EMD-46543

Single-particle
2.5 Å
EMD-46543
3D View Gallery
Deposition: 11/08/2024
Map released: 13/08/2025
Last modified: 15/10/2025
Overview 3D View Sample Experiment Validation Additional data Links
Overview 3D View Sample Experiment Validation Additional data Links

EMD-46543
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3D volume (map.gz) Experimental metadata (xml) Experimental Metadata (cif.gz)
Map-only Validation report (pdf.gz) Map-only Validation report (cif.gz) Map-only Validation report (xml.gz)
Map and PDB model 9d3p summary report (pdf.gz) Map and 9d3p FULL report (pdf.gz)
EMICSS annotations (xml)

167-bp 5S rDNA nucleosome - open I (open only on the downstream side)

EMD-46543

Single-particle
2.5 Å
EMD-46543
3D View Gallery
Deposition: 11/08/2024
Map released: 13/08/2025
Last modified: 15/10/2025
Overview 3D View Sample Experiment Validation Additional data Links
Sample Organism: Homo sapiens, Xenopus borealis
Sample: 167-bp 5S rDNA Nucleosome - open downstream
Fitted models: 9d3p

Deposition Authors: Alegrio Louro J , Cruz-Becerra G , Kadonaga JT , Leschziner AE
Structural basis of nucleosome recognition by the conserved Dsup and HMGN nucleosome-binding motif.
Alegrio-Louro J, Cruz-Becerra G , Kassavetis GA , Kadonaga JT , Leschziner AE
(2025) Genes Dev , 39 , 1155 - 1161
PUBMED: 40721296
DOI: doi:10.1101/gad.352720.125
ISSN: 0890-9369
ASTM: GEDEEP