Peptidase sequences for cocksfoot streak virus
>MER0021335 - potato virus Y-type helper component peptidase [C06.001] peptidase unit: 301-776 ( active site residue(s): 652,725 ) (cocksfoot streak virus) (Source: EMBL nucleotide EU119422) 1 MATSTMMVFGDFVTVVRQRGAVVKSKCLGIRCPGSDYMATLPNPTAGQKARSLNIASKVM 60 61 LNEYDRATAAAFATLSGVEAKAKIRHEESRICSVKKGVFGYKPYTKEFLRKRSLLRKQKD 120 121 DEERWFQAQPDSVVGKLVFDAQPQLIEDTTPKTVWPRATKKPRNTFTPRKLLWHECGDEL 180 181 MKAVQPTPYRQLEVIGNKRRHTHRISLRRIGWKSILKVQTRHETGLKVGLDLPTNEFQDQ 240 241 ILCRMLRTMPRLSVREVGSLTKGHSGCVIDDPENYHDRQPFVVRGRYNGILLPSTETLPR 300 301 IVFSGMTEYSQGDEFWAGFNETFVAKRKDPAHTGECRARDTVRQCGEAAGILWQGMFPCF 360 361 KITCGACQDQIGITADDIVKGELIDNLFDASANLERLRIQPSMSSTLKAVATKLKPAQDH 420 421 VQICQQIIQAIGDDNDGPARHLRLATEKFITLQASDAEKCSDISKNLLLVANFIKNRRDG 480 481 LVRGDVKEFKNKISNKAHVNPVLMCDNQLDANGNFVWGERSHHAKRFFDNFYTQVNVADD 540 541 YDAHVLRKHPRGTRRLAIDRLILQLDLKALQEHVVGFPIEREPVSSSCISKKYGAFVFTC 600 601 SCITLDDKTPLYSDIIMPTKQHLVIGNSGDSKLIDFPETYRDKLWIARDGYCYVNIFLAM 660 661 LVNINEVDAKNFIKTIRDRVIPQLKEWPTMRDLAASLHMLTVLFPDTRQAELPRILVDHK 720 721 NKMMHVVDSYGSSDIGFHILKAGTVSQLLPFMFDSTEGEMKNYQVGGTLENLSVMKAVQV 780 781 LIKSLWRPKLMNLVLTQEPFLIALAVVSPSVLIAMHTSGTFELAIERWLEDNQDIAVLFS 840 841 TLNSLAEKVSRSRFLVDQMHMIEESCEELRRLAWDIKFTSHSKPLLMSQLEVMCNRRIAD 900 901 GELTGLGFKVYNQDTYDRIEKKYINDIRDSWFALSLCAKFRYRWYAWRLHRYFTNKSLLS 960 961 DMEDFSASAYASVRDSGVRFREGITQRLASTYDVSTRACIDSTRFIMRRAVGAVAYCIPD 1020 1021 ILHMINTLIVVSLILAIAHQSVIFMADYRRLKQEQAFVQFQKETDEVAAVHALLTNKLGT 1080 1081 SPSEEEFIDHIEDTYPALKSTAMLMTYPMVKHQAKTHAEAKLEQIMACMALAAMMFDAQR 1140 1141 SDAVFKVLSKIKTVLTSAGQTVHHQMSTIDDSSDVTAEKLLTIDFETEHEAPPTKATFDV 1200 1201 TFSDWFDRQLKEGRTIPHYRQGGTFLEFTRATSVQVANTISHDPDVREFMIRGPVGSGKS 1260 1261 TSLPYELSKKGHVLIIEPTRPLVENVCAQLRQDPFFQDPTKRMRDNCTFGSSNITVMTPG 1320 1321 YALNLLGHNIDKLQNYKFIIFDECHVIDASTIAFYCLLHEYTYPGKIVKVSATPPGRESE 1380 1381 FHTQHKVDIIKQESLTFDEFATAQGRGTKVDMTKHGDNILVYVASYNDVDALGKLLIERG 1440 1441 YTVSKIDGRTMKSGNVKVETRGTSIRKHFIVATNIIENGVTLNVDAVVDFGLKVTAELDS 1500 1501 DMRTIIYKKTSISFGERIQRMGRVGRVKPGSGLRIGYTEKGVADIPTMVATEAAFLCFAS 1560 1561 GLPVVTQNASVDLLGKCTVRQARTMQLFELPPFFMVDLVRYDGVVHPEIHTILKQFKLKE 1620 1621 SELVLNTNAMPFAAVKKWYSAEDYQRLGNRNTLEPQVKIPFFVRNIPEKVYEDIWKVVSN 1680 1681 EKDSCCFPRISSASACKVAYTLKRDPLTIARTLGMIEHLITQERVKHEHYNTLSTNASSS 1740 1741 HGFTLSGITDQLRQKYMRDHSTDNIRILEEAKNKLCEFENLDMDLTNPEMLRNFGVLNIV 1800 1801 QHQTASKLSTALGLKGRWDGSLITRDIIVLGCVLIGGLLMVCEFFKWKKNEPVHHQGRSK 1860 1861 QQSLKFRKAREQKHGYEVYGNDGAVEREFGPAYTKREKKKGKTHGLGKKTRPFVNMYNFD 1920 1921 PTEYTIVRYVDNLTGETLDESIQTDITIVMEHFADIREQMVDNRHLDPADDRENLNATAY 1980 1981 FMHPHKESALKVDLTPHNPLLVGRRRISIAGYPERRGELRQTEDHTFVPMTEVPAPSSYV 2040 2041 DHETKSIVTGLRCYDPIAKNICKIVFTSDGTISDGYGIGYGSILIVNQHLFKRNNGSIKL 2100 2101 HSCRGTYTIPNSTVLKISPVKDRDIALVRLPQDFVPFPQKLQFSKPDTSMRICLVGAQFQ 2160 2161 TNHVTTEVSDASQTFPQPNSGFWKHWISTQEGHCGLPLVDVNSRVIVGIHSLGHDVVAVN 2220 2221 YMTSIPENFKEDYLEKLDELEWTKKWRYNTEAISWGGLKLSSEQPSGFFKPTKAVEPLPQ 2280 2281 FVSMQSREKRKWVAEALSDNLQVVASCPSQLVTKHVVKDRCQNFLLYLSLHPEANVYFQP 2340 2341 LLGKYGKSRLNKEAFVKDFTKYASPIIVGVVDCAVFEEAVGDVKLFLHNEGFHNLEYVND 2400 2401 EAAIFQSLNMKAAVGALYSGKKREYFEEYTLDDKAEIIKQSCERLYNGQLGLWNASLKAE 2460 2461 IRPMEKVSLNKTRTFTAAPLETLLAGKVCVDDFNNWFYTKHTECPWTVGISKFYGGWNEM 2520 2521 LTQLPDNWIYCDADGTRFDSSLSPYLINAVLEIRLSCMEDWDIGERMLENLYTEIVYTPI 2580 2581 LTPDGSVVKKFKGNNSGQPSTVVDNSLMVLIAMTYTLRKLGVTRNEQDSIIKFFINGDDL 2640 2641 IIAIKPEKEPLLNNFSKHFMDLGLDFDFSNRVTEKSELWFMSHQGIERNGILIPKLEAER 2700 2701 VVAILEWDRSVEPVHRLEAICAAMIEAWGNDELLLNIRLFYQWLLEMEPFKHLASIGKAP 2760 2761 YIAESALEHLYTGRKIEVNELKKYFHAHADYMNELIQLDSPYVSHQAGQTMNAGATPPTP 2820 2821 PAPPTPRPQAQQPPNPTVQTADDEPPAPQRQRDRDLTTGSSGTFTMPPPKIFHSKMRLPM 2880 2881 VKGKIIVNADHLKQYKPNQVDLSNARASQAQFEAWFTKVQEAYDVTDDQMSLLMDGLLVW 2940 2941 CIENGTSPNLTGNWYFMNNDVQDEYPLKPVIENARPTFRQIMMHFSNLAEAYIEMRNATE 3000 3001 VYIPRYALKRNLRDRSCARYAFDFYEKTSLSPEKAIEAQLQMKAAAIRGKSTRMFGLDGN 3060 3061 INSGEENTERHTTDDVTRDMHSLMGVRNT 3089 >MER0027287 - Johnson grass mosaic virus NIa peptidase [C04.011] peptidase unit: 2044-2285 ( active site residue(s): 2089,2124,2194 ) (cocksfoot streak virus) (Source: EMBL nucleotide EU119422) 1 MATSTMMVFGDFVTVVRQRGAVVKSKCLGIRCPGSDYMATLPNPTAGQKARSLNIASKVM 60 61 LNEYDRATAAAFATLSGVEAKAKIRHEESRICSVKKGVFGYKPYTKEFLRKRSLLRKQKD 120 121 DEERWFQAQPDSVVGKLVFDAQPQLIEDTTPKTVWPRATKKPRNTFTPRKLLWHECGDEL 180 181 MKAVQPTPYRQLEVIGNKRRHTHRISLRRIGWKSILKVQTRHETGLKVGLDLPTNEFQDQ 240 241 ILCRMLRTMPRLSVREVGSLTKGHSGCVIDDPENYHDRQPFVVRGRYNGILLPSTETLPR 300 301 IVFSGMTEYSQGDEFWAGFNETFVAKRKDPAHTGECRARDTVRQCGEAAGILWQGMFPCF 360 361 KITCGACQDQIGITADDIVKGELIDNLFDASANLERLRIQPSMSSTLKAVATKLKPAQDH 420 421 VQICQQIIQAIGDDNDGPARHLRLATEKFITLQASDAEKCSDISKNLLLVANFIKNRRDG 480 481 LVRGDVKEFKNKISNKAHVNPVLMCDNQLDANGNFVWGERSHHAKRFFDNFYTQVNVADD 540 541 YDAHVLRKHPRGTRRLAIDRLILQLDLKALQEHVVGFPIEREPVSSSCISKKYGAFVFTC 600 601 SCITLDDKTPLYSDIIMPTKQHLVIGNSGDSKLIDFPETYRDKLWIARDGYCYVNIFLAM 660 661 LVNINEVDAKNFIKTIRDRVIPQLKEWPTMRDLAASLHMLTVLFPDTRQAELPRILVDHK 720 721 NKMMHVVDSYGSSDIGFHILKAGTVSQLLPFMFDSTEGEMKNYQVGGTLENLSVMKAVQV 780 781 LIKSLWRPKLMNLVLTQEPFLIALAVVSPSVLIAMHTSGTFELAIERWLEDNQDIAVLFS 840 841 TLNSLAEKVSRSRFLVDQMHMIEESCEELRRLAWDIKFTSHSKPLLMSQLEVMCNRRIAD 900 901 GELTGLGFKVYNQDTYDRIEKKYINDIRDSWFALSLCAKFRYRWYAWRLHRYFTNKSLLS 960 961 DMEDFSASAYASVRDSGVRFREGITQRLASTYDVSTRACIDSTRFIMRRAVGAVAYCIPD 1020 1021 ILHMINTLIVVSLILAIAHQSVIFMADYRRLKQEQAFVQFQKETDEVAAVHALLTNKLGT 1080 1081 SPSEEEFIDHIEDTYPALKSTAMLMTYPMVKHQAKTHAEAKLEQIMACMALAAMMFDAQR 1140 1141 SDAVFKVLSKIKTVLTSAGQTVHHQMSTIDDSSDVTAEKLLTIDFETEHEAPPTKATFDV 1200 1201 TFSDWFDRQLKEGRTIPHYRQGGTFLEFTRATSVQVANTISHDPDVREFMIRGPVGSGKS 1260 1261 TSLPYELSKKGHVLIIEPTRPLVENVCAQLRQDPFFQDPTKRMRDNCTFGSSNITVMTPG 1320 1321 YALNLLGHNIDKLQNYKFIIFDECHVIDASTIAFYCLLHEYTYPGKIVKVSATPPGRESE 1380 1381 FHTQHKVDIIKQESLTFDEFATAQGRGTKVDMTKHGDNILVYVASYNDVDALGKLLIERG 1440 1441 YTVSKIDGRTMKSGNVKVETRGTSIRKHFIVATNIIENGVTLNVDAVVDFGLKVTAELDS 1500 1501 DMRTIIYKKTSISFGERIQRMGRVGRVKPGSGLRIGYTEKGVADIPTMVATEAAFLCFAS 1560 1561 GLPVVTQNASVDLLGKCTVRQARTMQLFELPPFFMVDLVRYDGVVHPEIHTILKQFKLKE 1620 1621 SELVLNTNAMPFAAVKKWYSAEDYQRLGNRNTLEPQVKIPFFVRNIPEKVYEDIWKVVSN 1680 1681 EKDSCCFPRISSASACKVAYTLKRDPLTIARTLGMIEHLITQERVKHEHYNTLSTNASSS 1740 1741 HGFTLSGITDQLRQKYMRDHSTDNIRILEEAKNKLCEFENLDMDLTNPEMLRNFGVLNIV 1800 1801 QHQTASKLSTALGLKGRWDGSLITRDIIVLGCVLIGGLLMVCEFFKWKKNEPVHHQGRSK 1860 1861 QQSLKFRKAREQKHGYEVYGNDGAVEREFGPAYTKREKKKGKTHGLGKKTRPFVNMYNFD 1920 1921 PTEYTIVRYVDNLTGETLDESIQTDITIVMEHFADIREQMVDNRHLDPADDRENLNATAY 1980 1981 FMHPHKESALKVDLTPHNPLLVGRRRISIAGYPERRGELRQTEDHTFVPMTEVPAPSSYV 2040 2041 DHETKSIVTGLRCYDPIAKNICKIVFTSDGTISDGYGIGYGSILIVNQHLFKRNNGSIKL 2100 2101 HSCRGTYTIPNSTVLKISPVKDRDIALVRLPQDFVPFPQKLQFSKPDTSMRICLVGAQFQ 2160 2161 TNHVTTEVSDASQTFPQPNSGFWKHWISTQEGHCGLPLVDVNSRVIVGIHSLGHDVVAVN 2220 2221 YMTSIPENFKEDYLEKLDELEWTKKWRYNTEAISWGGLKLSSEQPSGFFKPTKAVEPLPQ 2280 2281 FVSMQSREKRKWVAEALSDNLQVVASCPSQLVTKHVVKDRCQNFLLYLSLHPEANVYFQP 2340 2341 LLGKYGKSRLNKEAFVKDFTKYASPIIVGVVDCAVFEEAVGDVKLFLHNEGFHNLEYVND 2400 2401 EAAIFQSLNMKAAVGALYSGKKREYFEEYTLDDKAEIIKQSCERLYNGQLGLWNASLKAE 2460 2461 IRPMEKVSLNKTRTFTAAPLETLLAGKVCVDDFNNWFYTKHTECPWTVGISKFYGGWNEM 2520 2521 LTQLPDNWIYCDADGTRFDSSLSPYLINAVLEIRLSCMEDWDIGERMLENLYTEIVYTPI 2580 2581 LTPDGSVVKKFKGNNSGQPSTVVDNSLMVLIAMTYTLRKLGVTRNEQDSIIKFFINGDDL 2640 2641 IIAIKPEKEPLLNNFSKHFMDLGLDFDFSNRVTEKSELWFMSHQGIERNGILIPKLEAER 2700 2701 VVAILEWDRSVEPVHRLEAICAAMIEAWGNDELLLNIRLFYQWLLEMEPFKHLASIGKAP 2760 2761 YIAESALEHLYTGRKIEVNELKKYFHAHADYMNELIQLDSPYVSHQAGQTMNAGATPPTP 2820 2821 PAPPTPRPQAQQPPNPTVQTADDEPPAPQRQRDRDLTTGSSGTFTMPPPKIFHSKMRLPM 2880 2881 VKGKIIVNADHLKQYKPNQVDLSNARASQAQFEAWFTKVQEAYDVTDDQMSLLMDGLLVW 2940 2941 CIENGTSPNLTGNWYFMNNDVQDEYPLKPVIENARPTFRQIMMHFSNLAEAYIEMRNATE 3000 3001 VYIPRYALKRNLRDRSCARYAFDFYEKTSLSPEKAIEAQLQMKAAAIRGKSTRMFGLDGN 3060 3061 INSGEENTERHTTDDVTRDMHSLMGVRNT 3089 >MER0166363 - family S30 unassigned peptidases [S30.UPW] peptidase unit: 56-294 ( active site residue(s): 0,0,0,222,231,265 ) (cocksfoot streak virus) (Source: EMBL nucleotide NC_003742) 1 MATSTMMVFGDFVTVVRQRGAVVKSKCLGIRCPGSDYMATLPNPTAGQMVRSLNIASKAM 60 61 LDDYSKTTAAAFATLRNVEAKAKARHEESRICSVRKGVFGYKPYTKNFLRKRSLQQKQRE 120 121 DEEKWFQSQPDSIVGRIISYEQPQLIEEDTPRVVWPRALKKPRIASTPKKLLWNECGDEL 180 181 MKAVQPTSYRTLEVIGNKRRQTHRISLKRVNWKSVFKVETRHETGLKVGLDPPTSAFQNH 240 241 ILNRLLRITPRLSIREIENLTKGSSGYLIDDPDDYAARVPFVVRGRYNSILLPSTQILPR 300 301 IVMNGMVEY 309 >MER0376451 - family S29 unassigned peptidases [S29.UPW] peptidase unit: 1251-1499 ( active site residue(s): 0,0,0 ) (cocksfoot streak virus) (Source: EMBL nucleotide NC_003742) 1 MATSTMMVFGDFVTVVRQRGAVVKSKCLGIRCPGSDYMATLPNPTAGQMVRSLNIASKAM 60 61 LDDYSKTTAAAFATLRNVEAKAKARHEESRICSVRKGVFGYKPYTKNFLRKRSLQQKQRE 120 121 DEEKWFQSQPDSIVGRIISYEQPQLIEEDTPRVVWPRALKKPRIASTPKKLLWNECGDEL 180 181 MKAVQPTSYRTLEVIGNKRRQTHRISLKRVNWKSVFKVETRHETGLKVGLDPPTSAFQNH 240 241 ILNRLLRITPRLSIREIENLTKGSSGYLIDDPDDYAARVPFVVRGRYNSILLPSTQILPR 300 301 IVMNGMVEY 309 >MER0376461 - family S29 unassigned peptidases [S29.UPW] peptidase unit: 86-334 ( active site residue(s): 0,0,0 ) (cocksfoot streak virus) (Source: EMBL nucleotide NP_620483) 1 MSTIDDSSDVTAEKLLTIDFETEHEAPPTKATFDVTFSDWFDRQLREGRTIPHYRQGGTF 60 61 LEFTRATSVQAANTISHDPDIREFMIRGPVGSGKSSSLPYELSKKGHVLIIEPTRPLVEN 120 121 VCAQLRQDPFFQDPTKRMRDNCTFGSSNITVMTPGYALNLLGHNVDKLQNYKFIIFDECH 180 181 VIDASTIAFYCLLHEYTYPGKIVKVSATPPGRESEFHTQHKVDIIKQESLTFDEFATAQG 240 241 RGTKVDMTKHGDNILVYVASYNDVDALGKLLIERGYTVSKIDGRTMKSGNVKVETRGTSI 300 301 RKHFIVATNIIENGVTLNVDAVVDFGLKVTAELDSDMRTIIYKKTSISFGERIQRMGRVG 360 361 RVKPGSGLRIGYTEKGVADIPTMVATEAAFLCFAFGLPVVTQNASVDLLGKCTVRQARSM 420 421 QLFELPPFFMVDLVRYDGVVHPEIHTILKQFKLKESELVLNTNAMPFAVVKKWYTAEEYQ 480 481 RLGNRNTLEPQVKIPFFVRNIPEKVYEDIWKVVSNEKDSCCFPKISSASACKVAYTLKRD 540 541 PLTIARTLGMIEHLITQERIKHEHYNTLSTNASSSHGFTLSGITDQLRQKYMRDHSTDNI 600 601 RILEEAKNKLCEFENLDIDLSNPEMLRNFGVLNIVQHQ 638
