Model Identifier
BIOMD0000000700
Short description
Heldt2018 - Proliferation-quiescence decision in response to DNA damage

This model is described in the article:

Heldt FS, Barr AR, Cooper S, Bakal C, Novák B.
Proc. Natl. Acad. Sci. U.S.A. 2018 Feb; :

Abstract:

Human cells that suffer mild DNA damage can enter a reversible state of growth arrest known as quiescence. This decision to temporarily exit the cell cycle is essential to prevent the propagation of mutations, and most cancer cells harbor defects in the underlying control system. Here we present a mechanistic mathematical model to study the proliferation-quiescence decision in nontransformed human cells. We show that two bistable switches, the restriction point (RP) and the G1/S transition, mediate this decision by integrating DNA damage and mitogen signals. In particular, our data suggest that the cyclin-dependent kinase inhibitor p21 (Cip1/Waf1), which is expressed in response to DNA damage, promotes quiescence by blocking positive feedback loops that facilitate G1 progression downstream of serum stimulation. Intriguingly, cells exploit bistability in the RP to convert graded p21 and mitogen signals into an all-or-nothing cell-cycle response. The same mechanism creates a window of opportunity where G1 cells that have passed the RP can revert to quiescence if exposed to DNA damage. We present experimental evidence that cells gradually lose this ability to revert to quiescence as they progress through G1 and that the onset of rapid p21 degradation at the G1/S transition prevents this response altogether, insulating S phase from mild, endogenous DNA damage. Thus, two bistable switches conspire in the early cell cycle to provide both sensitivity and robustness to external stimuli.

This model is hosted on BioModels Database and identified by: MODEL1703030000.

To cite BioModels Database, please use: Chelliah V et al. BioModels: ten-year anniversary. Nucl. Acids Res. 2015, 43(Database issue):D542-8.

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Format
SBML (L2V4)
Related Publication
  • A comprehensive model for the proliferation-quiescence decision in response to endogenous DNA damage in human cells. Click here to expand
  • Frank S Heldt, Alexis R Barr, Sam Cooper, Chris Bakal, Béla Novák
  • Proceedings of the National Academy of Sciences of the United States of America , 3/ 2018 , Volume 115 , Issue 10 , pages: 2532-2537 , PubMed ID: 29463760
  • Department of Biochemistry, University of Oxford, OX1 3QU Oxford, United Kingdom; stefan.heldt@bioch.ox.ac.uk bela.novak@bioch.ox.ac.uk.
  • Human cells that suffer mild DNA damage can enter a reversible state of growth arrest known as quiescence. This decision to temporarily exit the cell cycle is essential to prevent the propagation of mutations, and most cancer cells harbor defects in the underlying control system. Here we present a mechanistic mathematical model to study the proliferation-quiescence decision in nontransformed human cells. We show that two bistable switches, the restriction point (RP) and the G1/S transition, mediate this decision by integrating DNA damage and mitogen signals. In particular, our data suggest that the cyclin-dependent kinase inhibitor p21 (Cip1/Waf1), which is expressed in response to DNA damage, promotes quiescence by blocking positive feedback loops that facilitate G1 progression downstream of serum stimulation. Intriguingly, cells exploit bistability in the RP to convert graded p21 and mitogen signals into an all-or-nothing cell-cycle response. The same mechanism creates a window of opportunity where G1 cells that have passed the RP can revert to quiescence if exposed to DNA damage. We present experimental evidence that cells gradually lose this ability to revert to quiescence as they progress through G1 and that the onset of rapid p21 degradation at the G1/S transition prevents this response altogether, insulating S phase from mild, endogenous DNA damage. Thus, two bistable switches conspire in the early cell cycle to provide both sensitivity and robustness to external stimuli.
Contributors
Submitter of the first revision: Frank Stefan Heldt
Submitter of this revision: Lucian Smith
Curator: Lucian Smith
Modeller: Frank Stefan Heldt

Metadata information

is (2 statements)
BioModels Database BIOMD0000000700
BioModels Database MODEL1703030000

isDescribedBy (1 statement)
PubMed 29463760

hasTaxon (1 statement)
Taxonomy Homo sapiens

hasPart (2 statements)
hasProperty (1 statement)
Mathematical Modelling Ontology Ordinary differential equation model


Curation status
Curated


Connected external resources