Happy Holidays and New year from the EMDB! Please be advised that the EMDB team will be operating at reduced capacity between December 15th - January 12th. With this in mind we would ask that you be prepared for longer reply times through both our helpdesk system and the OneDep deposition system. well done on a productive 2025, wishing you all the best and we will see you in 2026!

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Filter By

Current Database

  • EMDB [35]

Current status

  • REL [35]

Sample type

  • Protein [27]
  • Complex [21]
  • Virus [14]
  • Ligand [10]
  • RNA [3]
  • DNA [1]

Organism

  • Homo sapiens [14]
  • Rotavirus a [8]
  • Lama glama [8]
  • Influenza a virus [5]
  • Spondweni virus [4]
  • Influenza a virus [4]
  • Mus musculus [1]
  • Rabies lyssavirus [1]
  • Dengue virus [1]
  • Rabies lyssavirus [1]
  • Aeropyrum pernix bacilliform virus 1 [1]
  • Foot-and-mouth disease virus [1]
  • Schizosaccharomyces pombe [1]
  • Aeropyrum pernix bacilliform virus 1 [1]
  • Bos taurus [1]

EM Method

  • Single-particle [28]
  • Subtomogram averaging [7]

Resolution

  • ≥ 2Å and < 3Å [12]
  • ≥ 3Å and < 4Å [13]
  • ≥ 4Å and < 5Å [4]
  • ≥ 6Å and < 8Å [3]
  • ≥ 8Å and < 12Å [2]
  • ≥ 20Å and < 30Å [1]

Model molecular weight

  • 50-100 kDa [2]
  • 100-250 kDa [2]
  • 250-500 kDa [7]
  • 500-1000 kDa [3]
  • 1-2 MDa [3]
  • 5-10 MDa [1]
  • > 10 MDa [3]

Release Date

  • 2025 [2]
  • 2024 [18]
  • 2023 [8]
  • 2022 [1]
  • 2021 [5]
  • 2017 [1]

Author by name

  • Carrique L [15]
  • Grimes JM [15]
  • Keown JR [12]
  • Duyvesteyn HME [10]
  • Owens RJ [10]
  • Abdelkarim S [9]
  • Gandhi NS [9]
  • Mycroft-west CJ [9]
  • Skidmore MA [9]
  • Stuart DI [9]
  • Wu L [9]
  • Boyce M [8]
  • Burt A [8]
  • Chaban Y [8]
  • Forsberg BO [8]
  • Gilchrist JB [8]
  • Howe A [8]
  • Mosalaganti S [8]
  • Radecke J [8]
  • Shah PNM [8]
  • Sutton G [8]
  • Wan W [8]
  • Fodor E [7]
  • Barclay WS [5]
  • Dejnirattisai W [5]
  • Fan H [5]
  • Ho SF [5]
  • Ilca SL [5]
  • Karia D [5]
  • Kotecha A [5]
  • Martin IS [5]
  • Mongkolsapaya J [5]
  • Renner M [5]
  • Screaton GR [5]
  • Sheppard CM [5]
  • Staller E [5]
  • Swann OC [5]
  • Baazaoui A [2]
  • Chen K [2]
  • Fodor M [2]
  • Keown J [2]
  • Rep A [2]
  • Sebesta M [2]
  • Stefl R [2]
  • Wang F [2]
  • Augusto G [1]
  • Aydin E [1]
  • Berg A [1]
  • Bonnet-Di Placido M [1]
  • Bowden TA [1]
  • Charleston B [1]
  • Clarke JD [1]
  • Douglas AD [1]
  • English S [1]
  • Fedosyuk S [1]
  • Fournier M [1]
  • Fry EE [1]
  • Gillum A [1]
  • Hammond JA [1]
  • Haselon AS [1]
  • Hassanein SS [1]
  • Hay AL [1]
  • Huiskonen JT [1]
  • Humphreys KV [1]
  • Kecman T [1]
  • Kilchert C [1]
  • Krupovic M [1]
  • Kus K [1]
  • Latisenko U [1]
  • Liu Y [1]
  • Lucas-staat S [1]
  • Mochizuki T [1]
  • Ng WM [1]
  • Perez-martin E [1]
  • Phillips SEV [1]
  • Porta C [1]
  • Prangishvili D [1]
  • Ptchelkine D [1]
  • Ren J [1]
  • Segireddy RR [1]
  • Shah PN [1]
  • Thorley L [1]
  • Vasiljeva L [1]
  • Van Den Born E [1]

Author by ORCID

  • Grimes JM [15]
  • Carrique L [13]
  • Keown JR [10]
  • Skidmore MA [9]
  • Owens RJ [9]
  • Mycroft-west CJ [9]
  • Wu L [9]
  • Gandhi NS [9]
  • Mosalaganti S [7]
  • Shah PNM [7]
  • Boyce M [7]
  • Howe A [7]
  • Fodor E [7]
  • Renner M [5]
  • Sheppard CM [5]
  • Screaton GR [5]
  • Barclay WS [5]
  • Kotecha A [5]
  • Staller E [5]
  • Ilca SL [5]
  • Mongkolsapaya J [5]
  • Fan H [5]
  • Chen K [2]
  • Wang F [2]
  • Sebesta M [2]
  • Keown J [2]
  • Fodor M [2]
  • Baazaoui A [2]
  • Rep A [2]
  • Krupovic M [1]
  • Augusto G [1]
  • Kilchert C [1]
  • Clarke JD [1]
  • Gillum A [1]
  • Ng WM [1]
  • Phillips SEV [1]
  • Huiskonen JT [1]
  • Vasiljeva L [1]
  • Duyvesteyn HME [1]
  • Liu Y [1]
  • Hay AL [1]
  • Mochizuki T [1]
  • Thorley L [1]
  • English S [1]
  • Ren J [1]
  • Kus K [1]
  • Segireddy RR [1]
  • Aydin E [1]

Journal

  • NAT COMMUN [21]
  • CELL HOST MICROBE [9]
  • TO BE PUBLISHED [3]
  • J VIROL [2]
  • J GEN VIROL [1]

Software

  • RELION [11]
  • CRYOSPARC [10]
  • CRYOLO [5]
  • WARP [5]
  • GCTF [1]
  • NAMD [1]
  • SPRING [1]

Microscope

  • TFS KRIOS [23]
  • FEI TITAN KRIOS [10]
  • FEI POLARA 300 [2]

Electron Source

  • FIELD EMISSION GUN [35]

Film or detector model

  • FEI FALCON IV 4K X 4K [16]
  • TFS FALCON 4I 4K X 4K [7]
  • GATAN K2 SUMMIT 4K X 4K [5]
  • GATAN K3 6K X 4K [4]
  • GATAN K2 QUANTUM 4K X 4K [2]
  • GATAN K3 BIOQUANTUM 6K X 4K [1]

External links

  • UniProt [27]
  • PDBe-Kb [23]
  • PDB [21]
  • Pfam [16]
  • InterPro [14]
  • AlphaFold DB [13]
  • Gene Ontology [13]
  • ChEBI [10]
  • ChEMBL [9]
  • Complex Portal [9]
  • DrugBank [5]
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Showing 1 - 10 of 35. Page 1 of 4
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EMD-54287
Download Map
3D View
Structure of human 1918 influenza A polymerase heterotrimer in complex with 1918 NEP.
Release date: Dec. 24, 2025
Resolution: 2.53 Å
EM Method: Single-particle
Fitted PDBs: 9rve
Q-score: 0.57

Rep A, Wang F, Chen K, Carrique L, Grimes JM, Fodor M

To Be Published

EMD-54376
Download Map
3D View
Structure of human 1918 influenza A polymerase heterotrimer in complex with WSN NEP.
Release date: Dec. 24, 2025
Resolution: 2.93 Å
EM Method: Single-particle
Fitted PDBs: 9ryc
Q-score: 0.528

Rep A, Wang F, Chen K, Carrique L, Grimes JM, Fodor M

To Be Published

EMD-51105
Download Map
3D View
Dissociated FMDV SAT2 Pentamer in complex with ultralong Fab117
Release date: Oct. 30, 2024
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 9g6v
Q-score: 0.501

Clarke JD, Duyvesteyn HME, Perez-Martin E, Latisenko U, Porta C, Humphreys KV, Hay AL, Ren J, Fry EE, van den Born E, Charleston B, Bonnet-Di Placido M, Owens RJ, Stuart DI, Hammond JA

J Gen Virol (2024) 105 [ Pubmed: 39422666 DOI: doi:10.1099/jgv.0.002032 ]

EMD-18643
Download Map
3D View
Structure of s. pombe RNA polymerase II in complex with DSIF and Rat1/Rai1
Release date: Oct. 23, 2024
Resolution: 2.67 Å
EM Method: Single-particle
Fitted PDBs: 8qsz
Q-score: 0.539

Kus K, Carrique L, Kecman T, Fournier M, Hassanein SS, Aydin E, Kilchert C, Grimes JM, Vasiljeva L

Nat Commun (2025) 16 pp. 10-10 [ DOI: doi:10.1038/s41467-024-55063-7 Pubmed: 39746995 ]

EMD-18818
Composite map
Download Map
3D View
Structure of avian H5N1 influenza A polymerase dimer in complex with human ANP32B.
Release date: May 8, 2024
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8r1j
Q-score: 0.501

Staller E, Carrique L, Swann OC, Fan H, Keown JR, Sheppard CM, Barclay WS, Grimes JM, Fodor E

Nat Commun (2024) 15 pp. 4123-4123 [ Pubmed: 38750014 DOI: doi:10.1038/s41467-024-48470-3 ]

EMD-18819
Download Map
3D View
Structure of avian H5N1 influenza A polymerase dimer in complex with human ANP32B Consensus map
Release date: May 8, 2024
Resolution: 3.3 Å
EM Method: Single-particle

Staller E, Carrique L, Swann OC, Fan H, Keown JR, Sheppard CM, Barclay WS, Grimes JM, Fodor E

Nat Commun (2024) 15 pp. 4123-4123 [ Pubmed: 38750014 DOI: doi:10.1038/s41467-024-48470-3 ]

EMD-18820
Download Map
3D View
Structure of avian H5N1 influenza A polymerase dimer in complex with human ANP32B Encapsidase focused .
Release date: May 8, 2024
Resolution: 3.2 Å
EM Method: Single-particle

Staller E, Carrique L, Swann OC, Fan H, Keown JR, Sheppard CM, Barclay WS, Grimes JM, Fodor E

Nat Commun (2024) 15 pp. 4123-4123 [ Pubmed: 38750014 DOI: doi:10.1038/s41467-024-48470-3 ]

EMD-18821
Download Map
3D View
Structure of avian H5N1 influenza A polymerase dimer in complex with human ANP32B Replicase focused .
Release date: May 8, 2024
Resolution: 3.2 Å
EM Method: Single-particle

Staller E, Carrique L, Swann OC, Fan H, Keown JR, Sheppard CM, Barclay WS, Grimes JM, Fodor E

Nat Commun (2024) 15 pp. 4123-4123 [ Pubmed: 38750014 DOI: doi:10.1038/s41467-024-48470-3 ]

EMD-18822
Download Map
3D View
Structure of avian H5N1 influenza A polymerase in complex with human ANP32B.
Release date: May 8, 2024
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8r1l
Q-score: 0.525

Staller E, Carrique L, Swann OC, Fan H, Keown JR, Sheppard CM, Barclay WS, Grimes JM, Fodor E

Nat Commun (2024) 15 pp. 4123-4123 [ Pubmed: 38750014 DOI: doi:10.1038/s41467-024-48470-3 ]

EMD-18945
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3D View
1918 H1N1 Viral polymerase heterotrimer in complex with 4 repeat serine-5 phosphorylated PolII peptide
Release date: March 27, 2024
Resolution: 3.23 Å
EM Method: Single-particle
Fitted PDBs: 8r60
Q-score: 0.406

Keown J, Baazaoui A, Sebesta M, Stefl R, Carrique L, Fodor E, Grimes JM

J Virol (2024) 98 pp. e0013824-e0013824 [ Pubmed: 38563748 DOI: doi:10.1128/jvi.00138-24 ]

Sort by: Download
Showing 1 - 10 of 35. Page 1 of 4
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [35]

Current status

  • REL [35]

Sample type

  • Protein [27]
  • Complex [21]
  • Virus [14]
  • Ligand [10]
  • RNA [3]
  • DNA [1]

Organism

  • Homo sapiens [14]
  • Rotavirus a [8]
  • Lama glama [8]
  • Influenza a virus [5]
  • Spondweni virus [4]
  • Influenza a virus [4]
  • Mus musculus [1]
  • Rabies lyssavirus [1]
  • Dengue virus [1]
  • Rabies lyssavirus [1]
  • Aeropyrum pernix bacilliform virus 1 [1]
  • Foot-and-mouth disease virus [1]
  • Schizosaccharomyces pombe [1]
  • Aeropyrum pernix bacilliform virus 1 [1]
  • Bos taurus [1]

EM Method

  • Single-particle [28]
  • Subtomogram averaging [7]

Resolution

  • ≥ 2Å and < 3Å [12]
  • ≥ 3Å and < 4Å [13]
  • ≥ 4Å and < 5Å [4]
  • ≥ 6Å and < 8Å [3]
  • ≥ 8Å and < 12Å [2]
  • ≥ 20Å and < 30Å [1]

Model molecular weight

  • 50-100 kDa [2]
  • 100-250 kDa [2]
  • 250-500 kDa [7]
  • 500-1000 kDa [3]
  • 1-2 MDa [3]
  • 5-10 MDa [1]
  • > 10 MDa [3]

Release Date

  • 2025 [2]
  • 2024 [18]
  • 2023 [8]
  • 2022 [1]
  • 2021 [5]
  • 2017 [1]

Author by name

  • Carrique L [15]
  • Grimes JM [15]
  • Keown JR [12]
  • Duyvesteyn HME [10]
  • Owens RJ [10]
  • Abdelkarim S [9]
  • Gandhi NS [9]
  • Mycroft-west CJ [9]
  • Skidmore MA [9]
  • Stuart DI [9]
  • Wu L [9]
  • Boyce M [8]
  • Burt A [8]
  • Chaban Y [8]
  • Forsberg BO [8]
  • Gilchrist JB [8]
  • Howe A [8]
  • Mosalaganti S [8]
  • Radecke J [8]
  • Shah PNM [8]
  • Sutton G [8]
  • Wan W [8]
  • Fodor E [7]
  • Barclay WS [5]
  • Dejnirattisai W [5]
  • Fan H [5]
  • Ho SF [5]
  • Ilca SL [5]
  • Karia D [5]
  • Kotecha A [5]
  • Martin IS [5]
  • Mongkolsapaya J [5]
  • Renner M [5]
  • Screaton GR [5]
  • Sheppard CM [5]
  • Staller E [5]
  • Swann OC [5]
  • Baazaoui A [2]
  • Chen K [2]
  • Fodor M [2]
  • Keown J [2]
  • Rep A [2]
  • Sebesta M [2]
  • Stefl R [2]
  • Wang F [2]
  • Augusto G [1]
  • Aydin E [1]
  • Berg A [1]
  • Bonnet-Di Placido M [1]
  • Bowden TA [1]
  • Charleston B [1]
  • Clarke JD [1]
  • Douglas AD [1]
  • English S [1]
  • Fedosyuk S [1]
  • Fournier M [1]
  • Fry EE [1]
  • Gillum A [1]
  • Hammond JA [1]
  • Haselon AS [1]
  • Hassanein SS [1]
  • Hay AL [1]
  • Huiskonen JT [1]
  • Humphreys KV [1]
  • Kecman T [1]
  • Kilchert C [1]
  • Krupovic M [1]
  • Kus K [1]
  • Latisenko U [1]
  • Liu Y [1]
  • Lucas-staat S [1]
  • Mochizuki T [1]
  • Ng WM [1]
  • Perez-martin E [1]
  • Phillips SEV [1]
  • Porta C [1]
  • Prangishvili D [1]
  • Ptchelkine D [1]
  • Ren J [1]
  • Segireddy RR [1]
  • Shah PN [1]
  • Thorley L [1]
  • Vasiljeva L [1]
  • Van Den Born E [1]

Author by ORCID

  • Grimes JM [15]
  • Carrique L [13]
  • Keown JR [10]
  • Skidmore MA [9]
  • Owens RJ [9]
  • Mycroft-west CJ [9]
  • Wu L [9]
  • Gandhi NS [9]
  • Mosalaganti S [7]
  • Shah PNM [7]
  • Boyce M [7]
  • Howe A [7]
  • Fodor E [7]
  • Renner M [5]
  • Sheppard CM [5]
  • Screaton GR [5]
  • Barclay WS [5]
  • Kotecha A [5]
  • Staller E [5]
  • Ilca SL [5]
  • Mongkolsapaya J [5]
  • Fan H [5]
  • Chen K [2]
  • Wang F [2]
  • Sebesta M [2]
  • Keown J [2]
  • Fodor M [2]
  • Baazaoui A [2]
  • Rep A [2]
  • Krupovic M [1]
  • Augusto G [1]
  • Kilchert C [1]
  • Clarke JD [1]
  • Gillum A [1]
  • Ng WM [1]
  • Phillips SEV [1]
  • Huiskonen JT [1]
  • Vasiljeva L [1]
  • Duyvesteyn HME [1]
  • Liu Y [1]
  • Hay AL [1]
  • Mochizuki T [1]
  • Thorley L [1]
  • English S [1]
  • Ren J [1]
  • Kus K [1]
  • Segireddy RR [1]
  • Aydin E [1]

Journal

  • NAT COMMUN [21]
  • CELL HOST MICROBE [9]
  • TO BE PUBLISHED [3]
  • J VIROL [2]
  • J GEN VIROL [1]

Software

  • RELION [11]
  • CRYOSPARC [10]
  • CRYOLO [5]
  • WARP [5]
  • GCTF [1]
  • NAMD [1]
  • SPRING [1]

Microscope

  • TFS KRIOS [23]
  • FEI TITAN KRIOS [10]
  • FEI POLARA 300 [2]

Electron Source

  • FIELD EMISSION GUN [35]

Film or detector model

  • FEI FALCON IV 4K X 4K [16]
  • TFS FALCON 4I 4K X 4K [7]
  • GATAN K2 SUMMIT 4K X 4K [5]
  • GATAN K3 6K X 4K [4]
  • GATAN K2 QUANTUM 4K X 4K [2]
  • GATAN K3 BIOQUANTUM 6K X 4K [1]

External links

  • UniProt [27]
  • PDBe-Kb [23]
  • PDB [21]
  • Pfam [16]
  • InterPro [14]
  • AlphaFold DB [13]
  • Gene Ontology [13]
  • ChEBI [10]
  • ChEMBL [9]
  • Complex Portal [9]
  • DrugBank [5]