Electron Microscopy Data Bank

Happy Holidays and New year from the EMDB! Please be advised that the EMDB team will be operating at reduced capacity between December 15th - January 12th. With this in mind we would ask that you be prepared for longer reply times through both our helpdesk system and the OneDep deposition system. well done on a productive 2025, wishing you all the best and we will see you in 2026!

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author:"Potter CS"

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Current Database

Current status

Sample type

Organism

Homo sapiens [75]
Mus musculus [59]
Escherichia coli [59]
Rattus norvegicus [24]
Saccharomyces cerevisiae [24]
Human immunodeficiency virus 1 [19]
(no species) [17]
Oryctolagus cuniculus [11]
Escherichia coli [6]
Pseudomonas phage pp7 [5]
Streptomyces avidinii [5]
Escherichia phage lambda [5]
Macaca mulatta [5]
Human papillomavirus [4]
Influenza a virus [4]
Thermoplasma acidophilum [4]
Tabanus atratus [3]
Ovis aries [3]
Adeno-associated dependoparvovirus a [2]
(no species) [2]
Rotavirus a [2]
Mycobacteroides abscessus [2]
Vibrio phage sio-2 [2]
Escherichia phage lambda [1]
Salmonella phage p22 [1]
Human respirovirus 3 [1]
Mycobacteroides abscessus [1]
Nudaurelia capensis omega virus [1]
Mycolicibacterium smegmatis [1]
Mycobacterium tuberculosis [1]
Streptomyces griseus [1]
Escherichia phage ecszw-2 [1]
Mycolicibacterium smegmatis [1]
Sulfolobus turreted icosahedral virus 1 [1]
Influenza a virus [1]
Enterobacteria phage hk97 [1]
Influenza a virus [1]
Plasmodium falciparum [1]
Equus caballus [1]
Bos taurus [1]

EM Method

Resolution

Model molecular weight

Release Date

Author by name

Potter CS [383]
Carragher B [380]
Dandey VP [96]
Wei H [96]
Tan YZ [91]
Noble AJ [82]
Eng ET [77]
Zhang Z [72]
Rice WJ [70]
Shapiro L [68]
Cheng A [65]
Campbell MG [64]
Lyumkis D [60]
Brasch J [57]
Marletta MA [56]
Acharya P [52]
Kwong PD [52]
Kim LY [47]
Rapp M [44]
Scapin G [39]
Negro CJ [38]
Tan Y [37]
Chase J [36]
Jeruzalmi D [36]
Des Georges A [36]
Williamson JR [35]
Moeller A [32]
Smith BC [32]
Chua EYD [26]
Kopylov M [26]
Neselu K [26]
Wang B [26]
Joazeiro CAP [24]
Underbakke ES [24]
Bengtson MH [22]
Doamekpor SK [22]
Joazeiro CA [22]
Lee JW [22]
Lima CD [22]
Petroski MD [22]
Toro TB [22]
Davis JH [20]
Honig B [20]
Liang WG [20]
Tang WJ [20]
Noble AN [18]
Raczkowski AM [18]
Chang G [17]
Chang Lee S [17]
Speir S [17]
Tao H [17]
Urbatsch IL [17]
Zhang Q [17]
Chuang GY [16]
Beck A [15]
Beck AH [15]
Bunner A [15]
Bunner AE [15]
Lee D [15]
Li S [15]
Mascola JR [15]
Milligan RA [15]
Mulder AM [15]
Xu K [15]
Yen LY [15]
Yoshioka C [15]
Zhang B [15]
Bobe D [14]
Rawi R [14]
Zhou T [14]
Foulds KE [13]
Ou L [13]
Scorpio DG [13]
Todd JP [13]
Agard DA [12]
Ahlsen G [12]
Artley B [12]
Asuncion J [12]
Bailer RT [12]
Chen X [12]
Cheng C [12]
Choi CW [12]
Clarke OB [12]
Dan H [12]
Doria-rose NA [12]
Ermel UH [12]
Evans K [12]
Gadling J [12]
Geng H [12]
Gorman J [12]
Harrington K [12]
Harrison OJ [12]
Hutchings J [12]
Jafari AJ [12]
Johnson JE [12]
Jordan KD [12]
Kandel S [12]
Katsamba PS [12]
Khandwala K [12]
Kimanius D [12]

Author by ORCID

Carragher B [129]
Tan YZ [65]
Campbell MG [64]
Eng ET [47]
Noble AJ [44]
Acharya P [34]
Williamson JR [34]
Smith BC [32]
Moeller A [32]
Rice WJ [29]
Potter CS [27]
Kwong PD [27]
Wang B [25]
Chua EYD [25]
Underbakke ES [24]
Bengtson MH [22]
Doamekpor SK [22]
Lima CD [22]
Joazeiro CA [22]
Davis JH [19]
Jeruzalmi D [18]
Kopylov M [17]
Bunner AE [15]
Lee D [13]
Tang WJ [13]
Raczkowski AM [13]
Gorman J [12]
Lander GC [11]
Deprez-poulain R [8]
Guo Y [7]
Sarfo EK [7]
Duan H [7]
Corcoran MM [7]
Corrigan AR [7]
Mascola JR [7]
Honig B [6]
Katsamba PS [6]
Lemmin T [5]
Zhao M [5]
Saecker RM [5]
Wei H [5]
Pan M [5]
Louder MK [5]
Finn MG [5]
Stagg SM [5]
Asokan M [5]
Liu C [5]
Zhao L [5]
Grigorieff N [5]
Chen J [5]
Sheng Z [5]
Mendez JH [5]
Darst SA [5]
Giacometti SI [5]
Li S [5]
Mcdermott AB [5]
Mueller AU [5]
Liu K [5]
Mancl JM [5]
Lai YT [5]
Molina N [5]
Bepler T [4]
Julien JP [4]
Archer M [4]
Brilot AF [4]
Pan J [4]
Zhang L [4]
Kloss B [4]
Rodrigues J [4]
Clarke OB [4]
Niederweis M [4]
Lander G [4]
Fu Z [3]
Quispe J [3]
Catalao MJ [3]
Eng E [3]
Fan QR [3]
Athayde D [3]
Wang MW [2]
Gurkan C [2]
Haddox HK [2]
Dingens AS [2]
Evilevitch A [2]
De Graaf C [2]
Griffin PR [2]
Mascola JR [2]
Lapointe P [2]
Bloom JD [2]
Voss NR [2]
Joazeiro CAP [2]
Kearney BM [2]
Hernandez C [2]
Wicht KJ [1]
Fidock DA [1]
Marty MT [1]
Hagenah LM [1]
Erramilli SK [1]
Kelley K [1]
Casjens SR [1]
Liu Q [1]

Journal

Software

Microscope

Electron Source

Film or detector model

EMPIAR Experiment type

EMPIAR Image category

External links

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Showing 1 - 10 of 386. Page 1 of 39

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EMDB [327]
EMPIAR [59]

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EMD-73631

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3D View

The Kaggle CryoET Object Identification Challenge: ground truth 80S ribosome

Release date: Dec. 3, 2025
Resolution: 4.8 Å
EM Method: Subtomogram averaging

Peck A, Hutchings J, Schwartz J, Yu Y, Ermel UH, Kandel S, Kimanius D, Zhao Z, Zheng S, Artley B, List D, Silva SA, Reade W, Asuncion J, Evans K, Gadling J, Khandwala K, McCanny S, McCarthy DG, Ni JX, Pourroy J, Venkatakrishnan M, Wang ZS, Agard DA, Potter CS, Carragher B, Harrington K, Paraan M

bioRxiv (2025) [ DOI: doi:10.1101/2025.11.03.686153 ]

EMD-73633

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The Kaggle CryoET Object Identification Challenge: first place 80S ribosome

Release date: Dec. 3, 2025
Resolution: 4.7 Å
EM Method: Subtomogram averaging

bioRxiv (2025) [ DOI: doi:10.1101/2025.11.03.686153 ]

EMD-73634

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3D View

The Kaggle CryoET Object Identification Challenge: ground truth apo-ferritin

Release date: Dec. 3, 2025
Resolution: 5.0 Å
EM Method: Subtomogram averaging

bioRxiv (2025) [ DOI: doi:10.1101/2025.11.03.686153 ]

EMD-73635

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3D View

The Kaggle CryoET Object Identification Challenge: first place apo-ferritin

Release date: Dec. 3, 2025
Resolution: 6.0 Å
EM Method: Subtomogram averaging

bioRxiv (2025) [ DOI: doi:10.1101/2025.11.03.686153 ]

EMD-73636

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3D View

The Kaggle CryoET Object Identification Challenge: ground truth virus-like-particle

Release date: Dec. 3, 2025
Resolution: 5.1 Å
EM Method: Subtomogram averaging

bioRxiv (2025) [ DOI: doi:10.1101/2025.11.03.686153 ]

EMD-73637

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3D View

The Kaggle CryoET Object Identification Challenge: first place virus-like-particle

Release date: Dec. 3, 2025
Resolution: 5.4 Å
EM Method: Subtomogram averaging

bioRxiv (2025) [ DOI: doi:10.1101/2025.11.03.686153 ]

EMD-73638

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3D View

The Kaggle CryoET Object Identification Challenge: ground truth beta-galactosidase

Release date: Dec. 3, 2025
Resolution: 8.1 Å
EM Method: Subtomogram averaging

bioRxiv (2025) [ DOI: doi:10.1101/2025.11.03.686153 ]

EMD-73639

Download Map

3D View

The Kaggle CryoET Object Identification Challenge: first place beta-galactosidase

Release date: Dec. 3, 2025
Resolution: 8.3 Å
EM Method: Subtomogram averaging

bioRxiv (2025) [ DOI: doi:10.1101/2025.11.03.686153 ]

EMD-73640

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3D View

The Kaggle CryoET Object Identification Challenge: ground truth beta-amylase

Release date: Dec. 3, 2025
Resolution: 11.0 Å
EM Method: Subtomogram averaging

bioRxiv (2025) [ DOI: doi:10.1101/2025.11.03.686153 ]

EMD-73641

Download Map

3D View

The Kaggle CryoET Object Identification Challenge: first place beta-amylase

Release date: Dec. 3, 2025
Resolution: 10.6 Å
EM Method: Subtomogram averaging

bioRxiv (2025) [ DOI: doi:10.1101/2025.11.03.686153 ]

Sort by: Download

Showing 1 - 10 of 386. Page 1 of 39

Display:

Statistics

Download

Select database:

EMDB [327]
EMPIAR [59]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

Download

Filter By

Current Database

Current status

Sample type

Organism

Homo sapiens [75]
Mus musculus [59]
Escherichia coli [59]
Rattus norvegicus [24]
Saccharomyces cerevisiae [24]
Human immunodeficiency virus 1 [19]
(no species) [17]
Oryctolagus cuniculus [11]
Escherichia coli [6]
Pseudomonas phage pp7 [5]
Streptomyces avidinii [5]
Escherichia phage lambda [5]
Macaca mulatta [5]
Human papillomavirus [4]
Influenza a virus [4]
Thermoplasma acidophilum [4]
Tabanus atratus [3]
Ovis aries [3]
Adeno-associated dependoparvovirus a [2]
(no species) [2]
Rotavirus a [2]
Mycobacteroides abscessus [2]
Vibrio phage sio-2 [2]
Escherichia phage lambda [1]
Salmonella phage p22 [1]
Human respirovirus 3 [1]
Mycobacteroides abscessus [1]
Nudaurelia capensis omega virus [1]
Mycolicibacterium smegmatis [1]
Mycobacterium tuberculosis [1]
Streptomyces griseus [1]
Escherichia phage ecszw-2 [1]
Mycolicibacterium smegmatis [1]
Sulfolobus turreted icosahedral virus 1 [1]
Influenza a virus [1]
Enterobacteria phage hk97 [1]
Influenza a virus [1]
Plasmodium falciparum [1]
Equus caballus [1]
Bos taurus [1]

EM Method

Resolution

Model molecular weight

Release Date

Author by name

Potter CS [383]
Carragher B [380]
Dandey VP [96]
Wei H [96]
Tan YZ [91]
Noble AJ [82]
Eng ET [77]
Zhang Z [72]
Rice WJ [70]
Shapiro L [68]
Cheng A [65]
Campbell MG [64]
Lyumkis D [60]
Brasch J [57]
Marletta MA [56]
Acharya P [52]
Kwong PD [52]
Kim LY [47]
Rapp M [44]
Scapin G [39]
Negro CJ [38]
Tan Y [37]
Chase J [36]
Jeruzalmi D [36]
Des Georges A [36]
Williamson JR [35]
Moeller A [32]
Smith BC [32]
Chua EYD [26]
Kopylov M [26]
Neselu K [26]
Wang B [26]
Joazeiro CAP [24]
Underbakke ES [24]
Bengtson MH [22]
Doamekpor SK [22]
Joazeiro CA [22]
Lee JW [22]
Lima CD [22]
Petroski MD [22]
Toro TB [22]
Davis JH [20]
Honig B [20]
Liang WG [20]
Tang WJ [20]
Noble AN [18]
Raczkowski AM [18]
Chang G [17]
Chang Lee S [17]
Speir S [17]
Tao H [17]
Urbatsch IL [17]
Zhang Q [17]
Chuang GY [16]
Beck A [15]
Beck AH [15]
Bunner A [15]
Bunner AE [15]
Lee D [15]
Li S [15]
Mascola JR [15]
Milligan RA [15]
Mulder AM [15]
Xu K [15]
Yen LY [15]
Yoshioka C [15]
Zhang B [15]
Bobe D [14]
Rawi R [14]
Zhou T [14]
Foulds KE [13]
Ou L [13]
Scorpio DG [13]
Todd JP [13]
Agard DA [12]
Ahlsen G [12]
Artley B [12]
Asuncion J [12]
Bailer RT [12]
Chen X [12]
Cheng C [12]
Choi CW [12]
Clarke OB [12]
Dan H [12]
Doria-rose NA [12]
Ermel UH [12]
Evans K [12]
Gadling J [12]
Geng H [12]
Gorman J [12]
Harrington K [12]
Harrison OJ [12]
Hutchings J [12]
Jafari AJ [12]
Johnson JE [12]
Jordan KD [12]
Kandel S [12]
Katsamba PS [12]
Khandwala K [12]
Kimanius D [12]

Author by ORCID

Carragher B [129]
Tan YZ [65]
Campbell MG [64]
Eng ET [47]
Noble AJ [44]
Acharya P [34]
Williamson JR [34]
Smith BC [32]
Moeller A [32]
Rice WJ [29]
Potter CS [27]
Kwong PD [27]
Wang B [25]
Chua EYD [25]
Underbakke ES [24]
Bengtson MH [22]
Doamekpor SK [22]
Lima CD [22]
Joazeiro CA [22]
Davis JH [19]
Jeruzalmi D [18]
Kopylov M [17]
Bunner AE [15]
Lee D [13]
Tang WJ [13]
Raczkowski AM [13]
Gorman J [12]
Lander GC [11]
Deprez-poulain R [8]
Guo Y [7]
Sarfo EK [7]
Duan H [7]
Corcoran MM [7]
Corrigan AR [7]
Mascola JR [7]
Honig B [6]
Katsamba PS [6]
Lemmin T [5]
Zhao M [5]
Saecker RM [5]
Wei H [5]
Pan M [5]
Louder MK [5]
Finn MG [5]
Stagg SM [5]
Asokan M [5]
Liu C [5]
Zhao L [5]
Grigorieff N [5]
Chen J [5]
Sheng Z [5]
Mendez JH [5]
Darst SA [5]
Giacometti SI [5]
Li S [5]
Mcdermott AB [5]
Mueller AU [5]
Liu K [5]
Mancl JM [5]
Lai YT [5]
Molina N [5]
Bepler T [4]
Julien JP [4]
Archer M [4]
Brilot AF [4]
Pan J [4]
Zhang L [4]
Kloss B [4]
Rodrigues J [4]
Clarke OB [4]
Niederweis M [4]
Lander G [4]
Fu Z [3]
Quispe J [3]
Catalao MJ [3]
Eng E [3]
Fan QR [3]
Athayde D [3]
Wang MW [2]
Gurkan C [2]
Haddox HK [2]
Dingens AS [2]
Evilevitch A [2]
De Graaf C [2]
Griffin PR [2]
Mascola JR [2]
Lapointe P [2]
Bloom JD [2]
Voss NR [2]
Joazeiro CAP [2]
Kearney BM [2]
Hernandez C [2]
Wicht KJ [1]
Fidock DA [1]
Marty MT [1]
Hagenah LM [1]
Erramilli SK [1]
Kelley K [1]
Casjens SR [1]
Liu Q [1]

Journal

Software

Microscope

Electron Source

Film or detector model

EMPIAR Experiment type

EMPIAR Image category

External links