Koenders2015 - multiple myeloma

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Model Identifier
BIOMD0000000804
Short description
The paper describes a model of multiple myeloma. Created by COPASI 4.26 (Build 213) This model is described in the article: A mathematical model of cell equilibrium and joint cell formation in multiple myeloma M.A. Koenders, R. Saso Journal of Theoretical Biology 390 (2016) 73–79 Abstract: In Multiple Myeloma Bone Disease healthy bone remodelling is affected by tumour cells by means of paracrine cytokinetic signalling in such a way that osteoclast formation is enhanced and the growth of osteoblast cells inhibited. The participating cytokines are described in the literature. Osteoclast-induced myeloma cell growth is also reported. Based on existing mathematical models for healthy bone remo- delling a three-way equilibrium model is presented for osteoclasts, osteoblasts and myeloma cell populations to describe the progress of the illness in a scenario in which there is a secular increase in the cytokinetic interactive effectiveness of paracrine processes. The equilibrium state for the system is obtained. The paracrine interactive effectiveness is explored by parameter variation and the stable region in the parameter space is identified. Then recently-discovered joint myeloma–osteoclast cells are added to the model to describe the populations inside lytic lesions. It transpires that their presence expands the available parameter space for stable equilibrium, thus permitting a detrimental, larger population of osteoclasts and myeloma cells. A possible relapse mechanism for the illness is explored by letting joint cells dissociate. The mathematics then permits the evaluation of the evolution of the cell populations as a function of time during relapse. To cite BioModels Database, please use: BioModels Database: An enhanced, curated and annotated resource for published quantitative kinetic models . To the extent possible under law, all copyright and related or neighbouring rights to this encoded model have been dedicated to the public domain worldwide. Please refer to CC0 Public Domain Dedication for more information.
Format
SBML (L3V1)
Related Publication
  • A mathematical model of cell equilibrium and joint cell formation in multiple myeloma.
  • Koenders MA, Saso R
  • Journal of theoretical biology , 2/ 2016 , Volume 390 , pages: 73-79 , PubMed ID: 26643942
  • Department Engineering and The Environment, University of Southampton, Highfield, Southampton SO17 1BJ, UK. Electronic address: c_koenders@yahoo.com.
  • In Multiple Myeloma Bone Disease healthy bone remodelling is affected by tumour cells by means of paracrine cytokinetic signalling in such a way that osteoclast formation is enhanced and the growth of osteoblast cells inhibited. The participating cytokines are described in the literature. Osteoclast-induced myeloma cell growth is also reported. Based on existing mathematical models for healthy bone remodelling a three-way equilibrium model is presented for osteoclasts, osteoblasts and myeloma cell populations to describe the progress of the illness in a scenario in which there is a secular increase in the cytokinetic interactive effectiveness of paracrine processes. The equilibrium state for the system is obtained. The paracrine interactive effectiveness is explored by parameter variation and the stable region in the parameter space is identified. Then recently-discovered joint myeloma-osteoclast cells are added to the model to describe the populations inside lytic lesions. It transpires that their presence expands the available parameter space for stable equilibrium, thus permitting a detrimental, larger population of osteoclasts and myeloma cells. A possible relapse mechanism for the illness is explored by letting joint cells dissociate. The mathematics then permits the evaluation of the evolution of the cell populations as a function of time during relapse.
Contributors
Submitter of the first revision: Jinghao Men
Submitter of this revision: Jinghao Men
Modellers: Jinghao Men

Metadata information

is (2 statements)
BioModels Database BIOMD0000000804
BioModels Database MODEL1908290002

isDescribedBy (1 statement)
PubMed 26643942

hasTaxon (1 statement)
Taxonomy Homo sapiens

hasProperty (2 statements)
Mathematical Modelling Ontology Ordinary differential equation model
Experimental Factor Ontology multiple myeloma


Curation status
Curated


Tags

Connected external resources

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Model files

Koenders2015.xml SBML L3V1 representation of multiple myeloma model 60.92 KB Preview | Download

Additional files

Koenders2015.cps CPS file of the model in COPASI 76.37 KB Preview | Download
Koenders2015.sedml Auto-generated SEDML file 2.77 KB Preview | Download

  • Model originally submitted by : Jinghao Men
  • Submitted: Aug 29, 2019 4:23:40 PM
  • Last Modified: Aug 29, 2019 4:23:40 PM
Revisions
  • Version: 3 public model Download this version
    • Submitted on: Aug 29, 2019 4:23:40 PM
    • Submitted by: Jinghao Men
    • With comment: Automatically added model identifier BIOMD0000000804
Legends
: Variable used inside SBML models


Species
Species Initial Concentration/Amount
C

osteoclast
1.14404610267855 mmol
T

myeloma cell
10.0 mmol
B

osteoblast
208.00838230519 mmol
Reactions
Reactions Rate Parameters
=> C; B, T tme*ac*C^gcc*B^gcb*(1+hct*T) gcb = -0.5 1; hct = 0.0 1; ac = 3.0 1/d; gcc = 0.0 1
=> T; C tme*at*C^gtc*T^gtt at = 0.316227766016838 1/d; gtt = 0.5 1; gtc = 0.0 1
=> B; C, T tme*ab*C^gbc*B^gbb*(1-hbt*T) gbc = 1.0 1; hbt = 0.0 1; gbb = 0.0 1; ab = 4.0 1/d
B => tme*bb*B bb = 0.02 1/d
C => tme*bc*C bc = 0.2 1/d
T => tme*bt*T bt = 0.1 1/d
Curator's comment:
(added: 29 Aug 2019, 16:23:34, updated: 29 Aug 2019, 16:23:34)
Publication figure 3 reproduced as per literature. Figure data is generated using COPASI 4.26 (build 213).