Model Identifier
BIOMD0000000491
Short description
Pathak2013 - MAPK activation in response to various abiotic stresses

MAPK activation mechanism in response to various abiotic stress conditions, such as cold, salt, drought, H2O2, heavy metal and ethylene, in plants

This model is described in the article:

Pathak RK, Taj G, Pandey D, Arora S, Kumar A.
Bioinformation 2013; 9(9): 443-449

Abstract:

Mitogen-Activated Protein Kinases (MAPKs) cascade plays an important role in regulating plant growth and development, generating cellular responses to the extracellular stimuli. MAPKs cascade mainly consist of three sub-families i.e. mitogen-activated protein kinase kinase kinase (MAPKKK), mitogen-activated protein kinase kinase (MAPKK) and mitogen activated protein kinase (MAPK), several cascades of which are activated by various abiotic and biotic stresses. In this work we have modeled the holistic molecular mechanisms essential to MAPKs activation in response to several abiotic and biotic stresses through a system biology approach and performed its simulation studies. As extent of abiotic and biotic stresses goes on increasing, the process of cell division, cell growth and cell differentiation slow down in time dependent manner. The models developed depict the combinatorial and multicomponent signaling triggered in response to several abiotic and biotic factors. These models can be used to predict behavior of cells in event of various stresses depending on their time and exposure through activation of complex signaling cascades.

To the extent possible under law, all copyright and related or neighbouring rights to this encoded model have been dedicated to the public domain worldwide. Please refer to CC0 Public Domain Dedication for more information.

Format
SBML (L2V4)
Related Publication
  • Modeling of the MAPK machinery activation in response to various abiotic and biotic stresses in plants by a system biology approach. Click here to expand
  • Rajesh Kumar Pathak, Gohar Taj, Dinesh Pandey, Sandeep Arora, Anil Kumar
  • Bioinformation , 0/ 2013 , Volume 9 , Issue 9 , pages: 443-449 , PubMed ID: 23847397
  • Department of Molecular Biology & Genetic Engineering, College of Basic Sciences & Humanities, G.B. Pant University Of Agriculture & Technology, Pantnagar-263145, Uttarakhand, India.
  • Mitogen-Activated Protein Kinases (MAPKs) cascade plays an important role in regulating plant growth and development, generating cellular responses to the extracellular stimuli. MAPKs cascade mainly consist of three sub-families i.e. mitogen-activated protein kinase kinase kinase (MAPKKK), mitogen-activated protein kinase kinase (MAPKK) and mitogen activated protein kinase (MAPK), several cascades of which are activated by various abiotic and biotic stresses. In this work we have modeled the holistic molecular mechanisms essential to MAPKs activation in response to several abiotic and biotic stresses through a system biology approach and performed its simulation studies. As extent of abiotic and biotic stresses goes on increasing, the process of cell division, cell growth and cell differentiation slow down in time dependent manner. The models developed depict the combinatorial and multicomponent signaling triggered in response to several abiotic and biotic factors. These models can be used to predict behavior of cells in event of various stresses depending on their time and exposure through activation of complex signaling cascades.
Contributors
Submitter of the first revision: Anil Kumar
Submitter of this revision: Lucian Smith
Curator: Lucian Smith
Modeller: Anil Kumar

Metadata information

is (2 statements)
BioModels Database BIOMD0000000491
BioModels Database MODEL1308220001

isDescribedBy (1 statement)
PubMed 23847397

hasTaxon (1 statement)
Taxonomy Viridiplantae

isVersionOf (2 statements)
hasProperty (1 statement)
Mathematical Modelling Ontology Ordinary differential equation model


Curation status
Curated


Connected external resources