EMD-10073

Single-particle
3.1 Å
EMD-10073 Deposition: 17/06/2019
Map released: 09/10/2019
Last modified: 10/07/2024
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links

EMD-10073

Ribosome nascent chain in complex with SecA

EMD-10073

Single-particle
3.1 Å
EMD-10073 Deposition: 17/06/2019
Map released: 09/10/2019
Last modified: 10/07/2024
Overview 3D View Sample Experiment Validation Volume Browser Additional data Links
Name: ribosome nascent chain in complex with SecA
Complex [4]
Name: ribosome nascent chain in complex with SecA
Molecular weight
Experimental Theoretical Method
- 2 MDa -
Complex Portal [2]
Name: ribosome
Natural source [1]
Organism: Escherichia coli
Complex Portal [2]
Name: SecA
Natural source [1]
Organism: Escherichia coli
Name: nascent chain
Natural source [1]
Organism: Escherichia coli
RNA [3]
Name: tRNA-CCA
Number of copies: 1
Natural source
Organism: Escherichia coli
Molecular weight
Experimental Theoretical Method
- 894 Da -
Name: 23S ribosomal RNA
Number of copies: 1
Natural source
Organism: Escherichia coli
Molecular weight
Experimental Theoretical Method
- 934 kDa -
Name: 5S ribosomal RNA
Number of copies: 1
Natural source
Organism: Escherichia coli
Molecular weight
Experimental Theoretical Method
- 38 kDa -
Protein [32]
Name: 50S ribosomal protein L2
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Escherichia coli
Molecular weight
Experimental Theoretical Method
- 29 kDa -
Name: 50S ribosomal protein L3
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Escherichia coli
Molecular weight
Experimental Theoretical Method
- 22 kDa -
Name: 50S ribosomal protein L4
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Escherichia coli
Molecular weight
Experimental Theoretical Method
- 22 kDa -
Name: 50S ribosomal protein L5
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Escherichia coli
Molecular weight
Experimental Theoretical Method
- 20 kDa -
Name: 50S ribosomal protein L6
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Escherichia coli
Molecular weight
Experimental Theoretical Method
- 18 kDa -
Name: 50S ribosomal protein L9
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Escherichia coli
Molecular weight
Experimental Theoretical Method
- 15 kDa -
Name: 50S ribosomal protein L10
Number of copies: 1
UniProtKB UniProtKB UniProtKB PDBe-KB PDBe-KB PDBe-KB AlphaFold DB AlphaFold DB AlphaFold DB
Natural source
Organism: Escherichia coli
Molecular weight
Experimental Theoretical Method
- 17 kDa -
Name: 50S ribosomal protein L11
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Escherichia coli
Molecular weight
Experimental Theoretical Method
- 14 kDa -
Name: 50S ribosomal protein L13
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Escherichia coli
Molecular weight
Experimental Theoretical Method
- 16 kDa -
Name: 50S ribosomal protein L14
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Escherichia coli
Molecular weight
Experimental Theoretical Method
- 13 kDa -
Name: 50S ribosomal protein L15
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [6]
Natural source
Organism: Escherichia coli
Molecular weight
Experimental Theoretical Method
- 15 kDa -
Name: 50S ribosomal protein L16
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Escherichia coli
Molecular weight
Experimental Theoretical Method
- 15 kDa -
Name: 50S ribosomal protein L17
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Escherichia coli
Molecular weight
Experimental Theoretical Method
- 14 kDa -
Name: 50S ribosomal protein L18
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Escherichia coli
Molecular weight
Experimental Theoretical Method
- 12 kDa -
Name: 50S ribosomal protein L19
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Escherichia coli
Molecular weight
Experimental Theoretical Method
- 13 kDa -
Name: 50S ribosomal protein L20
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Escherichia coli
Molecular weight
Experimental Theoretical Method
- 13 kDa -
Name: 50S ribosomal protein L21
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Escherichia coli
Molecular weight
Experimental Theoretical Method
- 11 kDa -
Name: 50S ribosomal protein L22
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Escherichia coli
Molecular weight
Experimental Theoretical Method
- 12 kDa -
Name: 50S ribosomal protein L23
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Escherichia coli
Molecular weight
Experimental Theoretical Method
- 11 kDa -
Name: 50S ribosomal protein L24
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Escherichia coli
Molecular weight
Experimental Theoretical Method
- 11 kDa -
Name: 50S ribosomal protein L25
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Escherichia coli
Molecular weight
Experimental Theoretical Method
- 10 kDa -
Name: 50S ribosomal protein L27
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Escherichia coli
Molecular weight
Experimental Theoretical Method
- 9 kDa -
Name: 50S ribosomal protein L28
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Escherichia coli
Molecular weight
Experimental Theoretical Method
- 9 kDa -
Name: 50S ribosomal protein L29
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Escherichia coli
Molecular weight
Experimental Theoretical Method
- 7 kDa -
Name: 50S ribosomal protein L30
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Escherichia coli
Molecular weight
Experimental Theoretical Method
- 6 kDa -
Name: 50S ribosomal protein L32
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Escherichia coli
Molecular weight
Experimental Theoretical Method
- 6 kDa -
Name: 50S ribosomal protein L33
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Escherichia coli
Molecular weight
Experimental Theoretical Method
- 6 kDa -
Name: 50S ribosomal protein L34
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [5]
Natural source
Organism: Escherichia coli
Molecular weight
Experimental Theoretical Method
- 5 kDa -
Name: 50S ribosomal protein L35
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Escherichia coli
Molecular weight
Experimental Theoretical Method
- 7 kDa -
Name: 50S ribosomal protein L36
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [5]
Natural source
Organism: Escherichia coli
Molecular weight
Experimental Theoretical Method
- 4 kDa -
Name: Protein translocase subunit SecA
Number of copies: 1
UniProtKB UniProtKB PDBe-KB AlphaFold DB
Domains
Natural source
Organism: Escherichia coli
Molecular weight
Experimental Theoretical Method
- 95 kDa -
Recombinant Expression
Organism Strain Cell Plasmid
Escherichia coli - - -
Name: Cytoskeleton protein RodZ
Number of copies: 1
Natural source
Organism: Escherichia coli
Molecular weight
Experimental Theoretical Method
- 5 kDa -
Recombinant Expression
Organism Strain Cell Plasmid
Escherichia coli - - -
Ligand [2]
Name: MAGNESIUM ION
HET code: MG
Number of copies: 68
ChEBI DrugBank
Molecular weight
Experimental Theoretical Method
- 24 Da -
Name: ZINC ION
HET code: ZN
Number of copies: 1
ChEMBL ChEBI DrugBank
Molecular weight
Experimental Theoretical Method
- 65 Da -