EMDB EMD-20432

Single particle reconstruction
4.3Å resolution

Kaposi's sarcoma-associated herpesvirus (KSHV), C5 portal vertex structure

Map released:
Last modified:
Overview of EMD-20432
Source organisms:
Fitted atomic model: 6ppb
Related EM entries by publication: EMD-20430, EMD-20431, EMD-20433, EMD-20436, EMD-20437
Primary publication:
DNA-Packing Portal and Capsid-Associated Tegument Complexes in the Tumor Herpesvirus KSHV.
Gong D, Dai X, Jih J, Liu YT, Bi GQ, Sun R, Zhou ZH
Cell 178 1329-1343.e12 (2019)
PMID: 31447177

Function and Biology Details

Sample name: Human gammaherpesvirus 8
Proteins: Capsid vertex component 1, Capsid vertex component 2, Large tegument protein deneddylase, Major capsid protein, Triplex capsid protein 1, Triplex capsid protein 2, Small capsomere-interacting protein
Virus: Human gammaherpesvirus 8

Experimental Information Details

Resolution: 4.3Å
Resolution method: FSC 0.143 CUT-OFF
Applied symmetry: C5
Reconstruction software: RELION
Microscope: FEI TITAN KRIOS
Detector: GATAN K2 SUMMIT (4k x 4k)