EMD-73641
The Kaggle CryoET Object Identification Challenge: first place beta-amylase
EMD-73641
Subtomogram averaging10.6 Å
Deposition: 29/10/2025Map released: 03/12/2025
Last modified: 16/09/2026
Sample Organism:
Homo sapiens
Sample: HEK293T cell lysate mixed with purified proteins on functionalized EM grids
Deposition Authors: Peck A
,
Hutchings J ,
Schwartz J ,
Paraan M
Sample: HEK293T cell lysate mixed with purified proteins on functionalized EM grids
Deposition Authors: Peck A
,
Hutchings J ,
Schwartz J ,
Paraan M
Lessons learned from a Kaggle challenge for particle picking in cryo-electron tomography.
Peck A ,
Hutchings J ,
Schwartz J ,
Yu Y ,
Ermel UH ,
Kandel S,
Kimanius D ,
Zhao Z ,
Zheng S ,
Artley B,
List D ,
Silva Jr SA ,
Reade W,
Asuncion J,
Evans K,
Gadling J,
Khandwala K ,
McCanny S,
McCarthy DG,
Ni JX ,
Pourroy J ,
Venkatakrishnan M,
Wang ZS,
Agard DA,
Potter CS,
Carragher B ,
Harrington KIS ,
Paraan M
(2026) Nat Methods , 23 , 1908 - 1916
,
Hutchings J ,
Schwartz J ,
Yu Y ,
Ermel UH ,
Kandel S,
Kimanius D ,
Zhao Z ,
Zheng S ,
Artley B,
List D ,
Silva Jr SA ,
Reade W,
Asuncion J,
Evans K,
Gadling J,
Khandwala K ,
McCanny S,
McCarthy DG,
Ni JX ,
Pourroy J ,
Venkatakrishnan M,
Wang ZS,
Agard DA,
Potter CS,
Carragher B ,
Harrington KIS ,
Paraan M
(2026) Nat Methods , 23 , 1908 - 1916
Secondary citations:
- Peck A, Hutchings J, Schwartz J, Yu Y, Ermel UH, Kandel S, Kimanius D, Zhao Z, Zheng S, Artley B, List D, Silva SA, Reade W, Asuncion J, Evans K, Gadling J, Khandwala K, McCanny S, McCarthy DG, Ni JX, Pourroy J, Venkatakrishnan M, Wang ZS, Agard DA, Potter CS, Carragher B, Harrington K & Paraan M. (2025) Lessons learned from a Kaggle challenge for particle picking in cryo-electron tomography. bioRxiv,
- Peck A, Yu Y, Schwartz J, Cheng A, Ermel UH, Hutchings J, Kandel S, Kimanius D, Montabana EA, Serwas D, Siems H, Wang F, Zhao Z, Zheng S, Haury M, Agard DA, Potter CS, Carragher B, Harrington K & Paraan M. (2025) A realistic phantom dataset for benchmarking cryo-ET data annotation. 22, 1819 - 1823
Grant Support:
- Chan Zuckerberg Initiative: CZII2023327779 (United States)