Filter By
Current Database
- EMDB [50318]
- EMPIAR [808]
Current status
- REL [51126]
Sample type
- Complex [47339]
- Protein [35343]
- Ligand [21059]
- RNA [5110]
- DNA [3560]
- Sample [1678]
- Cellular component [1187]
- Virus [873]
- Cell [432]
- Other [222]
- Tissue [31]
Organism
- Homo sapiens [19815]
- Synthetic construct [3989]
- Mus musculus [3388]
- Escherichia coli [3122]
- Severe acute respiratory syndrome coronavirus [2468]
- Saccharomyces cerevisiae [2415]
- Rattus norvegicus [1159]
- Escherichia coli [1141]
- Oryctolagus cuniculus [978]
- Human immunodeficiency virus 1 [958]
- Bos taurus [949]
- Xenopus laevis [872]
- Sus scrofa [870]
- Saccharomyces cerevisiae [828]
- Lama glama [650]
- Arabidopsis thaliana [559]
- Macaca mulatta [449]
- Influenza a virus [320]
- Drosophila melanogaster [299]
- Mycolicibacterium smegmatis [297]
- Chlamydomonas reinhardtii [290]
- Bacillus subtilis [255]
- Mycobacterium tuberculosis [245]
- Gallus gallus [223]
- Escherichia coli [194]
- Vicugna pacos [183]
- Staphylococcus aureus [174]
- Pseudomonas aeruginosa [173]
- Thermus thermophilus [167]
- Enterobacteria phage m13 [166]
- Chaetomium thermophilum [161]
- Caenorhabditis elegans [158]
- Danio rerio [156]
- Chaetomium thermophilum [140]
- Mycobacterium tuberculosis [140]
- Saccharomyces cerevisiae [134]
- Tetrahymena thermophila [130]
- Ovis aries [130]
- Bacillus subtilis [124]
- Leishmania tarentolae [123]
- Plasmodium falciparum [114]
- Bacillus sp. (strain ps3) [113]
- Salmonella enterica [113]
- Synechocystis sp. pcc 6803 [109]
- Plasmodium falciparum [105]
- Enterobacteria phage t4 [102]
- Aequorea victoria [101]
- Streptococcus pyogenes [100]
- Pseudomonas aeruginosa [100]
- Mycolicibacterium smegmatis [99]
- Severe acute respiratory syndrome coronavirus [99]
- Geobacillus stearothermophilus [96]
- Escherichia coli [94]
- Vibrio cholerae [93]
- Escherichia virus t7 [88]
- Schizosaccharomyces pombe [88]
- Spinacia oleracea [82]
- Cricetulus griseus [74]
- Thermus thermophilus [71]
- Dna molecule [71]
- Macaca fascicularis [70]
- Clostridioides difficile [69]
- Monkeypox virus [68]
- Schizosaccharomyces pombe [68]
- Klebsiella pneumoniae [68]
- African swine fever virus [67]
- (no species) [66]
- Canis lupus [66]
- Middle east respiratory syndrome-related coronavirus [65]
- Sus scrofa [62]
- Enterobacteria phage t4 [61]
- Legionella pneumophila [61]
- Saccharomyces cerevisiae [61]
- Human herpesvirus 1 [60]
- Salmonella enterica [59]
- Polytomella sp. pringsheim 198.80 [58]
- Lassa mammarenavirus [56]
- Human immunodeficiency virus [56]
- Amanita phalloides [56]
- Escherichia phage lambda [55]
- Dictyostelium discoideum [55]
- (no species) [54]
- Eastern equine encephalitis virus [53]
- Clostridium botulinum [53]
- Thermoplasma acidophilum [53]
- Neurospora crassa [53]
- Flavobacterium johnsoniae [53]
- Streptococcus thermophilus [50]
- Acinetobacter baumannii [50]
- Trypanosoma brucei [50]
- Aquifex aeolicus [49]
- Severe acute respiratory syndrome coronavirus [49]
- Thermotoga maritima [49]
- Saccharolobus solfataricus [49]
- Human coronavirus hku1 [49]
- Chikungunya virus [49]
- Oryza sativa [49]
- (no species) [48]
- Nostoc sp. (strain pcc 7120 / sag 25.82 / utex 2576) [48]
- Komagataella phaffii [48]
EM Method
- Single-particle [45214]
- Helical reconstruction [1905]
- Subtomogram averaging [1614]
- Tomography [1467]
- Electron Crystallography [118]
Resolution
- < 2Å [417]
- ≥ 2Å and < 3Å [11557]
- ≥ 3Å and < 4Å [22263]
- ≥ 4Å and < 5Å [5104]
- ≥ 5Å and < 6Å [1183]
- ≥ 6Å and < 8Å [2274]
- ≥ 8Å and < 12Å [1667]
- ≥ 12Å and < 16Å [868]
- ≥ 16Å and < 20Å [746]
- ≥ 20Å and < 30Å [2208]
- ≥ 30Å [1327]
Model molecular weight
- 0-50 kDa [614]
- 50-100 kDa [2099]
- 100-250 kDa [10425]
- 250-500 kDa [8373]
- 500-1000 kDa [4762]
- 1-2 MDa [2120]
- 2-5 MDa [1915]
- 5-10 MDa [370]
- > 10 MDa [199]
Release Date
- 2026 [5433]
- 2025 [10692]
- 2024 [8322]
- 2023 [7121]
- 2022 [5539]
- 2021 [4049]
- 2020 [3432]
- 2019 [2033]
- 2018 [1408]
- 2017 [900]
- 2016 [755]
- 2015 [325]
- 2014 [262]
- 2013 [240]
- 2012 [157]
- 2011 [104]
- 2010 [81]
- 2009 [93]
- 2008 [19]
- 2007 [55]
- 2006 [56]
- 2005 [6]
- 2004 [23]
- 2003 [20]
- 2002 [1]
Author by name
- Zhang Y [1755]
- Ward AB [1696]
- Liu J [1691]
- Wang Y [1629]
- Zhang X [1448]
- Wang X [1390]
- Li Y [1279]
- Liu Y [1146]
- Zhang Z [1122]
- Zhang M [1103]
- Wang J [1090]
- Li X [1051]
- Ren G [1046]
- Li Z [976]
- Li J [936]
- Zhang L [909]
- Li S [892]
- Chen Y [852]
- Zhang J [826]
- Wang L [812]
- Wang S [809]
- Gao Y [778]
- Li H [748]
- Zhang S [718]
- Wang H [668]
- Chen Z [656]
- Chen X [648]
- Wang C [640]
- Liu S [611]
- Zhang H [610]
- Liu L [605]
- Liu H [598]
- Liu Z [593]
- Xu Y [591]
- Zhang K [590]
- Wu H [586]
- Shi Y [577]
- Beckmann R [573]
- Wang Q [571]
- Zhu Y [561]
- Chen J [553]
- Yang Y [551]
- Liu C [536]
- Zhao Y [531]
- Jiang Y [521]
- Li D [513]
- Cottrell CA [507]
- Han J [504]
- Wang Z [504]
- Burton DR [492]
- Yang X [492]
- Liu X [489]
- Cheng J [488]
- Ozorowski G [475]
- Huang Y [473]
- Zhou L [470]
- Wilson IA [459]
- Xu J [455]
- Xu C [435]
- Zhang C [427]
- Hu Z [425]
- Li W [424]
- Zhao J [418]
- Wu J [417]
- Torres JL [415]
- Wang W [413]
- Wu C [410]
- Sewall LM [402]
- Lu Y [400]
- Zhou Y [400]
- Sanders RW [396]
- Berninghausen O [391]
- Kwong PD [385]
- Zhu X [385]
- Sun Y [384]
- Wang M [382]
- Li L [378]
- Yu J [378]
- Yuan Q [377]
- Zhou Q [377]
- Yu X [375]
- Zhang B [372]
- Zhang W [372]
- Zhou J [368]
- Zhang Q [363]
- Zhang P [362]
- Chen L [361]
- Rubinstein JL [361]
- Xu HE [360]
- Yu Z [359]
- Wang P [358]
- Li M [356]
- Wu Y [354]
- Zhou ZH [353]
- Cheng Y [352]
- Li N [352]
- Li T [351]
- Wang F [351]
- Yang F [351]
- Hu Y [350]
Author by ORCID
- Ren G [1019]
- Liu J [907]
- Ward AB [850]
- Cottrell CA [504]
- Zhang M [393]
- Torres JL [344]
- Beckmann R [318]
- Kwong PD [300]
- Klinge S [296]
- Skiniotis G [295]
- Cheng Y [287]
- Rubinstein JL [279]
- Gao N [279]
- Kotecha A [275]
- Ozorowski G [274]
- Brown A [270]
- Crispin M [259]
- Kobilka BK [242]
- Xu HE [238]
- Schulman BA [233]
- Lyumkis D [232]
- Zhou ZH [227]
- Tao J [223]
- Bustamante C [223]
- Chiu W [223]
- Ashby PD [223]
- Allen JD [220]
- Hummer G [219]
- Andersen ES [217]
- Nureki O [216]
- Li H [214]
- Baker D [212]
- Geary C [209]
- Raunser S [206]
- Amunts A [205]
- Gao Y [205]
- Papasergi-scott MM [201]
- Williamson JR [200]
- Burton DR [199]
- Kanekiyo M [198]
- Scheres SHW [197]
- Copps J [194]
- Schief WR [192]
- Gmeiner P [192]
- Gao GF [186]
- Cheng J [186]
- Edwards RJ [186]
- Carnathan DG [186]
- He F [185]
- King NP [184]
- Han J [183]
- Zhang K [182]
- Kishikawa JI [182]
- Van Gils Mj [179]
- Vanden Broeck A [178]
- Hurt E [176]
- Zhang K [175]
- Hilger D [167]
- Denk T [165]
- Bai XC [164]
- Panova O [162]
- Subramaniam S [162]
- Zheng Q [161]
- Itoh Y [160]
- Greber BJ [160]
- Batebi H [160]
- Kuhlbrandt W [160]
- Perez-hernandez G [160]
- Hildebrand PW [160]
- Park YJ [159]
- Du J [158]
- Lander GC [158]
- Sanders RW [157]
- Beck M [157]
- Miotto MC [153]
- Chai P [153]
- Crowe Jr Je [152]
- Li N [151]
- Borgnia MJ [151]
- Veesler D [150]
- Lei D [148]
- Zhang P [147]
- Krammer F [146]
- Sobolevsky AI [145]
- Li S [145]
- Mclellan JS [145]
- Hirst J [144]
- Gui M [144]
- Zeng J [144]
- Stahlberg H [142]
- Wilson IA [141]
- Perrett HR [140]
- Wang X [140]
- Nogales E [139]
- Sewall LM [139]
- Crotty S [139]
- Wilson DN [139]
- Zhang Y [138]
- Venugopal H [137]
- Robinson CV [137]
Journal
- NAT COMMUN [9726]
- TO BE PUBLISHED [5494]
- NATURE [4553]
- NAT STRUCT MOL BIOL [2944]
- PNAS [2630]
- SCIENCE [2513]
- BIORXIV [2441]
- CELL [2077]
- MOL CELL [1798]
- SCI ADV [1718]
- ELIFE [1504]
- CELL REP [1251]
- STRUCTURE [1129]
- NUCLEIC ACIDS RES [1127]
- CELL RES [654]
- EMBO J [600]
- COMMUN BIOL [568]
- J BIOL CHEM [476]
- NAT CHEM BIOL [472]
- PLOS PATHOG [428]
- CELL DISCOV [413]
- NAT MICROBIOL [407]
- ACTA CRYSTALLOGR D STRUCT BIOL [392]
- J MOL BIOL [362]
- J VIROL [318]
- SCI REP [289]
- NAT METHODS [251]
- IMMUNITY [237]
- MBIO [237]
- NAT PLANTS [221]
- EMBO REP [192]
- J STRUCT BIOL [184]
- PLOS BIOL [179]
- PROTEIN SCI [177]
- J AM CHEM SOC [176]
- CELL HOST MICROBE [169]
- PROTEIN CELL [150]
- SCI TRANSL MED [143]
- J CELL BIOL [126]
- NEURON [121]
- NPJ VACCINES [114]
- IUCRJ [100]
- ISCIENCE [94]
- INT J MOL SCI [87]
- PLOS ONE [86]
- LIFE SCI ALLIANCE [79]
- J STRUCT BIOL X [78]
- PNAS NEXUS [77]
- SCI IMMUNOL [76]
- J MED CHEM [73]
- BIOCHEMISTRY [71]
- ADV SCI [70]
- VIRUSES [67]
- COMMUN CHEM [66]
- SIGNAL TRANSDUCT TARGET THER [63]
- MOL BIOL CELL [60]
- ANGEW CHEM INT ED ENGL [57]
- FEBS J [57]
- BIOCHEM BIOPHYS RES COMMUN [56]
- BLOOD [56]
- INT J BIOL MACROMOL [56]
- J CLIN INV [55]
- RES SQ [54]
- FRONT ENDOCRINOL [53]
- ACS NANO [51]
- NAT CATAL [49]
- RNA [47]
- NAT NANOTECHNOL [46]
- BIOMOLECULES [42]
- FRONT MOL BIOSCI [39]
- MOL PLANT [39]
- PLANT CELL [39]
- CURR BIOL [37]
- DEV CELL [37]
- EBIOMEDICINE [37]
- CELL REP METHODS [36]
- PLANT COMMUN. [35]
- GENES DEV [34]
- NAT CELL BIOL [34]
- FEBS LETT [33]
- ACTA PHARMACOL.SIN. [30]
- NAT CHEM [30]
- NAT IMMUNOL [30]
- ACTA CRYSTALLOGR F STRUCT BIOL COMMUN [29]
- BIOCHIM BIOPHYS ACTA BIOENERG [28]
- EMERG MICROBES INFECT [28]
- ACS CENT SCI [27]
- CELL REP MED [26]
- J EXP MED [26]
- SCI SIGNAL [26]
- BIOCHEM J [25]
- FRONT IMMUNOL [25]
- NATL SCI REV [25]
- ACS CHEM BIOL [24]
- CELL CHEM BIOL [23]
- J.MOL.CELL.CARDIOL. [23]
- NAT MATER [23]
- CELL DEATH DIFFER. [22]
- FRONT MICROBIOL [22]
- NAT BIOTECHNOL [21]
Software
- CRYOSPARC [14514]
- RELION [12579]
- CTFFIND [2198]
- GCTF [1495]
- SPIDER [608]
- IPET [444]
- TOMOCTF [399]
- CISTEM [389]
- FREALIGN [374]
- COOT [350]
- IMOD [350]
- WARP [339]
- EMAN2 [258]
- PHENIX [247]
- CHIMERA [232]
- EMAN [209]
- UCSF CHIMERAX [191]
- DYNAMO [158]
- PEET [115]
- SPHIRE [111]
- UCSF CHIMERA [98]
- CRYOLO [97]
- PYTOM [86]
- IMAGIC [84]
- XMIPP [77]
- SPARX [58]
- EMCLARITY [57]
- TOMO3D [54]
- NOVASTA [53]
- CTFFIND3 [47]
- JSPR [42]
- MDFF [42]
- NOVACTF [42]
- ISOLDE [40]
- M [39]
- AIMLESS [35]
- SIMPLE [35]
- MATLAB [34]
- STOPGAP [34]
- SITUS [31]
- IMOD, PEET [30]
- APPION [27]
- TOM [27]
- AV3 [26]
- SCIPION [26]
- CTFFIND3, RELION [24]
- EMAN2, SPARX [24]
- CTFFIND4 [22]
- ETOMO [22]
- FREALIX [22]
- EMFIT [21]
- TOM TOOLBOX [21]
- AUTO3DEM [20]
- IMAGIC, SPIDER [20]
- CTFTILT [19]
- O [19]
- EMAN2, RELION [18]
- SPIDER, RELION [18]
- CRYODRGN [17]
- SPIDER, APPION [17]
- I3 [16]
- IMAGIC, CUSTOM, SPIDER [16]
- APPION, SPIDER, EMAN [15]
- CHIMERA, COOT [15]
- COMET [15]
- J3DR [15]
- TOMOALIGN [15]
- CTFPHASEFLIP [14]
- RELION, CTFFIND3 [14]
- URO [14]
- CHIMERA, SITUS [13]
- EMREADY [13]
- JALIGN [13]
- REFMAC [12]
- FOCUS [11]
- GAP [11]
- IHRSR [11]
- SIGNATURE, CTFFIND3, SPIDER, SPARX [11]
- SPIDER PACKAGE [11]
- SUBTOM [11]
- UNBLUR, CTFFIND4, FREALIGN [11]
- CHIMERA, MDFF [10]
- EM3DR2 [10]
- EMAN1 [10]
- IMAGIC-5, SPIDER [10]
- MOTIONCORR2 [10]
- SPIDER, SPARX [10]
- AMIRA [9]
- BSOFT [9]
- EMAN2, IMAGIC, FREALIGN, RSAMPLE, CTFFIND3 [9]
- EMAN2/SPARX [9]
- PHASER [9]
- SPARX/EMAN2 [9]
- SPIDER, EMAN [9]
- SPRING [9]
- TOPAZ [9]
- XMIPP, SPIDER [9]
- MPSA [8]
- NAMD [8]
- RELION, FREALIGN [8]
Microscope
- FEI TITAN KRIOS [27183]
- TFS KRIOS [12185]
- FEI TALOS ARCTICA [2653]
- TFS GLACIOS [1731]
- FEI TECNAI F20 [937]
- FEI POLARA 300 [854]
- FEI TECNAI SPIRIT [721]
- JEOL CRYO ARM 300 [640]
- FEI TITAN [518]
- FEI TECNAI F30 [501]
- FEI TECNAI ARCTICA [351]
- ZEISS LIBRA120PLUS [301]
- FEI TECNAI 20 [224]
- TFS TALOS [203]
- FEI TECNAI 12 [192]
- FEI/PHILIPS CM200FEG [124]
- JEOL 3200FSC [114]
- JEOL CRYO ARM 200 [92]
- TFS TALOS L120C [75]
- JEOL 2100F [70]
- JEOL 2010F [67]
- TFS TALOS F200C [62]
- JEOL 2200FS [60]
- FEI/PHILIPS CM300FEG/T [53]
- FEI/PHILIPS EM420 [46]
- JEOL 2100 [44]
- TFS TITAN THEMIS [39]
- FEI MORGAGNI [28]
- OTHER [27]
- JEOL 3200FS [25]
- JEOL 3100FFC [24]
- JEOL 1230 [23]
- TFS TUNDRA [18]
- JEOL 1400 [17]
- JEOL 1200EXII [16]
- JEOL 4000EX [13]
- FEI/PHILIPS CM300FEG/HE [12]
- FEI TECNAI 10 [11]
- FEI/PHILIPS CM200FEG/ST [11]
- JEOL 1400/HR YPS FEG [11]
- JEOL 3000SFF [9]
- FEI/PHILIPS CM12 [8]
- JEOL 2200FSC [8]
- FEI/PHILIPS CM120T [7]
- JEOL KYOTO-3000SFF [6]
- FEI/PHILIPS CM200FEG/UT [5]
- FEI/PHILIPS CM10 [4]
- JEOL 1010 [4]
- JEOL 2010 [4]
- JEOL 3100FEF [4]
- FEI TECNAI SPHERA [3]
- JEOL 1200EX [3]
- FEI/PHILIPS CM200T [2]
- FEI/PHILIPS CM300FEG/ST [2]
- HITACHI EF2000 [2]
- HITACHI H-9500SD [2]
- JEOL 100CX [2]
- FEI/PHILIPS CM200FEG/SOPHIE [1]
- JEOL 1200 [1]
- JEOL 2010HC [1]
- JEOL 2011 [1]
- SHUIMU TOTEM 300S [1]
Electron Source
- FIELD EMISSION GUN [48510]
- LAB6 [1408]
- OTHER [304]
- TUNGSTEN HAIRPIN [97]
Film or detector model
- GATAN K3 6K X 4K [13833]
- GATAN K3 BIOQUANTUM 6K X 4K [10553]
- GATAN K2 SUMMIT 4K X 4K [9411]
- FEI FALCON IV 4K X 4K [5154]
- FEI FALCON III 4K X 4K [2562]
- GATAN K2 QUANTUM 4K X 4K [1863]
- FEI FALCON II 4K X 4K [1191]
- TFS FALCON 4I 4K X 4K [1175]
- TVIPS TEMCAM-F416 4K X 4K [722]
- GATAN ULTRASCAN 4000 4K X 4K [709]
- GATAN K3 BIOCONTINUUM 6K X 4K [568]
- FEI EAGLE 4K X 4K [429]
- KODAK SO-163 FILM [428]
- FEI CETA 4K X 4K [332]
- OTHER [320]
- GATAN K2 BASE 4K X 4K [190]
- GATAN K2 4K X 4K [107]
- DIRECT ELECTRON DE-20 5K X 3K [83]
- FEI FALCON I 4K X 4K [73]
- TVIPS TEMCAM-F415 4K X 4K [69]
- FEI EAGLE 2K X 2K [48]
- GATAN ULTRASCAN 1000 2K X 2K [47]
- GENERIC GATAN 4K X 4K [47]
- GENERIC CCD [43]
- GENERIC TVIPS 4K X 4K [39]
- DIRECT ELECTRON DE-16 4K X 4K [38]
- DIRECT ELECTRON DE-64 8K X 8K [33]
- TVIPS TEMCAM-F816 8K X 8K [32]
- GATAN K2 IS 4K X 4K [31]
- DIRECT ELECTRON APOLLO 4K X 4K [30]
- GENERIC GATAN [27]
- GATAN MULTISCAN [22]
- DIRECT ELECTRON DE-10 5K X 4K [20]
- DECTRIS SINGLA 1K X 1K [12]
- DIRECT ELECTRON DE-12 4K X 3K [11]
- TVIPS TEMCAM-F224 2K X 2K [11]
- TVIPS TEMCAM-F216 2K X 2K [9]
- GENERIC FILM [6]
- KODAK 4489 FILM [6]
- AGFA SCIENTA FILM [5]
- GATAN ALPINE 2.3K X 3.2K [5]
- GENERIC GATAN 2K X 2K [4]
- DECTRIS ELA 1K X 0.5K [3]
- GATAN ORIUS SC200 2K X 2K [3]
- GENERIC IMAGE PLATES [3]
- GENERIC TVIPS [3]
- GATAN ORIUS SC1000 4K X 2.7K [2]
- GATAN ORIUS SC600 2.7K X 2.7K [2]
- DECTRIS ARINA 0.2K X 0.2K [1]
- GATAN ULTRASCAN 10000 10K X 10K [1]
- GENERIC TVIPS 2K X 2K [1]
EMPIAR Experiment type
- EMDB [800]
- IHM [3]
- CLEM [1]
- FIB-SEM [1]
- SBF-SEM [1]
- SSET [1]
- SXT [1]
EMPIAR Image category
- MICROGRAPHS - MULTIFRAME [658]
- MICROGRAPHS - SINGLE FRAME [160]
- PICKED PARTICLES - SINGLE FRAME - PROCESSED [47]
- PICKED PARTICLES - MULTIFRAME - PROCESSED [31]
- TILT SERIES [29]
- PICKED PARTICLES - MULTIFRAME - UNPROCESSED [10]
- PICKED PARTICLES - SINGLE FRAME - UNPROCESSED [7]
- RECONSTRUCTED VOLUMES [5]
- SUBTOMOGRAMS [3]
- CLASS AVERAGES [2]
- MICROGRAPHS - FOCAL PAIRS - UNPROCESSED [1]
External links
- PDB [49637]
- UniProt [32033]
- PDBe-Kb [29948]
- AlphaFold DB [29482]
- Gene Ontology [24374]
- InterPro [23276]
- Pfam [22876]
- ChEBI [19228]
- ChEMBL [17396]
- DrugBank [15623]
- Complex Portal [9703]
- EMPIAR [4668]
- EMDB [799]
- SCOP2 [582]
- CATH [362]
- BioImage Archive [1]
Chao TC, Chen SF, Kim HJ, Tang HC, Tseng HC, Xu A, Palao 3rd L, Khadka S, Li T, Huang MF, Lee DF, Murakami K, Boyer TG, Tsai KL
Mol Cell (2024) 84 pp. 3932-3949.e10 [ Pubmed: 39321804 DOI: doi:10.1016/j.molcel.2024.09.001 ]
Resolution: 8.9 Å
EM Method: Single-particle
Thakur B, Acharya P
To Be Published
Resolution: 8.48 Å
EM Method: Single-particle
Thakur B, Acharya P
To Be Published
Resolution: 8.33 Å
EM Method: Single-particle
Thakur B, Acharya P
To Be Published
Resolution: 8.99 Å
EM Method: Single-particle
Thakur B, Acharya P
To Be Published
Resolution: 4.54 Å
EM Method: Single-particle
Thakur B, Acharya P
To Be Published
Resolution: 7.68 Å
EM Method: Single-particle
Thakur B, Acharya P
To Be Published
Resolution: 5.5 Å
EM Method: Single-particle
Thakur B, Acharya P
To Be Published
Resolution: 6.7 Å
EM Method: Single-particle
Thakur B, Acharya P
To Be Published
Resolution: 4.4 Å
EM Method: Single-particle
Fitted PDBs: 9e6g
Q-score: 0.294
Thakur B, Acharya P
To Be Published
Filter By
Current Database
- EMDB [50318]
- EMPIAR [808]
Current status
- REL [51126]
Sample type
- Complex [47339]
- Protein [35343]
- Ligand [21059]
- RNA [5110]
- DNA [3560]
- Sample [1678]
- Cellular component [1187]
- Virus [873]
- Cell [432]
- Other [222]
- Tissue [31]
Organism
- Homo sapiens [19815]
- Synthetic construct [3989]
- Mus musculus [3388]
- Escherichia coli [3122]
- Severe acute respiratory syndrome coronavirus [2468]
- Saccharomyces cerevisiae [2415]
- Rattus norvegicus [1159]
- Escherichia coli [1141]
- Oryctolagus cuniculus [978]
- Human immunodeficiency virus 1 [958]
- Bos taurus [949]
- Xenopus laevis [872]
- Sus scrofa [870]
- Saccharomyces cerevisiae [828]
- Lama glama [650]
- Arabidopsis thaliana [559]
- Macaca mulatta [449]
- Influenza a virus [320]
- Drosophila melanogaster [299]
- Mycolicibacterium smegmatis [297]
- Chlamydomonas reinhardtii [290]
- Bacillus subtilis [255]
- Mycobacterium tuberculosis [245]
- Gallus gallus [223]
- Escherichia coli [194]
- Vicugna pacos [183]
- Staphylococcus aureus [174]
- Pseudomonas aeruginosa [173]
- Thermus thermophilus [167]
- Enterobacteria phage m13 [166]
- Chaetomium thermophilum [161]
- Caenorhabditis elegans [158]
- Danio rerio [156]
- Chaetomium thermophilum [140]
- Mycobacterium tuberculosis [140]
- Saccharomyces cerevisiae [134]
- Tetrahymena thermophila [130]
- Ovis aries [130]
- Bacillus subtilis [124]
- Leishmania tarentolae [123]
- Plasmodium falciparum [114]
- Bacillus sp. (strain ps3) [113]
- Salmonella enterica [113]
- Synechocystis sp. pcc 6803 [109]
- Plasmodium falciparum [105]
- Enterobacteria phage t4 [102]
- Aequorea victoria [101]
- Streptococcus pyogenes [100]
- Pseudomonas aeruginosa [100]
- Mycolicibacterium smegmatis [99]
- Severe acute respiratory syndrome coronavirus [99]
- Geobacillus stearothermophilus [96]
- Escherichia coli [94]
- Vibrio cholerae [93]
- Escherichia virus t7 [88]
- Schizosaccharomyces pombe [88]
- Spinacia oleracea [82]
- Cricetulus griseus [74]
- Thermus thermophilus [71]
- Dna molecule [71]
- Macaca fascicularis [70]
- Clostridioides difficile [69]
- Monkeypox virus [68]
- Schizosaccharomyces pombe [68]
- Klebsiella pneumoniae [68]
- African swine fever virus [67]
- (no species) [66]
- Canis lupus [66]
- Middle east respiratory syndrome-related coronavirus [65]
- Sus scrofa [62]
- Enterobacteria phage t4 [61]
- Legionella pneumophila [61]
- Saccharomyces cerevisiae [61]
- Human herpesvirus 1 [60]
- Salmonella enterica [59]
- Polytomella sp. pringsheim 198.80 [58]
- Lassa mammarenavirus [56]
- Human immunodeficiency virus [56]
- Amanita phalloides [56]
- Escherichia phage lambda [55]
- Dictyostelium discoideum [55]
- (no species) [54]
- Eastern equine encephalitis virus [53]
- Clostridium botulinum [53]
- Thermoplasma acidophilum [53]
- Neurospora crassa [53]
- Flavobacterium johnsoniae [53]
- Streptococcus thermophilus [50]
- Acinetobacter baumannii [50]
- Trypanosoma brucei [50]
- Aquifex aeolicus [49]
- Severe acute respiratory syndrome coronavirus [49]
- Thermotoga maritima [49]
- Saccharolobus solfataricus [49]
- Human coronavirus hku1 [49]
- Chikungunya virus [49]
- Oryza sativa [49]
- (no species) [48]
- Nostoc sp. (strain pcc 7120 / sag 25.82 / utex 2576) [48]
- Komagataella phaffii [48]
EM Method
- Single-particle [45214]
- Helical reconstruction [1905]
- Subtomogram averaging [1614]
- Tomography [1467]
- Electron Crystallography [118]
Resolution
- < 2Å [417]
- ≥ 2Å and < 3Å [11557]
- ≥ 3Å and < 4Å [22263]
- ≥ 4Å and < 5Å [5104]
- ≥ 5Å and < 6Å [1183]
- ≥ 6Å and < 8Å [2274]
- ≥ 8Å and < 12Å [1667]
- ≥ 12Å and < 16Å [868]
- ≥ 16Å and < 20Å [746]
- ≥ 20Å and < 30Å [2208]
- ≥ 30Å [1327]
Model molecular weight
- 0-50 kDa [614]
- 50-100 kDa [2099]
- 100-250 kDa [10425]
- 250-500 kDa [8373]
- 500-1000 kDa [4762]
- 1-2 MDa [2120]
- 2-5 MDa [1915]
- 5-10 MDa [370]
- > 10 MDa [199]
Release Date
- 2026 [5433]
- 2025 [10692]
- 2024 [8322]
- 2023 [7121]
- 2022 [5539]
- 2021 [4049]
- 2020 [3432]
- 2019 [2033]
- 2018 [1408]
- 2017 [900]
- 2016 [755]
- 2015 [325]
- 2014 [262]
- 2013 [240]
- 2012 [157]
- 2011 [104]
- 2010 [81]
- 2009 [93]
- 2008 [19]
- 2007 [55]
- 2006 [56]
- 2005 [6]
- 2004 [23]
- 2003 [20]
- 2002 [1]
Author by name
- Zhang Y [1755]
- Ward AB [1696]
- Liu J [1691]
- Wang Y [1629]
- Zhang X [1448]
- Wang X [1390]
- Li Y [1279]
- Liu Y [1146]
- Zhang Z [1122]
- Zhang M [1103]
- Wang J [1090]
- Li X [1051]
- Ren G [1046]
- Li Z [976]
- Li J [936]
- Zhang L [909]
- Li S [892]
- Chen Y [852]
- Zhang J [826]
- Wang L [812]
- Wang S [809]
- Gao Y [778]
- Li H [748]
- Zhang S [718]
- Wang H [668]
- Chen Z [656]
- Chen X [648]
- Wang C [640]
- Liu S [611]
- Zhang H [610]
- Liu L [605]
- Liu H [598]
- Liu Z [593]
- Xu Y [591]
- Zhang K [590]
- Wu H [586]
- Shi Y [577]
- Beckmann R [573]
- Wang Q [571]
- Zhu Y [561]
- Chen J [553]
- Yang Y [551]
- Liu C [536]
- Zhao Y [531]
- Jiang Y [521]
- Li D [513]
- Cottrell CA [507]
- Han J [504]
- Wang Z [504]
- Burton DR [492]
- Yang X [492]
- Liu X [489]
- Cheng J [488]
- Ozorowski G [475]
- Huang Y [473]
- Zhou L [470]
- Wilson IA [459]
- Xu J [455]
- Xu C [435]
- Zhang C [427]
- Hu Z [425]
- Li W [424]
- Zhao J [418]
- Wu J [417]
- Torres JL [415]
- Wang W [413]
- Wu C [410]
- Sewall LM [402]
- Lu Y [400]
- Zhou Y [400]
- Sanders RW [396]
- Berninghausen O [391]
- Kwong PD [385]
- Zhu X [385]
- Sun Y [384]
- Wang M [382]
- Li L [378]
- Yu J [378]
- Yuan Q [377]
- Zhou Q [377]
- Yu X [375]
- Zhang B [372]
- Zhang W [372]
- Zhou J [368]
- Zhang Q [363]
- Zhang P [362]
- Chen L [361]
- Rubinstein JL [361]
- Xu HE [360]
- Yu Z [359]
- Wang P [358]
- Li M [356]
- Wu Y [354]
- Zhou ZH [353]
- Cheng Y [352]
- Li N [352]
- Li T [351]
- Wang F [351]
- Yang F [351]
- Hu Y [350]
Author by ORCID
- Ren G [1019]
- Liu J [907]
- Ward AB [850]
- Cottrell CA [504]
- Zhang M [393]
- Torres JL [344]
- Beckmann R [318]
- Kwong PD [300]
- Klinge S [296]
- Skiniotis G [295]
- Cheng Y [287]
- Rubinstein JL [279]
- Gao N [279]
- Kotecha A [275]
- Ozorowski G [274]
- Brown A [270]
- Crispin M [259]
- Kobilka BK [242]
- Xu HE [238]
- Schulman BA [233]
- Lyumkis D [232]
- Zhou ZH [227]
- Tao J [223]
- Bustamante C [223]
- Chiu W [223]
- Ashby PD [223]
- Allen JD [220]
- Hummer G [219]
- Andersen ES [217]
- Nureki O [216]
- Li H [214]
- Baker D [212]
- Geary C [209]
- Raunser S [206]
- Amunts A [205]
- Gao Y [205]
- Papasergi-scott MM [201]
- Williamson JR [200]
- Burton DR [199]
- Kanekiyo M [198]
- Scheres SHW [197]
- Copps J [194]
- Schief WR [192]
- Gmeiner P [192]
- Gao GF [186]
- Cheng J [186]
- Edwards RJ [186]
- Carnathan DG [186]
- He F [185]
- King NP [184]
- Han J [183]
- Zhang K [182]
- Kishikawa JI [182]
- Van Gils Mj [179]
- Vanden Broeck A [178]
- Hurt E [176]
- Zhang K [175]
- Hilger D [167]
- Denk T [165]
- Bai XC [164]
- Panova O [162]
- Subramaniam S [162]
- Zheng Q [161]
- Itoh Y [160]
- Greber BJ [160]
- Batebi H [160]
- Kuhlbrandt W [160]
- Perez-hernandez G [160]
- Hildebrand PW [160]
- Park YJ [159]
- Du J [158]
- Lander GC [158]
- Sanders RW [157]
- Beck M [157]
- Miotto MC [153]
- Chai P [153]
- Crowe Jr Je [152]
- Li N [151]
- Borgnia MJ [151]
- Veesler D [150]
- Lei D [148]
- Zhang P [147]
- Krammer F [146]
- Sobolevsky AI [145]
- Li S [145]
- Mclellan JS [145]
- Hirst J [144]
- Gui M [144]
- Zeng J [144]
- Stahlberg H [142]
- Wilson IA [141]
- Perrett HR [140]
- Wang X [140]
- Nogales E [139]
- Sewall LM [139]
- Crotty S [139]
- Wilson DN [139]
- Zhang Y [138]
- Venugopal H [137]
- Robinson CV [137]
Journal
- NAT COMMUN [9726]
- TO BE PUBLISHED [5494]
- NATURE [4553]
- NAT STRUCT MOL BIOL [2944]
- PNAS [2630]
- SCIENCE [2513]
- BIORXIV [2441]
- CELL [2077]
- MOL CELL [1798]
- SCI ADV [1718]
- ELIFE [1504]
- CELL REP [1251]
- STRUCTURE [1129]
- NUCLEIC ACIDS RES [1127]
- CELL RES [654]
- EMBO J [600]
- COMMUN BIOL [568]
- J BIOL CHEM [476]
- NAT CHEM BIOL [472]
- PLOS PATHOG [428]
- CELL DISCOV [413]
- NAT MICROBIOL [407]
- ACTA CRYSTALLOGR D STRUCT BIOL [392]
- J MOL BIOL [362]
- J VIROL [318]
- SCI REP [289]
- NAT METHODS [251]
- IMMUNITY [237]
- MBIO [237]
- NAT PLANTS [221]
- EMBO REP [192]
- J STRUCT BIOL [184]
- PLOS BIOL [179]
- PROTEIN SCI [177]
- J AM CHEM SOC [176]
- CELL HOST MICROBE [169]
- PROTEIN CELL [150]
- SCI TRANSL MED [143]
- J CELL BIOL [126]
- NEURON [121]
- NPJ VACCINES [114]
- IUCRJ [100]
- ISCIENCE [94]
- INT J MOL SCI [87]
- PLOS ONE [86]
- LIFE SCI ALLIANCE [79]
- J STRUCT BIOL X [78]
- PNAS NEXUS [77]
- SCI IMMUNOL [76]
- J MED CHEM [73]
- BIOCHEMISTRY [71]
- ADV SCI [70]
- VIRUSES [67]
- COMMUN CHEM [66]
- SIGNAL TRANSDUCT TARGET THER [63]
- MOL BIOL CELL [60]
- ANGEW CHEM INT ED ENGL [57]
- FEBS J [57]
- BIOCHEM BIOPHYS RES COMMUN [56]
- BLOOD [56]
- INT J BIOL MACROMOL [56]
- J CLIN INV [55]
- RES SQ [54]
- FRONT ENDOCRINOL [53]
- ACS NANO [51]
- NAT CATAL [49]
- RNA [47]
- NAT NANOTECHNOL [46]
- BIOMOLECULES [42]
- FRONT MOL BIOSCI [39]
- MOL PLANT [39]
- PLANT CELL [39]
- CURR BIOL [37]
- DEV CELL [37]
- EBIOMEDICINE [37]
- CELL REP METHODS [36]
- PLANT COMMUN. [35]
- GENES DEV [34]
- NAT CELL BIOL [34]
- FEBS LETT [33]
- ACTA PHARMACOL.SIN. [30]
- NAT CHEM [30]
- NAT IMMUNOL [30]
- ACTA CRYSTALLOGR F STRUCT BIOL COMMUN [29]
- BIOCHIM BIOPHYS ACTA BIOENERG [28]
- EMERG MICROBES INFECT [28]
- ACS CENT SCI [27]
- CELL REP MED [26]
- J EXP MED [26]
- SCI SIGNAL [26]
- BIOCHEM J [25]
- FRONT IMMUNOL [25]
- NATL SCI REV [25]
- ACS CHEM BIOL [24]
- CELL CHEM BIOL [23]
- J.MOL.CELL.CARDIOL. [23]
- NAT MATER [23]
- CELL DEATH DIFFER. [22]
- FRONT MICROBIOL [22]
- NAT BIOTECHNOL [21]
Software
- CRYOSPARC [14514]
- RELION [12579]
- CTFFIND [2198]
- GCTF [1495]
- SPIDER [608]
- IPET [444]
- TOMOCTF [399]
- CISTEM [389]
- FREALIGN [374]
- COOT [350]
- IMOD [350]
- WARP [339]
- EMAN2 [258]
- PHENIX [247]
- CHIMERA [232]
- EMAN [209]
- UCSF CHIMERAX [191]
- DYNAMO [158]
- PEET [115]
- SPHIRE [111]
- UCSF CHIMERA [98]
- CRYOLO [97]
- PYTOM [86]
- IMAGIC [84]
- XMIPP [77]
- SPARX [58]
- EMCLARITY [57]
- TOMO3D [54]
- NOVASTA [53]
- CTFFIND3 [47]
- JSPR [42]
- MDFF [42]
- NOVACTF [42]
- ISOLDE [40]
- M [39]
- AIMLESS [35]
- SIMPLE [35]
- MATLAB [34]
- STOPGAP [34]
- SITUS [31]
- IMOD, PEET [30]
- APPION [27]
- TOM [27]
- AV3 [26]
- SCIPION [26]
- CTFFIND3, RELION [24]
- EMAN2, SPARX [24]
- CTFFIND4 [22]
- ETOMO [22]
- FREALIX [22]
- EMFIT [21]
- TOM TOOLBOX [21]
- AUTO3DEM [20]
- IMAGIC, SPIDER [20]
- CTFTILT [19]
- O [19]
- EMAN2, RELION [18]
- SPIDER, RELION [18]
- CRYODRGN [17]
- SPIDER, APPION [17]
- I3 [16]
- IMAGIC, CUSTOM, SPIDER [16]
- APPION, SPIDER, EMAN [15]
- CHIMERA, COOT [15]
- COMET [15]
- J3DR [15]
- TOMOALIGN [15]
- CTFPHASEFLIP [14]
- RELION, CTFFIND3 [14]
- URO [14]
- CHIMERA, SITUS [13]
- EMREADY [13]
- JALIGN [13]
- REFMAC [12]
- FOCUS [11]
- GAP [11]
- IHRSR [11]
- SIGNATURE, CTFFIND3, SPIDER, SPARX [11]
- SPIDER PACKAGE [11]
- SUBTOM [11]
- UNBLUR, CTFFIND4, FREALIGN [11]
- CHIMERA, MDFF [10]
- EM3DR2 [10]
- EMAN1 [10]
- IMAGIC-5, SPIDER [10]
- MOTIONCORR2 [10]
- SPIDER, SPARX [10]
- AMIRA [9]
- BSOFT [9]
- EMAN2, IMAGIC, FREALIGN, RSAMPLE, CTFFIND3 [9]
- EMAN2/SPARX [9]
- PHASER [9]
- SPARX/EMAN2 [9]
- SPIDER, EMAN [9]
- SPRING [9]
- TOPAZ [9]
- XMIPP, SPIDER [9]
- MPSA [8]
- NAMD [8]
- RELION, FREALIGN [8]
Microscope
- FEI TITAN KRIOS [27183]
- TFS KRIOS [12185]
- FEI TALOS ARCTICA [2653]
- TFS GLACIOS [1731]
- FEI TECNAI F20 [937]
- FEI POLARA 300 [854]
- FEI TECNAI SPIRIT [721]
- JEOL CRYO ARM 300 [640]
- FEI TITAN [518]
- FEI TECNAI F30 [501]
- FEI TECNAI ARCTICA [351]
- ZEISS LIBRA120PLUS [301]
- FEI TECNAI 20 [224]
- TFS TALOS [203]
- FEI TECNAI 12 [192]
- FEI/PHILIPS CM200FEG [124]
- JEOL 3200FSC [114]
- JEOL CRYO ARM 200 [92]
- TFS TALOS L120C [75]
- JEOL 2100F [70]
- JEOL 2010F [67]
- TFS TALOS F200C [62]
- JEOL 2200FS [60]
- FEI/PHILIPS CM300FEG/T [53]
- FEI/PHILIPS EM420 [46]
- JEOL 2100 [44]
- TFS TITAN THEMIS [39]
- FEI MORGAGNI [28]
- OTHER [27]
- JEOL 3200FS [25]
- JEOL 3100FFC [24]
- JEOL 1230 [23]
- TFS TUNDRA [18]
- JEOL 1400 [17]
- JEOL 1200EXII [16]
- JEOL 4000EX [13]
- FEI/PHILIPS CM300FEG/HE [12]
- FEI TECNAI 10 [11]
- FEI/PHILIPS CM200FEG/ST [11]
- JEOL 1400/HR YPS FEG [11]
- JEOL 3000SFF [9]
- FEI/PHILIPS CM12 [8]
- JEOL 2200FSC [8]
- FEI/PHILIPS CM120T [7]
- JEOL KYOTO-3000SFF [6]
- FEI/PHILIPS CM200FEG/UT [5]
- FEI/PHILIPS CM10 [4]
- JEOL 1010 [4]
- JEOL 2010 [4]
- JEOL 3100FEF [4]
- FEI TECNAI SPHERA [3]
- JEOL 1200EX [3]
- FEI/PHILIPS CM200T [2]
- FEI/PHILIPS CM300FEG/ST [2]
- HITACHI EF2000 [2]
- HITACHI H-9500SD [2]
- JEOL 100CX [2]
- FEI/PHILIPS CM200FEG/SOPHIE [1]
- JEOL 1200 [1]
- JEOL 2010HC [1]
- JEOL 2011 [1]
- SHUIMU TOTEM 300S [1]
Electron Source
- FIELD EMISSION GUN [48510]
- LAB6 [1408]
- OTHER [304]
- TUNGSTEN HAIRPIN [97]
Film or detector model
- GATAN K3 6K X 4K [13833]
- GATAN K3 BIOQUANTUM 6K X 4K [10553]
- GATAN K2 SUMMIT 4K X 4K [9411]
- FEI FALCON IV 4K X 4K [5154]
- FEI FALCON III 4K X 4K [2562]
- GATAN K2 QUANTUM 4K X 4K [1863]
- FEI FALCON II 4K X 4K [1191]
- TFS FALCON 4I 4K X 4K [1175]
- TVIPS TEMCAM-F416 4K X 4K [722]
- GATAN ULTRASCAN 4000 4K X 4K [709]
- GATAN K3 BIOCONTINUUM 6K X 4K [568]
- FEI EAGLE 4K X 4K [429]
- KODAK SO-163 FILM [428]
- FEI CETA 4K X 4K [332]
- OTHER [320]
- GATAN K2 BASE 4K X 4K [190]
- GATAN K2 4K X 4K [107]
- DIRECT ELECTRON DE-20 5K X 3K [83]
- FEI FALCON I 4K X 4K [73]
- TVIPS TEMCAM-F415 4K X 4K [69]
- FEI EAGLE 2K X 2K [48]
- GATAN ULTRASCAN 1000 2K X 2K [47]
- GENERIC GATAN 4K X 4K [47]
- GENERIC CCD [43]
- GENERIC TVIPS 4K X 4K [39]
- DIRECT ELECTRON DE-16 4K X 4K [38]
- DIRECT ELECTRON DE-64 8K X 8K [33]
- TVIPS TEMCAM-F816 8K X 8K [32]
- GATAN K2 IS 4K X 4K [31]
- DIRECT ELECTRON APOLLO 4K X 4K [30]
- GENERIC GATAN [27]
- GATAN MULTISCAN [22]
- DIRECT ELECTRON DE-10 5K X 4K [20]
- DECTRIS SINGLA 1K X 1K [12]
- DIRECT ELECTRON DE-12 4K X 3K [11]
- TVIPS TEMCAM-F224 2K X 2K [11]
- TVIPS TEMCAM-F216 2K X 2K [9]
- GENERIC FILM [6]
- KODAK 4489 FILM [6]
- AGFA SCIENTA FILM [5]
- GATAN ALPINE 2.3K X 3.2K [5]
- GENERIC GATAN 2K X 2K [4]
- DECTRIS ELA 1K X 0.5K [3]
- GATAN ORIUS SC200 2K X 2K [3]
- GENERIC IMAGE PLATES [3]
- GENERIC TVIPS [3]
- GATAN ORIUS SC1000 4K X 2.7K [2]
- GATAN ORIUS SC600 2.7K X 2.7K [2]
- DECTRIS ARINA 0.2K X 0.2K [1]
- GATAN ULTRASCAN 10000 10K X 10K [1]
- GENERIC TVIPS 2K X 2K [1]
EMPIAR Experiment type
- EMDB [800]
- IHM [3]
- CLEM [1]
- FIB-SEM [1]
- SBF-SEM [1]
- SSET [1]
- SXT [1]
EMPIAR Image category
- MICROGRAPHS - MULTIFRAME [658]
- MICROGRAPHS - SINGLE FRAME [160]
- PICKED PARTICLES - SINGLE FRAME - PROCESSED [47]
- PICKED PARTICLES - MULTIFRAME - PROCESSED [31]
- TILT SERIES [29]
- PICKED PARTICLES - MULTIFRAME - UNPROCESSED [10]
- PICKED PARTICLES - SINGLE FRAME - UNPROCESSED [7]
- RECONSTRUCTED VOLUMES [5]
- SUBTOMOGRAMS [3]
- CLASS AVERAGES [2]
- MICROGRAPHS - FOCAL PAIRS - UNPROCESSED [1]
External links
- PDB [49637]
- UniProt [32033]
- PDBe-Kb [29948]
- AlphaFold DB [29482]
- Gene Ontology [24374]
- InterPro [23276]
- Pfam [22876]
- ChEBI [19228]
- ChEMBL [17396]
- DrugBank [15623]
- Complex Portal [9703]
- EMPIAR [4668]
- EMDB [799]
- SCOP2 [582]
- CATH [362]
- BioImage Archive [1]
