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grant_code:"109718-63-RKNT"

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Current Database

  • EMDB [8]

Current status

  • REL [8]

Sample type

  • Complex [8]
  • Ligand [8]
  • Protein [8]

Organism

  • Human immunodeficiency virus 1 [8]
  • Homo sapiens [8]

EM Method

  • Single-particle [8]

Resolution

  • ≥ 3Å and < 4Å [5]
  • ≥ 4Å and < 5Å [2]
  • ≥ 5Å and < 6Å [1]

Model molecular weight

  • 250-500 kDa [6]
  • 500-1000 kDa [2]

Release Date

  • 2020 [6]
  • 2019 [2]

Author by name

  • Ozorowski G [8]
  • Torres JL [8]
  • Ward AB [8]
  • Forli S [6]
  • Santos-martins D [6]
  • Copps J [2]
  • Cottrell CA [2]
  • Kumar S [2]
  • Moore JP [2]
  • Sanders RW [2]
  • Sarkar A [2]
  • Wilson IA [2]
  • Wu NC [2]
  • Yuan M [2]
  • De Val N [2]
  • Van Gils Mj [2]

Author by ORCID

  • Torres JL [8]
  • Ward AB [6]
  • Forli S [6]
  • Sarkar A [2]
  • Yuan M [2]
  • Cottrell CA [2]
  • Wu NC [2]
  • Kumar S [2]
  • Van Gils Mj [2]

Journal

  • BIORXIV [6]
  • CELL REP [6]
  • CELL HOST MICROBE [2]

Software

  • CRYOSPARC [5]
  • RELION [3]

Microscope

  • FEI TITAN KRIOS [6]
  • FEI TALOS ARCTICA [2]

Electron Source

  • FIELD EMISSION GUN [8]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [8]

External links

  • AlphaFold DB [8]
  • ChEBI [8]
  • ChEMBL [8]
  • PDB [8]
  • PDBe-Kb [8]
  • UniProt [8]
  • Gene Ontology [6]
  • InterPro [6]
  • Pfam [6]
  • Complex Portal [2]
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EMD-20150
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3D View
CD4- and 17-bound HIV-1 Env B41 SOSIP in complex with small molecule GO35
Release date: Oct. 21, 2020
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 6opn
Q-score: 0.386

Ozorowski G, Torres JL, Santos-Martins D, Forli S, Ward AB

Cell Rep (2020) 33 pp. 108428-108428 [ Pubmed: 33238117 DOI: doi:10.1016/j.celrep.2020.108428 ]

EMD-20151
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3D View
C3 symmetry reconstruction of CD4- and 17-bound B41 HIV-1 Env SOSIP in complex with DDM
Release date: Oct. 21, 2020
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 6opo
Q-score: 0.448

Ozorowski G, Torres JL, Santos-Martins D, Forli S, Ward AB

Cell Rep (2020) 33 pp. 108428-108428 [ Pubmed: 33238117 DOI: doi:10.1016/j.celrep.2020.108428 ]

EMD-20152
Download Map
3D View
Asymmetric reconstruction of CD4- and 17-bound B41 HIV-1 Env SOSIP in complex with DDM
Release date: Oct. 21, 2020
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 6opp
Q-score: 0.411

Ozorowski G, Torres JL, Santos-Martins D, Forli S, Ward AB

Cell Rep (2020) 33 pp. 108428-108428 [ Pubmed: 33238117 DOI: doi:10.1016/j.celrep.2020.108428 ]

EMD-20153
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3D View
Reconstruction of class 1 of CD4- and 17-bound B41 HIV-1 Env SOSIP incubated with LMNG and small molecule GO27
Release date: Oct. 21, 2020
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 6opq
Q-score: 0.363

Ozorowski G, Torres JL, Santos-Martins D, Forli S, Ward AB

Cell Rep (2020) 33 pp. 108428-108428 [ Pubmed: 33238117 DOI: doi:10.1016/j.celrep.2020.108428 ]

EMD-22048
Download Map
3D View
C3 symmetric reconstruction of CD4- and 17-bound B41 HIV-1 Env SOSIP in complex with small molecule GO52
Release date: Oct. 21, 2020
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 6x5b
Q-score: 0.396

Ozorowski G, Torres JL, Santos-Martins D, Forli S, Ward AB

Cell Rep (2020) 33 pp. 108428-108428 [ Pubmed: 33238117 DOI: doi:10.1016/j.celrep.2020.108428 ]

EMD-22049
Download Map
3D View
Asymmetric reconstruction of CD4- and 17b-bound B41 HIV-1 Env SOSIP in complex with small molecule GO52
Release date: Oct. 21, 2020
Resolution: 4.04 Å
EM Method: Single-particle
Fitted PDBs: 6x5c
Q-score: 0.341

Ozorowski G, Torres JL, Santos-Martins D, Forli S, Ward AB

Cell Rep (2020) 33 pp. 108428-108428 [ Pubmed: 33238117 DOI: doi:10.1016/j.celrep.2020.108428 ]

EMD-0433
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3D View
AMC011 v4.2 SOSIP Env trimer in complex with fusion peptide targeting antibody ACS202 fragment antigen binding
Release date: June 19, 2019
Resolution: 5.2 Å
EM Method: Single-particle
Fitted PDBs: 6nc2
Q-score: 0.216

Yuan M, Cottrell CA, Ozorowski G, van Gils MJ, Kumar S, Wu NC, Sarkar A, Torres JL, de Val N, Copps J, Moore JP, Sanders RW, Ward AB, Wilson IA

Cell Host Microbe (2019) 25 pp. 873- [ Pubmed: 31194940 DOI: doi:10.1016/j.chom.2019.04.011 ]

EMD-0434
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3D View
AMC011 v4.2 SOSIP Env trimer in complex with fusion peptide targeting antibody VRC34 fragment antigen binding
Release date: June 19, 2019
Resolution: 4.5 Å
EM Method: Single-particle
Fitted PDBs: 6nc3
Q-score: 0.255

Yuan M, Cottrell CA, Ozorowski G, van Gils MJ, Kumar S, Wu NC, Sarkar A, Torres JL, de Val N, Copps J, Moore JP, Sanders RW, Ward AB, Wilson IA

Cell Host Microbe (2019) 25 pp. 873- [ Pubmed: 31194940 DOI: doi:10.1016/j.chom.2019.04.011 ]

Sort by: Download
Showing 1 - 8 of 8. Page 1 of 1
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [8]

Current status

  • REL [8]

Sample type

  • Complex [8]
  • Ligand [8]
  • Protein [8]

Organism

  • Human immunodeficiency virus 1 [8]
  • Homo sapiens [8]

EM Method

  • Single-particle [8]

Resolution

  • ≥ 3Å and < 4Å [5]
  • ≥ 4Å and < 5Å [2]
  • ≥ 5Å and < 6Å [1]

Model molecular weight

  • 250-500 kDa [6]
  • 500-1000 kDa [2]

Release Date

  • 2020 [6]
  • 2019 [2]

Author by name

  • Ozorowski G [8]
  • Torres JL [8]
  • Ward AB [8]
  • Forli S [6]
  • Santos-martins D [6]
  • Copps J [2]
  • Cottrell CA [2]
  • Kumar S [2]
  • Moore JP [2]
  • Sanders RW [2]
  • Sarkar A [2]
  • Wilson IA [2]
  • Wu NC [2]
  • Yuan M [2]
  • De Val N [2]
  • Van Gils Mj [2]

Author by ORCID

  • Torres JL [8]
  • Ward AB [6]
  • Forli S [6]
  • Sarkar A [2]
  • Yuan M [2]
  • Cottrell CA [2]
  • Wu NC [2]
  • Kumar S [2]
  • Van Gils Mj [2]

Journal

  • BIORXIV [6]
  • CELL REP [6]
  • CELL HOST MICROBE [2]

Software

  • CRYOSPARC [5]
  • RELION [3]

Microscope

  • FEI TITAN KRIOS [6]
  • FEI TALOS ARCTICA [2]

Electron Source

  • FIELD EMISSION GUN [8]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [8]

External links

  • AlphaFold DB [8]
  • ChEBI [8]
  • ChEMBL [8]
  • PDB [8]
  • PDBe-Kb [8]
  • UniProt [8]
  • Gene Ontology [6]
  • InterPro [6]
  • Pfam [6]
  • Complex Portal [2]