EMDB EMD-4935

Single particle reconstruction
3.4Å resolution

Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome

Map released:
Overview of EMD-4935
Source organism: Vairimorpha necatrix [6039]
Fitted atomic model: 6rm3
Related EM entries by publication: EMD-4931, EMD-4932, EMD-4933, EMD-4934
Primary publication:
Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome
Barandun J, Hunziker M, Vossbrinck CR, Klinge S
Nat Microbiol - (2019)

Function and Biology Details

Sample name: Microsporidian Ribosome
Ligands: MAGNESIUM ION, ZINC ION
Nucleic acids: 16S rRNA, 5S rRNA, 23S rRNA
Proteins: Microsporidian Ribosome, uL2, uS2, uL15, eS26, uL3, eS1, eL29, eS27, uL4, uS5, eL30, eS28, uL18, uS3, eL31, uS14, eL6, eS4, eL32, eS30, uL30, uS7, eL33, eS31, eL8, eS6, eL34, RACK1, uL6, eS7, uL29, uL16, eS8, eL36, uL5, uS4, eL37, eL13, uS17, eL39, eL14, eL40, eS12, eL15, uS15, MDF2, MDF1, uL13, uS11, eL42, uL22, uS19, eL43, eL18, uS9, eL19, eS17, eL20, uS13, eL21, eS19, eL22, uS10, uL14, eS21, eL24, uS8, uL23, uS12, msL1, uL24, eS24, eL27, eS25, eS10

Experimental Information Details

Resolution: 3.4Å
Resolution method: FSC 0.143 CUT-OFF
Applied symmetry: C1
Reconstruction software: RELION
Microscope: FEI TALOS ARCTICA
Detector: GATAN K2 SUMMIT (4k x 4k)