March, 2021
Ito2019 - Gefitinib resistance of lung adenocarcinoma caused by MET amplification
Model(s) associated with this Model of the Month: BIOMD0000000827
Last updated by: Krishna Kumar Tiwari
BioModels is a repository of mathematical models of biological and biomedical systems. It hosts a vast selection of existing literature-based physiologically and pharmaceutically relevant mechanistic models in standard formats. Our mission is to provide the systems modelling community with reproducible, high-quality, freely-accessible models published in the scientific literature. More information about using BioModels such as model submission, update, publication can be found in the FAQ.
Highlight Features
1,000 models
1,261 models
833 models
1,132 classes
228,842 records
Recently published
-
Ankrah2021 - Genome scale metabolic model of Drosophila gut microbe Acetobacter fabarum
Submitter: Kausthubh Ramachandran | Published date: 2021-04-06Publication: The Predicted Metabolic Function of the Gut Microbiota of Drosophila melanogaster, mSystems (2021) -
Ankrah2021 - Genome scale metabolic model of Drosophila gut microbe Acetobacter tropicalis
Submitter: Kausthubh Ramachandran | Published date: 2021-04-06Publication: The Predicted Metabolic Function of the Gut Microbiota of Drosophila melanogaster, mSystems (2021) -
Cacace2020 - Logical model of the regulatory network controlling T cell commitment
Submitter: Kausthubh Ramachandran | Published date: 2021-04-06Publication: Logical modeling of cell fate specification-Application to T cell commitment., Current topics in developmental biology (2020) -
Ankrah2021 - Genome scale metabolic model of Drosophila gut microbe Acetobacter pomorum
Submitter: Kausthubh Ramachandran | Published date: 2021-04-06Publication: The Predicted Metabolic Function of the Gut Microbiota of Drosophila melanogaster, mSystems (2021) -
Bae2017 - Mathematical analysis of circadian disruption and metabolic re-entrainment of hepatic gluconeogenesis
Submitter: Kausthubh Ramachandran | Published date: 2021-04-08Publication: Mathematical analysis of circadian disruption and metabolic re-entrainment of hepatic gluconeogenesis: the intertwining entraining roles of light and feeding., American journal of physiology. Endocrinology and metabolism (2018) -
Ankrah2021 - Genome scale metabolic model of Drosophila gut microbe Lactobacillus plantarum
Submitter: Kausthubh Ramachandran | Published date: 2021-04-06Publication: The Predicted Metabolic Function of the Gut Microbiota of Drosophila melanogaster, mSystems (2021) -
Ankrah2021 - Genome scale metabolic model of Drosophila gut microbe Lactobacillus brevis
Submitter: Kausthubh Ramachandran | Published date: 2021-04-06Publication: The Predicted Metabolic Function of the Gut Microbiota of Drosophila melanogaster, mSystems (2021)
Recently accessed
- Izhikevich2004_SpikingNeurons_Class2Excitable
- Haffez2017 - RAR interaction with synthetic analogues
- Hettling2011_CreatineKinase
- Haberichter2007_cellcycle
- Novak1997 - Cell Cycle
- Talemi2014 - Arsenic toxicity and detoxification mechanisms in yeast
- Brännmark2013 - Insulin signalling in human adipocytes (normal condition)
- Stortelder1997 - Thrombin Generation Amidolytic Activity
- Legewie2006_apoptosis_WT
- Bungay2003_Thrombin_Generation
News
- 27/02/2021: Reproducibility in Systems Biology Modelling manuscript published
- 23/07/2020: Retirement party for the classic BioModels website
- 19/06/2020: New updates for Release 5.1.9
- 10/06/2020: New updates for Release 5.1.8
- 05/06/2020: BioModels Parameters Manuscript accepted
- 17/01/2020: Planned maintenance
- 12/06/2018: Planned upgrades to BioModels
- 21/08/2017: Patient-derived genome-scale metabolic models
- 26/06/2017: 31st release of BioModels
- 16/01/2017: Metabolic networks and logical models have been published
How to cite BioModels
- Rahuman S Malik-Sheriff, Mihai Glont, Tung V N Nguyen, Krishna Tiwari, Matthew G Roberts, Ashley Xavier, Manh T Vu, Jinghao Men, Matthieu Maire, Sarubini Kananathan, Emma L Fairbanks, Johannes P Meyer, Chinmay Arankalle, Thawfeek M Varusai, Vincent Knight-Schrijver, Lu Li, Corina Dueñas-Roca, Gaurhari Dass, Sarah M Keating, Young M Park, Nicola Buso, Nicolas Rodriguez, Michael Hucka, and Henning Hermjakob
-
Nucl. Acids Res. 2020
- Mihai Glont, Tung V N Nguyen, Martin Graesslin, Robert Hälke, Raza Ali, Jochen Schramm, Sarala M Wimalaratne, Varun B Kothamachu, Nicolas Rodriguez, Maciej J Swat, Jurgen Eils, Roland Eils, Camille Laibe, Rahuman S Malik-Sheriff, Vijayalakshmi Chelliah, Nicolas Le Novère, and Henning Hermjakob
-
Nucl. Acids Res. 2018
Documentation
Frequently Asked Questions (FAQs)
Courses
BioModels provides online courses, please consult more information.
Acknowledgements
- BioModels is supported by the European Molecular Biology Laboratory, the Biotechnology and Biological Sciences Research Council (Multimod, BB/N019482/1) and the Innovative Medicines Initiative (TransQST, 116030).
-
