EMDB EMD-8975

Single particle reconstruction
3.5Å resolution

Capsid protein of PCV2 with 2-O-sulfo-alpha-L-idopyranuronic acid and N,O6-DISULFO-GLUCOSAMINE

Map released:
Last modified:
Overview of EMD-8975
Source organisms:
Fitted atomic model: 6e39
Related EM entries by publication: EMD-8969, EMD-8970, EMD-8971, EMD-8972, EMD-8973, EMD-8974
Primary publication:
Porcine Circovirus 2 Uses a Multitude of Weak Binding Sites To Interact with Heparan Sulfate, and the Interactions Do Not Follow the Symmetry of the Capsid.
Dhindwal S, Avila B, Feng S, Khayat R
J.Virol. 93 - (2019)
PMID: 30602608

Function and Biology Details

Sample name: Porcine circovirus 2
Ligands: 2-O-sulfo-alpha-L-idopyranuronic acid, N,O6-DISULFO-GLUCOSAMINE
Proteins: PCV2 capsid, Heparin sulfate, Capsid protein of PCV2
Virus: Porcine circovirus 2

Experimental Information Details

Resolution: 3.5Å
Resolution method: FSC 0.143 CUT-OFF
Applied symmetry: I
Reconstruction software: FREALIGN
Microscope: FEI TITAN
Detector: GATAN K2 SUMMIT (4k x 4k)