Beggiatoa sp. PS

Taxonomy
Taxonomy database identifier: 422289
Superkingdom		Bacteria
Phylum		Proteobacteria
Class		Gammaproteobacteria
Order		Thiotrichales
Family		Thiotrichaceae
Genus		Beggiatoa
Species		sp. PS
Peptidase			View peptidase sequences from Beggiatoa sp. PS
Count of known and putative peptidases: 50, non-peptidase homologues 10
Completely sequences genomes from subspecies and strains				Protein coding genes
	To show all strains with completely sequenced genomes, click here.

Clan	Family	MEROPS ID	Peptidase or homologue (subtype)	MERNUM	Gene	Locus
AA	A1	unassigned	subfamily A1A unassigned peptidases	MER0495977
AA	A28	unassigned	subfamily A28B unassigned peptidases	MER0427832	BGP_3429
AA	A32	unassigned	family A32 unassigned peptidases	MER0241930		BGP_4246
AD	A24	A24.001	type 4 prepilin peptidase 1	MER0137827	pilD	BGP_5731
CA	C39	non-peptidase homologue	family C39 non-peptidase homologues	MER0144698		BGP_4768
CA	C39	unassigned	family C39 unassigned peptidases	MER0446033
CD	C11	unassigned	family C11 unassigned peptidases	MER0171737		BGP_0894
CD	C14	C14.048	bacterial metacaspase	MER0136472		BGP_0193
CD	C14	C14.A07	pcp (Dictyostelium discoideum)	MER0241315
CD	C14	unassigned	subfamily C14B unassigned peptidases	MER0172075
CD	C14	unassigned	subfamily C14B unassigned peptidases	MER0429424
CD	C14	unassigned	subfamily C14B unassigned peptidases	MER0429425
CD	C14	unassigned	subfamily C14B unassigned peptidases	MER0241305
CD	C14	unassigned	subfamily C14B unassigned peptidases	MER0241360
CD	C14	unassigned	subfamily C14B unassigned peptidases	MER0429426
CL	C82	C82.A01	LdtF protein (Escherichia coli)	MER0243975
CL	C82	unassigned	subfamily C82A unassigned peptidases	MER0462010
CL	C82	unassigned	subfamily C82A unassigned peptidases	MER0462011
GC	G4	non-peptidase homologue	family G4 non-peptidase homologues	MER0293156
MA	M1	unassigned	family M1 unassigned peptidases	MER0464976
MA	M3	M03.004	oligopeptidase A	MER0103312		BGP_5901
MA	M3	non-peptidase homologue	subfamily M3A non-peptidase homologues	MER0820141	BGP_5900
MA	M12	unassigned	subfamily M12A unassigned peptidases	MER0827646	BGP_0893
MA	M12	unassigned	subfamily M12A unassigned peptidases	MER0828411	BGP_3259
MA	M41	M41.001	FtsH peptidase	MER0105527	ftsH	BGP_0383
MA	M48	M48.002	HtpX peptidase	MER0118445		BGP_3789
MA	M48	unassigned	subfamily M48A unassigned peptidases	MER0277215		BGP_4825
MA	M48	unassigned	subfamily M48A unassigned peptidases	MER0295715		BGP_4824
MA	M48	unassigned	subfamily M48B unassigned peptidases	MER0180692		BGP_3191
ME	M16	non-peptidase homologue	subfamily M16B non-peptidase homologues	MER0171838
ME	M16	non-peptidase homologue	subfamily M16B non-peptidase homologues	MER0171839
MF	M17	M17.003	PepA aminopeptidase	MER0105870		BGP_2755
MG	M24	M24.001	methionyl aminopeptidase 1 (Escherichia-type)	MER0395940		BGP_1099
MG	M24	M24.037	At4g36760 g.p. (Arabidopsis thaliana) and similar	MER0180646		BGP_4151
MG	M24	unassigned	subfamily M24B unassigned peptidases	MER0105223		BGP_3658
MH	M18	M18.004	apeA putative peptidase	MER0341198	apeA	BGP_3883
MH	M18	unassigned	family M18 unassigned peptidases	MER0189153		BGP_3287
MH	M20	unassigned	subfamily M20A unassigned peptidases	MER0474817
MH	M20	unassigned	subfamily M20C unassigned peptidases	MER0303806
MH	M28	unassigned	family M28 unassigned peptidases	MER0105986		BGP_3678
MM	M50	non-peptidase homologue	subfamily M50B non-peptidase homologues	MER0890536	BGP_1417
MM	M50	non-peptidase homologue	subfamily M50B non-peptidase homologues	MER0898796	BGP_1418
MM	M50	unassigned	subfamily M50B unassigned peptidases	MER0895098	BGP_5795
MO	M23	M23.009	Mername-AA292 peptidase	MER0180242		BGP_1211
MO	M23	non-peptidase homologue	subfamily M23B non-peptidase homologues	MER0172189		BGP_1207
MO	M23	non-peptidase homologue	subfamily M23B non-peptidase homologues	MER0479527
MO	M23	non-peptidase homologue	subfamily M23B non-peptidase homologues	MER0479662
MO	M23	unassigned	subfamily M23B unassigned peptidases	MER0172134		BGP_4515
MO	M23	unassigned	subfamily M23B unassigned peptidases	MER0479451
MO	M23	unassigned	subfamily M23B unassigned peptidases	MER0189771		BGP_0318
MO	M23	unassigned	subfamily M23B unassigned peptidases	MER0478839
PA	S1	S01.A08	At5g27660 (Arabidopsis thaliana)	MER0216563
PA	S1	S01.A53	CG7432 protein (Drosophila melanogaster)	MER0487056	TRYP2
PA	S1	non-peptidase homologue	subfamily S1B non-peptidase homologues	MER0961804	BGP_5081
PA	S1	non-peptidase homologue	subfamily S1C non-peptidase homologues	MER0966787	BGP_4438
PA	S1	unassigned	subfamily S1A unassigned peptidases	MER0488530
PA	S1	unassigned	subfamily S1A unassigned peptidases	MER0180351
PA	S1	unassigned	subfamily S1A unassigned peptidases	MER0180520
PA	S1	unassigned	subfamily S1B unassigned peptidases	MER0963966	BGP_3466
PA	S1	unassigned	subfamily S1B unassigned peptidases	MER0210559		BGP_3405
PA	S1	unassigned	subfamily S1B unassigned peptidases	MER0406511
PA	S1	unassigned	subfamily S1C unassigned peptidases	MER0488529
PA	S1	unassigned	subfamily S1C unassigned peptidases	MER0327610		BGP_2007
PA	S1	unassigned	subfamily S1C unassigned peptidases	MER0244180		BGP_2780
PB	C44	C44.001	amidophosphoribosyltransferase precursor	MER0138977	purF	BGP_1316
PB	C44	non-peptidase homologue	family C44 non-peptidase homologues	MER0119217		BGP_3172
PB	C44	non-peptidase homologue	family C44 non-peptidase homologues	MER0458847
PB	C44	unassigned	family C44 unassigned peptidases	MER0458846
PB	C45	non-peptidase homologue	family C45 non-peptidase homologues	MER0725856	BGP_5255
PB	T1	non-peptidase homologue	subfamily T1B non-peptidase homologues	MER1094262	hslV
PB	T3	T03.001	gamma-glutamyltransferase 1 (bacterial-type)	MER0233323		BGP_6006
PB	T3	unassigned	family T3 unassigned peptidases	MER0142768		BGP_6007
PC	C26	C26.957	GMP synthase	MER0443343
PC	C26	C26.965	imidazole glycerol phosphate synthase subunit HisH	MER0445018
PC	C26	unassigned	family C26 unassigned peptidases	MER0440289	carA
PC	C56	C56.A06	DDB_G0276405 (Dictyostelium discoideum)	MER0141598		BGP_3171
PD	N10	unassigned	family N10 unassigned peptide lyases	MER0223677	dnaB	BGP_4701
PE	T5	non-peptidase homologue	family T5 non-peptidase homologues	MER1103142	BGP_0393
SB	S8	non-peptidase homologue	subfamily S8A non-peptidase homologues	MER0985076	BGP_5745
SB	S8	unassigned	subfamily S8A unassigned peptidases	MER0191934		BGP_1276
SB	S8	unassigned	subfamily S8A unassigned peptidases	MER0191935		BGP_1524
SB	S8	unassigned	subfamily S8A unassigned peptidases	MER0180204		BGP_0672
SB	S8	unassigned	subfamily S8A unassigned peptidases	MER0143349		BGP_4708
SB	S8	unassigned	subfamily S8B unassigned peptidases	MER0144385		BGP_4305
SC	S33	unassigned	family S33 unassigned peptidases	MER0381071	pip	BGP_1597
SE	S11	unassigned	family S11 unassigned peptidases	MER0180084		BGP_5376
SE	S13	unassigned	family S13 unassigned peptidases	MER0298513
SF	S26	unassigned	subfamily S26A unassigned peptidases	MER0105304	lepB	BGP_0739
SF	S26	unassigned	subfamily S26A unassigned peptidases	MER0333486		BGP_0738
SJ	S16	non-peptidase homologue	family S16 non-peptidase homologues	MER1033069	radA
SJ	S16	unassigned	family S16 unassigned peptidases	MER0109032		BGP_2637
SJ	S16	unassigned	family S16 unassigned peptidases	MER0109240		BGP_0984
SK	S14	S14.001	peptidase Clp (type 1)	MER0117981	clpP	BGP_1697
SK	S14	unassigned	family S14 unassigned peptidases	MER0491420
SK	S41	S41.004	C-terminal processing peptidase-3	MER0105222		BGP_5116
SK	S49	unassigned	subfamily S49B unassigned peptidases	MER1068433	BGP_5650
SK	S49	unassigned	subfamily S49C unassigned peptidases	MER1072385	BGP_3427
U-	U32	unassigned	family U32 unassigned peptidases	MER0172297	yegQ	BGP_2204
U-	U32	unassigned	family U32 unassigned peptidases	MER0404213

GENOME ANALYSIS: Comparison with 21 completely sequenced genomes from order Thiotrichales
Family	Comment
A1	significant presence (1 homologues)
A28	significant presence (1 homologues)
A32	significant presence (1 homologues)
C11	significant presence (1 homologues)
C14	significant presence (8 homologues)
C26	significant decrease in homologues (3 homologues)
C39	significant presence (2 homologues)
C45	significant presence (1 homologues)
C82	significant presence (3 homologues)
G4	significant presence (1 homologues)
M12	significant presence (2 homologues)
M18	significant presence (2 homologues)
M23	lineage specific expansion (8 homologues)
M28	significant presence (1 homologues)
N10	significant presence (1 homologues)
S1	significant presence (13 homologues)
S8	lineage specific expansion (6 homologues)
S41	significant presence (1 homologues)