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grant_code:"336492"

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Current Database

  • EMDB [4]

Current status

  • REL [4]

Sample type

  • Complex [4]
  • Protein [4]
  • Ligand [1]

Organism

  • Severe acute respiratory syndrome coronavirus [4]
  • Vicugna pacos [2]
  • Homo sapiens [1]

EM Method

  • Single-particle [4]

Resolution

  • ≥ 2Å and < 3Å [1]
  • ≥ 3Å and < 4Å [3]

Model molecular weight

  • 250-500 kDa [1]

Release Date

  • 2024 [2]
  • 2023 [2]

Author by name

  • Hannula L [4]
  • Hepojoki J [4]
  • Huiskonen JT [4]
  • Kant R [4]
  • Kareinen L [4]
  • Kipar A [4]
  • Kuivanen S [4]
  • Rissanen I [4]
  • Sironen T [4]
  • Strandin T [4]
  • Vapalahti O [4]
  • Bogacheva M [2]
  • Fagerlund R [2]
  • Haveri A [2]
  • Lasham J [2]
  • Levanov L [2]
  • Makela AR [2]
  • Maki S [2]
  • Naves RA [2]
  • Osterlund P [2]
  • Pasternack A [2]
  • Ritvos O [2]
  • Saksela K [2]
  • Salminen P [2]
  • Saviranta P [2]
  • Sharma V [2]
  • Ugurlu H [2]

Author by ORCID

  • Hepojoki J [4]
  • Kipar A [4]
  • Hannula L [4]
  • Huiskonen JT [4]
  • Sironen T [4]
  • Strandin T [4]
  • Vapalahti O [4]
  • Kant R [4]
  • Rissanen I [4]
  • Lasham J [2]
  • Bogacheva M [2]
  • Ritvos O [2]
  • Osterlund P [2]
  • Ugurlu H [2]
  • Pasternack A [2]
  • Sharma V [2]
  • Levanov L [2]
  • Saksela K [2]
  • Kareinen L [2]
  • Haveri A [2]
  • Salminen P [2]
  • Maki S [2]

Journal

  • MICROBIOL SPECTR [2]
  • NAT COMMUN [2]

Software

  • CRYOSPARC [4]

Microscope

  • FEI TITAN KRIOS [4]

Electron Source

  • FIELD EMISSION GUN [4]

Film or detector model

  • GATAN K2 QUANTUM 4K X 4K [4]

External links

  • Complex Portal [4]
  • PDBe-Kb [4]
  • UniProt [4]
  • ChEBI [1]
  • ChEMBL [1]
  • Gene Ontology [1]
  • InterPro [1]
  • PDB [1]
  • Pfam [1]
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Showing 1 - 4 of 4. Page 1 of 1
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EMD-19064
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3D View
CryoEM reconstruction of SARS-CoV-2 spike in complex with nanobody tri-TMH partially open conformation
Release date: Jan. 31, 2024
Resolution: 3.28 Å
EM Method: Single-particle

Hannula L, Kuivanen S, Lasham J, Kant R, Kareinen L, Bogacheva M, Strandin T, Sironen T, Hepojoki J, Sharma V, Saviranta P, Kipar A, Vapalahti O, Huiskonen JT, Rissanen I

Microbiol Spectr (2024) 12 pp. e0419922-e0419922 [ Pubmed: 38363137 DOI: doi:10.1128/spectrum.04199-22 ]

EMD-19068
Download Map
3D View
CryoEM reconstruction of SARS-CoV-2 Spike in complex with nanobody tri-TMH closed conformation
Release date: Jan. 31, 2024
Resolution: 3.48 Å
EM Method: Single-particle

Hannula L, Kuivanen S, Lasham J, Kant R, Kareinen L, Bogacheva M, Strandin T, Sironen T, Hepojoki J, Sharma V, Saviranta P, Kipar A, Vapalahti O, Huiskonen JT, Rissanen I

Microbiol Spectr (2024) 12 pp. e0419922-e0419922 [ Pubmed: 38363137 DOI: doi:10.1128/spectrum.04199-22 ]

EMD-16383
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3D View
Cryo-EM map of SARS-CoV-2 S-trimer 3 RBDs up in complex with neutralizing sherpabody TriSb92
Release date: April 19, 2023
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8c1v
Q-score: 0.366

Makela AR, Ugurlu H, Hannula L, Kant R, Salminen P, Fagerlund R, Maki S, Haveri A, Strandin T, Kareinen L, Hepojoki J, Kuivanen S, Levanov L, Pasternack A, Naves RA, Ritvos O, Osterlund P, Sironen T, Vapalahti O, Kipar A, Huiskonen JT, Rissanen I, Saksela K

Nat Commun (2023) 14 pp. 1637-1637 [ Pubmed: 36964125 DOI: doi:10.1038/s41467-023-37290-6 ]

EMD-16388
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3D View
CryoEM density of SARS-CoV-2 S spike 3 RBDs down
Release date: April 19, 2023
Resolution: 3.1 Å
EM Method: Single-particle

Makela AR, Ugurlu H, Hannula L, Kant R, Salminen P, Fagerlund R, Maki S, Haveri A, Strandin T, Kareinen L, Hepojoki J, Kuivanen S, Levanov L, Pasternack A, Naves RA, Ritvos O, Osterlund P, Sironen T, Vapalahti O, Kipar A, Huiskonen JT, Rissanen I, Saksela K

Nat Commun (2023) 14 pp. 1637-1637 [ Pubmed: 36964125 DOI: doi:10.1038/s41467-023-37290-6 ]

Sort by: Download
Showing 1 - 4 of 4. Page 1 of 1
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [4]

Current status

  • REL [4]

Sample type

  • Complex [4]
  • Protein [4]
  • Ligand [1]

Organism

  • Severe acute respiratory syndrome coronavirus [4]
  • Vicugna pacos [2]
  • Homo sapiens [1]

EM Method

  • Single-particle [4]

Resolution

  • ≥ 2Å and < 3Å [1]
  • ≥ 3Å and < 4Å [3]

Model molecular weight

  • 250-500 kDa [1]

Release Date

  • 2024 [2]
  • 2023 [2]

Author by name

  • Hannula L [4]
  • Hepojoki J [4]
  • Huiskonen JT [4]
  • Kant R [4]
  • Kareinen L [4]
  • Kipar A [4]
  • Kuivanen S [4]
  • Rissanen I [4]
  • Sironen T [4]
  • Strandin T [4]
  • Vapalahti O [4]
  • Bogacheva M [2]
  • Fagerlund R [2]
  • Haveri A [2]
  • Lasham J [2]
  • Levanov L [2]
  • Makela AR [2]
  • Maki S [2]
  • Naves RA [2]
  • Osterlund P [2]
  • Pasternack A [2]
  • Ritvos O [2]
  • Saksela K [2]
  • Salminen P [2]
  • Saviranta P [2]
  • Sharma V [2]
  • Ugurlu H [2]

Author by ORCID

  • Hepojoki J [4]
  • Kipar A [4]
  • Hannula L [4]
  • Huiskonen JT [4]
  • Sironen T [4]
  • Strandin T [4]
  • Vapalahti O [4]
  • Kant R [4]
  • Rissanen I [4]
  • Lasham J [2]
  • Bogacheva M [2]
  • Ritvos O [2]
  • Osterlund P [2]
  • Ugurlu H [2]
  • Pasternack A [2]
  • Sharma V [2]
  • Levanov L [2]
  • Saksela K [2]
  • Kareinen L [2]
  • Haveri A [2]
  • Salminen P [2]
  • Maki S [2]

Journal

  • MICROBIOL SPECTR [2]
  • NAT COMMUN [2]

Software

  • CRYOSPARC [4]

Microscope

  • FEI TITAN KRIOS [4]

Electron Source

  • FIELD EMISSION GUN [4]

Film or detector model

  • GATAN K2 QUANTUM 4K X 4K [4]

External links

  • Complex Portal [4]
  • PDBe-Kb [4]
  • UniProt [4]
  • ChEBI [1]
  • ChEMBL [1]
  • Gene Ontology [1]
  • InterPro [1]
  • PDB [1]
  • Pfam [1]