BioModels “Model of the year” competition 2024

BioModels has launched a new competition for early career researchers, to recognize emerging leaders in systems biology modelling, identify exciting modelling research and promote reproducibility and good modelling practice.

Am I eligible?

The competition is aimed at early career researchers, including but not limited to PhD students, postdocs, staff scientists, and research assistants, who have published a peer-reviewed scientific manuscript with a mathematical model within the last two years (since 1 Jan 2022).

Senior PIs, group leaders, lecturers, and professors are not eligible.  However, new PIs, lecturers, and group leaders are eligible to submit the models they developed before becoming independent. 
The competition is open to researchers from academia and industry.

How do I enter the competition?

1) Submit your model to a public (FAIR) model repository

  • Submit model codes to open standard repositories such as BioModelsPhysiome, and CellCollective and make them publicly available.
  • You can submit your model code in any format (e.g. SBML, CellML, COPASI, CC3D, VCell, Antimony, Morpheus, Matlab, Python, C++, R, Julia scripts, etc). However, submitting the models encoded in community standards including COMBINE standards, and/or documenting well would be advantageous. 

2) Submit your application using the online form

  • A short summary/abstract of your model, highlighting its scientific outcome, novelty and impact (max.500 words)
  • Citation and link to the published manuscript (Open access) or a PDF

The deadline for submissions is 29 February 2024

What can I win?

  • Winners will share £1000 award money.
  • They will also receive certificates of excellence.
  • Winners will be invited to write a short blog (2-page max) about their models to be published and promoted on the BioModels platform.
  • The jury will aim to publish a piece entitled “Model of the Year 2024” in a leading systems biology journal highlighting the winners’ work.
     

How are the winners selected?

The jury panel will evaluate the abstracts and select between 4 and 10 BioModels of the year.  Criteria:

  • Scientific merit. Our expert jury panel will evaluate the abstracts on scientific merit.
  • Model reproducibility. Our curators will evaluate the model’s reproducibility. Only reproducible models are eligible.
  • Community standard. Encoding models in community standards when possible is advantageous.

The competition was officially launched at ICSB2022 (https://www.icsb2022.berlin/) in Berlin, Germany.
The winners of MoY2023 were announced at ICSB2023, Hartford, Connecticut, USA.

Further details including an FAQ, eligibility and evaluation criteria, timeline and partners are available here.

Access Model of the Year 2023 page

Winners of MoY2024

Dr Svenja Kemmer Advisor: Jens Timmer
 

Institute of Physics, University of Freiburg, Freiburg, Germany
 

"Hepatocyte Growth Factor Signaling in Fatty Liver Disease”


https://www.ebi.ac.uk/biomodels/MODEL2306280002

 

 

Dr Marcel Mohr Advisor: Friedemann Schmidt


Sanofi, Frankfurt/Main, Germany

"Rabbit Purkinje Cardiac Electrophysiology”


https://www.ebi.ac.uk/biomodels/MODEL2204250001

 

 

 

Drs Xin Zhou, Jakub Tomek, Zhinuo Jenny Wang


Advisor: Blanca Rodriguez, University of Oxford, UK


“Post Infarction Myocyte Electromechanics”

 

https://www.ebi.ac.uk/biomodels/MODEL2402290004

 

 

 

Dr Louis Gall Advisor: Carmen Pin,


AstraZeneca, Cambridge, UK

“Agent-based model of the intestinal epithelium”


 https://www.ebi.ac.uk/biomodels/MODEL2212120002

 

 

Panel Members 

Prof Karthik Raman, IITM

Dr Maria Zimmermann-Kogadeeva, EMBL

Dr Blerta Shtylla, Pfizer

Prof Liesbet Geris, KU Leuven

Dr Hiroki Asari, EMBL 

 

Curators

Dr David Nickerson, U Auckland

Krishna Tiwari, EMBL-EBI

Dr Eva Giessen, EMBL

Miroslav Kratochvil, U Luxembourg


Access Model of the Year 2025 page

If you have questions, please email biomodels-cura@ebi.ac.uk with ‘Model of the year’ in the subject line.