo Nc [1]
Flatt JW [1]
Versantvoort W [1]
Kang A [1]
Vonck J [1]
Pena A [1]
Ruan J [1]
Gallucci L [1]
Shu T [1]
Cui Q [1]
Rachel R [1]
Wang JC-Y [1]
Speck C [1]
Chen Y [1]
Koning RI [1]
Yao H [1]

Journal

Software

Microscope

Electron Source

Film or detector model

External links