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grant_code:"2020YFA0909200"

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Current Database

  • EMDB [11]

Current status

  • REL [11]

Sample type

  • Complex [11]
  • Protein [11]
  • Ligand [10]
  • DNA [5]

Organism

  • Synthetic construct [10]
  • (no species) [4]
  • Clostridioides difficile [2]
  • (no species) [1]
  • Burkholderia cenocepacia [1]
  • Homo sapiens [1]

EM Method

  • Single-particle [11]

Resolution

  • ≥ 2Å and < 3Å [4]
  • ≥ 3Å and < 4Å [7]

Model molecular weight

  • 50-100 kDa [1]
  • 100-250 kDa [5]
  • 250-500 kDa [2]

Release Date

  • 2025 [8]
  • 2024 [3]

Author by name

  • Lu P [11]
  • Lu PL [11]
  • Li H [8]
  • Lv X [7]
  • Lv XC [7]
  • Sun K [6]
  • Zhang L [6]
  • Ji K [5]
  • Jiang M [5]
  • Li YX [5]
  • Liu X [5]
  • Mi L [5]
  • Wan ZL [5]
  • Wang Y [5]
  • Xu Z [5]
  • Yao Y [5]
  • Zhang K [5]
  • Zhuang X [5]
  • Chu Z [3]
  • Gamal El-Din Tm [3]
  • Huang J [3]
  • Jin X [3]
  • Li B [3]
  • Li X [3]
  • Qian C [3]
  • Shao Q [3]
  • Sun S [3]
  • Wang J [3]
  • Wu K [3]
  • Xiong H [3]
  • Yang F [3]
  • Zhou C [3]
  • Zhu A [3]
  • Luo J [2]
  • Tao L [2]
  • Yang Q [2]
  • Zhang Y [2]
  • Guo R [1]
  • Hu Q [1]
  • Huang G [1]
  • Liang M [1]
  • Liang MF [1]
  • Ma D [1]
  • Shi J [1]
  • Wei Y [1]
  • Zhu J [1]
  • Zhu JY [1]

Author by ORCID

  • Lu P [8]
  • Lv X [7]
  • Wang Y [5]
  • Jiang M [5]
  • Li YX [5]
  • Mi L [5]
  • Wan ZL [5]
  • Zhang Y [2]
  • Tao L [2]
  • Luo J [2]
  • Liang M [1]
  • Hu Q [1]
  • Zhu J [1]
  • Ma D [1]
  • Guo R [1]
  • Sun K [1]

Journal

  • NAT STRUCT MOL BIOL [5]
  • CELL [3]
  • NAT COMMUN [2]
  • NATURE [1]

Software

  • CRYOSPARC [1]

Microscope

  • TFS KRIOS [9]
  • FEI TITAN KRIOS [2]

Electron Source

  • FIELD EMISSION GUN [11]

Film or detector model

  • GATAN K3 6K X 4K [7]
  • FEI FALCON IV 4K X 4K [4]

External links

  • PDB [8]
  • ChEBI [7]
  • ChEMBL [7]
  • DrugBank [7]
  • AlphaFold DB [3]
  • PDBe-Kb [3]
  • UniProt [3]
  • Gene Ontology [2]
  • InterPro [2]
  • Pfam [2]
  • Complex Portal [1]
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Showing 1 - 10 of 11. Page 1 of 2
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EMD-62995
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3D View
Inactive TOD6 with AC DNA substrate
Release date: Nov. 19, 2025
Resolution: 3.18 Å
EM Method: Single-particle
Fitted PDBs: 9lcx
Q-score: 0.541

Mi L, Li YX, Lv X, Wan ZL, Liu X, Zhang K, Li H, Yao Y, Zhang L, Xu Z, Zhuang X, Ji K, Jiang M, Wang Y, Lu P

Nat Struct Mol Biol (2025) 32 pp. 2575-2586 [ DOI: doi:10.1038/s41594-025-01714-2 Pubmed: 41249818 ]

EMD-62996
Download Map
3D View
Inactivate TOD6 with TC DNA substrate
Release date: Nov. 19, 2025
Resolution: 3.02 Å
EM Method: Single-particle
Fitted PDBs: 9lcy
Q-score: 0.544

Mi L, Li YX, Lv X, Wan ZL, Liu X, Zhang K, Li H, Yao Y, Zhang L, Xu Z, Zhuang X, Ji K, Jiang M, Wang Y, Lu P

Nat Struct Mol Biol (2025) 32 pp. 2575-2586 [ DOI: doi:10.1038/s41594-025-01714-2 Pubmed: 41249818 ]

EMD-62997
Download Map
3D View
Inactivate TOD6 with GC DNA substrate
Release date: Nov. 19, 2025
Resolution: 2.93 Å
EM Method: Single-particle
Fitted PDBs: 9lcz
Q-score: 0.558

Mi L, Li YX, Lv X, Wan ZL, Liu X, Zhang K, Li H, Yao Y, Zhang L, Xu Z, Zhuang X, Ji K, Jiang M, Wang Y, Lu P

Nat Struct Mol Biol (2025) 32 pp. 2575-2586 [ DOI: doi:10.1038/s41594-025-01714-2 Pubmed: 41249818 ]

EMD-62998
Download Map
3D View
Inactivate TOD6 with CC DNA substrate
Release date: Nov. 19, 2025
Resolution: 3.17 Å
EM Method: Single-particle
Fitted PDBs: 9ld0
Q-score: 0.457

Mi L, Li YX, Lv X, Wan ZL, Liu X, Zhang K, Li H, Yao Y, Zhang L, Xu Z, Zhuang X, Ji K, Jiang M, Wang Y, Lu P

Nat Struct Mol Biol (2025) 32 pp. 2575-2586 [ DOI: doi:10.1038/s41594-025-01714-2 Pubmed: 41249818 ]

EMD-62999
Download Map
3D View
Inactivate TOD4 with TC DNA substrate
Release date: Nov. 19, 2025
Resolution: 2.64 Å
EM Method: Single-particle
Fitted PDBs: 9ld1
Q-score: 0.48

Mi L, Li YX, Lv X, Wan ZL, Liu X, Zhang K, Li H, Yao Y, Zhang L, Xu Z, Zhuang X, Ji K, Jiang M, Wang Y, Lu P

Nat Struct Mol Biol (2025) 32 pp. 2575-2586 [ DOI: doi:10.1038/s41594-025-01714-2 Pubmed: 41249818 ]

EMD-63538
Download Map
3D View
Cryo-EM structure of dVGAC complexed with iodide
Release date: Oct. 29, 2025
Resolution: 3.72 Å
EM Method: Single-particle
Fitted PDBs: 9m05
Q-score: 0.433

Zhou C, Li H, Wang J, Qian C, Xiong H, Chu Z, Shao Q, Li X, Sun S, Sun K, Zhu A, Wang J, Jin X, Yang F, Gamal El-Din TM, Li B, Huang J, Wu K, Lu P

Cell (2025) 188 pp. 7495- [ DOI: doi:10.1016/j.cell.2025.09.023 Pubmed: 41106381 ]

EMD-39496
Composite map
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3D View
Cryo-EM structure of a de novo designed transmembrane protein tmZC8-BTB
Release date: Sept. 24, 2025
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8yq5
Q-score: 0.464

Zhou C, Li H, Wang J, Qian C, Xiong H, Chu Z, Shao Q, Li X, Sun S, Sun K, Zhu A, Wang J, Jin X, Yang F, Gamal El-Din TM, Li B, Huang J, Wu K, Lu P

Cell (2025) 188 pp. 7495- [ DOI: doi:10.1016/j.cell.2025.09.023 Pubmed: 41106381 ]

EMD-39497
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3D View
Cryo-EM structure of a de novo designed voltage-gated anion channel dVGAC
Release date: Sept. 24, 2025
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8yq6
Q-score: 0.544

Zhou C, Li H, Wang J, Qian C, Xiong H, Chu Z, Shao Q, Li X, Sun S, Sun K, Zhu A, Wang J, Jin X, Yang F, Gamal El-Din TM, Li B, Huang J, Wu K, Lu P

Cell (2025) 188 pp. 7495- [ DOI: doi:10.1016/j.cell.2025.09.023 Pubmed: 41106381 ]

EMD-60929
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3D View
cryo-EM structure of a tmFAP
Release date: Nov. 20, 2024
Resolution: 2.74 Å
EM Method: Single-particle
Fitted PDBs: 9ivk
Q-score: 0.509

Zhu J, Liang M, Sun K, Wei Y, Guo R, Zhang L, Shi J, Ma D, Hu Q, Huang G, Lu P

Nature (2025) 640 pp. 249-257 [ DOI: doi:10.1038/s41586-025-08598-8 Pubmed: 39972138 ]

EMD-39072
Download Map
3D View
TcdB1 in complex with mini-binder
Release date: Aug. 28, 2024
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8y9b
Q-score: 0.542

Lv X, Zhang Y, Sun K, Yang Q, Luo J, Tao L, Lu P

Nat Commun (2024) 15 pp. 8521-8521 [ Pubmed: 39358329 DOI: doi:10.1038/s41467-024-52582-1 ]

Sort by: Download
Showing 1 - 10 of 11. Page 1 of 2
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [11]

Current status

  • REL [11]

Sample type

  • Complex [11]
  • Protein [11]
  • Ligand [10]
  • DNA [5]

Organism

  • Synthetic construct [10]
  • (no species) [4]
  • Clostridioides difficile [2]
  • (no species) [1]
  • Burkholderia cenocepacia [1]
  • Homo sapiens [1]

EM Method

  • Single-particle [11]

Resolution

  • ≥ 2Å and < 3Å [4]
  • ≥ 3Å and < 4Å [7]

Model molecular weight

  • 50-100 kDa [1]
  • 100-250 kDa [5]
  • 250-500 kDa [2]

Release Date

  • 2025 [8]
  • 2024 [3]

Author by name

  • Lu P [11]
  • Lu PL [11]
  • Li H [8]
  • Lv X [7]
  • Lv XC [7]
  • Sun K [6]
  • Zhang L [6]
  • Ji K [5]
  • Jiang M [5]
  • Li YX [5]
  • Liu X [5]
  • Mi L [5]
  • Wan ZL [5]
  • Wang Y [5]
  • Xu Z [5]
  • Yao Y [5]
  • Zhang K [5]
  • Zhuang X [5]
  • Chu Z [3]
  • Gamal El-Din Tm [3]
  • Huang J [3]
  • Jin X [3]
  • Li B [3]
  • Li X [3]
  • Qian C [3]
  • Shao Q [3]
  • Sun S [3]
  • Wang J [3]
  • Wu K [3]
  • Xiong H [3]
  • Yang F [3]
  • Zhou C [3]
  • Zhu A [3]
  • Luo J [2]
  • Tao L [2]
  • Yang Q [2]
  • Zhang Y [2]
  • Guo R [1]
  • Hu Q [1]
  • Huang G [1]
  • Liang M [1]
  • Liang MF [1]
  • Ma D [1]
  • Shi J [1]
  • Wei Y [1]
  • Zhu J [1]
  • Zhu JY [1]

Author by ORCID

  • Lu P [8]
  • Lv X [7]
  • Wang Y [5]
  • Jiang M [5]
  • Li YX [5]
  • Mi L [5]
  • Wan ZL [5]
  • Zhang Y [2]
  • Tao L [2]
  • Luo J [2]
  • Liang M [1]
  • Hu Q [1]
  • Zhu J [1]
  • Ma D [1]
  • Guo R [1]
  • Sun K [1]

Journal

  • NAT STRUCT MOL BIOL [5]
  • CELL [3]
  • NAT COMMUN [2]
  • NATURE [1]

Software

  • CRYOSPARC [1]

Microscope

  • TFS KRIOS [9]
  • FEI TITAN KRIOS [2]

Electron Source

  • FIELD EMISSION GUN [11]

Film or detector model

  • GATAN K3 6K X 4K [7]
  • FEI FALCON IV 4K X 4K [4]

External links

  • PDB [8]
  • ChEBI [7]
  • ChEMBL [7]
  • DrugBank [7]
  • AlphaFold DB [3]
  • PDBe-Kb [3]
  • UniProt [3]
  • Gene Ontology [2]
  • InterPro [2]
  • Pfam [2]
  • Complex Portal [1]