EMD-61358

Single-particle
3.34 Å
EMD-61358
3D View Gallery
Deposition: 28/08/2024
Map released: 03/09/2025
Last modified: 24/09/2025
Overview 3D View Sample Experiment Validation Additional data Links
Overview 3D View Sample Experiment Validation Additional data Links

EMD-61358
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3D volume (map.gz) Experimental metadata (xml) Experimental Metadata (cif.gz)
Map-only Validation report (pdf.gz) Map-only Validation report (cif.gz) Map-only Validation report (xml.gz)
Map and PDB model 9jc6 summary report (pdf.gz) Map and 9jc6 FULL report (pdf.gz)
EMICSS annotations (xml)

Human H2BW2 nucleosome

EMD-61358

Single-particle
3.34 Å
EMD-61358
3D View Gallery
Deposition: 28/08/2024
Map released: 03/09/2025
Last modified: 24/09/2025
Overview 3D View Sample Experiment Validation Additional data Links
Sample Organism: Homo sapiens, synthetic construct
Sample: Human H2BW2 nucleosome with 601 DNA sequence
Fitted models: 9jc6

Deposition Authors: Ding DB, Ishibashi T, Nguyen TT
H2B.W2, a spermatocyte-specific histone variant, disrupts nucleosome stability, and reduces chromatin compaction.
Nguyen ATT, Ding D, Bai X, Pang MYH, Deng M, Liu Y, Jin T, Xu Z, Zhang Y, Zhai Y, Yan Y, Ishibashi T
(2025) Nucleic Acids Res , 53
PUBMED: 40874595
DOI: doi:10.1093/nar/gkaf825
ISSN: 1362-4962
ASTM: NARHAD