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grant_code:"32100963"

Filter By

Current Database

  • EMDB [21]

Current status

  • REL [21]

Sample type

  • Complex [21]
  • Protein [21]
  • Ligand [15]

Organism

  • Homo sapiens [14]
  • Oryctolagus cuniculus [7]
  • Zika virus [5]
  • Lama glama [5]
  • Oplophorus gracilirostris [4]

EM Method

  • Single-particle [21]

Resolution

  • ≥ 2Å and < 3Å [7]
  • ≥ 3Å and < 4Å [12]
  • ≥ 4Å and < 5Å [2]

Model molecular weight

  • 50-100 kDa [5]
  • 100-250 kDa [7]
  • 250-500 kDa [2]
  • 2-5 MDa [7]

Release Date

  • 2025 [10]
  • 2024 [5]
  • 2023 [6]

Author by name

  • Hu H [21]
  • Chen Q [18]
  • Jiao H [14]
  • Pan Q [14]
  • Hu HL [9]
  • Jiao HZ [9]
  • Zhang W [8]
  • Liu C [7]
  • Wei R [7]
  • Xu Y [7]
  • Yin CC [7]
  • Zhang L [7]
  • Chiang YC [6]
  • Pang B [6]
  • Ren R [6]
  • Gao M [5]
  • Wen Y [5]
  • Xing X [5]
  • Yu J [5]
  • Yu L [5]
  • Zhao W [5]
  • Liu A [4]
  • Wang X [4]
  • An J [3]
  • Fang X [3]
  • Huang Z [3]
  • Meng Q [3]
  • Qi P [3]
  • Qian T [3]
  • Sang X [3]
  • Zhou J [3]

Author by ORCID

  • Hu H [16]
  • Yin CC [7]
  • Liu C [7]
  • Liu C [7]
  • Pang B [6]
  • Ren R [6]
  • Chiang YC [4]
  • Wang X [4]
  • Sang X [3]
  • Xu Y [3]

Journal

  • NAT COMMUN [7]
  • HLIFE [5]
  • NAT STRUCT MOL BIOL [4]
  • PNAS [3]
  • CELL DISCOV [2]

Software

  • GCTF [4]

Microscope

  • FEI TITAN KRIOS [16]
  • TFS KRIOS [5]

Electron Source

  • FIELD EMISSION GUN [21]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [9]
  • FEI FALCON III 4K X 4K [6]
  • GATAN K3 6K X 4K [5]
  • GATAN K2 SUMMIT 4K X 4K [1]

External links

  • PDB [21]
  • UniProt [21]
  • PDBe-Kb [18]
  • Gene Ontology [16]
  • InterPro [16]
  • Pfam [16]
  • ChEBI [15]
  • DrugBank [15]
  • AlphaFold DB [14]
  • ChEMBL [13]
  • Complex Portal [7]
Sort by: Download
Showing 1 - 10 of 21. Page 1 of 3
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EMD-38042
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3D View
Cryo-EM structure of Ryanodine receptor 1 EGTA
Release date: March 5, 2025
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 8x48
Q-score: 0.339

Wei R, Chen Q, Zhang L, Liu C, Liu C, Yin CC, Hu H

Nat Commun (2025) 16 pp. 1936-1936 [ DOI: doi:10.1038/s41467-025-57074-4 Pubmed: 39994184 ]

EMD-38043
Download Map
3D View
Cryo-EM structure of Ryanodine receptor 1 100 nM Ca2
Release date: March 5, 2025
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8x49
Q-score: 0.39

Wei R, Chen Q, Zhang L, Liu C, Liu C, Yin CC, Hu H

Nat Commun (2025) 16 pp. 1936-1936 [ DOI: doi:10.1038/s41467-025-57074-4 Pubmed: 39994184 ]

EMD-38044
Download Map
3D View
Cryo-EM structure of Ryanodine receptor 1 TM helix S0,100 nM Ca2 , closed state
Release date: March 5, 2025
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 8x4a
Q-score: 0.35

Wei R, Chen Q, Zhang L, Liu C, Liu C, Yin CC, Hu H

Nat Commun (2025) 16 pp. 1936-1936 [ DOI: doi:10.1038/s41467-025-57074-4 Pubmed: 39994184 ]

EMD-38045
Download Map
3D View
Cryo-EM structure of Ryanodine receptor 1 TM helix S0,100 nM Ca2 , open state
Release date: March 5, 2025
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 8x4b
Q-score: 0.26

Wei R, Chen Q, Zhang L, Liu C, Liu C, Yin CC, Hu H

Nat Commun (2025) 16 pp. 1936-1936 [ DOI: doi:10.1038/s41467-025-57074-4 Pubmed: 39994184 ]

EMD-38046
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3D View
Cryo-EM structure of Ryanodine receptor 1 20 uM Ca2 , 2 mM ATP
Release date: March 5, 2025
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 8x4c
Q-score: 0.327

Wei R, Chen Q, Zhang L, Liu C, Liu C, Yin CC, Hu H

Nat Commun (2025) 16 pp. 1936-1936 [ DOI: doi:10.1038/s41467-025-57074-4 Pubmed: 39994184 ]

EMD-38047
Download Map
3D View
Cryo-EM structure of Ryanodine receptor 1 TM helix S0,20 uM Ca2 , 2 mM ATP
Release date: March 5, 2025
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 8x4d
Q-score: 0.359

Wei R, Chen Q, Zhang L, Liu C, Liu C, Yin CC, Hu H

Nat Commun (2025) 16 pp. 1936-1936 [ DOI: doi:10.1038/s41467-025-57074-4 Pubmed: 39994184 ]

EMD-38048
Download Map
3D View
Cryo-EM structure of Ryanodine receptor 1 TM helix S0, 5 mM Ca2
Release date: March 5, 2025
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8x4e
Q-score: 0.385

Wei R, Chen Q, Zhang L, Liu C, Liu C, Yin CC, Hu H

Nat Commun (2025) 16 pp. 1936-1936 [ DOI: doi:10.1038/s41467-025-57074-4 Pubmed: 39994184 ]

EMD-60348
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3D View
Cryo-EM strucutre of CXCR4 complexed with antagonist HF51116
Release date: Feb. 26, 2025
Resolution: 3.01 Å
EM Method: Single-particle
Fitted PDBs: 8zpl
Q-score: 0.516

Sang X, Jiao H, Meng Q, Fang X, Pan Q, Zhou J, Qian T, Zhang W, Xu Y, An J, Huang Z, Hu H

PNAS (2025) 122 pp. e2425795122-e2425795122 [ Pubmed: 40063796 DOI: doi:10.1073/pnas.2425795122 ]

EMD-60349
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3D View
Cryo-EM strucutre of CXCR4 complexed with antagonist AMD070
Release date: Feb. 26, 2025
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8zpm
Q-score: 0.476

Sang X, Jiao H, Meng Q, Fang X, Pan Q, Zhou J, Qian T, Zhang W, Xu Y, An J, Huang Z, Hu H

PNAS (2025) 122 pp. e2425795122-e2425795122 [ Pubmed: 40063796 DOI: doi:10.1073/pnas.2425795122 ]

EMD-60350
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3D View
Cryo-EM strucutre of CXCR4 complexed with antagonist AMD3100
Release date: Feb. 26, 2025
Resolution: 3.31 Å
EM Method: Single-particle
Fitted PDBs: 8zpn
Q-score: 0.458

Sang X, Jiao H, Meng Q, Fang X, Pan Q, Zhou J, Qian T, Zhang W, Xu Y, An J, Huang Z, Hu H

PNAS (2025) 122 pp. e2425795122-e2425795122 [ Pubmed: 40063796 DOI: doi:10.1073/pnas.2425795122 ]

Sort by: Download
Showing 1 - 10 of 21. Page 1 of 3
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [21]

Current status

  • REL [21]

Sample type

  • Complex [21]
  • Protein [21]
  • Ligand [15]

Organism

  • Homo sapiens [14]
  • Oryctolagus cuniculus [7]
  • Zika virus [5]
  • Lama glama [5]
  • Oplophorus gracilirostris [4]

EM Method

  • Single-particle [21]

Resolution

  • ≥ 2Å and < 3Å [7]
  • ≥ 3Å and < 4Å [12]
  • ≥ 4Å and < 5Å [2]

Model molecular weight

  • 50-100 kDa [5]
  • 100-250 kDa [7]
  • 250-500 kDa [2]
  • 2-5 MDa [7]

Release Date

  • 2025 [10]
  • 2024 [5]
  • 2023 [6]

Author by name

  • Hu H [21]
  • Chen Q [18]
  • Jiao H [14]
  • Pan Q [14]
  • Hu HL [9]
  • Jiao HZ [9]
  • Zhang W [8]
  • Liu C [7]
  • Wei R [7]
  • Xu Y [7]
  • Yin CC [7]
  • Zhang L [7]
  • Chiang YC [6]
  • Pang B [6]
  • Ren R [6]
  • Gao M [5]
  • Wen Y [5]
  • Xing X [5]
  • Yu J [5]
  • Yu L [5]
  • Zhao W [5]
  • Liu A [4]
  • Wang X [4]
  • An J [3]
  • Fang X [3]
  • Huang Z [3]
  • Meng Q [3]
  • Qi P [3]
  • Qian T [3]
  • Sang X [3]
  • Zhou J [3]

Author by ORCID

  • Hu H [16]
  • Yin CC [7]
  • Liu C [7]
  • Liu C [7]
  • Pang B [6]
  • Ren R [6]
  • Chiang YC [4]
  • Wang X [4]
  • Sang X [3]
  • Xu Y [3]

Journal

  • NAT COMMUN [7]
  • HLIFE [5]
  • NAT STRUCT MOL BIOL [4]
  • PNAS [3]
  • CELL DISCOV [2]

Software

  • GCTF [4]

Microscope

  • FEI TITAN KRIOS [16]
  • TFS KRIOS [5]

Electron Source

  • FIELD EMISSION GUN [21]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [9]
  • FEI FALCON III 4K X 4K [6]
  • GATAN K3 6K X 4K [5]
  • GATAN K2 SUMMIT 4K X 4K [1]

External links

  • PDB [21]
  • UniProt [21]
  • PDBe-Kb [18]
  • Gene Ontology [16]
  • InterPro [16]
  • Pfam [16]
  • ChEBI [15]
  • DrugBank [15]
  • AlphaFold DB [14]
  • ChEMBL [13]
  • Complex Portal [7]