July, 2020
Schwarz et al (2018 ). Cdk Activity Threshold Determines Passage through the Restriction Point
Model(s) associated with this Model of the Month: BIOMD0000000918
Last updated by: Ahmad Zyoud
BioModels is a repository of mathematical models of biological and biomedical systems. It hosts a vast selection of existing literature-based physiologically and pharmaceutically relevant mechanistic models in standard formats. Our mission is to provide the systems modelling community with reproducible, high-quality, freely-accessible models published in the scientific literature. More information about BioModels can be found in the FAQ.
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Mushayabasa2011- Modeling gonirrhea and HIV co-interaction
Submitter: Krishna Kumar Tiwari | Published date: 2020-07-09Publication: Modeling gonorrhea and HIV co-interaction., Bio Systems (2011) -
Nwabugwu2013 - A Tumor-Immune Mathematical Model of CD4+ T Helper Cell
Submitter: Krishna Kumar Tiwari | Published date: 2020-07-09Publication: A tumor-immune mathematical model of CD4+ T helper cell dependent tumor regression by oncogene inactivation., Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference (2013) -
Pawelek2016 - Within-Host Models of High and Low Pathogenic Influenza Virus Infections
Submitter: Krishna Kumar Tiwari | Published date: 2020-07-09Publication: Within-Host Models of High and Low Pathogenic Influenza Virus Infections: The Role of Macrophages., PloS one (2016) -
Poudel2020 - maltose_model
Submitter: Krishna Kumar Tiwari | Published date: 2020-07-01Publication: Revealing 29 sets of independently modulated genes in Staphylococcus aureus, their regulators, and role in key physiological response, PNAS (2020) -
Poudel2020 - glucose_model
Submitter: Krishna Kumar Tiwari | Published date: 2020-07-01Publication: Revealing 29 sets of independently modulated genes in Staphylococcus aureus, their regulators, and role in key physiological response, PNAS (2020) -
Ducrot2009 - Malaria transmission in two host types
Submitter: Sarubini Kananathan | Published date: 2020-07-09Publication: A mathematical model for malaria involving differential susceptibility, exposedness and infectivity of human host., Journal of biological dynamics (2009) -
Nampala2013 - Liver enzyme elevation in HIV mono-infection
Submitter: Krishna Kumar Tiwari | Published date: 2020-07-09Publication: Mathematical modeling of liver enzyme elevation in HIV mono-infection., Mathematical biosciences (2013)
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- 17/06/2020: New updates for Release 5.1.9
- 03/06/2020: New updates for Release 5.1.8
- 03/06/2020: BioModels Parameters Manuscript accepted
- 17/01/2020: Planned maintenance
- 12/06/2018: Planned upgrades to BioModels
- 22/08/2017: Patient-derived genome-scale metabolic models
- 28/06/2017: 31st release of BioModels
- 07/06/2017: BioModels Release on 1st July 2016
- 07/06/2017: 30th release of BioModels
- 07/06/2017: Proposal submitted to BBSRC accepted
- 06/06/2017: BioModels Content Released on 18th February 2016
- 14/05/2017: Mechanistic models on neurodegenerative disease processes published
- 18/04/2017: Metabolic networks and logical models have been published
- 29/03/2017: BioModels Release on 9th January 2017
How to cite BioModels
- Rahuman S Malik-Sheriff, Mihai Glont, Tung V N Nguyen, Krishna Tiwari, Matthew G Roberts, Ashley Xavier, Manh T Vu, Jinghao Men, Matthieu Maire, Sarubini Kananathan, Emma L Fairbanks, Johannes P Meyer, Chinmay Arankalle, Thawfeek M Varusai, Vincent Knight-Schrijver, Lu Li, Corina Dueñas-Roca, Gaurhari Dass, Sarah M Keating, Young M Park, Nicola Buso, Nicolas Rodriguez, Michael Hucka, and Henning Hermjakob
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Nucl. Acids Res. 2020
- Mihai Glont, Tung V N Nguyen, Martin Graesslin, Robert Hälke, Raza Ali, Jochen Schramm, Sarala M Wimalaratne, Varun B Kothamachu, Nicolas Rodriguez, Maciej J Swat, Jurgen Eils, Roland Eils, Camille Laibe, Rahuman S Malik-Sheriff, Vijayalakshmi Chelliah, Nicolas Le Novère, and Henning Hermjakob
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Nucl. Acids Res. 2018
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Acknowledgements
- BioModels is supported by the European Molecular Biology Laboratory, the Biotechnology and Biological Sciences Research Council (Multimod, BB/N019482/1) and the Innovative Medicines Initiative (TransQST, 116030).
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