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author:"Sim SI"

Filter By

Current Database

  • EMDB [19]

Current status

  • REL [19]

Sample type

  • Complex [19]
  • Protein [19]
  • Ligand [15]

Organism

  • Homo sapiens [12]
  • Saccharomyces cerevisiae [7]
  • Saccharomyces cerevisiae [5]
  • Mus musculus [2]

EM Method

  • Single-particle [19]

Resolution

  • ≥ 2Å and < 3Å [9]
  • ≥ 3Å and < 4Å [10]

Model molecular weight

  • 100-250 kDa [15]

Release Date

  • 2023 [2]
  • 2021 [12]
  • 2020 [5]

Author by name

  • Park E [19]
  • Sim SI [19]
  • Hummer G [12]
  • Von Bulow S [12]
  • Harper JW [5]
  • Mckenna MJ [5]
  • Ordureau A [5]
  • Shao S [5]
  • Wei L [5]
  • Chen Y [2]
  • Gumbart JC [2]
  • Lynch DL [2]

Author by ORCID

  • Park E [19]
  • Sim SI [19]
  • Hummer G [12]
  • Wei L [5]
  • Ordureau A [5]
  • Harper JW [5]
  • Mckenna MJ [5]
  • Shao S [5]
  • Gumbart JC [2]

Journal

  • MOL CELL [12]
  • SCIENCE [5]
  • NATURE [2]

Software

  • CRYOSPARC [19]
  • WARP [5]

Microscope

  • FEI TITAN KRIOS [16]
  • FEI TALOS ARCTICA [3]

Electron Source

  • FIELD EMISSION GUN [19]

Film or detector model

  • GATAN K3 6K X 4K [19]

External links

  • AlphaFold DB [19]
  • UniProt [19]
  • PDBe-Kb [18]
  • ChEBI [15]
  • PDB [15]
  • DrugBank [12]
  • Gene Ontology [12]
  • InterPro [12]
  • Pfam [12]
  • ChEMBL [10]
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Showing 1 - 10 of 19. Page 1 of 2
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EMD-27825
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3D View
Cryo-EM structure of the endogenous core TIM23 complex from S. cerevisiae
Release date: June 21, 2023
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8e1m
Q-score: 0.542

Sim SI, Chen Y, Lynch DL, Gumbart JC, Park E

Nature (2023) 621 pp. 620-626 [ Pubmed: 37344598 DOI: doi:10.1038/s41586-023-06239-6 ]

EMD-40346
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3D View
Cryo-EM structure of the core TIM23 complex from S. cerevisiae
Release date: June 21, 2023
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 8scx
Q-score: 0.567

Sim SI, Chen Y, Lynch DL, Gumbart JC, Park E

Nature (2023) 621 pp. 620-626 [ Pubmed: 37344598 DOI: doi:10.1038/s41586-023-06239-6 ]

EMD-24212
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3D View
Cryo-EM structure of ATP13A2 in the E2-Pi state
Release date: Nov. 10, 2021
Resolution: 3.7 Å
EM Method: Single-particle

Sim SI, von Bulow S, Hummer G, Park E

Mol Cell (2021) 81 pp. 4635-4649.e8 [ DOI: doi:10.1016/j.molcel.2021.08.017 Pubmed: 34715013 ]

EMD-24213
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3D View
Cryo-EM structure of ATP13A2 in the E2-Pi state
Release date: Nov. 10, 2021
Resolution: 3.2 Å
EM Method: Single-particle

Sim SI, von Bulow S, Hummer G, Park E

Mol Cell (2021) 81 pp. 4635-4649.e8 [ DOI: doi:10.1016/j.molcel.2021.08.017 Pubmed: 34715013 ]

EMD-24214
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3D View
Cryo-EM structure of ATP13A2 in the BeF-bound E2P-like state
Release date: Nov. 10, 2021
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 7n70
Q-score: 0.555

Sim SI, von Bulow S, Hummer G, Park E

Mol Cell (2021) 81 pp. 4635-4649.e8 [ DOI: doi:10.1016/j.molcel.2021.08.017 Pubmed: 34715013 ]

EMD-24215
Download Map
3D View
Cryo-EM structure of ATP13A2 in the E2-Pi state
Release date: Nov. 10, 2021
Resolution: 3.1 Å
EM Method: Single-particle

Sim SI, von Bulow S, Hummer G, Park E

Mol Cell (2021) 81 pp. 4635-4649.e8 [ DOI: doi:10.1016/j.molcel.2021.08.017 Pubmed: 34715013 ]

EMD-24216
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3D View
Cryo-EM structure of ATP13A2 in the AlF-bound E2-Pi-like state
Release date: Nov. 10, 2021
Resolution: 2.8 Å
EM Method: Single-particle

Sim SI, von Bulow S, Hummer G, Park E

Mol Cell (2021) 81 pp. 4635-4649.e8 [ DOI: doi:10.1016/j.molcel.2021.08.017 Pubmed: 34715013 ]

EMD-24217
Download Map
3D View
Cryo-EM structure of ATP13A2 in the AlF-bound E2-Pi-like state
Release date: Nov. 10, 2021
Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 7n72
Q-score: 0.572

Sim SI, von Bulow S, Hummer G, Park E

Mol Cell (2021) 81 pp. 4635-4649.e8 [ DOI: doi:10.1016/j.molcel.2021.08.017 Pubmed: 34715013 ]

EMD-24218
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Cryo-EM structure of ATP13A2 in the ADP-AlF-bound E1P-ADP-like state
Release date: Nov. 10, 2021
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 7n73
Q-score: 0.541

Sim SI, von Bulow S, Hummer G, Park E

Mol Cell (2021) 81 pp. 4635-4649.e8 [ DOI: doi:10.1016/j.molcel.2021.08.017 Pubmed: 34715013 ]

EMD-24219
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3D View
Cryo-EM structure of ATP13A2 D508N mutant in the E1-ATP-like state
Release date: Nov. 10, 2021
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 7n74
Q-score: 0.534

Sim SI, von Bulow S, Hummer G, Park E

Mol Cell (2021) 81 pp. 4635-4649.e8 [ DOI: doi:10.1016/j.molcel.2021.08.017 Pubmed: 34715013 ]

Sort by: Download
Showing 1 - 10 of 19. Page 1 of 2
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [19]

Current status

  • REL [19]

Sample type

  • Complex [19]
  • Protein [19]
  • Ligand [15]

Organism

  • Homo sapiens [12]
  • Saccharomyces cerevisiae [7]
  • Saccharomyces cerevisiae [5]
  • Mus musculus [2]

EM Method

  • Single-particle [19]

Resolution

  • ≥ 2Å and < 3Å [9]
  • ≥ 3Å and < 4Å [10]

Model molecular weight

  • 100-250 kDa [15]

Release Date

  • 2023 [2]
  • 2021 [12]
  • 2020 [5]

Author by name

  • Park E [19]
  • Sim SI [19]
  • Hummer G [12]
  • Von Bulow S [12]
  • Harper JW [5]
  • Mckenna MJ [5]
  • Ordureau A [5]
  • Shao S [5]
  • Wei L [5]
  • Chen Y [2]
  • Gumbart JC [2]
  • Lynch DL [2]

Author by ORCID

  • Park E [19]
  • Sim SI [19]
  • Hummer G [12]
  • Wei L [5]
  • Ordureau A [5]
  • Harper JW [5]
  • Mckenna MJ [5]
  • Shao S [5]
  • Gumbart JC [2]

Journal

  • MOL CELL [12]
  • SCIENCE [5]
  • NATURE [2]

Software

  • CRYOSPARC [19]
  • WARP [5]

Microscope

  • FEI TITAN KRIOS [16]
  • FEI TALOS ARCTICA [3]

Electron Source

  • FIELD EMISSION GUN [19]

Film or detector model

  • GATAN K3 6K X 4K [19]

External links

  • AlphaFold DB [19]
  • UniProt [19]
  • PDBe-Kb [18]
  • ChEBI [15]
  • PDB [15]
  • DrugBank [12]
  • Gene Ontology [12]
  • InterPro [12]
  • Pfam [12]
  • ChEMBL [10]