BioModels

•   Irani2015 - Genome-scale metabolic model of P.pastoris N-glycosylation
  
  Submitter: Tanisha Malpani | Published date: 2024-10-15
  Publication: Genome-scale metabolic model of Pichia pastoris with native and humanized glycosylation of recombinant proteins., Biotechnology and bioengineering (2016)
•   Feist2006_methanogenesis_OptiMethanol
  
  Submitter: Tanisha Malpani | Published date: 2024-10-15
  Publication: Modeling methanogenesis with a genome-scale metabolic reconstruction of Methanosarcina barkeri., Molecular systems biology (2006)
•   Benedict2011 - Genome-scale metoblic network of Methanosarcina acetivorans (iMB745)
  
  Submitter: Tanisha Malpani | Published date: 2024-10-15
  Publication: Genome-scale metabolic reconstruction and hypothesis testing in the methanogenic archaeon Methanosarcina acetivorans C2A., Journal of bacteriology (2012)
•   Jamshidi2007 - Genome-scale metabolic network of Mycobacterium tuberculosis (iNJ661)
  
  Submitter: Tanisha Malpani | Published date: 2024-10-15
  Publication: Investigating the metabolic capabilities of Mycobacterium tuberculosis H37Rv using the in silico strain iNJ661 and proposing alternative drug targets., BMC systems biology (2007)
•   Becker2005 - Genome-scale metabolic network of Staphylococcus aureus (iSB619)
  
  Submitter: Tanisha Malpani | Published date: 2024-10-15
  Publication: Genome-scale reconstruction of the metabolic network in Staphylococcus aureus N315: an initial draft to the two-dimensional annotation., BMC microbiology (2005)
•   Liao2011 - Genome-scale metabolic reconstruction of Klebsiella pneumoniae (iYL1228)
  
  Submitter: Tanisha Malpani | Published date: 2024-10-15
  Publication: An experimentally validated genome-scale metabolic reconstruction of Klebsiella pneumoniae MGH 78578, iYL1228., Journal of bacteriology (2011)
•   Richards2016 - Genome-scale metabolic reconstruction of Methanococcus maripaludis (iMR539)
  
  Submitter: Tanisha Malpani | Published date: 2024-10-15
  Publication: Exploring Hydrogenotrophic Methanogenesis: a Genome Scale Metabolic Reconstruction of Methanococcus maripaludis., Journal of bacteriology (2016)

•   Novak1997 - Cell Cycle
•   Brännmark2013 - Insulin signalling in human adipocytes (normal condition)
•   Talemi2014 - Arsenic toxicity and detoxification mechanisms in yeast
•   Haffez2017 - RAR interaction with synthetic analogues
•   Stortelder1997 - Thrombin Generation Amidolytic Activity
•   Bungay2003_Thrombin_Generation
•   Hettling2011_CreatineKinase

Rahuman S Malik-Sheriff, Mihai Glont, Tung V N Nguyen, Krishna Tiwari, Matthew G Roberts, Ashley Xavier, Manh T Vu, Jinghao Men, Matthieu Maire, Sarubini Kananathan, Emma L Fairbanks, Johannes P Meyer, Chinmay Arankalle, Thawfeek M Varusai, Vincent Knight-Schrijver, Lu Li, Corina Dueñas-Roca, Gaurhari Dass, Sarah M Keating, Young M Park, Nicola Buso, Nicolas Rodriguez, Michael Hucka, and Henning Hermjakob

BioModels — 15 years of sharing computational models in life science.

Nucl. Acids Res. 2020

Mihai Glont, Tung V N Nguyen, Martin Graesslin, Robert Hälke, Raza Ali, Jochen Schramm, Sarala M Wimalaratne, Varun B Kothamachu, Nicolas Rodriguez, Maciej J Swat, Jurgen Eils, Roland Eils, Camille Laibe, Rahuman S Malik-Sheriff, Vijayalakshmi Chelliah, Nicolas Le Novère, and Henning Hermjakob

BioModels: expanding horizons to include more modelling approaches and formats.

Nucl. Acids Res. 2018

BioModels is supported by the European Molecular Biology Laboratory, the Biotechnology and Biological Sciences Research Council (Multimod, BB/N019482/1) and the Innovative Medicines Initiative (TransQST, 116030).

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