EMD-39550

Single-particle
2.85 Å
EMD-39550
3D View Gallery
Deposition: 21/03/2024
Map released: 24/09/2025
Last modified: 08/04/2026
Overview 3D View Sample Experiment Validation Additional data Links
Overview 3D View Sample Experiment Validation Additional data Links

EMD-39550

Archive Files (Depositor)

Primary 3D volume (map.gz) Half-map 1 Half-map 2 (map.gz) Experimental metadata (xml) Experimental metadata (cif.gz)

Validation (wwPDB)

Map-only validation report (pdf.gz)

EMDB Annotations

EMICSS entry mapping (xml)

EMDB Files

VA raw map (map) VA resolution mask (mrc)

Cryo-EM map of UHRF1 in complex with nucleosome containing hemimethylated CpG site at widom601 sequence

EMD-39550

Single-particle
2.85 Å
EMD-39550
3D View Gallery
Deposition: 21/03/2024
Map released: 24/09/2025
Last modified: 08/04/2026
Overview 3D View Sample Experiment Validation Additional data Links
Sample Organism: Homo sapiens
Sample: UHRF1 in complex with nucleosome containing hemimethylated CpG site at widom601 sequence

Deposition Authors: Shikimachi R , Arita K
Structural basis for E3 ubiquitin ligase UHRF1 binding to nucleosome core particle and histone H3 ubiquitination.
Shikimachi R , Matsuzawa S, Onoda H, Konuma T, Yamagata A , Shirouzu M, Yamaguchi K , Arita K
(2025) J Biol Chem , 301 , 110894 - 110894
PUBMED: 41197730
DOI: doi:10.1016/j.jbc.2025.110894
ISSN: 1083-351X
ASTM: JBCHA3