Electron Microscopy Data Bank

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Kikkawa M [19]
Morikawa M [12]
Yamaguchi H [12]
Conway JF [6]
Freeman KG [6]
Hatfull GF [6]
Ho MC [6]
Huet A [6]
Jacobs-sera D [6]
Lowary TL [6]
Macale LS [6]
Mondal S [6]
Narsico JT [6]
Ortiz V [6]
Park D [6]
Perez RJ [6]
Podgorski J [6]
Silva BH [6]
White SJ [6]
Tani Y [5]
Yagi T [5]
Yanagisawa H [5]
Barr JN [3]
Beare PA [3]
Charlton FW [3]
Fontana J [3]
Ghosal D [3]
Hellert J [3]
Hover S [3]
Jensen GJ [3]
Kaplan M [3]
Kim KW [3]
Krzymowski E [3]
Larson CL [3]
Mankouri J [3]
Przemyslaw D [3]
Shepherd DC [3]
Swanson JJ [3]
Vankadari N [3]
Chmielewski D [2]
Fukuda Y [2]
Hatazawa S [2]
Heinzen RA [2]
Kobayashi Y [2]
Kurumizaka H [2]
Negishi L [2]
Takizawa Y [2]
Ahn G [1]
Akey CW [1]
Alvarez Viar G [1]
Ambrozak D [1]
Baker D [1]
Beddall M [1]
Belanger E [1]
Benlarbi M [1]
Bera AK [1]
Bolognini D [1]
Borst AJ [1]
Bosse JB [1]
Bourassa C [1]
Brackenbrough E [1]
Burke CW [1]
Bylund T [1]
Callahan V [1]
Capasso P [1]
Carr A [1]
Casner RG [1]
Cerutti G [1]
Chait BT [1]
Chatterjee D [1]
Chen HC [1]
Chen W [1]
Chiu TJ [1]
Chiu W [1]
Closson JD [1]
Decarreau J [1]
Dimaio F [1]
Diaz-salinas MA [1]
Dionne K [1]
Duran DC [1]
Echeverria I [1]
Fang F [1]
Favor A [1]
Fernandez-martinez J [1]
Finzi A [1]
Florez MB [1]
Fox JM [1]
Garcia JA [1]
Gardner CL [1]
Gardner KH [1]
Gottumukkala S [1]
Grange M [1]
Grunewald K [1]
Grunst MW [1]
Guirguis V [1]
Gumbart JC [1]
Hagen C [1]
Heinzen AH [1]
Hendrickson WA [1]
Henry AR [1]

Author by ORCID

Kikkawa M [19]
Yamaguchi H [12]
Morikawa M [12]
Freeman KG [6]
Mondal S [6]
Ho MC [6]
Conway JF [6]
Yagi T [5]
Yanagisawa H [5]
Tani Y [5]
Hover S [3]
Hellert J [3]
Mankouri J [3]
Barr JN [3]
Fontana J [3]
Swanson JJ [3]
Kurumizaka H [2]
Chmielewski D [2]
Hatazawa S [2]
Wang S [1]
Kang A [1]
Capasso P [1]
Rochon K [1]
Shu T [1]
Peng R [1]
Heumann JM [1]
Kibler RD [1]
Sanders S [1]
Bosse JB [1]
Munro JB [1]
Baker D [1]
Prazak V [1]
Matthies D [1]
Bera AK [1]
Wang J [1]
Lee S [1]
Schon A [1]
Bylund T [1]
Pigino G [1]
Shi Y [1]
Wu K [1]
Grunewald K [1]
Varberg JM [1]
Chen W [1]
Dimaio F [1]
Chiu W [1]
Cerutti G [1]
Weidle C [1]
Simmons G [1]
Favor A [1]
Xie Y [1]
Hagen C [1]
Fernandez-martinez J [1]
Fang F [1]
Schmid MF [1]
Jensen Y [1]
Duran DC [1]
Grange M [1]
Unruh J [1]
Kwong PD [1]
Jin J [1]
Ouch C [1]
Borst AJ [1]
Villa E [1]
Echeverria I [1]
Hernandez C [1]
Sutton MS [1]
Joyce E [1]

Journal

Software

Microscope

Electron Source

Film or detector model

External links

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EMD-70685

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Two Component Protein Nano-Particle T 3 . De Novo Design, Computationally Relaxed into Low Resolution Subtomogram Averaged CryoEM Map with Icosahedral Symmetry Applied

CryoEM

Release date: May 20, 2026
Resolution: 31.6 Å
EM Method: Subtomogram averaging
Fitted PDBs: 9op9

Q-score: 0.058
Similar entry percentile: 100%

Wang S, Xie Y, Chmielewski D, Weidle C, Shu T, Ahn G, Kibler RD, Hernandez C, Chen W, Duran DC, Carr A, Bera AK, Lee S, Decarreau J, Kang A, Brackenbrough E, Joyce E, Wu K, Borst AJ, Favor A, Huang B, DiMaio F, Holt LJ, Baker D

Nature (2026) 655 pp. 251-258 [ Pubmed: 42162421 DOI: doi:10.1038/s41586-026-10464-0 ]

EMD-70443

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Dimer of HIF-1a-ARNT Heterodimers Complexed on 52-bp HRE/HAS

CryoEM

Release date: June 11, 2025
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 9ofu

Q-score: 0.342
Similar entry percentile: 32%

Closson JD, Xu X, Zhang M, Tiyani TT, Marcelino LP, Isiorho EA, Nagati JS, Garcia JA, Gardner KH

PNAS (2026) 123 pp. e2514042123-e2514042123 [ DOI: doi:10.1073/pnas.2514042123 Pubmed: 42048441 ]

EMD-63144

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Subtomogram average of the HeLa nucleosome

CryoEM

Release date: April 30, 2025
Resolution: 14.9 Å
EM Method: Subtomogram averaging

Hatazawa S, Fukuda Y, Kobayashi Y, Negishi L, Kikkawa M, Takizawa Y, Kurumizaka H

Genes Cells (2025) 30 pp. e70019-e70019 [ DOI: doi:10.1111/gtc.70019 Pubmed: 40223781 ]

EMD-63145

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Subtomogram average of the HeLa nucleosome for mapping back

CryoEM

Release date: April 30, 2025
Resolution: 16.0 Å
EM Method: Subtomogram averaging

Hatazawa S, Fukuda Y, Kobayashi Y, Negishi L, Kikkawa M, Takizawa Y, Kurumizaka H

Genes Cells (2025) 30 pp. e70019-e70019 [ DOI: doi:10.1111/gtc.70019 Pubmed: 40223781 ]

EMD-43045

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Asymmetrical subunit from a Drp1 lattice on PA nanotubes

CryoEM

Release date: April 16, 2025
Resolution: 14.73 Å
EM Method: Single-particle
Fitted PDBs: 8v8t

Q-score: 0.038
Similar entry percentile: 32%

Peng R, Rochon K, Hutson AN, Stagg SM, Mears JA

J Mol Biol (2025) 437 pp. 169125-169125 [ Pubmed: 40185198 DOI: doi:10.1016/j.jmb.2025.169125 ]

EMD-46646

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HIV-1 BaL Env in complex with CD4 mimetic CJF-III-288 and 17b IgG

CryoEM

Release date: Oct. 16, 2024
Resolution: 21.5 Å
EM Method: Subtomogram averaging

Richard J, Grunst MW, Niu L, Diaz-Salinas MA, Tolbert WD, Marchitto L, Zhou F, Bourassa C, Yang D, Chiu TJ, Chen HC, Benlarbi M, Gottumukkala S, Li W, Dionne K, Belanger E, Chatterjee D, Medjahed H, Hendrickson WA, Sodroski J, Lang ZC, Morton AJ, Huang RK, Matthies D, Smith 3rd AB, Mothes W, Munro JB, Pazgier M, Finzi A

bioRxiv (2024) [ Pubmed: 39253431 DOI: doi:10.1101/2024.08.27.609961 ]

EMD-50563

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96nm repeat of the axonemal doublet from mouse respiratory cilia

CryoEM

Release date: Oct. 2, 2024
Resolution: 30.0 Å
EM Method: Subtomogram averaging

Alvarez Viar G, Klena N, Martino F, Nievergelt AP, Bolognini D, Capasso P, Pigino G

Curr Biol (2024) 34 pp. 4464-4475.e9 [ DOI: doi:10.1016/j.cub.2024.08.021 Pubmed: 39270640 ]

EMD-46702

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Subtomogram averaging of Bxb1 phage capsid DNA-filled during the infection state

CryoEM

Release date: Sept. 18, 2024
Resolution: 11.65 Å
EM Method: Subtomogram averaging

Freeman KG, Mondal S, Macale LS, Podgorski J, White SJ, Silva BH, Ortiz V, Huet A, Perez RJ, Narsico JT, Ho MC, Jacobs-Sera D, Lowary TL, Conway JF, Park D, Hatfull GF

Cell (2025) 188 pp. 2925-2942.e17 [ Pubmed: 40239650 DOI: doi:10.1016/j.cell.2025.03.027 ]

EMD-46703

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Subtomogram averaging of Bxb1 phage tail tube DNA-filled during the infection state

CryoEM

Release date: Sept. 18, 2024
Resolution: 7.0 Å
EM Method: Subtomogram averaging

Freeman KG, Mondal S, Macale LS, Podgorski J, White SJ, Silva BH, Ortiz V, Huet A, Perez RJ, Narsico JT, Ho MC, Jacobs-Sera D, Lowary TL, Conway JF, Park D, Hatfull GF

Cell (2025) 188 pp. 2925-2942.e17 [ Pubmed: 40239650 DOI: doi:10.1016/j.cell.2025.03.027 ]

EMD-46704

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Subtomogram averaging of Bxb1 phage capsid emptied during the infection state

CryoEM

Release date: Sept. 18, 2024
Resolution: 12.5 Å
EM Method: Subtomogram averaging

Freeman KG, Mondal S, Macale LS, Podgorski J, White SJ, Silva BH, Ortiz V, Huet A, Perez RJ, Narsico JT, Ho MC, Jacobs-Sera D, Lowary TL, Conway JF, Park D, Hatfull GF

Cell (2025) 188 pp. 2925-2942.e17 [ Pubmed: 40239650 DOI: doi:10.1016/j.cell.2025.03.027 ]

Sort by: Download

Showing 1 - 10 of 40. Page 1 of 4

Display:

Statistics

Filter By

Current Database

Current status

Sample type

Organism

EM Method

Resolution

Model molecular weight

Release Date

Author by name

Kikkawa M [19]
Morikawa M [12]
Yamaguchi H [12]
Conway JF [6]
Freeman KG [6]
Hatfull GF [6]
Ho MC [6]
Huet A [6]
Jacobs-sera D [6]
Lowary TL [6]
Macale LS [6]
Mondal S [6]
Narsico JT [6]
Ortiz V [6]
Park D [6]
Perez RJ [6]
Podgorski J [6]
Silva BH [6]
White SJ [6]
Tani Y [5]
Yagi T [5]
Yanagisawa H [5]
Barr JN [3]
Beare PA [3]
Charlton FW [3]
Fontana J [3]
Ghosal D [3]
Hellert J [3]
Hover S [3]
Jensen GJ [3]
Kaplan M [3]
Kim KW [3]
Krzymowski E [3]
Larson CL [3]
Mankouri J [3]
Przemyslaw D [3]
Shepherd DC [3]
Swanson JJ [3]
Vankadari N [3]
Chmielewski D [2]
Fukuda Y [2]
Hatazawa S [2]
Heinzen RA [2]
Kobayashi Y [2]
Kurumizaka H [2]
Negishi L [2]
Takizawa Y [2]
Ahn G [1]
Akey CW [1]
Alvarez Viar G [1]
Ambrozak D [1]
Baker D [1]
Beddall M [1]
Belanger E [1]
Benlarbi M [1]
Bera AK [1]
Bolognini D [1]
Borst AJ [1]
Bosse JB [1]
Bourassa C [1]
Brackenbrough E [1]
Burke CW [1]
Bylund T [1]
Callahan V [1]
Capasso P [1]
Carr A [1]
Casner RG [1]
Cerutti G [1]
Chait BT [1]
Chatterjee D [1]
Chen HC [1]
Chen W [1]
Chiu TJ [1]
Chiu W [1]
Closson JD [1]
Decarreau J [1]
Dimaio F [1]
Diaz-salinas MA [1]
Dionne K [1]
Duran DC [1]
Echeverria I [1]
Fang F [1]
Favor A [1]
Fernandez-martinez J [1]
Finzi A [1]
Florez MB [1]
Fox JM [1]
Garcia JA [1]
Gardner CL [1]
Gardner KH [1]
Gottumukkala S [1]
Grange M [1]
Grunewald K [1]
Grunst MW [1]
Guirguis V [1]
Gumbart JC [1]
Hagen C [1]
Heinzen AH [1]
Hendrickson WA [1]
Henry AR [1]

Author by ORCID

Kikkawa M [19]
Yamaguchi H [12]
Morikawa M [12]
Freeman KG [6]
Mondal S [6]
Ho MC [6]
Conway JF [6]
Yagi T [5]
Yanagisawa H [5]
Tani Y [5]
Hover S [3]
Hellert J [3]
Mankouri J [3]
Barr JN [3]
Fontana J [3]
Swanson JJ [3]
Kurumizaka H [2]
Chmielewski D [2]
Hatazawa S [2]
Wang S [1]
Kang A [1]
Capasso P [1]
Rochon K [1]
Shu T [1]
Peng R [1]
Heumann JM [1]
Kibler RD [1]
Sanders S [1]
Bosse JB [1]
Munro JB [1]
Baker D [1]
Prazak V [1]
Matthies D [1]
Bera AK [1]
Wang J [1]
Lee S [1]
Schon A [1]
Bylund T [1]
Pigino G [1]
Shi Y [1]
Wu K [1]
Grunewald K [1]
Varberg JM [1]
Chen W [1]
Dimaio F [1]
Chiu W [1]
Cerutti G [1]
Weidle C [1]
Simmons G [1]
Favor A [1]
Xie Y [1]
Hagen C [1]
Fernandez-martinez J [1]
Fang F [1]
Schmid MF [1]
Jensen Y [1]
Duran DC [1]
Grange M [1]
Unruh J [1]
Kwong PD [1]
Jin J [1]
Ouch C [1]
Borst AJ [1]
Villa E [1]
Echeverria I [1]
Hernandez C [1]
Sutton MS [1]
Joyce E [1]

Journal

Software

Microscope

Electron Source

Film or detector model

External links