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grant_code:"R01 GM099604"

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Current Database

  • EMDB [11]

Current status

  • REL [11]

Sample type

  • Complex [11]
  • Protein [10]
  • RNA [10]
  • DNA [6]
  • Ligand [6]

Organism

  • Acidothermus cellulolyticus [6]
  • Synthetic construct [5]
  • Lactococcus lactis [4]
  • Acidothermus cellulolyticus [1]
  • Saccharomyces cerevisiae [1]

EM Method

  • Single-particle [11]

Resolution

  • ≥ 2Å and < 3Å [7]
  • ≥ 3Å and < 4Å [3]
  • ≥ 8Å and < 12Å [1]

Model molecular weight

  • 100-250 kDa [6]
  • 250-500 kDa [4]

Release Date

  • 2023 [6]
  • 2022 [4]
  • 2020 [1]

Author by name

  • Li H [11]
  • Rai J [11]
  • Barakat MR [6]
  • Das A [6]
  • Medina ML [6]
  • Roth MO [6]
  • Shu Y [6]
  • He H [5]
  • Goswami H [4]
  • Sridhara S [4]
  • Terns MP [4]
  • Whyms C [4]
  • Woodside W [4]
  • Fan J [1]
  • Sousa D [1]
  • Spear J [1]
  • Stagg SM [1]
  • Tian S [1]
  • Yu G [1]
  • Yu HG [1]
  • Zhao Y [1]

Author by ORCID

  • Li H [11]
  • Das A [6]
  • Medina ML [6]
  • Roth MO [6]
  • Rai J [5]
  • Whyms C [4]
  • Terns MP [4]
  • Sridhara S [4]
  • Woodside W [4]
  • Stagg SM [1]
  • Zhao Y [1]

Journal

  • NAT CATAL [6]
  • COMMUN BIOL [4]
  • SCI REP [1]

Software

  • RELION [6]

Microscope

  • FEI TITAN KRIOS [11]

Electron Source

  • FIELD EMISSION GUN [11]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [10]
  • DIRECT ELECTRON DE-64 8K X 8K [1]

External links

  • AlphaFold DB [10]
  • Gene Ontology [10]
  • InterPro [10]
  • PDB [10]
  • PDBe-Kb [10]
  • Pfam [10]
  • UniProt [10]
  • ChEBI [6]
  • DrugBank [6]
  • ChEMBL [5]
  • SCOP2 [1]
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Showing 1 - 10 of 11. Page 1 of 2
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EMD-27141
Download Map
3D View
Structure of Acidothermus cellulolyticus Cas9 ternary complex Cleavage Intermediate 2
Release date: Dec. 20, 2023
Resolution: 2.43 Å
EM Method: Single-particle
Fitted PDBs: 8d2k
Q-score: 0.626

Das A, Rai J, Roth MO, Shu Y, Medina ML, Barakat MR, Li H

Nat Catal (2023) 6 pp. 969-977 [ Pubmed: 38348449 DOI: doi:10.1038/s41929-023-01031-1 ]

EMD-27142
Download Map
3D View
Structure of Acidothermus cellulolyticus Cas9 ternary complex Cleavage Intermediate 1
Release date: Dec. 20, 2023
Resolution: 2.21 Å
EM Method: Single-particle
Fitted PDBs: 8d2l
Q-score: 0.661

Das A, Rai J, Roth MO, Shu Y, Medina ML, Barakat MR, Li H

Nat Catal (2023) 6 pp. 969-977 [ Pubmed: 38348449 DOI: doi:10.1038/s41929-023-01031-1 ]

EMD-27143
Download Map
3D View
Structure of Acidothermus cellulolyticus Cas9 ternary complex Pre-cleavage
Release date: Dec. 20, 2023
Resolution: 2.88 Å
EM Method: Single-particle
Fitted PDBs: 8d2n
Q-score: 0.459

Das A, Rai J, Roth MO, Shu Y, Medina ML, Barakat MR, Li H

Nat Catal (2023) 6 pp. 969-977 [ Pubmed: 38348449 DOI: doi:10.1038/s41929-023-01031-1 ]

EMD-27144
Download Map
3D View
Structure of Acidothermus cellulolyticus Cas9 ternary complex Post-cleavage 2
Release date: Dec. 20, 2023
Resolution: 2.66 Å
EM Method: Single-particle
Fitted PDBs: 8d2o
Q-score: 0.56

Das A, Rai J, Roth MO, Shu Y, Medina ML, Barakat MR, Li H

Nat Catal (2023) 6 pp. 969-977 [ Pubmed: 38348449 DOI: doi:10.1038/s41929-023-01031-1 ]

EMD-27145
Download Map
3D View
Structure of Acidothermus cellulolyticus Cas9 ternary complex Target bound
Release date: Dec. 20, 2023
Resolution: 2.78 Å
EM Method: Single-particle
Fitted PDBs: 8d2p
Q-score: 0.572

Das A, Rai J, Roth MO, Shu Y, Medina ML, Barakat MR, Li H

Nat Catal (2023) 6 pp. 969-977 [ Pubmed: 38348449 DOI: doi:10.1038/s41929-023-01031-1 ]

EMD-27146
Download Map
3D View
Structure of Acidothermus cellulolyticus Cas9 ternary complex Post-cleavage 1
Release date: Dec. 20, 2023
Resolution: 2.58 Å
EM Method: Single-particle
Fitted PDBs: 8d2q
Q-score: 0.522

Das A, Rai J, Roth MO, Shu Y, Medina ML, Barakat MR, Li H

Nat Catal (2023) 6 pp. 969-977 [ Pubmed: 38348449 DOI: doi:10.1038/s41929-023-01031-1 ]

EMD-22266
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3D View
Structure of the Lactococcus lactis Csm CTR_4:3 CRISPR-Cas Complex
Release date: Jan. 12, 2022
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 6xn3
Q-score: 0.467

Sridhara S, Rai J, Whyms C, Goswami H, He H, Woodside W, Terns MP, Li H

Commun Biol (2022) 5 pp. 279-279 [ Pubmed: 35351985 DOI: doi:10.1038/s42003-022-03187-1 ]

EMD-22267
Download Map
3D View
Structure of the Lactococcus lactis Csm CTR_3:2 CRISPR-Cas Complex
Release date: Jan. 12, 2022
Resolution: 3.35 Å
EM Method: Single-particle
Fitted PDBs: 6xn4
Q-score: 0.414

Sridhara S, Rai J, Whyms C, Goswami H, He H, Woodside W, Terns MP, Li H

Commun Biol (2022) 5 pp. 279-279 [ Pubmed: 35351985 DOI: doi:10.1038/s42003-022-03187-1 ]

EMD-22268
Download Map
3D View
Structure of the Lactococcus lactis Csm Apo- CRISPR-Cas Complex
Release date: Jan. 12, 2022
Resolution: 2.97 Å
EM Method: Single-particle
Fitted PDBs: 6xn5
Q-score: 0.486

Sridhara S, Rai J, Whyms C, Goswami H, He H, Woodside W, Terns MP, Li H

Commun Biol (2022) 5 pp. 279-279 [ Pubmed: 35351985 DOI: doi:10.1038/s42003-022-03187-1 ]

EMD-22269
Download Map
3D View
Structure of the Lactococcus lactis Csm NTR CRISPR-Cas Complex
Release date: Jan. 12, 2022
Resolution: 3.47 Å
EM Method: Single-particle
Fitted PDBs: 6xn7
Q-score: 0.494

Sridhara S, Rai J, Whyms C, Goswami H, He H, Woodside W, Terns MP, Li H

Commun Biol (2022) 5 pp. 279-279 [ Pubmed: 35351985 DOI: doi:10.1038/s42003-022-03187-1 ]

Sort by: Download
Showing 1 - 10 of 11. Page 1 of 2
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [11]

Current status

  • REL [11]

Sample type

  • Complex [11]
  • Protein [10]
  • RNA [10]
  • DNA [6]
  • Ligand [6]

Organism

  • Acidothermus cellulolyticus [6]
  • Synthetic construct [5]
  • Lactococcus lactis [4]
  • Acidothermus cellulolyticus [1]
  • Saccharomyces cerevisiae [1]

EM Method

  • Single-particle [11]

Resolution

  • ≥ 2Å and < 3Å [7]
  • ≥ 3Å and < 4Å [3]
  • ≥ 8Å and < 12Å [1]

Model molecular weight

  • 100-250 kDa [6]
  • 250-500 kDa [4]

Release Date

  • 2023 [6]
  • 2022 [4]
  • 2020 [1]

Author by name

  • Li H [11]
  • Rai J [11]
  • Barakat MR [6]
  • Das A [6]
  • Medina ML [6]
  • Roth MO [6]
  • Shu Y [6]
  • He H [5]
  • Goswami H [4]
  • Sridhara S [4]
  • Terns MP [4]
  • Whyms C [4]
  • Woodside W [4]
  • Fan J [1]
  • Sousa D [1]
  • Spear J [1]
  • Stagg SM [1]
  • Tian S [1]
  • Yu G [1]
  • Yu HG [1]
  • Zhao Y [1]

Author by ORCID

  • Li H [11]
  • Das A [6]
  • Medina ML [6]
  • Roth MO [6]
  • Rai J [5]
  • Whyms C [4]
  • Terns MP [4]
  • Sridhara S [4]
  • Woodside W [4]
  • Stagg SM [1]
  • Zhao Y [1]

Journal

  • NAT CATAL [6]
  • COMMUN BIOL [4]
  • SCI REP [1]

Software

  • RELION [6]

Microscope

  • FEI TITAN KRIOS [11]

Electron Source

  • FIELD EMISSION GUN [11]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [10]
  • DIRECT ELECTRON DE-64 8K X 8K [1]

External links

  • AlphaFold DB [10]
  • Gene Ontology [10]
  • InterPro [10]
  • PDB [10]
  • PDBe-Kb [10]
  • Pfam [10]
  • UniProt [10]
  • ChEBI [6]
  • DrugBank [6]
  • ChEMBL [5]
  • SCOP2 [1]