Happy Holidays and New year from the EMDB! Please be advised that the EMDB team will be operating at reduced capacity between December 15th - January 12th. With this in mind we would ask that you be prepared for longer reply times through both our helpdesk system and the OneDep deposition system. well done on a productive 2025, wishing you all the best and we will see you in 2026!

Edit your search query here and hit Return to execute it:
grant_code:"BFU2017-88736-R"

Filter By

Current Database

  • EMDB [15]

Current status

  • REL [15]

Sample type

  • Protein [15]
  • Complex [12]
  • Ligand [8]
  • Virus [3]

Organism

  • Homo sapiens [12]
  • Human picobirnavirus [2]
  • Human picobirnavirus [1]

EM Method

  • Single-particle [15]

Resolution

  • ≥ 2Å and < 3Å [3]
  • ≥ 3Å and < 4Å [2]
  • ≥ 4Å and < 5Å [4]
  • ≥ 5Å and < 6Å [1]
  • ≥ 6Å and < 8Å [2]
  • ≥ 8Å and < 12Å [2]
  • ≥ 12Å and < 16Å [1]

Model molecular weight

  • 500-1000 kDa [8]
  • 5-10 MDa [3]

Release Date

  • 2022 [12]
  • 2020 [3]

Author by name

  • Caston JR [15]
  • Luque D [15]
  • Mata CP [15]
  • Gomis-ruth FX [12]
  • Goulas T [12]
  • Mendes SR [12]
  • Irigoyen N [3]
  • Ortega-esteban A [3]
  • Rodriguez JM [3]
  • Rodriguez-espinosa MJ [3]
  • De Pablo Pj [3]

Author by ORCID

  • Luque D [15]
  • Caston JR [15]
  • Mata CP [15]
  • Gomis-ruth FX [12]
  • Goulas T [12]
  • Mendes SR [12]
  • Irigoyen N [3]
  • Ortega-esteban A [3]
  • De Pablo Pj [3]

Journal

  • PNAS [12]
  • J VIROL [3]

Software

  • RELION [15]
  • CTFFIND [4]

Microscope

  • FEI TITAN KRIOS [15]

Electron Source

  • FIELD EMISSION GUN [15]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [12]
  • FEI FALCON III 4K X 4K [3]

External links

  • PDBe-Kb [15]
  • UniProt [15]
  • AlphaFold DB [12]
  • Complex Portal [12]
  • Gene Ontology [11]
  • InterPro [11]
  • PDB [11]
  • Pfam [11]
  • ChEBI [8]
  • ChEMBL [8]
Sort by: Download
Showing 1 - 10 of 15. Page 1 of 2
Display:
Statistics
×

Download











































Preview first 10
Download
EMD-12747
Download Map
3D View
h-alpha2M 4 native I
Release date: April 20, 2022
Resolution: 4.5 Å
EM Method: Single-particle
Fitted PDBs: 7o7l
Q-score: 0.142

Luque D, Goulas T, Mata CP, Mendes SR, Gomis-Ruth FX, Caston JR

PNAS (2022) 119 pp. e2200102119-e2200102119 [ Pubmed: 35500114 DOI: doi:10.1073/pnas.2200102119 ]

EMD-12748
Download Map
3D View
h-alpha2M 4 native II
Release date: April 13, 2022
Resolution: 6.6 Å
EM Method: Single-particle
Fitted PDBs: 7o7m
Q-score: 0.097

Luque D, Goulas T, Mata CP, Mendes SR, Gomis-Ruth FX, Caston JR

PNAS (2022) 119 pp. e2200102119-e2200102119 [ Pubmed: 35500114 DOI: doi:10.1073/pnas.2200102119 ]

EMD-12750
Download Map
3D View
h-alpha2M 4 semiactivated I state
Release date: April 13, 2022
Resolution: 7.3 Å
EM Method: Single-particle
Fitted PDBs: 7o7n
Q-score: 0.11

Luque D, Goulas T, Mata CP, Mendes SR, Gomis-Ruth FX, Caston JR

PNAS (2022) 119 pp. e2200102119-e2200102119 [ Pubmed: 35500114 DOI: doi:10.1073/pnas.2200102119 ]

EMD-12751
Download Map
3D View
h-alpha2M 4 semiactivated II state
Release date: April 13, 2022
Resolution: 4.8 Å
EM Method: Single-particle
Fitted PDBs: 7o7o
Q-score: 0.202

Luque D, Goulas T, Mata CP, Mendes SR, Gomis-Ruth FX, Caston JR

PNAS (2022) 119 pp. e2200102119-e2200102119 [ Pubmed: 35500114 DOI: doi:10.1073/pnas.2200102119 ]

EMD-12752
Download Map
3D View
h-alpha2M 4 activated state
Release date: April 13, 2022
Resolution: 4.6 Å
EM Method: Single-particle
Fitted PDBs: 7o7p
Q-score: 0.221

Luque D, Goulas T, Mata CP, Mendes SR, Gomis-Ruth FX, Caston JR

PNAS (2022) 119 pp. e2200102119-e2200102119 [ Pubmed: 35500114 DOI: doi:10.1073/pnas.2200102119 ]

EMD-12753
Download Map
3D View
h-alpha2M 4 trypsin-activated state
Release date: April 13, 2022
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7o7q
Q-score: 0.356

Luque D, Goulas T, Mata CP, Mendes SR, Gomis-Ruth FX, Caston JR

PNAS (2022) 119 pp. e2200102119-e2200102119 [ Pubmed: 35500114 DOI: doi:10.1073/pnas.2200102119 ]

EMD-12754
Download Map
3D View
h-alpha2M 4 plasmin-activated I state
Release date: April 13, 2022
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 7o7r
Q-score: 0.296

Luque D, Goulas T, Mata CP, Mendes SR, Gomis-Ruth FX, Caston JR

PNAS (2022) 119 pp. e2200102119-e2200102119 [ Pubmed: 35500114 DOI: doi:10.1073/pnas.2200102119 ]

EMD-12755
Download Map
3D View
h-alpha2M 4 plasmin-activated II state
Release date: April 13, 2022
Resolution: 4.3 Å
EM Method: Single-particle
Fitted PDBs: 7o7s
Q-score: 0.183

Luque D, Goulas T, Mata CP, Mendes SR, Gomis-Ruth FX, Caston JR

PNAS (2022) 119 pp. e2200102119-e2200102119 [ Pubmed: 35500114 DOI: doi:10.1073/pnas.2200102119 ]

EMD-12941
Download Map
3D View
h-alpha2M 4 transient I state
Release date: April 13, 2022
Resolution: 5.2 Å
EM Method: Single-particle

Luque D, Goulas T, Mata CP, Mendes SR, Gomis-Ruth FX, Caston JR

PNAS (2022) 119 pp. e2200102119-e2200102119 [ Pubmed: 35500114 DOI: doi:10.1073/pnas.2200102119 ]

EMD-12942
Download Map
3D View
h-alpha2M 4 transient II state
Release date: April 13, 2022
Resolution: 12.0 Å
EM Method: Single-particle

Luque D, Goulas T, Mata CP, Mendes SR, Gomis-Ruth FX, Caston JR

PNAS (2022) 119 pp. e2200102119-e2200102119 [ Pubmed: 35500114 DOI: doi:10.1073/pnas.2200102119 ]

Sort by: Download
Showing 1 - 10 of 15. Page 1 of 2
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [15]

Current status

  • REL [15]

Sample type

  • Protein [15]
  • Complex [12]
  • Ligand [8]
  • Virus [3]

Organism

  • Homo sapiens [12]
  • Human picobirnavirus [2]
  • Human picobirnavirus [1]

EM Method

  • Single-particle [15]

Resolution

  • ≥ 2Å and < 3Å [3]
  • ≥ 3Å and < 4Å [2]
  • ≥ 4Å and < 5Å [4]
  • ≥ 5Å and < 6Å [1]
  • ≥ 6Å and < 8Å [2]
  • ≥ 8Å and < 12Å [2]
  • ≥ 12Å and < 16Å [1]

Model molecular weight

  • 500-1000 kDa [8]
  • 5-10 MDa [3]

Release Date

  • 2022 [12]
  • 2020 [3]

Author by name

  • Caston JR [15]
  • Luque D [15]
  • Mata CP [15]
  • Gomis-ruth FX [12]
  • Goulas T [12]
  • Mendes SR [12]
  • Irigoyen N [3]
  • Ortega-esteban A [3]
  • Rodriguez JM [3]
  • Rodriguez-espinosa MJ [3]
  • De Pablo Pj [3]

Author by ORCID

  • Luque D [15]
  • Caston JR [15]
  • Mata CP [15]
  • Gomis-ruth FX [12]
  • Goulas T [12]
  • Mendes SR [12]
  • Irigoyen N [3]
  • Ortega-esteban A [3]
  • De Pablo Pj [3]

Journal

  • PNAS [12]
  • J VIROL [3]

Software

  • RELION [15]
  • CTFFIND [4]

Microscope

  • FEI TITAN KRIOS [15]

Electron Source

  • FIELD EMISSION GUN [15]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [12]
  • FEI FALCON III 4K X 4K [3]

External links

  • PDBe-Kb [15]
  • UniProt [15]
  • AlphaFold DB [12]
  • Complex Portal [12]
  • Gene Ontology [11]
  • InterPro [11]
  • PDB [11]
  • Pfam [11]
  • ChEBI [8]
  • ChEMBL [8]