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grant_code:"BB/P01948X/1"

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Current Database

  • EMDB [4]

Current status

  • REL [4]

Sample type

  • Complex [4]
  • Protein [4]
  • Ligand [1]

Organism

  • Cupriavidus metallidurans [2]
  • Saccharomyces cerevisiae [2]
  • Homo sapiens [2]

EM Method

  • Single-particle [4]

Resolution

  • ≥ 2Å and < 3Å [1]
  • ≥ 3Å and < 4Å [3]

Model molecular weight

  • 50-100 kDa [2]
  • 250-500 kDa [2]

Release Date

  • 2022 [2]
  • 2021 [2]

Author by name

  • Stansfeld PJ [4]
  • Ashraf KU [2]
  • Carvalho P [2]
  • Clarke OB [2]
  • Corey RA [2]
  • Deme JC [2]
  • Dufrisne MB [2]
  • Erramilli SK [2]
  • Giacometti SI [2]
  • Graham CLB [2]
  • Herrera CM [2]
  • Kloss B [2]
  • Klug YA [2]
  • Kossiakoff AA [2]
  • Lea SM [2]
  • Loukeris M [2]
  • Mancia F [2]
  • Mcconville TH [2]
  • Nosol K [2]
  • Nygaard R [2]
  • Petrou VI [2]
  • Renne MF [2]
  • Roper DI [2]
  • Skorupinska-tudek K [2]
  • Swiezewska E [2]
  • Trent MS [2]
  • Uhlemann AC [2]
  • Vickery ON [2]
  • Zinkle AP [2]

Author by ORCID

  • Stansfeld PJ [4]
  • Trent MS [2]
  • Erramilli SK [2]
  • Lea SM [2]
  • Klug YA [2]
  • Nygaard R [2]
  • Ashraf KU [2]
  • Loukeris M [2]
  • Petrou VI [2]
  • Swiezewska E [2]
  • Graham CLB [2]
  • Giacometti SI [2]
  • Carvalho P [2]
  • Uhlemann AC [2]
  • Roper DI [2]
  • Kloss B [2]
  • Renne MF [2]
  • Corey RA [2]
  • Clarke OB [2]
  • Nosol K [2]
  • Mancia F [2]

Journal

  • NAT COMMUN [2]
  • NATURE [2]

Software

  • CRYOSPARC [2]

Microscope

  • FEI TITAN [2]
  • FEI TITAN KRIOS [2]

Electron Source

  • FIELD EMISSION GUN [4]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [3]
  • GATAN K2 SUMMIT 4K X 4K [1]

External links

  • PDB [4]
  • UniProt [4]
  • AlphaFold DB [2]
  • Gene Ontology [2]
  • InterPro [2]
  • PDBe-Kb [2]
  • Pfam [2]
  • ChEBI [1]
  • ChEMBL [1]
  • DrugBank [1]
  • EMPIAR [1]
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EMD-26054
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Raw data
EMPIAR-10938
Single-Particle Cryo-EM Structure of the WaaL O-antigen ligase in its ligand bound state
Release date: April 6, 2022
Resolution: 3.23 Å
EM Method: Single-particle
Fitted PDBs: 7tpg
Q-score: 0.497

Ashraf KU, Nygaard R, Vickery ON, Erramilli SK, Herrera CM, McConville TH, Petrou VI, Giacometti SI, Dufrisne MB, Nosol K, Zinkle AP, Graham CLB, Loukeris M, Kloss B, Skorupinska-Tudek K, Swiezewska E, Roper DI, Clarke OB, Uhlemann AC, Kossiakoff AA, Trent MS, Stansfeld PJ, Mancia F

Nature (2022) 604 pp. 371-376 [ DOI: doi:10.1038/s41586-022-04555-x Pubmed: 35388216 ]

EMD-26057
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Single-Particle Cryo-EM Structure of the WaaL O-antigen ligase in its apo state
Release date: April 6, 2022
Resolution: 3.46 Å
EM Method: Single-particle
Fitted PDBs: 7tpj
Q-score: 0.431

Ashraf KU, Nygaard R, Vickery ON, Erramilli SK, Herrera CM, McConville TH, Petrou VI, Giacometti SI, Dufrisne MB, Nosol K, Zinkle AP, Graham CLB, Loukeris M, Kloss B, Skorupinska-Tudek K, Swiezewska E, Roper DI, Clarke OB, Uhlemann AC, Kossiakoff AA, Trent MS, Stansfeld PJ, Mancia F

Nature (2022) 604 pp. 371-376 [ DOI: doi:10.1038/s41586-022-04555-x Pubmed: 35388216 ]

EMD-13103
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3D View
Cryo-EM structure of yeast Sei1
Release date: Oct. 13, 2021
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 7oxp
Q-score: 0.556

Klug YA, Deme JC, Corey RA, Renne MF, Stansfeld PJ, Lea SM, Carvalho P

Nat Commun (2021) 12 pp. 5892-5892 [ Pubmed: 34625558 DOI: doi:10.1038/s41467-021-26162-6 ]

EMD-13104
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Cryo-EM structure of yeast Sei1 with locking helix deletion
Release date: Oct. 13, 2021
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7oxr
Q-score: 0.561

Klug YA, Deme JC, Corey RA, Renne MF, Stansfeld PJ, Lea SM, Carvalho P

Nat Commun (2021) 12 pp. 5892-5892 [ Pubmed: 34625558 DOI: doi:10.1038/s41467-021-26162-6 ]

Sort by: Download
Showing 1 - 4 of 4. Page 1 of 1
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [4]

Current status

  • REL [4]

Sample type

  • Complex [4]
  • Protein [4]
  • Ligand [1]

Organism

  • Cupriavidus metallidurans [2]
  • Saccharomyces cerevisiae [2]
  • Homo sapiens [2]

EM Method

  • Single-particle [4]

Resolution

  • ≥ 2Å and < 3Å [1]
  • ≥ 3Å and < 4Å [3]

Model molecular weight

  • 50-100 kDa [2]
  • 250-500 kDa [2]

Release Date

  • 2022 [2]
  • 2021 [2]

Author by name

  • Stansfeld PJ [4]
  • Ashraf KU [2]
  • Carvalho P [2]
  • Clarke OB [2]
  • Corey RA [2]
  • Deme JC [2]
  • Dufrisne MB [2]
  • Erramilli SK [2]
  • Giacometti SI [2]
  • Graham CLB [2]
  • Herrera CM [2]
  • Kloss B [2]
  • Klug YA [2]
  • Kossiakoff AA [2]
  • Lea SM [2]
  • Loukeris M [2]
  • Mancia F [2]
  • Mcconville TH [2]
  • Nosol K [2]
  • Nygaard R [2]
  • Petrou VI [2]
  • Renne MF [2]
  • Roper DI [2]
  • Skorupinska-tudek K [2]
  • Swiezewska E [2]
  • Trent MS [2]
  • Uhlemann AC [2]
  • Vickery ON [2]
  • Zinkle AP [2]

Author by ORCID

  • Stansfeld PJ [4]
  • Trent MS [2]
  • Erramilli SK [2]
  • Lea SM [2]
  • Klug YA [2]
  • Nygaard R [2]
  • Ashraf KU [2]
  • Loukeris M [2]
  • Petrou VI [2]
  • Swiezewska E [2]
  • Graham CLB [2]
  • Giacometti SI [2]
  • Carvalho P [2]
  • Uhlemann AC [2]
  • Roper DI [2]
  • Kloss B [2]
  • Renne MF [2]
  • Corey RA [2]
  • Clarke OB [2]
  • Nosol K [2]
  • Mancia F [2]

Journal

  • NAT COMMUN [2]
  • NATURE [2]

Software

  • CRYOSPARC [2]

Microscope

  • FEI TITAN [2]
  • FEI TITAN KRIOS [2]

Electron Source

  • FIELD EMISSION GUN [4]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [3]
  • GATAN K2 SUMMIT 4K X 4K [1]

External links

  • PDB [4]
  • UniProt [4]
  • AlphaFold DB [2]
  • Gene Ontology [2]
  • InterPro [2]
  • PDBe-Kb [2]
  • Pfam [2]
  • ChEBI [1]
  • ChEMBL [1]
  • DrugBank [1]
  • EMPIAR [1]