EMD-73631
The Kaggle CryoET Object Identification Challenge: ground truth 80S ribosome
EMD-73631
Subtomogram averaging4.8 Å
Deposition: 28/10/2025Map released: 03/12/2025
Last modified: 26/08/2026
Sample Organism:
Homo sapiens
Sample: HEK293T cell lysate mixed with purified proteins on functionalized EM grids
Deposition Authors: Peck A
,
Hutchings J ,
Schwartz J ,
Paraan M
Sample: HEK293T cell lysate mixed with purified proteins on functionalized EM grids
Deposition Authors: Peck A
,
Hutchings J ,
Schwartz J ,
Paraan M
Lessons learned from a Kaggle challenge for particle picking in cryo-electron tomography.
Peck A ,
Hutchings J ,
Schwartz J ,
Yu Y,
Ermel UH,
Kandel S,
Kimanius D,
Zhao Z,
Zheng S,
Artley B,
List D,
Silva Jr SA,
Reade W,
Asuncion J,
Evans K,
Gadling J,
Khandwala K,
McCanny S,
McCarthy DG,
Ni JX,
Pourroy J,
Venkatakrishnan M,
Wang ZS,
Agard DA,
Potter CS,
Carragher B,
Harrington KIS,
Paraan M
(2026) Nat Methods
,
Hutchings J ,
Schwartz J ,
Yu Y,
Ermel UH,
Kandel S,
Kimanius D,
Zhao Z,
Zheng S,
Artley B,
List D,
Silva Jr SA,
Reade W,
Asuncion J,
Evans K,
Gadling J,
Khandwala K,
McCanny S,
McCarthy DG,
Ni JX,
Pourroy J,
Venkatakrishnan M,
Wang ZS,
Agard DA,
Potter CS,
Carragher B,
Harrington KIS,
Paraan M
(2026) Nat Methods
Secondary citations:
- Peck A, Hutchings J, Schwartz J, Yu Y, Ermel UH, Kandel S, Kimanius D, Zhao Z, Zheng S, Artley B, List D, Silva SA, Reade W, Asuncion J, Evans K, Gadling J, Khandwala K, McCanny S, McCarthy DG, Ni JX, Pourroy J, Venkatakrishnan M, Wang ZS, Agard DA, Potter CS, Carragher B, Harrington K & Paraan M. (2025) Lessons learned from a Kaggle challenge for particle picking in cryo-electron tomography. bioRxiv,
- Peck A, Yu Y, Schwartz J, Cheng A, Ermel UH, Hutchings J, Kandel S, Kimanius D, Montabana EA, Serwas D, Siems H, Wang F, Zhao Z, Zheng S, Haury M, Agard DA, Potter CS, Carragher B, Harrington K & Paraan M. (2025) A realistic phantom dataset for benchmarking cryo-ET data annotation. Nat Methods, 22, 1819 - 1823
Grant Support:
- Chan Zuckerberg Initiative: CZII2023327779 (United States)