EMD-8622

Single-particle
3.7 Å
EMD-8622
3D View Gallery
Deposition: 24/02/2017
Map released: 15/11/2017
Last modified: 24/07/2019
Overview 3D View Sample Experiment Validation Additional data Links
Overview 3D View Sample Experiment Validation Additional data Links

EMD-8622
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3D volume (map.gz) Experimental metadata (xml) Experimental Metadata (cif.gz)
Map-only Validation report (pdf.gz) Map-only Validation report (cif.gz) Map-only Validation report (xml.gz)
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EMICSS annotations (xml)

S. cerevisiae U1 snRNP

EMD-8622

Single-particle
3.7 Å
EMD-8622
3D View Gallery
Deposition: 24/02/2017
Map released: 15/11/2017
Last modified: 24/07/2019
Overview 3D View Sample Experiment Validation Additional data Links
Name: S. cerevisiae U1 snRNP
Complex [1]
Name: S. cerevisiae U1 snRNP
Natural source [1]
Organism: Saccharomyces cerevisiae
Complex Portal [1]
ID Name Overlap
CPX-23 U1 small nuclear ribonucleoprotein complex 0.82
Protein [15]
LEVO
Name: U1 small nuclear ribonucleoprotein 70 kDa homolog
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Baker's yeast
Strain: ATCC 204508 / S288c
Molecular weight
Experimental Theoretical Method
- 34 kDa -
LEVO
Name: U1 small nuclear ribonucleoprotein C
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Baker's yeast
Strain: ATCC 204508 / S288c
Molecular weight
Experimental Theoretical Method
- 27 kDa -
LEVO
Name: U1 small nuclear ribonucleoprotein A,TAP tag
Number of copies: 1
Details: C-terminal TAP tag
Natural source
Organism: Saccharomyces cerevisiae S288c
Molecular weight
Experimental Theoretical Method
- 55 kDa -
Recombinant Expression
Organism Strain Cell Plasmid
Saccharomyces cerevisiae - - -
LEVO
Name: U1 small nuclear ribonucleoprotein component PRP42
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Baker's yeast
Strain: ATCC 204508 / S288c
Molecular weight
Experimental Theoretical Method
- 65 kDa -
LEVO
Name: Pre-mRNA-processing factor 39
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Baker's yeast
Strain: ATCC 204508 / S288c
Molecular weight
Experimental Theoretical Method
- 74 kDa -
LEVO
Name: Protein NAM8
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Baker's yeast
Strain: ATCC 204508 / S288c
Molecular weight
Experimental Theoretical Method
- 57 kDa -
LEVO
Name: 56 kDa U1 small nuclear ribonucleoprotein component
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Baker's yeast
Strain: ATCC 204508 / S288c
Molecular weight
Experimental Theoretical Method
- 56 kDa -
LEVO
Name: Protein LUC7
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Baker's yeast
Strain: ATCC 204508 / S288c
Molecular weight
Experimental Theoretical Method
- 30 kDa -
LEVO
Name: Small nuclear ribonucleoprotein-associated protein B
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Baker's yeast
Strain: ATCC 204508 / S288c
Molecular weight
Experimental Theoretical Method
- 22 kDa -
LEVO
Name: Small nuclear ribonucleoprotein Sm D1
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Baker's yeast
Strain: ATCC 204508 / S288c
Molecular weight
Experimental Theoretical Method
- 16 kDa -
LEVO
Name: Small nuclear ribonucleoprotein Sm D2
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Baker's yeast
Strain: ATCC 204508 / S288c
Molecular weight
Experimental Theoretical Method
- 12 kDa -
LEVO
Name: Small nuclear ribonucleoprotein Sm D3
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Baker's yeast
Strain: ATCC 204508 / S288c
Molecular weight
Experimental Theoretical Method
- 11 kDa -
LEVO
Name: Small nuclear ribonucleoprotein E
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Baker's yeast
Strain: ATCC 204508 / S288c
Molecular weight
Experimental Theoretical Method
- 10 kDa -
LEVO
Name: Small nuclear ribonucleoprotein F
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Baker's yeast
Strain: ATCC 204508 / S288c
Molecular weight
Experimental Theoretical Method
- 9 kDa -
LEVO
Name: Small nuclear ribonucleoprotein G
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Natural source
Organism: Baker's yeast
Strain: ATCC 204508 / S288c
Molecular weight
Experimental Theoretical Method
- 8 kDa -
RNA [1]
Name: RNA
Number of copies: 1
Natural source
Organism: Saccharomyces cerevisiae
Molecular weight
Experimental Theoretical Method
- 182 kDa -