Electron Microscopy Data Bank

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author:"Tatli M"

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Author by name

Tatli M [24]
Medalia O [17]
Kronenberg-tenga R [8]
Bayer EA [7]
Mizrahi I [7]
Brignole EJ [6]
Dasso M [6]
Dip PV [6]
Lytton-jean AKR [6]
Mankus D [6]
Morais S [6]
Regmi SG [6]
Schuller AP [6]
Schwartz TU [6]
Weis K [6]
Wojtynek M [6]
Amit I [5]
Becher D [5]
Levin L [5]
Lisibach M [5]
Pfister B [5]
Simoni S [5]
Stahlberg H [5]
Todtli P [5]
Tovar-herrera O [5]
Trautwein-schult A [5]
Wimmer BH [5]
Zalk R [5]
Eibauer M [4]
Lashuel HA [3]
Abiko LA [2]
Bartesaghi A [2]
Bonne G [2]
Borgnia M [2]
Burbidge KJ [2]
Chen O [2]
Chung WL [2]
Desai S [2]
Donzelli S [2]
Duda AM [2]
Ehrnhoefer DE [2]
Gasparini L [2]
Geist D [2]
Grzesiek S [2]
Kolla R [2]
Li H [2]
Malankhanova T [2]
Martins B [2]
Mazzulli JR [2]
Nazarov S [2]
Patel N [2]
Perera L [2]
Petrovic I [2]
Reinhardt P [2]
Schondorf DC [2]
Shiell L [2]
Shin JY [2]
Sokratian A [2]
Sorrentino S [2]
Spang A [2]
Strader S [2]
Tovar-herrera OE [2]
Viverette E [2]
Weil MT [2]
West AB [2]
Worman HJ [2]
Wu W [2]
Xu E [2]
Yuan Y [2]
Zhou Y [2]
Bomble Y [1]
Bomble YJ [1]
Grahl A [1]
Limorenko G [1]
Moraïs S [1]
Ni D [1]

Author by ORCID

Medalia O [8]
Tatli M [8]
Mizrahi I [6]
Morais S [6]
Tovar-herrera O [5]
Bayer EA [5]
Pfister B [5]
Wimmer BH [5]
Trautwein-schult A [5]
Zalk R [5]
Lisibach M [5]
Weis K [4]
Schwartz TU [4]
Stahlberg H [4]
Dip PV [4]
Lytton-jean AKR [4]
Wojtynek M [4]
Dasso M [4]
Mankus D [4]
Lashuel HA [3]
Eibauer M [3]
Sokratian A [2]
Borgnia M [2]
Zhou Y [2]
Bonne G [2]
West AB [2]
Bartesaghi A [2]
Mazzulli JR [2]
Duda AM [2]
Perera L [2]
Xu E [2]
Strader S [2]
Kronenberg-tenga R [2]
Chen O [2]
Li H [2]
Patel N [2]
Shiell L [2]
Bomble YJ [1]
Spang A [1]
Chung WL [1]
Grzesiek S [1]
Gasparini L [1]
Petrovic I [1]
Desai S [1]

Journal

Software

Microscope

Electron Source

Film or detector model

EMPIAR Experiment type

EMPIAR Image category

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Showing 1 - 10 of 24. Page 1 of 3

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EMDB [17]
EMPIAR [7]

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EMD-53097

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Structure of the GH13 domain of Ruminococcus bromii Amy4

Release date: Oct. 22, 2025
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 9qf3
Q-score: 0.48

Wimmer BH, Morais S, Amit I, Tovar-Herrera O, Tatli M, Trautwein-Schult A, Pfister B, Zalk R, Todtli P, Simoni S, Lisibach M, Levin L, Becher D, Bayer EA, Medalia O, Mizrahi I

Nat Commun (2025) 16 pp. 10763-10763 [ Pubmed: 41298524 DOI: doi:10.1038/s41467-025-65800-1 ]

EMD-53101

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Structure of the GH13 and MucBP domains of Ruminococcus bromii Amy10

Release date: Oct. 22, 2025
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 9qf8
Q-score: 0.443

Wimmer BH, Morais S, Amit I, Tovar-Herrera O, Tatli M, Trautwein-Schult A, Pfister B, Zalk R, Todtli P, Simoni S, Lisibach M, Levin L, Becher D, Bayer EA, Medalia O, Mizrahi I

Nat Commun (2025) 16 pp. 10763-10763 [ Pubmed: 41298524 DOI: doi:10.1038/s41467-025-65800-1 ]

EMD-53102

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Structure of the GH13 domain of Ruminococcus bromii Amy16

Release date: Oct. 22, 2025
Resolution: 4.6 Å
EM Method: Single-particle
Fitted PDBs: 9qf9
Q-score: 0.173

Wimmer BH, Morais S, Amit I, Tovar-Herrera O, Tatli M, Trautwein-Schult A, Pfister B, Zalk R, Todtli P, Simoni S, Lisibach M, Levin L, Becher D, Bayer EA, Medalia O, Mizrahi I

Nat Commun (2025) 16 pp. 10763-10763 [ Pubmed: 41298524 DOI: doi:10.1038/s41467-025-65800-1 ]

EMD-53103

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Structure of the GH13 and MucBP domains of Ruminococcus bromii Amy12

Release date: Oct. 22, 2025
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 9qfa
Q-score: 0.493

Wimmer BH, Morais S, Amit I, Tovar-Herrera O, Tatli M, Trautwein-Schult A, Pfister B, Zalk R, Todtli P, Simoni S, Lisibach M, Levin L, Becher D, Bayer EA, Medalia O, Mizrahi I

Nat Commun (2025) 16 pp. 10763-10763 [ Pubmed: 41298524 DOI: doi:10.1038/s41467-025-65800-1 ]

EMD-53104

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Ruminococcus bromii ribosome

Release date: Oct. 22, 2025
Resolution: 14.0 Å
EM Method: Subtomogram averaging

Wimmer BH, Morais S, Amit I, Tovar-Herrera O, Tatli M, Trautwein-Schult A, Pfister B, Zalk R, Todtli P, Simoni S, Lisibach M, Levin L, Becher D, Bayer EA, Medalia O, Mizrahi I

Nat Commun (2025) 16 pp. 10763-10763 [ Pubmed: 41298524 DOI: doi:10.1038/s41467-025-65800-1 ]

EMPIAR-12139

Release date: May 13, 2025
Dataset size: 9.5 TB
Experiment type: EMDB

Abiko LA, Petrovic I, Tatli M, Stahlberg H, Grzesiek S, Petrovic I, Desai S, Stahlberg H, Spang A, Grzesiek S

Proc Natl Acad Sci U S A (2025) 122 [ Pubmed: 40372433 DOI: 10.1073/pnas.2501487122 ]

Image sets:

Unaligned multi-frame movies of

EMD-50623

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Raw data

carvedilol-B1AR-arrestin2-V2Rpp complex

Release date: April 30, 2025
Resolution: 6.5 Å
EM Method: Single-particle

Petrovic I, Tatli M, Desai S, Grahl A, Ni D, Stahlberg H, Spang A, Grzesiek S, Abiko LA

PNAS (2025) 122 pp. e2501487122-e2501487122 [ Pubmed: 40372433 DOI: doi:10.1073/pnas.2501487122 ]

EMPIAR-11812

Related EMDB

Structure of 4R2N ClearTau

Release date: Feb. 4, 2025
Dataset size: 8.4 TB
Experiment type: EMDB

Limorenko G, Tatli M, Kolla R, Nazarov S, Weil MT, Schöndorf DC, Geist D, Reinhardt P, Ehrnhoefer DE, Stahlberg H, Gasparini L, Lashuel HA

Nat Commun (2023) 14 [ Pubmed: 37402718 DOI: 10.1038/s41467-023-39314-7 ]

Image sets:

Unaligned multi-frame micrographs of ClearTau 4R2N isoform

EMD-50023

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3D View

mouse alpha-synuclein

Release date: Nov. 13, 2024
Resolution: 2.9 Å
EM Method: Helical reconstruction
Fitted PDBs: 9ewv
Q-score: 0.447

Sokratian A, Zhou Y, Tatli M, Burbidge KJ, Xu E, Viverette E, Donzelli S, Duda AM, Yuan Y, Li H, Strader S, Patel N, Shiell L, Malankhanova T, Chen O, Mazzulli JR, Perera L, Stahlberg H, Borgnia M, Bartesaghi A, Lashuel HA, West AB

Sci Adv (2024) 10 pp. eadq3539-eadq3539 [ Pubmed: 39485845 DOI: doi:10.1126/sciadv.adq3539 ]

EMD-42294

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Structure of recombinantly assembled murine alpha-synuclein fibrils

Release date: Oct. 9, 2024
Resolution: 3.1 Å
EM Method: Helical reconstruction
Fitted PDBs: 8uie
Q-score: 0.313

Sci Adv (2024) 10 pp. eadq3539-eadq3539 [ Pubmed: 39485845 DOI: doi:10.1126/sciadv.adq3539 ]

Sort by: Download

Showing 1 - 10 of 24. Page 1 of 3

Display:

Statistics

Download

Select database:

EMDB [17]
EMPIAR [7]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

Download

Filter By

Current Database

Current status

Sample type

Organism

EM Method

Resolution

Model molecular weight

Release Date

Author by name

Tatli M [24]
Medalia O [17]
Kronenberg-tenga R [8]
Bayer EA [7]
Mizrahi I [7]
Brignole EJ [6]
Dasso M [6]
Dip PV [6]
Lytton-jean AKR [6]
Mankus D [6]
Morais S [6]
Regmi SG [6]
Schuller AP [6]
Schwartz TU [6]
Weis K [6]
Wojtynek M [6]
Amit I [5]
Becher D [5]
Levin L [5]
Lisibach M [5]
Pfister B [5]
Simoni S [5]
Stahlberg H [5]
Todtli P [5]
Tovar-herrera O [5]
Trautwein-schult A [5]
Wimmer BH [5]
Zalk R [5]
Eibauer M [4]
Lashuel HA [3]
Abiko LA [2]
Bartesaghi A [2]
Bonne G [2]
Borgnia M [2]
Burbidge KJ [2]
Chen O [2]
Chung WL [2]
Desai S [2]
Donzelli S [2]
Duda AM [2]
Ehrnhoefer DE [2]
Gasparini L [2]
Geist D [2]
Grzesiek S [2]
Kolla R [2]
Li H [2]
Malankhanova T [2]
Martins B [2]
Mazzulli JR [2]
Nazarov S [2]
Patel N [2]
Perera L [2]
Petrovic I [2]
Reinhardt P [2]
Schondorf DC [2]
Shiell L [2]
Shin JY [2]
Sokratian A [2]
Sorrentino S [2]
Spang A [2]
Strader S [2]
Tovar-herrera OE [2]
Viverette E [2]
Weil MT [2]
West AB [2]
Worman HJ [2]
Wu W [2]
Xu E [2]
Yuan Y [2]
Zhou Y [2]
Bomble Y [1]
Bomble YJ [1]
Grahl A [1]
Limorenko G [1]
Moraïs S [1]
Ni D [1]

Author by ORCID

Medalia O [8]
Tatli M [8]
Mizrahi I [6]
Morais S [6]
Tovar-herrera O [5]
Bayer EA [5]
Pfister B [5]
Wimmer BH [5]
Trautwein-schult A [5]
Zalk R [5]
Lisibach M [5]
Weis K [4]
Schwartz TU [4]
Stahlberg H [4]
Dip PV [4]
Lytton-jean AKR [4]
Wojtynek M [4]
Dasso M [4]
Mankus D [4]
Lashuel HA [3]
Eibauer M [3]
Sokratian A [2]
Borgnia M [2]
Zhou Y [2]
Bonne G [2]
West AB [2]
Bartesaghi A [2]
Mazzulli JR [2]
Duda AM [2]
Perera L [2]
Xu E [2]
Strader S [2]
Kronenberg-tenga R [2]
Chen O [2]
Li H [2]
Patel N [2]
Shiell L [2]
Bomble YJ [1]
Spang A [1]
Chung WL [1]
Grzesiek S [1]
Gasparini L [1]
Petrovic I [1]
Desai S [1]

Journal

Software

Microscope

Electron Source

Film or detector model

EMPIAR Experiment type

EMPIAR Image category

External links