EMD-37125

Single-particle
2.9 Å
EMD-37125
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Deposition: 09/08/2023
Map released: 13/09/2023
Last modified: 02/07/2025
Overview 3D View Sample Experiment Validation Additional data Links
Overview 3D View Sample Experiment Validation Additional data Links

EMD-37125
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3D volume (map.gz) Experimental metadata (xml) Experimental Metadata (cif.gz)
Map-only Validation report (pdf.gz) Map-only Validation report (cif.gz) Map-only Validation report (xml.gz)
Map and PDB model 8kd5 summary report (pdf.gz) Map and 8kd5 FULL report (pdf.gz)
EMICSS annotations (xml)

Rpd3S in complex with nucleosome with H3K36MLA modification and 187bp DNA, class2

EMD-37125

Single-particle
2.9 Å
EMD-37125
3D View Gallery
Deposition: 09/08/2023
Map released: 13/09/2023
Last modified: 02/07/2025
Overview 3D View Sample Experiment Validation Additional data Links
Sample Organism: Saccharomyces cerevisiae, Xenopus laevis, synthetic construct
Sample: H3/H4 deacetylation state of Rpd3S-NCP (187bp/MLA) class2
Fitted models: 8kd5

Deposition Authors: Dong S, Li H, Meilin W, Rasheed N , Zou B, Gao X, Guan J, Li W, Zhang J, Wang C, Zhou N, Shi X, Li M, Zhou M, Huang J, Li H, Zhang Y, Wong KH, Zhang X , Chao WCH , He J
Structural basis of nucleosome deacetylation and DNA linker tightening by Rpd3S histone deacetylase complex.
Dong S, Li H, Wang M, Rasheed N , Zou B, Gao X, Guan J, Li W, Zhang J, Wang C, Zhou N, Shi X, Li M, Zhou M, Huang J, Li H, Zhang Y, Wong KH, Zhang X , Chao WCH , He J
(2023) Cell Res , 33 , 790 - 801
PUBMED: 37666978
DOI: doi:10.1038/s41422-023-00869-1
ISSN: 1001-0602