Edit your search query here and hit Return to execute it:
POLC

Filter By

Current Database

  • EMDB [7]

Current status

  • REL [7]

Sample type

  • Complex [7]
  • DNA [7]
  • Ligand [7]
  • Protein [7]

Organism

  • Enterococcus faecium [3]
  • Pyrococcus abyssi [3]
  • Escherichia coli [3]
  • Pyrococcus abyssi [1]

EM Method

  • Single-particle [7]

Resolution

  • ≥ 2Å and < 3Å [2]
  • ≥ 3Å and < 4Å [4]
  • ≥ 6Å and < 8Å [1]

Model molecular weight

  • 100-250 kDa [4]
  • 250-500 kDa [3]

Release Date

  • 2025 [3]
  • 2023 [3]
  • 2019 [1]

Author by name

  • Delarue M [4]
  • Sauguet L [4]
  • Barbachyn MR [3]
  • Betancurt-anzola L [3]
  • Deluccia RJ [3]
  • Friggen AH [3]
  • Gardner AF [3]
  • Lamers MH [3]
  • Martinez-carranza M [3]
  • Mortin LI [3]
  • Musch N [3]
  • Silverman MH [3]
  • Smits WK [3]
  • Swain CJ [3]
  • Urem M [3]
  • Yu X [3]
  • Zatopek KM [3]
  • Beguin P [1]
  • Brule S [1]
  • Carroni M [1]
  • Henneke G [1]
  • Henry E [1]
  • Lindahl E [1]
  • Pehau-arnaudet G [1]
  • Raia P [1]

Author by ORCID

  • Sauguet L [4]
  • Zatopek KM [3]
  • Lamers MH [3]
  • Silverman MH [3]
  • Smits WK [3]
  • Mortin LI [3]
  • Urem M [3]
  • Swain CJ [3]
  • Delarue M [3]
  • Deluccia RJ [3]
  • Musch N [3]
  • Pehau-arnaudet G [1]
  • Henry E [1]
  • Henneke G [1]
  • Carroni M [1]
  • Brule S [1]
  • Raia P [1]

Journal

  • NAT COMMUN [6]
  • PLOS BIOL [1]

Software

  • CRYOSPARC [1]

Microscope

  • TFS KRIOS [6]
  • FEI TITAN KRIOS [1]

Electron Source

  • FIELD EMISSION GUN [7]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [6]
  • GATAN K2 QUANTUM 4K X 4K [1]

External links

  • ChEBI [7]
  • ChEMBL [7]
  • DrugBank [7]
  • PDB [7]
  • UniProt [7]
  • Gene Ontology [6]
  • InterPro [6]
  • PDBe-Kb [6]
  • AlphaFold DB [4]
Sort by: Download
Showing 1 - 7 of 7. Page 1 of 1
Display:
Statistics
×

Download










































Preview first 10
Download
EMD-53270
Download Map
3D View
DNA polymerase with inhibitor
CryoEM
Release date: Sept. 24, 2025
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 9qpc
Q-score: 0.551

Urem M, Friggen AH, Musch N, Silverman MH, Swain CJ, Barbachyn MR, Mortin LI, Yu X, DeLuccia RJ, Lamers MH, Smits WK

Nat Commun (2025) 16 pp. 9784-9784 [ Pubmed: 41198680 DOI: doi:10.1038/s41467-025-65324-8 ]

EMD-53319
Download Map
3D View
DNA polymerase with inhibitor 2
CryoEM
Release date: Sept. 24, 2025
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 9qrl
Q-score: 0.492

Urem M, Friggen AH, Musch N, Silverman MH, Swain CJ, Barbachyn MR, Mortin LI, Yu X, DeLuccia RJ, Lamers MH, Smits WK

Nat Commun (2025) 16 pp. 9784-9784 [ Pubmed: 41198680 DOI: doi:10.1038/s41467-025-65324-8 ]

EMD-53320
Download Map
3D View
DNA polymerase without DNA or inhibitor
CryoEM
Release date: Sept. 24, 2025
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 9qrn
Q-score: 0.499

Urem M, Friggen AH, Musch N, Silverman MH, Swain CJ, Barbachyn MR, Mortin LI, Yu X, DeLuccia RJ, Lamers MH, Smits WK

Nat Commun (2025) 16 pp. 9784-9784 [ Pubmed: 41198680 DOI: doi:10.1038/s41467-025-65324-8 ]

EMD-17815
Download Map
3D View
Pyrococcus abyssi DNA polymerase D PolD in its editing mode bound to a primer/template substrate containing a mismatch
CryoEM
Release date: Dec. 20, 2023
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8ppt
Q-score: 0.55

Betancurt-Anzola L, Martinez-Carranza M, Delarue M, Zatopek KM, Gardner AF, Sauguet L

Nat Commun (2023) 14 pp. 8306-8306 [ DOI: doi:10.1038/s41467-023-44125-x Pubmed: 38097591 ]

EMD-17816
Download Map
3D View
Pyrococcus abyssi DNA polymerase D PolD in its editing mode bound to a primer/template substrate containing three consecutive mismatches
CryoEM
Release date: Dec. 20, 2023
Resolution: 3.02 Å
EM Method: Single-particle
Fitted PDBs: 8ppu
Q-score: 0.532

Betancurt-Anzola L, Martinez-Carranza M, Delarue M, Zatopek KM, Gardner AF, Sauguet L

Nat Commun (2023) 14 pp. 8306-8306 [ DOI: doi:10.1038/s41467-023-44125-x Pubmed: 38097591 ]

EMD-17817
Download Map
3D View
Intermediate conformer of Pyrococcus abyssi DNA polymerase D PolD bound to a primer/template substrate containing three consecutive mismatches
CryoEM
Release date: Dec. 20, 2023
Resolution: 3.02 Å
EM Method: Single-particle
Fitted PDBs: 8ppv
Q-score: 0.547

Betancurt-Anzola L, Martinez-Carranza M, Delarue M, Zatopek KM, Gardner AF, Sauguet L

Nat Commun (2023) 14 pp. 8306-8306 [ DOI: doi:10.1038/s41467-023-44125-x Pubmed: 38097591 ]

EMD-0244
Download Map
3D View
Cryo-EM map of DNA polymerase D from Pyrococcus abyssi in complex with DNA
CryoEM
Release date: Jan. 30, 2019
Resolution: 7.1 Å
EM Method: Single-particle
Fitted PDBs: 6hms
Q-score: 0.146

Raia P, Carroni M, Henry E, Pehau-Arnaudet G, Brule S, Beguin P, Henneke G, Lindahl E, Delarue M, Sauguet L

PLoS Biol (2019) 17 pp. e3000122-e3000122 [ Pubmed: 30657780 DOI: doi:10.1371/journal.pbio.3000122 ]

Sort by: Download
Showing 1 - 7 of 7. Page 1 of 1
Display:
Statistics
×

Download










































Preview first 10
Download

Filter By

Current Database

  • EMDB [7]

Current status

  • REL [7]

Sample type

  • Complex [7]
  • DNA [7]
  • Ligand [7]
  • Protein [7]

Organism

  • Enterococcus faecium [3]
  • Pyrococcus abyssi [3]
  • Escherichia coli [3]
  • Pyrococcus abyssi [1]

EM Method

  • Single-particle [7]

Resolution

  • ≥ 2Å and < 3Å [2]
  • ≥ 3Å and < 4Å [4]
  • ≥ 6Å and < 8Å [1]

Model molecular weight

  • 100-250 kDa [4]
  • 250-500 kDa [3]

Release Date

  • 2025 [3]
  • 2023 [3]
  • 2019 [1]

Author by name

  • Delarue M [4]
  • Sauguet L [4]
  • Barbachyn MR [3]
  • Betancurt-anzola L [3]
  • Deluccia RJ [3]
  • Friggen AH [3]
  • Gardner AF [3]
  • Lamers MH [3]
  • Martinez-carranza M [3]
  • Mortin LI [3]
  • Musch N [3]
  • Silverman MH [3]
  • Smits WK [3]
  • Swain CJ [3]
  • Urem M [3]
  • Yu X [3]
  • Zatopek KM [3]
  • Beguin P [1]
  • Brule S [1]
  • Carroni M [1]
  • Henneke G [1]
  • Henry E [1]
  • Lindahl E [1]
  • Pehau-arnaudet G [1]
  • Raia P [1]

Author by ORCID

  • Sauguet L [4]
  • Zatopek KM [3]
  • Lamers MH [3]
  • Silverman MH [3]
  • Smits WK [3]
  • Mortin LI [3]
  • Urem M [3]
  • Swain CJ [3]
  • Delarue M [3]
  • Deluccia RJ [3]
  • Musch N [3]
  • Pehau-arnaudet G [1]
  • Henry E [1]
  • Henneke G [1]
  • Carroni M [1]
  • Brule S [1]
  • Raia P [1]

Journal

  • NAT COMMUN [6]
  • PLOS BIOL [1]

Software

  • CRYOSPARC [1]

Microscope

  • TFS KRIOS [6]
  • FEI TITAN KRIOS [1]

Electron Source

  • FIELD EMISSION GUN [7]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [6]
  • GATAN K2 QUANTUM 4K X 4K [1]

External links

  • ChEBI [7]
  • ChEMBL [7]
  • DrugBank [7]
  • PDB [7]
  • UniProt [7]
  • Gene Ontology [6]
  • InterPro [6]
  • PDBe-Kb [6]
  • AlphaFold DB [4]