EMD-10073
Ribosome nascent chain in complex with SecA
EMD-10073
Single-particle3.1 Å
Deposition: 17/06/2019
Map released: 09/10/2019
Last modified: 10/07/2024
Name: ribosome nascent chain in complex with SecA
Summary:
- Complex
- RNA
- Protein
- 50S ribosomal protein L2
- 50S ribosomal protein L3
- 50S ribosomal protein L4
- 50S ribosomal protein L5
- 50S ribosomal protein L6
- 50S ribosomal protein L9
- 50S ribosomal protein L10
- 50S ribosomal protein L11
- 50S ribosomal protein L13
- 50S ribosomal protein L14
- 50S ribosomal protein L15
- 50S ribosomal protein L16
- 50S ribosomal protein L17
- 50S ribosomal protein L18
- 50S ribosomal protein L19
- 50S ribosomal protein L20
- 50S ribosomal protein L21
- 50S ribosomal protein L22
- 50S ribosomal protein L23
- 50S ribosomal protein L24
- 50S ribosomal protein L25
- 50S ribosomal protein L27
- 50S ribosomal protein L28
- 50S ribosomal protein L29
- 50S ribosomal protein L30
- 50S ribosomal protein L32
- 50S ribosomal protein L33
- 50S ribosomal protein L34
- 50S ribosomal protein L35
- 50S ribosomal protein L36
- Protein translocase subunit SecA
- Cytoskeleton protein RodZ
- Ligand
ribosome nascent chain in complex with SecA
Name: Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 2 MDa | - |
Complex Portal [2]
ID | Name | Overlap |
---|---|---|
CPX-3807 | 50S large ribosomal subunit | 0.81 |
CPX-3807 | 50S large ribosomal subunit | 0.83 |
ribosome
Name:
Name:
Name: Natural source [1]
Organism: Escherichia coli
Complex Portal [2]
ID | Name | Overlap |
---|---|---|
CPX-3807 | 50S large ribosomal subunit | 0.81 |
CPX-3807 | 50S large ribosomal subunit | 0.83 |
tRNA-CCA
Number of copies: 1
Name: Number of copies: 1
Natural source
Organism: Escherichia coli
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 894 Da | - |
23S ribosomal RNA
Number of copies: 1
Name: Number of copies: 1
Natural source
Organism: Escherichia coli
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 934 kDa | - |
5S ribosomal RNA
Number of copies: 1
Name: Number of copies: 1
Natural source
Organism: Escherichia coli
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 38 kDa | - |
50S ribosomal protein L2
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [13]
Biological process:
negative regulation of DNA-templated DNA replication initiation negative regulation of DNA-dependent DNA replication initiation ribosomal large subunit assembly cytoplasmic translation
Molecular function:
rRNA binding zinc ion binding structural constituent of ribosome RNA binding transferase activity
Cellular location:
cytosol cytosolic large ribosomal subunit DnaA-L2 complex cytoplasm
negative regulation of DNA-templated DNA replication initiation negative regulation of DNA-dependent DNA replication initiation ribosomal large subunit assembly cytoplasmic translation
Molecular function:
rRNA binding zinc ion binding structural constituent of ribosome RNA binding transferase activity
Cellular location:
cytosol cytosolic large ribosomal subunit DnaA-L2 complex cytoplasm
Natural source
Organism: Escherichia coli
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 29 kDa | - |
50S ribosomal protein L3
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [8]
Biological process:
cytoplasmic translation ribosomal large subunit assembly translation
Molecular function:
rRNA binding structural constituent of ribosome
Cellular location:
cytosolic large ribosomal subunit cytoplasm cytosol
cytoplasmic translation ribosomal large subunit assembly translation
Molecular function:
rRNA binding structural constituent of ribosome
Cellular location:
cytosolic large ribosomal subunit cytoplasm cytosol
Natural source
Organism: Escherichia coli
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 22 kDa | - |
50S ribosomal protein L4
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [24]
Biological process:
negative regulation of DNA-templated transcription DNA-templated transcription termination transcriptional attenuation cytoplasmic translation negative regulation of cytoplasmic translation response to antibiotic negative regulation of translation negative regulation of transcription, DNA-templated negative regulation of endoribonuclease activity DNA-templated transcription, termination ribosome assembly translation
Molecular function:
DNA binding mRNA 5'-UTR binding RNA-binding transcription regulator activity rRNA binding translation repressor activity endoribonuclease inhibitor activity structural constituent of ribosome
Cellular location:
polysomal ribosome cytosol cytosolic large ribosomal subunit cytoplasm large ribosomal subunit
negative regulation of DNA-templated transcription DNA-templated transcription termination transcriptional attenuation cytoplasmic translation negative regulation of cytoplasmic translation response to antibiotic negative regulation of translation negative regulation of transcription, DNA-templated negative regulation of endoribonuclease activity DNA-templated transcription, termination ribosome assembly translation
Molecular function:
DNA binding mRNA 5'-UTR binding RNA-binding transcription regulator activity rRNA binding translation repressor activity endoribonuclease inhibitor activity structural constituent of ribosome
Cellular location:
polysomal ribosome cytosol cytosolic large ribosomal subunit cytoplasm large ribosomal subunit
Natural source
Organism: Escherichia coli
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 22 kDa | - |
50S ribosomal protein L5
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [10]
Biological process:
cytoplasmic translation ribosomal large subunit assembly translation
Molecular function:
5S rRNA binding tRNA binding RNA binding structural constituent of ribosome
Cellular location:
cytosolic large ribosomal subunit cytoplasm cytosol
cytoplasmic translation ribosomal large subunit assembly translation
Molecular function:
5S rRNA binding tRNA binding RNA binding structural constituent of ribosome
Cellular location:
cytosolic large ribosomal subunit cytoplasm cytosol
Natural source
Organism: Escherichia coli
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 20 kDa | - |
50S ribosomal protein L6
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [8]
Biological process:
response to antibiotic cytoplasmic translation ribosomal large subunit assembly
Molecular function:
large ribosomal subunit rRNA binding structural constituent of ribosome
Cellular location:
cytosolic large ribosomal subunit cytoplasm cytosol
response to antibiotic cytoplasmic translation ribosomal large subunit assembly
Molecular function:
large ribosomal subunit rRNA binding structural constituent of ribosome
Cellular location:
cytosolic large ribosomal subunit cytoplasm cytosol
Natural source
Organism: Escherichia coli
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 18 kDa | - |
50S ribosomal protein L9
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [7]
Biological process:
cytoplasmic translation translation
Molecular function:
large ribosomal subunit rRNA binding structural constituent of ribosome
Cellular location:
cytoplasm cytosolic large ribosomal subunit cytosol
cytoplasmic translation translation
Molecular function:
large ribosomal subunit rRNA binding structural constituent of ribosome
Cellular location:
cytoplasm cytosolic large ribosomal subunit cytosol
Natural source
Organism: Escherichia coli
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 15 kDa | - |
50S ribosomal protein L10
Number of copies: 1
UniProtKB UniProtKB UniProtKB PDBe-KB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB UniProtKB PDBe-KB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB AlphaFold DB
Natural source
Organism: Escherichia coli
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 17 kDa | - |
50S ribosomal protein L11
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [12]
Biological process:
cytoplasmic translation translational termination translation ribosomal large subunit assembly stringent response
Molecular function:
large ribosomal subunit rRNA binding rRNA binding structural constituent of ribosome
Cellular location:
cytosol large ribosomal subunit cytosolic large ribosomal subunit cytoplasm
cytoplasmic translation translational termination translation ribosomal large subunit assembly stringent response
Molecular function:
large ribosomal subunit rRNA binding rRNA binding structural constituent of ribosome
Cellular location:
cytosol large ribosomal subunit cytosolic large ribosomal subunit cytoplasm
Natural source
Organism: Escherichia coli
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 14 kDa | - |
50S ribosomal protein L13
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [12]
Biological process:
cytoplasmic translation translation negative regulation of translation
Molecular function:
mRNA 5'-UTR binding large ribosomal subunit rRNA binding mRNA binding zinc ion binding structural constituent of ribosome
Cellular location:
cytosol cytosolic large ribosomal subunit ribosome cytoplasm
cytoplasmic translation translation negative regulation of translation
Molecular function:
mRNA 5'-UTR binding large ribosomal subunit rRNA binding mRNA binding zinc ion binding structural constituent of ribosome
Cellular location:
cytosol cytosolic large ribosomal subunit ribosome cytoplasm
Natural source
Organism: Escherichia coli
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 16 kDa | - |
50S ribosomal protein L14
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [7]
Biological process:
cytoplasmic translation translation
Molecular function:
large ribosomal subunit rRNA binding structural constituent of ribosome
Cellular location:
cytoplasm cytosol cytosolic large ribosomal subunit
cytoplasmic translation translation
Molecular function:
large ribosomal subunit rRNA binding structural constituent of ribosome
Cellular location:
cytoplasm cytosol cytosolic large ribosomal subunit
Natural source
Organism: Escherichia coli
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 13 kDa | - |
50S ribosomal protein L15
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [6]
Biological process:
cytoplasmic translation translation
Molecular function:
rRNA binding structural constituent of ribosome
Cellular location:
cytoplasm cytosolic large ribosomal subunit
cytoplasmic translation translation
Molecular function:
rRNA binding structural constituent of ribosome
Cellular location:
cytoplasm cytosolic large ribosomal subunit
Natural source
Organism: Escherichia coli
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 15 kDa | - |
50S ribosomal protein L16
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [8]
Biological process:
cytoplasmic translation ribosomal large subunit assembly translation
Molecular function:
structural constituent of ribosome tRNA binding rRNA binding
Cellular location:
cytosolic large ribosomal subunit cytoplasm
cytoplasmic translation ribosomal large subunit assembly translation
Molecular function:
structural constituent of ribosome tRNA binding rRNA binding
Cellular location:
cytosolic large ribosomal subunit cytoplasm
Natural source
Organism: Escherichia coli
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 15 kDa | - |
50S ribosomal protein L17
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [8]
Biological process:
cytoplasmic translation translation ribosomal large subunit assembly
Molecular function:
structural constituent of ribosome
Cellular location:
cytosolic large ribosomal subunit large ribosomal subunit cytosol cytoplasm
cytoplasmic translation translation ribosomal large subunit assembly
Molecular function:
structural constituent of ribosome
Cellular location:
cytosolic large ribosomal subunit large ribosomal subunit cytosol cytoplasm
Natural source
Organism: Escherichia coli
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 14 kDa | - |
50S ribosomal protein L18
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [7]
Biological process:
cytoplasmic translation translation
Molecular function:
structural constituent of ribosome 5S rRNA binding
Cellular location:
cytosolic large ribosomal subunit cytosol cytoplasm
cytoplasmic translation translation
Molecular function:
structural constituent of ribosome 5S rRNA binding
Cellular location:
cytosolic large ribosomal subunit cytosol cytoplasm
Natural source
Organism: Escherichia coli
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 12 kDa | - |
50S ribosomal protein L19
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [8]
Biological process:
cytoplasmic translation translation ribosomal large subunit assembly
Molecular function:
structural constituent of ribosome large ribosomal subunit rRNA binding
Cellular location:
cytosolic large ribosomal subunit cytosol cytoplasm
cytoplasmic translation translation ribosomal large subunit assembly
Molecular function:
structural constituent of ribosome large ribosomal subunit rRNA binding
Cellular location:
cytosolic large ribosomal subunit cytosol cytoplasm
Natural source
Organism: Escherichia coli
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 13 kDa | - |
50S ribosomal protein L20
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [11]
Biological process:
cytoplasmic translation translation ribosomal large subunit assembly
Molecular function:
mRNA regulatory element binding translation repressor activity translation repressor activity, mRNA regulatory element binding mRNA binding structural constituent of ribosome large ribosomal subunit rRNA binding
Cellular location:
cytosol cytosolic large ribosomal subunit cytoplasm
cytoplasmic translation translation ribosomal large subunit assembly
Molecular function:
mRNA regulatory element binding translation repressor activity translation repressor activity, mRNA regulatory element binding mRNA binding structural constituent of ribosome large ribosomal subunit rRNA binding
Cellular location:
cytosol cytosolic large ribosomal subunit cytoplasm
Natural source
Organism: Escherichia coli
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 13 kDa | - |
50S ribosomal protein L21
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [7]
Biological process:
cytoplasmic translation translation
Molecular function:
rRNA binding structural constituent of ribosome
Cellular location:
cytosol cytosolic large ribosomal subunit cytoplasm
cytoplasmic translation translation
Molecular function:
rRNA binding structural constituent of ribosome
Cellular location:
cytosol cytosolic large ribosomal subunit cytoplasm
Natural source
Organism: Escherichia coli
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 11 kDa | - |
50S ribosomal protein L22
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [15]
Biological process:
cytosolic ribosome assembly assembly of large subunit precursor of preribosome cytoplasmic translation mature ribosome assembly response to antibiotic ribosome assembly translation
Molecular function:
large ribosomal subunit rRNA binding structural constituent of ribosome rRNA binding
Cellular location:
large ribosomal subunit cytosol cytosolic large ribosomal subunit cytoplasm polysomal ribosome
cytosolic ribosome assembly assembly of large subunit precursor of preribosome cytoplasmic translation mature ribosome assembly response to antibiotic ribosome assembly translation
Molecular function:
large ribosomal subunit rRNA binding structural constituent of ribosome rRNA binding
Cellular location:
large ribosomal subunit cytosol cytosolic large ribosomal subunit cytoplasm polysomal ribosome
Natural source
Organism: Escherichia coli
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 12 kDa | - |
50S ribosomal protein L23
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [7]
Biological process:
cytoplasmic translation translation ribosomal large subunit assembly
Molecular function:
rRNA binding structural constituent of ribosome
Cellular location:
cytosolic large ribosomal subunit cytoplasm
cytoplasmic translation translation ribosomal large subunit assembly
Molecular function:
rRNA binding structural constituent of ribosome
Cellular location:
cytosolic large ribosomal subunit cytoplasm
Natural source
Organism: Escherichia coli
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 11 kDa | - |
50S ribosomal protein L24
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [8]
Biological process:
cytoplasmic translation ribosomal large subunit assembly translation
Molecular function:
large ribosomal subunit rRNA binding structural constituent of ribosome
Cellular location:
cytoplasm cytosolic large ribosomal subunit cytosol
cytoplasmic translation ribosomal large subunit assembly translation
Molecular function:
large ribosomal subunit rRNA binding structural constituent of ribosome
Cellular location:
cytoplasm cytosolic large ribosomal subunit cytosol
Natural source
Organism: Escherichia coli
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 11 kDa | - |
50S ribosomal protein L25
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [10]
Biological process:
cytoplasmic translation ribosomal large subunit assembly response to radiation negative regulation of translation translation
Molecular function:
5S rRNA binding structural constituent of ribosome
Cellular location:
cytoplasm cytosolic large ribosomal subunit cytosol
cytoplasmic translation ribosomal large subunit assembly response to radiation negative regulation of translation translation
Molecular function:
5S rRNA binding structural constituent of ribosome
Cellular location:
cytoplasm cytosolic large ribosomal subunit cytosol
Natural source
Organism: Escherichia coli
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 10 kDa | - |
50S ribosomal protein L27
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [14]
Biological process:
cytosolic ribosome assembly cytoplasmic translation mature ribosome assembly positive regulation of ribosome biogenesis regulation of cell growth ribosomal large subunit assembly assembly of large subunit precursor of preribosome translation
Molecular function:
ribosome binding structural constituent of ribosome rRNA binding tRNA binding
Cellular location:
cytoplasm cytosolic large ribosomal subunit
cytosolic ribosome assembly cytoplasmic translation mature ribosome assembly positive regulation of ribosome biogenesis regulation of cell growth ribosomal large subunit assembly assembly of large subunit precursor of preribosome translation
Molecular function:
ribosome binding structural constituent of ribosome rRNA binding tRNA binding
Cellular location:
cytoplasm cytosolic large ribosomal subunit
Natural source
Organism: Escherichia coli
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 9 kDa | - |
50S ribosomal protein L28
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [8]
Biological process:
cytoplasmic translation translation ribosomal large subunit assembly
Molecular function:
structural constituent of ribosome rRNA binding
Cellular location:
cytoplasm cytosol cytosolic large ribosomal subunit
cytoplasmic translation translation ribosomal large subunit assembly
Molecular function:
structural constituent of ribosome rRNA binding
Cellular location:
cytoplasm cytosol cytosolic large ribosomal subunit
Natural source
Organism: Escherichia coli
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 9 kDa | - |
50S ribosomal protein L29
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [7]
Biological process:
cytoplasmic translation ribosomal large subunit assembly translation
Molecular function:
structural constituent of ribosome rRNA binding
Cellular location:
cytosolic large ribosomal subunit cytoplasm
cytoplasmic translation ribosomal large subunit assembly translation
Molecular function:
structural constituent of ribosome rRNA binding
Cellular location:
cytosolic large ribosomal subunit cytoplasm
Natural source
Organism: Escherichia coli
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 7 kDa | - |
50S ribosomal protein L30
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [6]
Biological process:
cytoplasmic translation ribosomal large subunit assembly translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytosolic large ribosomal subunit cytoplasm
cytoplasmic translation ribosomal large subunit assembly translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytosolic large ribosomal subunit cytoplasm
Natural source
Organism: Escherichia coli
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 6 kDa | - |
50S ribosomal protein L32
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [9]
Biological process:
cytoplasmic translation response to reactive oxygen species ribosomal large subunit assembly response to radiation translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytosol cytoplasm cytosolic large ribosomal subunit
cytoplasmic translation response to reactive oxygen species ribosomal large subunit assembly response to radiation translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytosol cytoplasm cytosolic large ribosomal subunit
Natural source
Organism: Escherichia coli
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 6 kDa | - |
50S ribosomal protein L33
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [10]
Biological process:
cytoplasmic translation translation ribosomal large subunit assembly response to antibiotic
Molecular function:
structural constituent of ribosome tRNA binding
Cellular location:
cytosol cytosolic large ribosomal subunit cytoplasm large ribosomal subunit
cytoplasmic translation translation ribosomal large subunit assembly response to antibiotic
Molecular function:
structural constituent of ribosome tRNA binding
Cellular location:
cytosol cytosolic large ribosomal subunit cytoplasm large ribosomal subunit
Natural source
Organism: Escherichia coli
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 6 kDa | - |
50S ribosomal protein L34
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [5]
Biological process:
cytoplasmic translation translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytoplasm cytosolic large ribosomal subunit
cytoplasmic translation translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytoplasm cytosolic large ribosomal subunit
Natural source
Organism: Escherichia coli
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 5 kDa | - |
50S ribosomal protein L35
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [6]
Biological process:
cytoplasmic translation translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytosolic large ribosomal subunit large ribosomal subunit cytoplasm
cytoplasmic translation translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytosolic large ribosomal subunit large ribosomal subunit cytoplasm
Natural source
Organism: Escherichia coli
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 7 kDa | - |
50S ribosomal protein L36
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [5]
Biological process:
cytoplasmic translation translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytoplasm cytosolic large ribosomal subunit
cytoplasmic translation translation
Molecular function:
structural constituent of ribosome
Cellular location:
cytoplasm cytosolic large ribosomal subunit
Natural source
Organism: Escherichia coli
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 4 kDa | - |
Protein translocase subunit SecA
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Name: Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [11]
Biological process:
protein transport by the Sec complex protein targeting protein import intracellular protein transmembrane transport
Molecular function:
metal ion binding ATP binding helicase activity
Cellular location:
cell envelope Sec protein transport complex cytosol cytoplasm plasma membrane
protein transport by the Sec complex protein targeting protein import intracellular protein transmembrane transport
Molecular function:
metal ion binding ATP binding helicase activity
Cellular location:
cell envelope Sec protein transport complex cytosol cytoplasm plasma membrane
Natural source
Organism: Escherichia coli
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 95 kDa | - |
Recombinant Expression
Organism | Strain | Cell | Plasmid |
---|---|---|---|
Escherichia coli | - | - | - |
Cytoskeleton protein RodZ
Number of copies: 1
Name: Number of copies: 1
Natural source
Organism: Escherichia coli
Molecular weight
Experimental | Theoretical | Method |
---|---|---|
- | 5 kDa | - |
Recombinant Expression
Organism | Strain | Cell | Plasmid |
---|---|---|---|
Escherichia coli | - | - | - |