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author:"Sousa JS"

Filter By

Current Database

  • EMDB [12]

Current status

  • REL [12]

Sample type

  • Complex [12]
  • Ligand [9]
  • Protein [9]
  • DNA [1]

Organism

  • Bacillus subtilis [3]
  • Escherichia coli [3]
  • Bos taurus [3]
  • Schizosaccharomyces pombe [1]
  • Synthetic construct [1]
  • Schizosaccharomyces pombe [1]
  • Rhodothermus marinus [1]

EM Method

  • Single-particle [12]

Resolution

  • ≥ 3Å and < 4Å [8]
  • ≥ 8Å and < 12Å [3]
  • ≥ 20Å and < 30Å [1]

Model molecular weight

  • 100-250 kDa [3]
  • 250-500 kDa [4]
  • 500-1000 kDa [1]
  • 1-2 MDa [1]

Release Date

  • 2025 [3]
  • 2023 [2]
  • 2020 [3]
  • 2018 [1]
  • 2016 [3]

Author by name

  • Sousa JS [12]
  • Vonck J [7]
  • Mills DJ [5]
  • Adams C [3]
  • Ahdash Z [3]
  • Athar M [3]
  • Corey RA [3]
  • Durrant O [3]
  • Hanelt I [3]
  • Keevil CW [3]
  • Lawrence R [3]
  • Lellman S [3]
  • Mcmillan D [3]
  • Patel N [3]
  • Prosser C [3]
  • Reading E [3]
  • Stansfeld PJ [3]
  • Sutton L [3]
  • Tascon I [3]
  • Uddin MR [3]
  • Vargiu AV [3]
  • Zgurskaya HI [3]
  • Chen ZA [2]
  • Costa A [2]
  • Eickhoff P [2]
  • Flynn HR [2]
  • Fuss MF [2]
  • Hellmich Y [2]
  • Higashi TL [2]
  • Kuehlbrandt W [2]
  • Kuhlbrandt W [2]
  • Locke J [2]
  • Nans A [2]
  • O Reilly Fj [2]
  • O Reilly N [2]
  • Papageorgiou G [2]
  • Rappsilber J [2]
  • Snijders AP [2]
  • Uhlmann F [2]
  • Wieferig JP [2]
  • Aumuller N [1]
  • Calisto F [1]
  • Griwatz D [1]
  • Langer JD [1]
  • Mikusevic V [1]
  • Pereira MM [1]
  • Refojo PN [1]
  • Teixeira M [1]

Author by ORCID

  • Vonck J [7]
  • Mills DJ [5]
  • Athar M [3]
  • Reading E [3]
  • Stansfeld PJ [3]
  • Zgurskaya HI [3]
  • Lellman S [3]
  • Uddin MR [3]
  • Ahdash Z [3]
  • Lawrence R [3]
  • Hanelt I [3]
  • Corey RA [3]
  • Keevil CW [3]
  • Tascon I [3]
  • Durrant O [3]
  • Vargiu AV [3]
  • Sutton L [3]
  • Flynn HR [2]
  • Locke J [2]
  • Kuehlbrandt W [2]
  • Kuhlbrandt W [2]
  • Nans A [2]
  • Snijders AP [2]
  • Hellmich Y [2]
  • Fuss MF [2]
  • Papageorgiou G [2]
  • Eickhoff P [2]
  • Calisto F [1]
  • Refojo PN [1]
  • Griwatz D [1]
  • Langer JD [1]
  • Mikusevic V [1]
  • Pereira MM [1]
  • Teixeira M [1]

Journal

  • BIORXIV [5]
  • NAT COMMUN [4]
  • ELIFE [3]
  • MOL CELL [2]

Software

  • RELION [10]
  • CTFFIND [5]
  • CRYOSPARC [2]

Microscope

  • FEI TITAN KRIOS [5]
  • FEI POLARA 300 [3]
  • TFS GLACIOS [3]
  • FEI TECNAI SPIRIT [1]

Electron Source

  • FIELD EMISSION GUN [11]
  • LAB6 [1]

Film or detector model

  • OTHER [3]
  • FEI FALCON III 4K X 4K [2]
  • FEI FALCON IV 4K X 4K [2]
  • GATAN K2 SUMMIT 4K X 4K [2]
  • GATAN K3 BIOQUANTUM 6K X 4K [2]
  • GATAN ULTRASCAN 1000 2K X 2K [1]

External links

  • ChEBI [9]
  • PDB [9]
  • UniProt [9]
  • AlphaFold DB [8]
  • Gene Ontology [8]
  • InterPro [8]
  • Pfam [8]
  • ChEMBL [7]
  • PDBe-Kb [5]
  • DrugBank [4]
  • Complex Portal [1]
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Showing 1 - 10 of 12. Page 1 of 2
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EMD-53281
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Single particle cryo-EM structure of the multidrug efflux pump MdtF from Escherichia coli
Release date: May 14, 2025
Resolution: 3.56 Å
EM Method: Single-particle
Fitted PDBs: 9qpr
Q-score: 0.528

Lawrence R, Athar M, Uddin MR, Adams C, Sousa JS, Durrant O, Lellman S, Sutton L, Keevil CW, Patel N, Prosser C, McMillan D, Zgurskaya HI, Vargiu AV, Ahdash Z, Reading E

bioRxiv (2025) [ DOI: doi:10.1101/2025.04.04.646765 Pubmed: 40236129 ]

EMD-53282
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Single particle cryo-EM structure of MdtF V610F
Release date: May 14, 2025
Resolution: 3.28 Å
EM Method: Single-particle
Fitted PDBs: 9qps
Q-score: 0.554

Lawrence R, Athar M, Uddin MR, Adams C, Sousa JS, Durrant O, Lellman S, Sutton L, Keevil CW, Patel N, Prosser C, McMillan D, Zgurskaya HI, Vargiu AV, Ahdash Z, Reading E

bioRxiv (2025) [ DOI: doi:10.1101/2025.04.04.646765 Pubmed: 40236129 ]

EMD-53283
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Single particle cryo-EM structure of MdtF V610F with bound Rhodamine 6G
Release date: May 14, 2025
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 9qpt
Q-score: 0.553

Lawrence R, Athar M, Uddin MR, Adams C, Sousa JS, Durrant O, Lellman S, Sutton L, Keevil CW, Patel N, Prosser C, McMillan D, Zgurskaya HI, Vargiu AV, Ahdash Z, Reading E

bioRxiv (2025) [ DOI: doi:10.1101/2025.04.04.646765 Pubmed: 40236129 ]

EMD-15894
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KimA from B. subtilis with nucleotide second-messenger c-di-AMP bound
Release date: Jan. 18, 2023
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8b70
Q-score: 0.536

Fuss MF, Wieferig JP, Corey RA, Hellmich Y, Tascon I, Sousa JS, Stansfeld PJ, Vonck J, Hanelt I

Nat Commun (2023) 14 pp. 3683-3683 [ DOI: doi:10.1038/s41467-023-38944-1 Pubmed: 37344476 ]

EMD-15895
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Upright KimA dimer with bound c-di-AMP from B. subtilis
Release date: Jan. 18, 2023
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 8b71
Q-score: 0.457

Fuss MF, Wieferig JP, Corey RA, Hellmich Y, Tascon I, Sousa JS, Stansfeld PJ, Vonck J, Hanelt I

Nat Commun (2023) 14 pp. 3683-3683 [ DOI: doi:10.1038/s41467-023-38944-1 Pubmed: 37344476 ]

EMD-10870
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Cohesin complex with loader gripping DNA
Release date: Aug. 19, 2020
Resolution: 27.0 Å
EM Method: Single-particle

Higashi TL, Eickhoff P, Sousa JS, Locke J, Nans A, Flynn HR, Snijders AP, Papageorgiou G, O'Reilly N, Chen ZA, O'Reilly FJ, Rappsilber J, Costa A, Uhlmann F

Mol Cell (2020) 79 pp. 917-933.e9 [ DOI: doi:10.1016/j.molcel.2020.07.013 Pubmed: 32755595 ]

EMD-10930
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Cohesin complex with loader gripping DNA
Release date: Aug. 19, 2020
Resolution: 3.94 Å
EM Method: Single-particle
Fitted PDBs: 6yuf
Q-score: 0.348

Higashi TL, Eickhoff P, Sousa JS, Locke J, Nans A, Flynn HR, Snijders AP, Papageorgiou G, O'Reilly N, Chen ZA, O'Reilly FJ, Rappsilber J, Costa A, Uhlmann F

Mol Cell (2020) 79 pp. 917- [ DOI: doi:10.1016/j.molcel.2020.07.013 Pubmed: 32755595 ]

EMD-10092
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KimA from Bacillus subtilis in inward-facing, occluded state
Release date: Feb. 12, 2020
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 6s3k
Q-score: 0.423

Tascon I, Sousa JS, Corey RA, Mills DJ, Griwatz D, Aumuller N, Mikusevic V, Stansfeld PJ, Vonck J, Hanelt I

Nat Commun (2020) 11 pp. 626-626 [ DOI: doi:10.1038/s41467-020-14441-7 Pubmed: 32005818 ]

EMD-4165
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Alternative complex III
Release date: May 9, 2018
Resolution: 3.87 Å
EM Method: Single-particle
Fitted PDBs: 6f0k
Q-score: 0.38

Sousa JS, Calisto F, Langer JD, Mills DJ, Refojo PN, Teixeira M, Kuhlbrandt W, Vonck J, Pereira MM

Nat Commun (2018) 9 pp. 1728-1728 [ DOI: doi:10.1038/s41467-018-04141-8 Pubmed: 29712914 ]

EMD-4107
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Cryo-EM of bovine respirasome
Release date: Nov. 30, 2016
Resolution: 9.1 Å
EM Method: Single-particle
Fitted PDBs: 5luf
Q-score: 0.116

Sousa JS, Mills DJ, Vonck J, Kuhlbrandt W

eLife (2016) 5 [ DOI: doi:10.7554/eLife.21290 Pubmed: 27830641 ]

Sort by: Download
Showing 1 - 10 of 12. Page 1 of 2
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [12]

Current status

  • REL [12]

Sample type

  • Complex [12]
  • Ligand [9]
  • Protein [9]
  • DNA [1]

Organism

  • Bacillus subtilis [3]
  • Escherichia coli [3]
  • Bos taurus [3]
  • Schizosaccharomyces pombe [1]
  • Synthetic construct [1]
  • Schizosaccharomyces pombe [1]
  • Rhodothermus marinus [1]

EM Method

  • Single-particle [12]

Resolution

  • ≥ 3Å and < 4Å [8]
  • ≥ 8Å and < 12Å [3]
  • ≥ 20Å and < 30Å [1]

Model molecular weight

  • 100-250 kDa [3]
  • 250-500 kDa [4]
  • 500-1000 kDa [1]
  • 1-2 MDa [1]

Release Date

  • 2025 [3]
  • 2023 [2]
  • 2020 [3]
  • 2018 [1]
  • 2016 [3]

Author by name

  • Sousa JS [12]
  • Vonck J [7]
  • Mills DJ [5]
  • Adams C [3]
  • Ahdash Z [3]
  • Athar M [3]
  • Corey RA [3]
  • Durrant O [3]
  • Hanelt I [3]
  • Keevil CW [3]
  • Lawrence R [3]
  • Lellman S [3]
  • Mcmillan D [3]
  • Patel N [3]
  • Prosser C [3]
  • Reading E [3]
  • Stansfeld PJ [3]
  • Sutton L [3]
  • Tascon I [3]
  • Uddin MR [3]
  • Vargiu AV [3]
  • Zgurskaya HI [3]
  • Chen ZA [2]
  • Costa A [2]
  • Eickhoff P [2]
  • Flynn HR [2]
  • Fuss MF [2]
  • Hellmich Y [2]
  • Higashi TL [2]
  • Kuehlbrandt W [2]
  • Kuhlbrandt W [2]
  • Locke J [2]
  • Nans A [2]
  • O Reilly Fj [2]
  • O Reilly N [2]
  • Papageorgiou G [2]
  • Rappsilber J [2]
  • Snijders AP [2]
  • Uhlmann F [2]
  • Wieferig JP [2]
  • Aumuller N [1]
  • Calisto F [1]
  • Griwatz D [1]
  • Langer JD [1]
  • Mikusevic V [1]
  • Pereira MM [1]
  • Refojo PN [1]
  • Teixeira M [1]

Author by ORCID

  • Vonck J [7]
  • Mills DJ [5]
  • Athar M [3]
  • Reading E [3]
  • Stansfeld PJ [3]
  • Zgurskaya HI [3]
  • Lellman S [3]
  • Uddin MR [3]
  • Ahdash Z [3]
  • Lawrence R [3]
  • Hanelt I [3]
  • Corey RA [3]
  • Keevil CW [3]
  • Tascon I [3]
  • Durrant O [3]
  • Vargiu AV [3]
  • Sutton L [3]
  • Flynn HR [2]
  • Locke J [2]
  • Kuehlbrandt W [2]
  • Kuhlbrandt W [2]
  • Nans A [2]
  • Snijders AP [2]
  • Hellmich Y [2]
  • Fuss MF [2]
  • Papageorgiou G [2]
  • Eickhoff P [2]
  • Calisto F [1]
  • Refojo PN [1]
  • Griwatz D [1]
  • Langer JD [1]
  • Mikusevic V [1]
  • Pereira MM [1]
  • Teixeira M [1]

Journal

  • BIORXIV [5]
  • NAT COMMUN [4]
  • ELIFE [3]
  • MOL CELL [2]

Software

  • RELION [10]
  • CTFFIND [5]
  • CRYOSPARC [2]

Microscope

  • FEI TITAN KRIOS [5]
  • FEI POLARA 300 [3]
  • TFS GLACIOS [3]
  • FEI TECNAI SPIRIT [1]

Electron Source

  • FIELD EMISSION GUN [11]
  • LAB6 [1]

Film or detector model

  • OTHER [3]
  • FEI FALCON III 4K X 4K [2]
  • FEI FALCON IV 4K X 4K [2]
  • GATAN K2 SUMMIT 4K X 4K [2]
  • GATAN K3 BIOQUANTUM 6K X 4K [2]
  • GATAN ULTRASCAN 1000 2K X 2K [1]

External links

  • ChEBI [9]
  • PDB [9]
  • UniProt [9]
  • AlphaFold DB [8]
  • Gene Ontology [8]
  • InterPro [8]
  • Pfam [8]
  • ChEMBL [7]
  • PDBe-Kb [5]
  • DrugBank [4]
  • Complex Portal [1]