Peptidase sequences for Cupriavidus necator

>MER0054472 - TraF peptidase [S26.014] peptidase unit: 19-178 ( active site residue(s): 38,90  ) (Cupriavidus necator) (Source: EMBL nucleotide AY365053) 
1        MSRILKRIAAGVVIAGVAALLLAAGGYAAGARVNTTKSIPVGLYWTSSAPVEKGAYVLFC       60
61       PPQLGVFDDAKERGYIGAGFCQGGYGYMMKRVLAAKDDAVAVADDGVRVNGELLPLSAPI      120
121      KADKAGRPLPRYQSNSYTLGNSEVLLMSDVSATSFDGRYFGPINRSQIKTVIRPVITW        178

>MER0054795 - family M20D unassigned peptidases [M20.UPD] peptidase unit: 18-407 ( active site residue(s): 97,154 metal ligand(s): 95,123,155,379 ) (Cupriavidus necator) (Source: MEROPS) 
1        MSEHAPEIESYLGTSLKRRFCALADTLDSRDELEAIRRNIHQNPELAFDEVRTSGLVASL       60
61       LEGWGYTVTRGVGGTGLVGTLKAGTGGRSVGIRADMDALPIHERTGLPYASVNEGRMHAC      120
121      GHDGHTTILLGAAKQLARTLNFNGTVHLIFQPAEEIGAGGGAERMLADGLFYRFPCDAIF      180
181      GLHNHPGVEQGNFLFRSGPFMAACDTVTITIRGKGGHAARPHQSVDPILVAGSLVMALQS      240
241      VVSRYVDPNETAVVTIGTLHAGHAPNVIPDSARMEISVRSFSPDVRASLETRIRQMAIAH      300
301      AEGYGAVAEVNYVHGYPVLINSERETEFARQIAEELVGADKVVSQAARITGSEDFAYYLQ      360
361      QRPGCFVRLGNGANQPLLHNPAYDFNDENLTVGAAYWTRLVERYLAR                   407

>MER0052894 - pyroglutamyl-peptidase I (prokaryote) [C15.001] peptidase unit: 2-216 ( active site residue(s): 80,143,168  ) (Cupriavidus necator) (Source: UniProt Q477F9) 
1        MRTVLLTGFEPFENEPINPSWEAVRALDGERIGDAVVVARQLPCVFGAAIDGMAALLREL       60
61       KPAIAIAVGQAGGRTEMSVERVAINVDDARIADNAGAQPIDTVIAAKGPAAYFSTLPIKA      120
121      IVRDMRAAGVPAAVSQTAGTFVCNHVFYGLMHALATPAGEGVRGGFIHIPYLPEQAARHP      180
181      GEASMSLESMVRGIRQAIATTLATEVDVREQGGQLH                              216

>MER0052895 - subfamily M48C unassigned peptidases [M48.UPC] peptidase unit: 18-278 ( active site residue(s): 161 metal ligand(s): 160,164,217 ) (Cupriavidus necator) (Source: MEROPS) 
1        MSRHLPGVPRPVLSRMACALSMGAAMSMAPLALAQEDPGQEDGIRLQRGGSAVKNIVPVE       60
61       VIEQQAAQEYEQIKQEAIAKHALAGDSNAQLQRLRAIGKRLLPETTRWNERARQWQWEIN      120
121      LIGSKQVNAFCMPGGKIAFYTGLLEQLKLTDDEIAMAMGHEIAHALQEHARERAAKSEIT      180
181      NLGANVVSQLFGFGNLGNMALGTGAHLLTLRFSRADESEADLIGMDIAARAGYDPRAAVT      240
241      LWQKMAKVTQSGADFLSTHPSGRTRIADLEKHMPEVLPLYARAINTTVDRLPPYRANMAN      300
301      LGDAPVDAGDDDRQRPLKR                                               319

>MER0052896 - C-terminal processing peptidase-3 [S41.004] peptidase unit: 197-386 ( active site residue(s): 315,340  ) (Cupriavidus necator) (Source: MEROPS) 
1        MRKTLKNISLVSVGLVAGVLATLQISATAQNSAGPLPLDQLRLMADIFGQIKREYVEPVD       60
61       DKKLLTEAIKGMVASLDPHSAYLDEKDFKELQEGTRGRFAGLGIEISQEEGLVKVINPIE      120
121      DTPAFRAGIQPGDLITRIDDKPVRGLPLEQAVKRMRGEPGTKVTLTIYRKSEERTFPISI      180
181      TRAEIRVQSVKTKMLDNNTIGWVRLTSFQERTVGDLGRRLNEMAQKNPGLKGIVLDLRNN      240
241      GGGVLQGAVGVAAAFLPDDSTVVSTNGQVPDAKRVYKATFNNYRLSSLEDDPLKDLPALY      300
301      KKIPMVVLTNAYSASASEIVAGALQDHHRALIMGKTTFGKGSVQTVRPLTNDTGIKLTIA      360
361      YYYTPTGKSIQAKGIRPDIPVDQNPEGDPDDALITREIDTERHLHNKQESEEPEMNEREQ      420
421      RRVEELRRLEEENAKKTPEEREKERRKKPIEFGSADDFMLQQAIAQLDGRPVKRSKSKLE      480
481      TNPPADKPAKAAPAKKGASAPAAKPAAPAPGKQPPASAPIGEPLGTPTGKAP              532

>MER0054274 - YMXG peptidase [M16.019] peptidase unit: 79-309 ( active site residue(s): 122,192 metal ligand(s): 119,123,199 ) (Cupriavidus necator) (Source: MEROPS) 
1        MNHRTVVTGTGGTRPKPIPAPAECRARLERLARRALPVLLLAALPWTAGAQTPRTVASPM       60
61       PSGQTAPVDATAQGTTEYKLSNGLRLIVKEDHRAPTVAHQIWYRVGGIDEVSGTTGVAHM      120
121      LEHMMFKGTPKVGVGEFSKQVAALGGRENAMTNRDFTLYYQQIGKQYLPKMMELEADRMA      180
181      NLIFNKGEFDREMKVVMEERRLRTDDSARGTVYEQLLANVYVAAPYRHPVIGWMDDLVNM      240
241      RLEDVQSWYRSWYVPNNATVIVTGDVNPAEVRALAERYYGKLKPRPLPLRKEQIDPPQLG      300
301      IKRVWVKAPAENPYMVMAYKVPRLRDVEKDVDPYALEVLAAVLNGYDNARLTRELVREQR      360
361      LADDVNVGYDSINRGNSLFVLDGTPADGHTTEQIEAALREEIQRIARNGVSPEELKRVKA      420
421      QVVASQIYKRDSVFGQGMEIGVAEISDISWRKIDRILDKIKEVTPAQVQAVAAKYFTDDN      480
481      LTVATLLPQPIDPNKPKAKAPEGLRH                                        506

>MER0054797 - subfamily M16B unassigned peptidases [M16.UPB] peptidase unit: 43-280 ( active site residue(s): 86,164 metal ligand(s): 83,87,171 ) (Cupriavidus necator) (Source: MEROPS) 
1        MSLSDITIPSPRALRRLAGAALGALALLATQCALAAIPIEHWTASTGAQVFYVHSPSIPM       60
61       LDINVDFDAGSRYDPAGKAGLATLAAALLDKGAAARNGQPARDEAQIADAFADTGAVFGG      120
121      AAGGDRGGIGMRTLTAQPELDQSVALAMQLIQAPTYPDAVVGREKQRLISAIREADAKPG      180
181      VIADKALAKAMYPGHPYGVSATQASVESISRDDIVKFWRDNYGASRAVVTLIGAIDRKQA      240
241      EAIAEKLTGGLPPGSAAPAMPQVQMTIPASEQRVPHPAQQAAVVTGQPSMARGDPDYFAL      300
301      LVGNYVLGGGGFSSRLTDEVREKRGLTYGVDSYFAPSKQAGPFGISLQTKKEQTNEALAL      360
361      VRQVLTRFVTEGPTDAELKAAKDNLVNGFPLRIDSNRKLLTNVANIGWYGLPLDYLDTWT      420
421      AQVGKVTRQQVQAAFQRHVHPNAMATVIVGGPE                                 453

>MER0054798 - DDB_G0276405 ({Dictyostelium discoideum}) [C56.A06] peptidase unit: 29-186 ( active site residue(s): 92,118,119  ) (Cupriavidus necator) (Source: MEROPS) 
1        MAKKILMLAGDFAEDYETMVPFQALQMVGHTVHAVCPDKKAGDNCATAIHDFEGDQTYTE       60
61       KRGHNFTLNATFAEVDPAAYDALVIPGGRAPEYLRLNARVLEIVQHFASNNKPIAAVCHG      120
121      AQLLAAAGVLEGRTCSAYPACAPEVKLAGGKYADIPVDQAHTDGNLVTAPAWPAHPAWLA      180
181      QFLAVLGTRIVH                                                      192

>MER0052897 - Mername-AA292 peptidase [M23.009] peptidase unit: 296-433 ( active site residue(s): 407 metal ligand(s): 327,331,409 ) (Cupriavidus necator) (Source: MEROPS) 
1        MWSRLREVFARELVVLVDPTNPQHARRRKQLTASVGAIFTLGMAAAMGVAPRSAFNDPLA       60
61       PRVNEPLRMPDVREQLEQISDIDTDAVYVRQERMQRGDTIGSLLRRLGVDDPDAQAFILK      120
121      NPTARGLFNVNPGQAVQAEIDDSNMLVSLQANLGGNAATSRELVIERVEPAKAGGTTTYK      180
181      ARVQNVDNDLRYEMASGSISSGGFFKAMDAANVPDDIVQQMLSIFSGVIDFQHDIASGDR      240
241      FRIIYEAGFQDGAFIRNGRVVAIELINRNQLHQALWFAPEGESNGAYYTFDGRSMKRPFL      300
301      RSPVEFSRVSSGFGGREHPLHHAWAQHKGVDFAAPTGTKVLATGEGTIDFVGQQNGYGNI      360
361      IILKHANGYSTYYAHLSGFAGVQQGQRVTQGQVIGYVGQTGWATGPHLHYEFRFNDVPQN      420
421      PLSIALMEAPVLTGKARQEFLGYTSEMLGRINALRTYNVLTAAN                      464

>MER0054799 - D-Ala-D-Ala carboxypeptidase PBP3 [S13.003] peptidase unit: 54-504 ( active site residue(s): 94,97,343  ) (Cupriavidus necator) (Source: MEROPS) 
1        MAAMPKRITVFCAAALLLAATQPPVLARPAKAIKTSASARADGALVRAGLPAPVATALQR       60
61       AHVPASAASFYVVKIGAPQARASWNAQQPMNPASTMKLVTTFAGLQLLGPDYRWQTSLYA      120
121      DSQPAGDGTVNGNVYLRGRGDPKLVPEEMAKLVATARAAGATTINGDLVLDRSFFADGLN      180
181      GNGTIDGEVQRAYNVSPDALLYAFKTLSFTLTPNDASQTVAVSVTPALAQLRLDNRLTLT      240
241      NGRCGDWQSSATPTVAPQADGTVLASFSGNYSSDCGEHVLNIAALSHAEFTWGGFVAEWQ      300
301      AAGGRFTHVPAMRSGSVPRGAVLLARHYGQPLGAIVRDINKYSNNVMARQLFLTIGAEMD      360
361      RSGPASTARSTRVVQRWLSRQGLDMQGLVLDNGSGLSRDERISAYDMARLLQQAAASNVG      420
421      PTLVDSLPILGVDGTLRNRLTRANAAGNAYLKTGTLQDVRALAGYVDALNGERYVVVSFI      480
481      NHPNASQAQEAHDALMQWVYRGAP                                          504

>MER0052900 - subfamily M48C unassigned peptidases [M48.UPC] peptidase unit: 75-347 ( active site residue(s): 223 metal ligand(s): 222,226,274 ) (Cupriavidus necator) (Source: MEROPS) 
1        MIPVTYFDGRSSRAHPATLAVDAGQAVLRDADGAELRRASLSSLRVSERVRRAPRLVTFA       60
61       DGAFCQVSDHAAFDRLLADTGHQEGWVARAQNSWRMAGMAVAALVAVLVLGYYVLLPWSA      120
121      AHMARAVPPALEAQLGRATLASLDNGLVDPTRVPPAEQARIRTGFASLKRPEDPGHDYQI      180
181      VFRRGGRLGANALALPGGTIVVTDELVGIAGTGAGMLGVLAHEAGHIAQRHGLQQVIQAS      240
241      AVGALAAYMFGDFSSVLAGVPAAMLTLRYSREHEREADAYAIEIMQRNRLPPSALADVLV      300
301      ALENQNRSGDKKEAPPRAHEEEPPLDDFLSTHPHTRERIEALRAAGS                   347

>MER0079790 - subfamily M48A unassigned peptidases [M48.UPA] peptidase unit: 153-427 ( active site residue(s): 288 metal ligand(s): 287,291,369 ) (Cupriavidus necator) (Source: MEROPS) 
1        MVAAASPTRLLPMFTLIFLAALVVMVLTKLWLAARQVRYVGQHRNAVPPRFADTIALPSH       60
61       QKAADYTIARTRLSMLEVLAGAAVLIGFTMLGGLQWLNQFWLDMFGPGYAYGVALIASVA      120
121      LIGGLVDLPFSLYGQFGIEERFGFNKMTFGLWLADMVKMLLVACVLGLPLLLAVLWLMDR      180
181      TGSLWWVWTWLVWMAFNLLLLIVFPTFIAPLFNKFEPLTDESLRQRIEALMKKCGFASKG      240
241      LFVMDGSKRSAHGNAYFTGFGAAKRIVFFDTLLGRLSGDEIEAVLAHELGHFKRRHVAKR      300
301      IAVTFALSLVFLALLGWLSTRTWFYTGLGVAPNLGVSNSALALVLFFLTLPVFTFLLGPL      360
361      SSQSSRKHEFEADAFAADQTNAGHLVSALVKLYKDNASTLTPDPLYSAFYYSHPPAAQRI      420
421      DRLLAHA                                                           427

>MER0052901 - family M103 non-peptidase homologues [M103.UNW] peptidase unit: 67-438 ( active site residue(s): 269 metal ligand(s): 268,273 ) (Cupriavidus necator) (Source: MEROPS) 
1        MTPPSMDSIAEQTAHFTHTQAQLSEMAADVLRVARELGATDAATEISEGSGLSVSVRKGQ       60
61       VETIEQNRDKVVGVTVLIGKRRGNASTSDFSPAALRATAEAAYNIARFTAEDDCAGLAEE      120
121      ELLERNPQDLDLFHPWTVDAEGAIDIARRAEAAAFAVSPRIKNSDGASVSAQHSQFVLAT      180
181      TRGFIGGYPYSRHFISCAPIAGSGGGMQRDDWYSSKRSPLALAVPEDIGRYAAERALARL      240
241      NARKLSTRRCPVLFEAPLAAGLLGAFVQAVSGGALYRKSTFLHDTLGKAVFAPHIQIHER      300
301      PHVPGAMGSAPFDEEGVRTRERDVVRDGVVEGYFLSTYSARKLGMKTTGNAGGSHNLTLT      360
361      SDLTTASDDFRGMLKKLGTGLLVTELMGQGVNYVTGDYSRGASGYWVENGEIQYPVEEIT      420
421      IAGNMGEMFRQIVAIGADSLVRGTKETGSILIEQMTIAGN                          460

>MER0052902 - family C39 unassigned peptidases [C39.UPW] peptidase unit: 320-461 ( active site residue(s): 332,338,411,427  ) (Cupriavidus necator) (Source: MEROPS) 
1        MSSKPASEGAAAAEVPSPAAAPASPAAGASLADFLSTVEILSALTREELEQLAAAAQTQT       60
61       FGFGDTVCNAGEPAPGLYIIKAGSVRVFNEEHGKEISMGVRKTGEVFADVGLLRDYHHES      120
121      SVRASGKTELLMIPRSVGEKVVARNQAALAFITSYVAISSAGGFVARLFDLRGKLDRREL      180
181      EDAVRSVGVKRVAAGKEILKQDGRDDRRLYVVRQGAVRIVRNEDDDEFPLATLGQGDIFG      240
241      ERACVMRQEQIASAIAETDVRLLVIPEKTVQLILERNPRLREVLEERIRVVDRELHRQKK      300
301      LAERRKRPVLLDLQSKPELGERLIRRFALVEQAEEMDCGAACLAMICRHYGIPMSLGKLR      360
361      ELANVTTQGATLESLARAGESLGFTTRGVQCTRESLMGFELPFIVHWEGYHYVIVYGVSA      420
421      RWVWVADPGIGFRKMSAEEFERGWSGTCLLFSPGESMAQLSVQRSPWLRFISYLAPYKKI      480
481      LAHLFLATFVIQVLGVVPPLIIQNILDGVVVHQNIGLLHLLIVGLIIANLFSQLMSTIRA      540
541      YLANFMVRNMDFAMMSHFFKHTLSLPLSFFAKRKTGDIFARFQENQTIRAFLTESTVTTA      600
601      LNLLMVFIYFTIMFLYNVKLTLLLIAFVIPIAALTVVVTPKVKTYAREVFAASTDAKAYL      660
661      METLGGAETVKGMGIERPVRLRWEAKYAKALEKQYQAQAFHILVGMISQLLNAATTIAVL      720
721      WVGATLVLQRELTIGQLIAFNAFMGSVLAPLMGLVALWGQLNDAGVAMERLGDVLDLEPE      780
781      QKPQDVMSRVLLPDLQGEIEMNGLYFRYGGEDTAYVLENISLHIKPGEMVAIVGRSGSGK      840
841      TTLAKLLVGFYRPTEGSMKVDGYEIGMIDTEFYRAQVGYVMQTNLLFSGTIAENIACGDE      900
901      SPDRRRIEEVARMADAHPFITKLPLGYEQIVGERGMGLSGGQIQRLCIARALYHDPRLLV      960
961      FDEATSALDTQSESNILANMQEILRGRTAVIIAHRLSTIMQADKILVLYEGAVVEQGRHD     1020
1021     ELLDRKGMYYQLVQKQLSSA                                             1040

>MER0101166 - gamma-glutamyltransferase 1 (bacterial-type) [T03.001] peptidase unit: 55-625 ( active site residue(s): 439  ) (Cupriavidus necator) (Source: MEROPS) 
1        MAHLLASRLAWRGSIIVTFTALMAACGTQSGAPAAPAAPAAPQPPATATLPPAPEIASGY       60
61       RTDMSTVYAEKYMAAAANPLATEAGRDVLRQGGSAIDAAIAMQAVLTLVEPQASGVGGGA      120
121      FIMYWDGKRVQAFDGRETAPAGATENLFLRPDGKPMEFSEAQIGGRSVGTPGVLRALEMA      180
181      HREHGKLKWSQLFQRAISLAEKGFPISPRLYAQVASDKFMSNSPEMSAYFLDAQGKPKPA      240
241      GTILKNPQLAQTLRAIAANGPNALYTGPIARDIVTKVNGSLNPGSLSTRDLVNYRAKLRV      300
301      PVCTDYKRWKICGMPPPSSGGIALAQILGTLQALETRNPKYALAALKPSAVSTPAVLEAN      360
361      PDAVHAIAEADRLAYADRGLYVADSDFVQVDIAGMVNPAYLEQRASLISDKSMGKAQPGV      420
421      PPGTSVAFAPDRSPPRISTSQIVAVDSRGGAISMTTTVESYFGSHIMVRGFMLNNQLTDF      480
481      SFLPSENGKPVANRVEPGKRPRSSMAPTLVFDRESGKFLGTVGSPGGSQIIEYVSKTLVG      540
541      LLDWNMDVQAAIGMANFGSRNGPTELEKGLVTPALAEALKQRGHQVAEIEMTSGTQAIMR      600
601      RQRADGRLVWAGGADPRREGVAMGD                                         625

>MER0052903 - subfamily M14D non-peptidase homologues [M14.UND] peptidase unit: 103-237 ( active site residue(s): 225 metal ligand(s): 170,173 ) (Cupriavidus necator) (Source: MEROPS) 
1        MTSGLHISTSFDSGAIEVDALDHADDIRLRIRADSHADFRQWFHFRLQGAAGQACRLQFL       60
61       NAGDCTYPDGWRDYRAVASYDRANWFRVPTRFDGQVLTVEFTPQHDSVWFAYFEPYPEER      120
121      HLSLLATCQRSPLAKLSHLGSTVDGRDMTRVTVGQPGPGKKTIWMIARQHPGESMAEWFC      180
181      EGVLQRLTGTGMWAHDPVARKLLESAVFHIVPNMNPDGSARGNLRTNAAGANLNREWMTP      240
241      SPETSPEVWHVRRAIEATGCDLFFDIHGDEGLPYNFVAGSEMLPSFSEKQREEQTRFIEA      300
301      FKRVTPDFQDVHGYAASKYNADALKLASKYVGHTFGCLSLTLEMPFKDNADLPDATVGWN      360
361      GARSALLGTAMLEAILNFLG                                              380

>MER0054275 - peptidase MprA ({Burkholderia}-type) [S08.107] peptidase unit: 159-509 ( active site residue(s): 197,262,363,448  ) (Cupriavidus necator) (Source: MEROPS) 
1        MFMPHPSHPVSRPGRAAAARWSAAVLALLSWTACIPAAAAGDGVRAAPVYTGNVIVRWRD       60
61       ANIVPSASGVGGASSVMADAKQAATASEDRLERLRNQSGVNLAVRRSMAGNMQLLGTADG      120
121      SQTDPEGLAARLRQDPRVADAVPDRWLHLHDTLPNDPEFASAQPYMMGTGTVTGGANLPH      180
181      AWDRSRGSTNMVVAVLDTGTLPHPDLVAKLLPGYDFISSTTISNDGDGRDSDATDAGDNV      240
241      PQGFMCPGASTPTQEATPNSWHGTRVAGVLGAVTNNALGIAGVDWNTRILPVRVSGRCGA      300
301      LLSDTVDGLRWAAGINVPNVPDNPNPARVVNISLGGGTCTSIEQQAINDVVARGVSVVVA      360
361      AGNNAGALEAPADCSGVIAVTAHANDGENASYANVGPKVTISAPGGGCGNSKVVNGTCTT      420
421      TLSFIRTLFNNGTTSLGAYTISNSQGTSFAAPMVSGVVSLMLAVNSSLTPAQVTAALKSS      480
481      ARPHPSGTFCTTNPGVCGAGLLDADGALSAAANVSAAPPAASQSSGGGGGGLVAPWLAAA      540
541      LGVIGMLAFALRRRG                                                   555

>MER0054802 - subfamily M23B non-peptidase homologues [M23.UNB] peptidase unit: 147-242 ( active site residue(s): 220 metal ligand(s): 149,222 ) (Cupriavidus necator) (Source: MEROPS) 
1        MTPTRQDSADTAGRRRMLGWMLAAASAALAAGCGTMSTEPAPEGFYRVESGDTLYSIARK       60
61       HRRNVRDLVRWNNLPSADRIEVGQLIRVKPPGAGTATASAGSSSQTVTDTPRVDAGGESK      120
121      PPSSAPRLQWPADGKVTARFAPPASKGLTIAVPPGGTVKAAAAGWAIHVGDLRGYGMLVI      180
181      VKHSDDWLTVYGNLDKPLVSEGARVAAGQDVGRMGSAGADLHFEVRGNGKPVDPANYLPA      240
241      RG                                                                242

>MER0054803 - subfamily M50B unassigned peptidases [M50.UPB] peptidase unit: 11-206 ( active site residue(s): 24 metal ligand(s): 23,27,156 ) (Cupriavidus necator) (Source: MEROPS) 
1        MDSSLIQTFAVYALPVLFAITLHEASHGYVAKHFGDTTAYALGRVSLNPARHIDPIGTIA       60
61       VPLLLYLLTSGQFVFGYAKPVPVDFGRLRNPRWHGMWVALAGPVSNIVQAFLWALIAIGL      120
121      AWARVSEPFFSEMARAGVLVNLVVAAFNLFPIPPLDGGRVLTALLPPRVAYSVSRIEPYG      180
181      IFVVLALVAAGVITSVWMRPVINLLSSVVELMLRPIIMLLQ                         221

>MER0079791 - subfamily M3A unassigned peptidases [M03.UPA] peptidase unit: 6-690 ( active site residue(s): 477 metal ligand(s): 476,480,506 ) (Cupriavidus necator) (Source: MEROPS) 
1        MDQAVNNPLLDFTDLPRFSEIRPEHISPALDVLLERAQAAVARAEDPATPADWGNAVEAL       60
61       ETATEPLGRAWGVVGHLSAVADTPELRKAHAENLPRMTEFWSSLGQSLALYEKYKALAAS      120
121      PEFAGMDAARHQLIENELRGFRLGGAELPEDKKPRFAEIQEHQAQLSKAFSDHVLDATNA      180
181      YALIIEDPARLSGLPEDAKEAARHAAEKDGKAGWKFTLHFPSYFPVLQYADDRALRQTLY      240
241      EANVTRASAQAPQYGNGQADWDNTDNMREQLALRREEAQMLGYQCYGEVSLVPKMAESPA      300
301      EVLKFLDELAVKARPYAEKDWAELRAFAAAELGLAELAPWDVAYASEKLREQRYAFSEHE      360
361      VKQYFPEHKVLQGLFGAVERLFSVKIQPDQSQTWHKDVRFFRVSATDGTLLAQFYIDLYA      420
421      REGKRGGAWMDDARGRKILADGEVQTPVAYLTCNFSSPVGDKPALFTHDEVITLFHEFGH      480
481      GLHHMLTQVGELGVSGINGVEWDAVELPSQFMENFCWEFEVLSGMTQHVDSGEPLPRALF      540
541      DRMLAAKNFQNGMMTLRQIVFSSFDMHLHTDFDPQGAKSVLDLSREINDRVHVVPQYPLS      600
601      RWPNTFSHIFAGGYAAGYYSYKWAEVLSADVYAAFEEAAQLSGTVLDSETGARYQREILS      660
661      VGGSRPAMDSFVAFRGRAPQIDALLRHGGMAA                                  692

>MER0079792 - subfamily T1B unassigned peptidases [T01.UPB] peptidase unit: 3-188 ( active site residue(s): 3  ) (Cupriavidus necator) (Source: MEROPS) 
1        MTTCVVVRKGAEVAIAADALVTFGDTRLSRAYERNQKVFPIGDSFVALAGTTAHFPVMRA       60
61       LLAGMGEECRLGSRDDVFRTFLKVHEKLKSEYFINTKEDEDDPYESSQIVCLIANPAGIF      120
121      GVYSYREVFSFDRFWGIGSGRNYALGAMHAVYDKPDLDAAAVARIGVDAGIEFDKSSAGP      180
181      IEVHTVRLHEAGAAGAAATNNDGAP                                         205

>MER0052904 - family M20D unassigned peptidases [M20.UPD] peptidase unit: 45-454 ( active site residue(s): 123,189 metal ligand(s): 121,157,190,428 ) (Cupriavidus necator) (Source: MEROPS) 
1        MAVRRTASRSTQSLVLAGLALAAAVLCNAANAQSAAPATSADDLHAQIETRAKAVEAQLI       60
61       AWRRDIHQHPELGNYETRTAKLVADHLRKLGMDVKTGVAKTGVVGVLKGGKPGPVVALRA      120
121      DMDALPVKERVDVPFASKAKGQYLGKEVDVMHACGHDTHVAILMATAEVLAGMKDQLPGT      180
181      VKFIFQPAEESPADIEPNGKNMWGAKQMVAEGVLDNPKVDAIFGLHVAAGMESGKLGWRS      240
241      GASMAAADQFWIDVKGRQTHGARPWAGVDPIVVASQIVMGLQTIQSRQVNAMLEPSVITV      300
301      GTIHGGNRMNIVPEQVEMMGTVRTYDEGMKKDIHARMKRTTETIAASAGAEATFRVVELY      360
361      NATVNQPVLTEKMAPTLRRVAGEGNWLTMPKATASEDFSFYQEKVPGLFFNLGVTPKGTD      420
421      LAKAASNHSPEFYVDEPALVNGVRALSNLTVDYMTMAQR                           459

>MER0079793 - family S10 unassigned peptidases [S10.UPW] peptidase unit: 47-500 ( active site residue(s): 199,445,480  ) (Cupriavidus necator) (Source: MEROPS) 
1        MSPTTRKEVPSDEPLIDTTPYGYGPDDLVTDVTETAAITQHTLKLHGKSLAYTARAGHLV       60
61       TTDPYSAMPAAKLFYVAFTLNGTAASKRPVTFFYNGGPGSSSVFLLLGSFGPRRIKTSMP      120
121      GFTPPAPYEMEDNEDCLLDHTDLVFINPVGTGYSGAVAPGTNKDFWGVDEDASCIKQFIK      180
181      RYLTVFNRWNSPKYLFGESYGTPRTCVLTWLLHEDGVDLNGIVLQSSILDYSQAGNPIGL      240
241      LPTLAADAWFHKMVTLSPVPAELATFMDDVEAFAIDAYVEALSGFPKFDQKSLEYLSAIL      300
301      GIPQEVLRYWKLDPSTANGSVFLTSLLLDKGLAVGAYDGRVTAQDTGIAEYIAPNSGGND      360
361      PTMTAVGGVYTAMWNVYLNEELQFTSTSPFMDLNDEAFLNWNFGHVDPTGAQRGGVESLY      420
421      TAGDLAAAMALNPYLRVFSANGYYDAVTPFFQTILNFQNMPAAHAGIATTLTVRNYPSGH      480
481      MIYLDNASRTAMKADLSDFYAGSDRHVEAIQAALPVQEQQAAYAARYRRRLSRTPY          536

>MER0123434 - family S53 unassigned peptidases [S53.UPW] peptidase unit: 51-548 ( active site residue(s): 261,265,349,466  ) (Cupriavidus necator) (Source: MEROPS) 
1        MADTHVQLAGSRRPLPHNAIRVRDVDPHAIVDVTVTLKGPDLPAPEQMPDKALSREEIVQ       60
61       RFGVPAETVRKVEDVLRGYGLQVVEVKQGGRSIRVRGTASAMIAAFKPELGIYHVPGQGQ      120
121      IRARHGVLMVPGEIADVVEGVFGLDQRQMAKRHAQAAALVRTLVPLTPADLVKRYHFPDG      180
181      DGADRTIAIAEFGQNIGNGQVLPPAYLPSDVSLFCKRQGLPVPVVRIESVGLSPLSEQQF      240
241      RAEIQELPKDLQDLLFVQTAETMMDIEIVAGLCPKADIGVYFATWGESGWINLLDEVTSG      300
301      KGPVPVALSISYGLAEEATDWSHGAMASINQRLQIAAMQGVTVCVSSGDDGSGCNQPGKR      360
361      CHVAFPTSSPYVLSVGGTMLVTHADGKSEEVAWWEAPGERTQQGGGSTGGGVSVLNPRPP      420
421      WQNVSVASLNPGAANGRVVPDVAALAGPPLYDLLLDGHALPDGGTSAAAPLWAALVARID      480
481      AALPAGKRQRFLAPLLYKGDVGRAGFSDVVSGQNTSRPSPGKGYTAKAGFDAVTGWGVPN      540
541      GQGLLAALAAV                                                       551

>MER0052905 - family S15 non-peptidase homologues [S15.UNW] peptidase unit: 86-519 ( active site residue(s): 138,266,298  ) (Cupriavidus necator) (Source: MEROPS) 
1        MQIDWDVEILMDDGLLVRADVFRPEEEGRYPVLMSYGPYAKGLPFQAGFPTQWQSLTEKH       60
61       PEVLRGSSGKYANWETADPERWVPLGYICIRVDSRGAGRSPGVIDSFSPREAQDFHDCIE      120
121      WAARQPWSNGKIGLAGVSYYAASQWIVAGTRPPHLAAICPFEGFSDFYRDVVRHGGILNT      180
181      FMTEWYPMQVTNVQHGLGSRGHVNPNNGVPISGPAELSDEQLIANRVDIDAMQVGSELIS      240
241      ADYFDGRRADLAAVEVPVLSCGNWGGQGLHMRGNIEGYLHAGSKQKWLEMHGLEHWTEFY      300
301      TDYGVALQRRFFDHFLKGEDNGWDREPPIKLQVRHTDKFVERAEFEWPLARTAWTRMYLN      360
361      ADTLALQPEPGKATSLQSFDGLTGNASFSTAPFEHDTEMTGPLAATLYISSTATDADLFL      420
421      TVRAFAPDGKEHLVLGSVEPHAPITQGWLRASHRKLDRQASTPYQPVHTHDELRPLVPGD      480
481      VYEVHVEIWPTCFVFPRGYRLVLTVGSSDFQHDLPGPHPRLYGKELRGCSVMLHDHPADR      540
541      SQERFGGVTSLHCGGEYAAHILLPVIPAT                                     569

>MER0094576 - cephalosporin C acylase precursor [S45.003] peptidase unit: 255-636 ( active site residue(s): 255  ) (Cupriavidus necator) (Source: MEROPS) 
1        MRWFRRLAWLVIVLLLVSAAALAGGYIWYRQASQPQTAGTLSLQGLQGRVTIVRDRNAVP       60
61       HIRAASRLDGYYAMGFVHAQDRLWQMQMNKRIVAGRLAEILGPKALDTDKFLRTLGVRRN      120
121      AEAIYAQLEPDTRAALQAYAAGVNAYIDQRKGPLPPEFLLLQTRPEHWEPADTLGWQTMM      180
181      AWDLGGNWTQETLRMALSQVLPTARISELLAPYPGERPVRTLDYGTLYRHLAPLASALAR      240
241      VGDMAPPSYVEGMGSNNWVVSGAHTQSGKPMLANDPHLGLQAPALWYFAHLQAPGLDVAG      300
301      ATLPGAPLVVLGHNARIAWGFTNTAPDVQDLYLERLQPGSTDNYQTPDGWAAFVTRAETI      360
361      HVKGAADVALTVRETRHGPVISDVSEPVANAASPLGARYVVAFQWTALRADDRTFQAGLK      420
421      LNVATDWASFTQALRDFHSPQQNMVYADVDGNIGFIAPGRIPLRRADNDLKGLTPAPGWD      480
481      ARYDWNGFIPFEHLPRAYNPPNGIIVTANQRIVGTDYPYFITSEWTVPYRYQRIRSLLDA      540
541      TPRHTFESFGAIQKDVVSLAVRDILPLLLASPVASDKSRPGRERELFDALRKWDGTMDAT      600
601      SAEPLVVSAWLRELSRRLFEDKVGEPLFQRMWEQRNVHQPMLNILRNPAGPGSLGSFWCD      660
661      KLGTTEHESCAAAVADAWTLAIADLSQRYGDNAGKWRWGKAHAARSEHKPFGKQPYLSGF      720
721      FNLRVPTGGDTYTVNVGRNNLRDEQAPFESTHAASLRALYDLSDLDASRFMDSTGQSGNP      780
781      VSPNYRDWTGKWAAVEYITMAGKQEPVREPFDTLVLEPAKVREGAVRGK                 829

>MER0079794 - murein tetrapeptidase LD-carboxypeptidase ({Escherichia}-type) [S66.002] peptidase unit: 10-314 ( active site residue(s): 113,212,282  ) (Cupriavidus necator) (Source: MEROPS) 
1        MSTPSPKPHTEVRLIASSGYPHDVAIAARGCAWLKSHGYHTTNPDVLARRYLRFGGTDAE       60
61       RLSDLHAIGTGAPHELTLAVRGGYGIARLLDRLDFAQIAEQARATATPIVGHSDFTAFQL      120
121      AYLAATGGVTFAGPMLLADFGADTVDPFMWEHFEGVLRDPAYTVTVLAPQDDGQPFSGTV      180
181      TGTLWGGNLAMLCSLLGTPFMPRVEGGILFLEDINEPPYRVERMLLQLFQAGVLGTQRAI      240
241      ILGDFSNYRVTDYDNGYDMDAVVAYLRDQLHVPVLTGLPFGHCARKLTLPVGGHAQLTAS      300
301      AEGFTLVMSGYPVLPPLA                                                318

>MER0052906 - subfamily M50B unassigned peptidases [M50.UPB] peptidase unit: 9-455 ( active site residue(s): 19 metal ligand(s): 18,22,410 ) (Cupriavidus necator) (Source: MEROPS) 
1        MQTVIAFVVALCVLIFVHEMGHYLAARACGVKVLRFSIGFGRPLLRWISKGRDRTEWTVA       60
61       AIPLGGYVKMLDERERDPQHDAPIDPAELPRAFNRQPVGKRFIIVAAGPLANFALAIVLY      120
121      FGLFTGGMREPAPILATPAAGTMAAEAGVREGDRVLSLQANGREEAVRSWNELRMAVFAE      180
181      GFGDARAVLRVRGSDGSERDLTLARLPSTGSNPEQDPLATLGLSLKGGPVTITEVMAGSA      240
241      GERAGLKAGDRVVAWQGKPLTQASELIKAVRAQPGQRVALGIERNGQRLDIPVTLDTAPP      300
301      RDGEASGAAPAGKLGAALTQAVEMETVRYAPVQALDRAVGQVWNTSALSLKLLGKMLIGQ      360
361      ASLQNLSGPLTVADYAGRAAHLGLQAFVSFLALVSVSLGVLNLLPIPVLDGGHLLYYCVE      420
421      FLTGRPVPDHWQAMLQKVGIACILLLTSLALFNDVSRMFLANG                       463

>MER0054806 - family M55 unassigned peptidases [M55.UPW] peptidase unit: 1-272 ( active site residue(s): 115 metal ligand(s): 8,10,60,104,134 ) (Cupriavidus necator) (Source: MEROPS) 
1        MKLLISTDIEGIAGVFHAEQTRPGNGEYERARAWMTGEANAAVQGAFDAGATAVLVNDSH       60
61       GGFRNLLPDQIDSRAQLVLGKPRYLGMMAGVETGCDGVFLIGYHCRAQSRGVLAHTINSS      120
121      AFARVWLNEQELGEAGLYAALAGEFGVPVLMASGDDVFIGESRPLMPWVRYVQTKSAGGF      180
181      GSGSTLAPAAARDAVRKAASQAVRDRADATPFRIDGPVTCRLQTQTAAHADLFCQWPTLE      240
241      RVDGVTLSFSADSVQSAVRMLNCLSAMSFMLK                                  272

>MER0052909 - low osmolarity induced peptidase [M48.022] peptidase unit: 77-250 ( active site residue(s): 131 metal ligand(s): 130,134,190 ) (Cupriavidus necator) (Source: MEROPS) 
1        MKATLLIALAAAAAATLAGCAGTNLDGMMAAGSSLAKAATLSDADVKSLSDQACAESDKT       60
61       NKIAASGSTYSRRLAKVMTGLKNSDMPNVNARVYMTKDVNAWAMANGCVRVYSGLMDMMT      120
121      DDEVRGVLGHEMGHVALGHTKKAMQVAYTATAARGVAASASSSAVAALSSSQLGELGEKL      180
181      INAQFSQSQESAADDYSFDLLTKNKASTSGLVTAFQKLAKLDGGKSSMFSSHPGSDARAQ      240
241      HIQERINKGA                                                        250

>MER0052910 - repressor LexA [S24.001] peptidase unit: 102-218 ( active site residue(s): 136,173  ) (Cupriavidus necator) (Source: UniProt Q46ZR1) 
1        MATLTPRQQQIFDLIRNTIRNTGFPPTRAEIAAEFGFSSPNAAEEHLRALARKGVIELTP       60
61       GASRGIRLKVARSDSEMPDQFSLPVSGIMQLTLPLVGRVAAGSPILAAEHIDRQYQVDAS      120
121      VFDERPDYLLRVRGLSMRDAGILDGDLLAVRKASEAPNGKIVVARLGDDVTVKRLQRRDG      180
181      AIELIAENPDFPNIMVTPGREEFSLEGIAVGLIRSSGF                            218

>MER0052911 - subfamily M23B non-peptidase homologues [M23.UNB] peptidase unit: 190-284 ( active site residue(s): 266 metal ligand(s): 192,268 ) (Cupriavidus necator) (Source: MEROPS) 
1        MHKIVNSQQFARAGQLVAASTLVALLAACANSPMPAPVVDRTSTAGTAPAAPLEPAPPGY       60
61       YRVKRGDTLYRIALENGQSYRDVAGWNNISNANQIEVGQLLRVVPPGADVNAGQGVTTTP      120
121      VAPGAIQSQPIDQARPAGTPVPPPAATTAPAAGAAASAGTSGPVADTAMKLAWPATGQLV      180
181      GKFDDKSNKGIDIAGKKGDAVLAADDGRVIHVGPLRGYGNLVIIKHNETFLTAYGHNDKV      240
241      LVAEQSTVRKGQKIAEMGNSDTDRVKLHFEVRKNGKPVDPMRYLPPQ                   287

>MER0054277 - signal peptidase I [S26.001] peptidase unit: 91-299 ( active site residue(s): 104,159  ) (Cupriavidus necator) (Source: MEROPS) 
1        MNFALILFVLVVITGIAWVADKLVFERQRRASARLALAEFDSRQSDLQGRFGSGEVDSTR       60
61       KRLAEEKLRQPWWLEYSASFFPVILAVFVLRSFVVEPFKIPSGSMIPTLLIGDFILVNKY      120
121      DYGIRLPVVNKKIVDVGEPQRGDVMVFRYPKDPSLDYIKRVIGVPGDVVQYSNKHLTING      180
181      KPADYTPLPDYLDEERLAYSKHFREKLPGGVEHGILNDVDRPAFVAGADPDFPFRENCTY      240
241      NQQGVTCKVPAGHYFVMGDNRDNSLDSRYWGFVPDENIVGKAFVIWMNLGNFGRVGSFK       299

>MER0054808 - subfamily S1C unassigned peptidases [S01.UPC] peptidase unit: 109-465 ( active site residue(s): 131,161,232  ) (Cupriavidus necator) (Source: MEROPS) 
1        MTFRSPALARAVVMAAILILGPAVAEVGHAQAAASNYNLPDFTDLVEKASPAVVNIRTTE       60
61       RIRSRGGSGGDDDEMAEFFRRFFGVPMPGAPTPGAPNAPRRGQPPQGEEQSRGVGSGFII      120
121      SQDGYVMTNAHVVADAETIYVTLPDKREFKAKLIGSDKRTDVALIKIEATGLPKLVLGDS      180
181      DKVRAGEWVLAIGSPFGLDNSVTAGIVSAKGRDTGDYLPFIQTDVAVNPGNSGGPLINLR      240
241      GEVIGINSQIYSRSGGYMGISFAIPIDEAMRVTEQLKTSGRVTRGRIAVAIGDVTKEVAD      300
301      SLGLGRARGALVGSVEPGGPAEKAGIEPGDIILKFNGREIEKASDLPRMVGDTKPGTRVP      360
361      IQLWRKGATRDVSITVTELEPEARAKARNAPSSKDDASAQAPKPNALGLIVNDIPDARLK      420
421      ELKVRSGVEVEVADGPAMRAGIRPGDIILRLGDTDVTGARQFNDLVKGLDKSRIAAVFVR      480
481      RGDATQVLTLRPGATAAR                                                498

>MER0052912 - family S24 unassigned peptidases [S24.UPW] peptidase unit: 286-421 ( active site residue(s): 337,374  ) (Cupriavidus necator) (Source: MEROPS) 
1        MEIKDIRRNNLLALLSGFASIRAFADRTGVPAAYISQIKNEAGGRGMGNKTARTIEEALS       60
61       LPNGYMDQAHAEAGVVVHKPPSPATTGRPAAVVGTIEKWQIEDANRLKQLFESKAPYGQD      120
121      EFGRRFEIGTQGMVWQYLNARRALNINAASAFARGLGIAVDDFSPRLAEEIRLAESHIAD      180
181      AIPPLPQGAEAGVRPSDRIALVMAEQHLDVQQLAQLLAVEPAVVRAWLEPDSPKLGLLHA      240
241      VRLQDAYGYSPKWLINGQGEPKLGGAIEPELDEPSLAFDVFPIPQNSFRKIPVRGMAQLG      300
301      DNGHFVDIEYPVGHGDGYVFFPTKDPDAYALRCNGESMRPRVKHNEFVVVEPNTQIQNGD      360
361      EVLAKSQDGRVMVKELAYIRDGIVHLSSVNERHGMVRIPQDQIERLHFVAGIVKRSAWQP      420
421      D                                                                 421

>MER0054809 - alanyl aminopeptidase (bacterial-type) [M01.005] peptidase unit: 215-429 ( active site residue(s): 302,389 metal ligand(s): 301,305,324 ) (Cupriavidus necator) (Source: MEROPS) 
1        MLRTDTPVTVYRKDYTPPAFTIDHVELVLDLDPQRTVVTSTLRFARHASAAADAPLVLVG       60
61       EDLELVGVSVDGKPVANARQEAGTLTLPGLPAQGTLEITAACQPAANTSLSGLYVSNGNF      120
121      FTQCEAEGFRRITYFLDRPDVMATYRVTLRADRAACPVLLSNGNLVSESELPGGRHEAVW      180
181      EDPFRKPSYLFALVAGKLECIEERIQSASGKDKLLQVWVEARDLDKTRYAMDSLIHAIRW      240
241      DERRFGLELDLDRFMIVAVSDFNMGAMENKGLNIFNTKYVLANAQTATDVDFANIEAVVG      300
301      HEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSADMMGSESGRAVKRIEDVRVLRQVQ      360
361      FPEDAGPMAHPVRPDSYEEINNFYTVTVYEKGAEVVRMYQTLLGRDGFRKGMDLYFKRHD      420
421      GQAVACDDFRAAMADANGRDLTQFGLWYSQAGTPVVTARTAWNADDGSLTLTLSQRCPKV      480
481      GIETRAGTPEKQPFHIPFAIGLLGADGHDLPLQLEGEAAADGTTRVLDFTQAEQTFRFVN      540
541      LPRGTAAPLPSLLRNFSAPVIVDAEYTDAQLTFLLAHDSDAFNRWEAGQRLATRALLQLV      600
601      ADVQAGRDLKLDHALISAMRTVLNDDRLSPAFREQALVLPAEAYLAERMGVADPAAIHQA      660
661      RQFMRAGLAHALQADWLAAYESNATPGAYSPDADSASRRALRNLALGYLVESGSDAMLQL      720
721      AGEQYQKADNMTDRFAALSALVNSFAPGREAALADFYERFEDDALVIDKWFSLQGMQRGE      780
781      VGPHAGKRTIDTVRALMEHPAFNLRNPNRARSLIFSFCSGNPAQFHAADGSGYRFWADQV      840
841      LALDAINPQVAARLARVMDRWQKYEPALRDRMRAELERVSASASLSRDVREIIGKALAA       899

>MER0052913 - subfamily A24A unassigned peptidases [A24.UPA] peptidase unit: 26-128 ( active site residue(s): 38,97  ) (Cupriavidus necator) (Source: MEROPS) 
1        MNLLPPKLPAPRAMSSATFATFIGPITIAIVSTAAAIDLDRRRIPNWLTLGSWIAALPMQ       60
61       VAIHGIAAGSLAWLYGWIAGLIIFLPFYLLRGMAAGDVKLMAAVGAWLGASMVPSIAVAT      120
121      WLIGGAWALAMLLVTGQTGATLSRVGNMLLSAAIHRGHGLAKSGSKSSAGSIPYGVAIAG      180
181      GTLAMLFFGT                                                        190

>MER0079795 - PepA aminopeptidase [M17.003] peptidase unit: 23-510 ( active site residue(s): 294,368 metal ligand(s): 282,287,305,364,366 ) (Cupriavidus necator) (Source: UniProt Q46XT9) 
1        MEFSTKALDWSKAGQNGFLATKTDCLVVGVFEGQNLAGVAKALDVATKGLVARLLKQGDF       60
61       EGKRGTQLTLHEVAGVGAARVLLVGLGKEADFNDKAFAEAVRTAVRALSSTRATSALWCL      120
121      SQQPPQQRDIGWAVITTISLVRDAGYRLLERHPGLKRANGKPGAADKATLRKVVLAVDAN      180
181      DAKAATQAVVRGTAIANGMELTRDLGNLPSNICTPTYLANTARAIAKRHKLKVEVLGRKQ      240
241      IEALNMGSFLAVTKGSVEPPQFIVLRYDGAGAKQAPVVLVGKGITFDTGGISLKPGEGMD      300
301      EMKYDMCGAASVLGTLQAVAEMGLKLNVIAVVPTCENMPSGVATKPGDVVTSMSGQTIEI      360
361      LNTDAEGRLILCDALTYVERFKPAAVVDVATLTGACIIALGHINTGLYARSDMLADQLLQ      420
421      AGRKSMDTAWRMPLDDEYQDQLKSNFADMANIGGRPAGSVTAACFLARFTEKYDWAHLDI      480
481      AGTAWKSGAAKGATGRPVPLLTQFLMDRAA                                    510

>MER0052914 - low osmolarity induced peptidase [M48.022] peptidase unit: 78-250 ( active site residue(s): 131 metal ligand(s): 130,134,190 ) (Cupriavidus necator) (Source: MEROPS) 
1        MTRYARYAVPALACIALQAGCANMNMDSMTQAGGSLFSAASLSDANVKTLSDQSCAEMDK       60
61       KNTIAAADSTYTKRLANVMSGLGNTGLPLDAKVYMTKDVNAWAMANGCVRVYSGLMDLMT      120
121      DDEVRGVVGHEIGHVALGHTKAAMQVAYGTSAARGALGALGNPTLTALTSSQIADLGEQF      180
181      INAQFSQRQESAADDYSFDLLTKNGANRQALASAFRKLASLDGGQSSMLSSHPGSLERAK      240
241      HIDARLAGGK                                                        250

>MER0052915 - family A8 unassigned peptidases [A08.UPW] peptidase unit: 18-176 ( active site residue(s): 128,155  ) (Cupriavidus necator) (Source: UniProt Q46XM6) 
1        MASTTSRSARPARRNNKASGNTTPLLWMAFALLVVVLDQFFKIVIVRTFTYGESRPVTRF       60
61       FNLVLVYNKGAAFSFLADAGGWQRWFFTGLGLVVGAFIVWLLYRHTGQKLFCFAVSLILG      120
121      GAVGNVVDRVVYGHVIDFLDFYVRNYHWPAFNVADCAITVGAVLLIVDELRRVRKH          176

>MER0054810 - type 4 prepilin peptidase 1 [A24.001] peptidase unit: 59-291 ( active site residue(s): 158,222  ) (Cupriavidus necator) (Source: MEROPS) 
1        MNPAFPAGGAFALPALAALPPSFLVAAAAVLGLLVGSFLNVVIHRLPRMMEHDEANYIAE       60
61       VRSDPLPYPDRYNLMVPRSACPHCGHAIAAWENIPVISYLFLRGRCSSCKAPIGMRYPLV      120
121      ELATGVLSALAAWHFGATWQGVAALVLLWALMALTMIDADTQLLPDQITLPLVWLGLLLN      180
181      LAGLFVPIADAVIGAVAGYLLLWSAYWLFKLVRGKEGMGYGDFKLMAALGAWFGWQALPS      240
241      LVLLSSVVGVVFGVANIALRRQGRDTPFPFGPFIAGAGGLVLFFGPGVLPLLFMP           295

>MER0052916 - family M20D unassigned peptidases [M20.UPD] peptidase unit: 1-394 ( active site residue(s): 78,135 metal ligand(s): 76,104,136,368 ) (Cupriavidus necator) (Source: MEROPS) 
1        MKLIPEILQAQADIRTIRRDIHAHPELCFQEQRTADVVASNLESWGIEVHRGLGKTGLVG       60
61       VIRQGNSARSIGLRADMDALPLQEANTFGHRSQHDGRMHACGHDGHTAMLLGAARYLAEH      120
121      RNFDGTINLIFQPAEEGGGGAREMIKDGLFERFPCDAVFGMHNWPGMPVGAFGTRAGPLM      180
181      ASSNEFRIVVRGKGAHAAMPNNGSDPVFTAAQIVSALQGIITRNKRPIDTAVISVTQFHA      240
241      GDATNIVPDQAWIGGTVRTFTVPVLDLIERRMEEVARAVASAFDCTVDYEFHRNYPPTIN      300
301      SAAEAEFAAGVAAELVGLDNVNADVEPTMGAEDFSFMLQEKPGCYLFIGNGDGAHRESGH      360
361      GMGPCMLHNPSYDFNDELLPVGSTFFVKLVEKWLPRA                             397

>MER0054811 - BcepAP aminopeptidase ({Burkholderia cepacia}) [M61.002] peptidase unit: 5-612 ( active site residue(s): 303 metal ligand(s): 302,306,336 ) (Cupriavidus necator) (Source: MEROPS) 
1        MTNDTIMPMTPIRYAIAPLQPEAHLFAVTVTVTSPDPAGQRFFLPAWIPGSYMIRDFARH       60
61       IVRIRADAGGKAVALTKLDKQSWQAAPVDVSAGPLTLSYEVYAWDLSVRAAHLDTTHGFF      120
121      NGSSVFLCVDGQEDQPCTVDIHAPAGETYRNWRVATAMREASGREGAKRYGFGRYQVADY      180
181      DELVDHPVEMGDFLMATFRACGAQHDVVFTGRVPQLDIDRVCRDLKRICEAQIRLFEPRS      240
241      ARAPFLDSNRRYVFMTMVTTDGYGGLEHRASTALMCARSDLPVLGDSETSEGYRTFLGLC      300
301      SHEYFHTWNVKRIKPAAFVPYRLQEETYTPLLWLFEGFTSYYDDLVLVRSGCVTDTQYVE      360
361      MLAKTWNGVLRGNGRTKQSVAESSFDAWTKYYRQDENAPNAIVSYYTKGSLVALALDLTI      420
421      RDKTAGRRSLDDVMRALWQRYGRDFYAPDAVQRGVTEAEVHALFDEITGLRLGALLRSLT      480
481      EGTGELPLAPLFKRFGVKAEAQKPARTAALGIKTKTDDGWVRVTQVLDGGAAQAGGISAG      540
541      DLLAAVDGLRVAPGQLDKLLGRYRAGDPVTLHVFRRDELQVLPITLAREPAAQFKLTLES      600
601      GKHASRTRWLGR                                                      612

>MER0054813 - family M20D unassigned peptidases [M20.UPD] peptidase unit: 10-403 ( active site residue(s): 91,148 metal ligand(s): 89,117,149,375 ) (Cupriavidus necator) (Source: MEROPS) 
1        MTRAPTLKPFQYLPHLLPNISIDAETFVGIRRQIHSHPELGFEVGATSKLVATLLSEWGY       60
61       EVHTGIGKSGVVGQLKRGTGKRRLGIRADMDALPVIEATGLPYASQLHGKMHACGHDGHT      120
121      AILLAAAKAIADHPDFDGTLNLIFQPDEENLCGARAMIEDGLFERFPCDAVFALHNMPGV      180
181      PAGTFRVLPGPVSLSSDVADVTIKGVGGHGAMPHRARDPIAASAAIVTALQTVVARNVAP      240
241      DDTAVVSVGFIRGGATHNVIPESVTIGLNVRAGRPETRAMVEQRIREIVSLTAQAHGVEA      300
301      QIDYRQLTPPMVNAEAETQLAQRVCAELVGAENVVTQAPKGLNGSEDFAWMLNQVPGCYL      360
361      ILGNGEGEFGGCMVHNPGYDFNDAVLPLGAAAWVRLTQAYLAAQ                      404

>MER0054814 - HtpX peptidase [M48.002] peptidase unit: 84-292 ( active site residue(s): 145 metal ligand(s): 144,148,224 ) (Cupriavidus necator) (Source: MEROPS) 
1        MKRVLLFLATNLAVMLVLSITASVLGVNRFLTANGLNFGMLLAFAALMGFGGAFISLLMS       60
61       KTIAKWSTSAQVITHPSTSTELWLVQTVQKLSQKAGLPMPEVAIYEGEPNAFATGATKNS      120
121      SLVAVSTGLLQSMSHDEVEAVLAHEVAHIANGDMVTLTLIQGVVNTFVIFLARVVGYFVD      180
181      SMLRKNDEESSGPGIGYMVTVIVCEIVFGVLASIIVAAFSRRREFRADAGAASLMGSSTP      240
241      MVGALRRLGGLDADGLPQNMQAMGIAGGKSWMELFSSHPPIEQRIAALQSAR              292

>MER0054815 - subfamily M48B unassigned peptidases [M48.UPB] peptidase unit: 90-304 ( active site residue(s): 152 metal ligand(s): 151,155,222 ) (Cupriavidus necator) (Source: MEROPS) 
1        MFSAPRCDGGAGYDYSEITSMFNWVKTFMLMAAITALFIVIGGMIGGRNGMMFALLMALG       60
61       MNFFSYWFSDKMVLRMYNAQEVDAGSAPQFYGMVQELAQRAGLPMPRVYLINEDAPNAFA      120
121      TGRNPEHAAVAATTGILRVLSERELRGVMAHELAHVRHRDILTSTIAATMAGAISALANM      180
181      AMFFGGRDENGNRTNPIASIAVAILAPLAASLIQMAISRAREFEADRGGAEISGDPQALA      240
241      SALDKIHRYAQGIPFQAAEEHPATAQMMIMNPLSGGGIANLFSTHPATEERIARLMQMAQ      300
301      TGTYPA                                                            306

>MER0052931 - family M41 unassigned peptidases [M41.UPW] peptidase unit: 382-646 ( active site residue(s): 435 metal ligand(s): 434,438,511 ) (Cupriavidus necator) (Source: EMBL nucleotide CP000092) 
1        MEPRQQQFSLWYLLLTVSAMLILQSVLFSSHVETLPYSDFKVLLKAGKLKELTLGEGVIT       60
61       GTVNTDGIENLLPKPQVEEMQRQGKGDHPFSTLRVNDPNLVQELESAKVRFVGQADNKWI      120
121      GTLLSWVVPAMLFFVVWSFLIKRMGGAAGGMLEIGKSKAKVYMQKETGVTFADVAGIDEA      180
181      KEELAEIVNFLKDPQRYRRLGGKIPKGVLLLGAPGTGKTLLAKAVAGEAGVPFFSMSGSE      240
241      FVEMFVGVGAARVRDLFNQAETKAPCIIFIDELDALGKTRALGAVTGNDEREQTLNQLLV      300
301      EMDGFDTNKGVIIMAATNRPEILDPALLRPGRFDRHIALDRPDLKGREQILKVHIKNVVL      360
361      APTVELKKLAARTPGFAGADLANLVNEAALLAARKGKDAVEMADFDDALDRIIGGLEKKN      420
421      RVMNQQEKETIAYHEAGHAIVAELRPRADRVSKVSIIPRGVAALGYTQQTPTEDRYLLKQ      480
481      SELLDRLDVLLGGRIAEQIIFGDVSTGAQNDLQRATDMARQMITQFGMSEQLGLATYEEM      540
541      PNPLFMGAGMMPRDRKEYSENTAQLIDAEVRQLLTDASKRVKQTLMENRHRLDALAKLLL      600
601      EQEVVERPALDLLLSDKVTPLIPGRPVTDVASTSGSQKRSHENDSK                    646

>MER0052932 - subfamily M23B unassigned peptidases [M23.UPB] peptidase unit: 323-460 ( active site residue(s): 434 metal ligand(s): 354,358,436 ) (Cupriavidus necator) (Source: EMBL nucleotide CP000092) 
1        MSKIEEGRGSWQNVQLEAQAANEESHPHYERDVAGLRGRFLPKPVTYGDPDHSRHWQYRT       60
61       QLVASVAAALMLCMAAAMAMTPHSAYDDPQAPRLQISLGQPKLHDQLASLTEVPATYIRE      120
121      EPMQRGDTIASLLKRLGVDDPDAQQFIRGNAVARNLFYLEPGQVVRVEADQDNLLVSLHA      180
181      TLGGNVSASKEMVIGRAGDDPDEPAYKAEVHTVKNELRYEMRSGIVAAKGFFTTMDAANV      240
241      PDEIVRQMVSIFSGVIDFQHDIFAGDRFRIVYEAGFRDGTLVRNGRVVAVELINRSQIYQ      300
301      ALWYAVDGSNAGDYYTFDGRSMKRPFLRSPVEFSRMSSGFGWRNHPLHHQWVQHKGVDFA      360
361      APTGTRVFATASGTVDFVGQQTGYGNIVTLRHPGGFSTYYAHLSGYADIRPGQSITQGQL      420
421      IGYVGQTGWATGPHLHYEFRFNDVPQDPLSAILMEPVTLSGRVRERFLNFTSDMLSRINV      480
481      LRTYSVAANDN                                                       491

>MER0052933 - subfamily S8A unassigned peptidases [S08.UPA] peptidase unit: 260-543 ( active site residue(s): 280,310,411,494  ) (Cupriavidus necator) (Source: EMBL nucleotide CP000092) 
1        MADKNILIGYGETLVSPVKLAKGGGDKRYPYEFSTARARLSKKIQNVVEEVKSADPATTP       60
61       HGEAVVEMTLHPAFLAKSYFPQQLLSEFSLRHVGSKGRYLHPEKSLRKVVPEEGEAAPVL      120
121      FIAGSKDNFEALNEGLSRQGLSKVFQDDYRKIEDFQIFSPNHKIKWISEGSDELELEVVL      180
181      HAGTHQKYILDGFMAWAQECGAEVYVEKAIYVPMLTFVPVRVSRGSLGKLAQFSFIRAIR      240
241      SIAPLRVHRPVTIRDSKIDADVRLPSEPALNDEVAVAIFDGGIGHADLNPWVDEYTWEDT      300
301      KSTTAKLLMHGNAVTSTVLFGESSNVKAVLPRPYSRVRHYRVIGKQDGGDPDLFDVLHKI      360
361      DWVLRNDQPEFVNFSLGPCIPIDDDDVHVWTTLLDHRLSNGRTFATVAVGNDGDDTDPMM      420
421      SRVQPPSDMVNAIGVGAADSQGVQWSRASYSCIGPGRSPGLMKPDGVAFGGSESEPFHVY      480
481      SPGAGAIIGLEGTSFAAPLVLRAAIGVAASLEAPLSATALKALMVHGAEAHGTVGGREIG      540
541      WGRFETNPDNLIVCKDNEAMVIYQGVINPGQPVRARIPFPDMKLNGKVTIRATFAFSAPT      600
601      DPAHSLNYTKAGLNVIFRPNGGEKKSVSFFNQDNFDSEGDLRRDAQKWEACLSRTRRFNP      660
661      TTLNEPVFDVEYLTRDEGKAMRAKDQQPLPYVLVVTVSVDKTPGVYNNVLQKYKSLQPVK      720
721      LATQVQIQT                                                         729

>MER0228812 - family M90 unassigned peptidases [M90.UPW] peptidase unit: 17-280 ( active site residue(s): 168 metal ligand(s): 167,171,245 ) (Cupriavidus necator) (Source: EMBL nucleotide AM260479) 
1        MLGKLTSFLRTRSRARKLEHYAIPDALWARTVATLPFVQRYGSEDLAALRELATLFIADK       60
61       EYSTAHDLPLADDMVASVAVQACVPILKLGLPWYRGWHGIVLYPGEFIIRRTVQDEIGLV      120
121      HGVVEEASGEAWEHGPVILSWPDVHTPGAGIDSDHELPADTYNVVIHEFAHKLDMLDGEP      180
181      DGVPPFSRVLHPDIDAEAWAETFLTEYDRFAESWEARDEADWEHPERLPPALRIIDPYGT      240
241      EAPSEFFAVTSEAFFVEPTGLARHWPVVYQSLAAFYRQDPASM                       283

>MER0054804 - peptidase Clp (type 1) [S14.001] peptidase unit: 10-215 ( active site residue(s): 120,145,194  ) (Cupriavidus necator) (Source: UniProt Q472D3) 
1        MTRNDLLDRLATTQASALETQGLGLVPMVVEQSGRGERAYDIYSRLLKERVVFLVGEVND       60
61       QTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGLAIYDTMQFVKPDVQTLCMGMAAS      120
121      MGAFLLAAGAKGKRSALPNSRIMIHQPLGGARGQASDIEIQAREILYLRERLNSILSEVT      180
181      GQPVEKIARDTDRDNFMSGDQAVDYGLIDKVIARRS                              216

>MER0871859 - family M38 non-peptidase homologues [M38.UNW] peptidase unit: 27-73 ( metal ligand(s): 71,73 ) (Cupriavidus necator) (Source: EMBL nucleotide CP002878) 
1        MSDPTSAHATHYDLLIAGGTVIDGSKAPRFSADIGVRDGCIAAIGDLGGHTADRVLDATG       60
61       LIVAPGFIDAHTHDDQAVLSQPNMPFKVSQGVTTVIAGNCGISAAPLRADMDLPMPLSLI      120
121      DTPEQGRFTTFAAYLDALRTMPSSVNVAAMVGHSTLRAVTMAALDRPADAKEIAAMQALV      180
181      EEAMQAGAIGLSTGTFYPPAAMATTEEIIEVCRPLSARKALYVTHMRDESDHVMASLDET      240
241      FRIGRELDVPVVVSHHKVQRQANFGMSQVTLPFIREAMKHQCVSLDCYPYTAGSTMIRTD      300
301      RGMLDGRVLIAASQPHPECAGRDLDDIAREWGVPKEEAARRLQPGTAIYFQMDEDDVQRI      360
361      LAFDETMIGSDGIPVGTSPHPRLWGTFPRVLGHYCREVGLFPLETAVWKMTGLTARNFGL      420
421      HRRGTLSVGHHADIVVFDAANVRDAASYETPTRPAEGIDTVIVNGAITWQHGAHSGSRNG      480
481      QVITRPAGPEAGNAVPA                                                 497

>MER0730361 - family C56 non-peptidase homologues [C56.UNW] peptidase unit: 80-172 ( active site residue(s): 106,133,134  ) (Cupriavidus necator) (Source: EMBL nucleotide CP002878) 
1        MNILMVLTSHDQLGNTGHKTGFWLEEFAAPYYVFKDAGADITLASPKGDQPPIDPKSDDP       60
61       GAQTDATRRFQSDPAAKAALASTLTLDQVKAEDFDAIFYPGGHGPLWDLAEDNRSVALIE      120
121      QFDRAGKPVGAVCHAPAVFRHTKSADGEPLVKGKEVTGFTNSEEEAVQLTKVVPFLVEDM      180
181      LKANGGRFTRGEDWASYVVVAGRLVTGQNPASSDAVAEALLKMLK                     225

>MER0998646 - subfamily S9B unassigned peptidases [S09.UPB] peptidase unit: 14-207 ( active site residue(s): 148  ) (Cupriavidus necator) (Source: EMBL nucleotide CP002878) 
1        MELISQHGCYGGVQRFYRHDSAAIGLPMRFSVYLPPQAQGGGKVPVLFYLAGLTCTEETF       60
61       MIKAGAQRFAAEHGLMLVAPDTSPRGAGLPGEADAWDFGVGAGFYVDATEAPWQEYWRME      120
121      SYVADELFGLVTTALPGDAGRVGIFGHSMGGHGALVLAQRHPQRFRSVSAFAPIAAPSRC      180
181      PWGEKAFTGYLGSDRAAWAEYDASELMARQQGAPFPAGILVDQGLDDQFLQSQLHPEAFA      240
241      AACQAVGQPLTLRRHSGYDHGYYFITTFIADHIRHHAGQL                          280

>MER0716971 - family C39 non-peptidase homologues [C39.UNW] peptidase unit: 51-186 ( active site residue(s): 54,60,144,162  ) (Cupriavidus necator) (Source: EMBL nucleotide CP002878) 
1        MLQRLLRALPFVLALGGTPPALADRISIYGPVGEYYSVPVTSLREARFKTTIRQQYDFSC       60
61       GSAAVATLLTYQYGQPVSEELVFANMFVNGDQAKIRQEGFSLLDMKRYLASQGFLADGYE      120
121      LPLSKLEETKIPAIVLIAENGYHHFVVVKGVRGDRVLIGDPARGTRSISREHFESIWESQ      180
181      LLFVIHNRTEQARFNLAADWRVAPSGPYWMGVNRDSLFFTVMPKHGASDF                230

>MER0693646 - subfamily A24A non-peptidase homologues [A24.UNA] peptidase unit: 4-174 ( active site residue(s): 20,73  ) (Cupriavidus necator) (Source: EMBL nucleotide CP002878) 
1        MIAALLCAATLYTDLAYRRVPNALLAAAVLVLGLALLAGQATELPLAARLTGAGLGLAVT       60
61       LPAYALGRMAAGDVKFLAVVGLFTGPQGLVVAWVVGSLLGLVHALLALALDSSVLAALRQ      120
121      RAAARLRVAASTPATEQALHHQDRPIPTAQFSRARGIPYAAYLAVGVLVWMAAGQ           175

>MER0868877 - family M38 non-peptidase homologues [M38.UNW] peptidase unit: 27-70 ( metal ligand(s): 0,0,65,67 ) (Cupriavidus necator) (Source: EMBL nucleotide CP002878) 
1        MSQSPQILFHGGDVLEPGTGELLRCHDVLVEGERIAAVGPAIDAPSAQRIDARGKTVMPG       60
61       LIDCHVHVLASLANLGLNAVQPNVLVAIRALPIMQRMLERGFTTVRDAGGADWGLSQAVA      120
121      TGLVPGPRIFASGKALSQTGGHGDFRPRSDVLEPCSCAFRAGAIARVVDGVDAVRLAVRE      180
181      EIQKGASQIKIMASGGVASPTDPIGNTQYSEDEIRAIVAEAEAAQTYVMAHAYTGRAITR      240
241      AVRCGVRTIEHGNLVDRAAADEMRKHGAFAVPTLVTYDALARDGARLGLPADSVAKIETV      300
301      RQAGRDSLRIYADAGVPMGYGSDLLGEMHDHQAEEFRIRAELLGNLEAIRSATSIAAAIL      360
361      QREGELGTVRAGALADLLLVDGNPLADIGLIAGQGERLSVVMQAGRIHRREG              412

>MER0863233 - family M38 non-peptidase homologues [M38.UNW] peptidase unit: 54-105 ( metal ligand(s): 0,0,0,96,98 ) (Cupriavidus necator) (Source: EMBL nucleotide CP002878) 
1        MSITRRHFIASAAALGAAASSELFAMSPNPTPDLILVNGKFATLDRANPQADAVAIQDGR       60
61       FVGVGTRQDIMKLAGTQTRVIDLNGRRAIPGLIDSHMHIIRGGLNYNMELRWDGVRSLAD      120
121      AMRMLKDQVARTPAPQWVRVVGGFTEHQFAEKRLPTIDELNAVAPDTPVFILHLYDRAIL      180
181      NGAALRAVGYTKDTPNPPGGEIVRDARGNPTGLLLAKPNATILYATLAKGPKLPPEYQKN      240
241      STRHFMREVNRLGVTGVIDAGGGYQNYPEDYSIIEELHKEGHLTVRLAYNLFTQKPKEEL      300
301      SDFKTWTSTVKPGQGDDLYRHNGAGEMLVYTAADFEDFRVERPDMAPSMEADLEPVIRLL      360
361      AEKRWPWRLHATYDQTITRALDVYEKVAKDIPFNGLNWFFDHAETISDRNIDRIAALGGG      420
421      IAVQHRMAYQGEYFVERYGARAAEATPPVKKMLERGVKVGAGTDATRVASYNPWVSLYWL      480
481      TTGKTVGGMSMYPQANLLDRETALRLWTEANTWFSSEVGKKGQIKVGQLADLAVLSADYY      540
541      SVPGDDIQDITSVLTVLGGKVVYGDSEFGKHSPDIPPAMPDWSPARHGSQYQPRPQAQAR      600
601      ALALNTACGCASSCGVHGHAHANAWTSSVPTSDESTFWGALGCSCWAF                  648

>MER1026436 - family S9 unassigned peptidases [S09.UPW] peptidase unit: 45-306 (Cupriavidus necator) (Source: EMBL nucleotide CP002878) 
1        MLGQPSEGGFRTTSCATKLGEMSVHTVVKFDSDGLRLAGALHLPPDLAAGERRPAIAVLH       60
61       GFGSNKDDGMVQLATRLFSSLGYVVLRFDMRGCGNSEGARGKVLCEDQVSDTRNAVSYLQ      120
121      SLPEVEPAKIAVMGHSFGAAVAVYAAGVDPRIVACISSAGWGDGEVKLRQQHAGSAAWQR      180
181      FEAMVEEGRARLATGQSMQVSRFDIVPIPPEMRSSLPAGSFMEFPFEVVESMLRFRPNAV      240
241      VGNIAPRPLLLLHPADDSVTPTDQSIGLFRNARMPAELHLFSEIDHFIFSDDNRAVLNLV      300
301      TDWLHKFFPARQASLGAA                                                318

>MER1100641 - family T3 unassigned peptidases [T03.UPW] peptidase unit: 21-500 ( active site residue(s): 349  ) (Cupriavidus necator) (Source: EMBL nucleotide CP002878) 
1        MLPFDWTFPYPSQKMPLLAANAVSTSQPLAAQAGLRMLYEGGNAIDSAIASAIALTVVEP       60
61       VMNGIGGDMFALVWHEGQLYGLNSSGRAPARWTLDHFAGHDSMPQVGWDTVTVPGQVAGW      120
121      KALSARFGKLPFARLFAPAIEYAEQGFLVSPQIARQWAAQVPVLAGQPGFAKAFLRDGRA      180
181      PQAGERWRFPEQAATLQRIAESDGASFYTGELAARIVAFAEETGGAIRADDLAAHRAAWV      240
241      QPMAQQFRGYTLHEIPPNGQGIAALIGLGILDRFDVESMGCDSAGFYHVSIEAMKLAFAD      300
301      LHRHVSDPATMQHAPAAFLDPAYLAERAALIDMKRAGTPTAGVPKSGGTVYLSSADAAGS      360
361      MVSYIQSNYRGFGSGVVVPGTGIALHNRGAGFNLKPGHANCVAPGKQPMHTIIPGFVTRN      420
421      GEPVMSFGVMGGSMQAQGHVQMMARLAAFGQNPQAMSDAPRFRVEHGPVVNVEAHLAPDV      480
481      VSTLRGMGHRVEVAPRDSLEFGSAQLIYKAPYGYIAASDSRRDGQAVGF                 529

>MER1059715 - family S51 non-peptidase homologues [S51.UNW] peptidase unit: 157-219 ( active site residue(s): 0,211  ) (Cupriavidus necator) (Source: EMBL nucleotide CP002878) 
1        MESISKFTQRCRMLGYYAVACISVALGVLIPPALAGDKTTASYSYFVTGTKYFETGNPVP       60
61       VQTLPTPQPQAVQPVVIMGGGPDVDGAYRWMIQQAGITKATGGRLVVIRATGTDAYDPYF      120
121      YYSNKKNATDMPAVDGYVGGAYLGLTAAETLVITDTAAANDPFVNAVVGSANALWIAGGD      180
181      QSNYIKFWKGTKLNATIAALMQQNVPVGGTSAGANVLGQFVFSAIEGTVTSTQALSDPYN      240
241      KYMTFDPKGFSGPSFLNATALDDTFVDPHFDSRDRMGRLVTFLSRSIAPWSGSGCEGGVL      300
301      KNPSAARGIGLDVETALQIQKISGRFIAQRVTNLSTTSPSAVHFLRPLTSPAVCAPGKPL      360
361      TIYGVHVQRLDDETVFDMTNWWNGGSAGIEAYVVDENAGIQSPATIHY                  408

>MER0998834 - subfamily S9B unassigned peptidases [S09.UPB] peptidase unit: 8-116 ( active site residue(s): 109  ) (Cupriavidus necator) (Source: EMBL nucleotide CP002878) 
1        MATHEDLVQIQSEGGTIAGTLISPQTRLPGVLFVHGWGGSQQQYLARARKVAGLGCVCLT       60
61       FDLTGHAGTQAQYETVSRMRNLADVVAAYDVLVRQPEVDRNAIAVVGSSYGGYLAALLST      120
121      LRQVRWMAFRAPALYMDSGWELPKRQLHREQDLVAYRRSVVPPESNRALRACAEFAGDVL      180
181      VIESEHDQVVPHAAVMSYVDACVHASSMTYRVIKGADHGLTEEESQRAYSSLLVNWLREM      240
241      ITVARAGPVSAERAEPPAPQVPADEPGMPLAESASAPATASGAQ                      284

>MER0731893 - family C56 non-peptidase homologues [C56.UNW] peptidase unit: 104-190 ( active site residue(s): 127,154,155  ) (Cupriavidus necator) (Source: EMBL nucleotide CP002879) 
1        MPASELKIETRSGTKRKPRRILSIVSNTAKLKGVPVGFFAEEMTRAFLMFTEAGHQVDLA       60
61       SPLGGEVMYDTHSDPRAPNGAYANDLVSLGFVHHAKFGALLKNTLPISKVNVDDYDAVWV      120
121      AGGGGPLVTFRDDTALHSLIASFYEKEKVVSLICHGSCLLLWTRLSNGKMLAEGKKWTGF      180
181      SDAEEEVVNARYGMKIHAQTIQGEAANIAGTTFICQGVDEPFAVRDGRLITGQQQYSSGM      240
241      TAALVLDALDEY                                                      252

>MER0731310 - family C56 non-peptidase homologues [C56.UNW] peptidase unit: 63-157 ( active site residue(s): 82,108,109  ) (Cupriavidus necator) (Source: EMBL nucleotide CP002879) 
1        MSTTMTASTRVAMLAYPKFTALDLIGPHQILASLPGVHVDVVGRTTEPVVTDRQICITPA       60
61       KSFSECEADYDIVLVPGGISTHLMVEDAETLEFLARIGENATYVTSVCTGSVILAAAGLL      120
121      KGYHATSHWAYREILADYGAIPSKARFVVDRNRVTGGGVTAGIDFGLQLAAILRGSDVAK      180
181      MIQLVFEYDPKPPFDAGDPERVAPEVLAAAVTRLEPLIAPVREAARRYAARTE             233

>MER0863458 - family M38 non-peptidase homologues [M38.UNW] peptidase unit: 24-68 ( metal ligand(s): 0,0,0,64,66 ) (Cupriavidus necator) (Source: EMBL nucleotide CP002880) 
1        MLKRTLIRNASVITVDPKLGNLDKGDVLVEGSKIAAVGVGLKADDAEIIDGTGTIVMPGM       60
61       VDTHRHVWQTTLRNIAADWTLDQYFAGVRGQLGEHFRGEDIYTANLAGACEALNAGITTV      120
121      LDWSHNMNTPAHTDGAVQGLRDSGGRFVMCYGNSNAEWLPVSNLPTSRDAYRVKKEHFSR      180
181      ADDLVQMGMALRGPQYATEKVTIDDWALARDIGALISVHVGDGAWGKNRPVAWLAEQGLL      240
241      GEDVVCVHCNSLADDEFRIMADHGAWASMTPDIELQMGHGWPATRRLLDVGLAPTLGVDI      300
301      VTSNSGHLFQVMRTVLLVERAWAHHHADQAGEVVQRLPIDTSDVLAFATLNGARALGMAD      360
361      RIGSLTPGKDADIAMIRADNLEMAPLNNPVGAVVLAGHPGLVDSVWVAGKAVKRHGKLVN      420
421      VDVPRLIGELERSRDHVLALAGVAPGERFLPAPYSH                              456

>MER0860605 - family M38 non-peptidase homologues [M38.UNW] peptidase unit: 25-71 ( metal ligand(s): 0,66,68 ) (Cupriavidus necator) (Source: EMBL nucleotide CP002880) 
1        MTFTRKILRGGHIVSMDPNIGELVGDVLIEGDTIAAIGPDLNIADGSAEVIDASRHIVLP       60
61       GFIDSHRHLFQALLRGLASDWSLFQYFVSMFGMLAPTMTPEDMYLGTTLGALDALDAGVT      120
121      GVFDYSHNQSTPEHTDAAIRALRNAGIRAVFGYGGSMAEQAEILVPPFKSATLSNQAEIR      180
181      RIRRQYFSSDSGLLTLGMGARGPDSSTMDVVRADWALARELGIRINIHIGMAALDLGSRP      240
241      NVTRLCKEGLLGDDLIFSHCNLLTDDEFRMMADAGVSATVTPEDECAMGHGWPPIAGLLK      300
301      AGIRPNIGIDTCMAVGGDPFTAMRFALAVPRGLDNQTMLEAHENPWALKLTARDVLEFAT      360
361      IEGARAIGQEATTGSLTPGKQADIVMIRSDHISMIPAIDPIASIVHHASRHTVDHVYVAG      420
421      TAVKRDGKLLGTDMAELNRRAVAASDQILRRAGVQRGWAPKQPQPHHAS                 469

>MER0863289 - family M38 non-peptidase homologues [M38.UNW] peptidase unit: 31-94 ( metal ligand(s): 0,0,75,77 ) (Cupriavidus necator) (Source: EMBL nucleotide CP002880) 
1        MAAPAQAVAHADRILVNGTVLTMDAADGIAQAIAIRGDKIAAVGTNQEVRRLAGQHTEVV       60
61       DLGGRTVIPGLIDTHIHAIRGGQGYGFETYWYEGETTSLAAGLEQLRQTALARGAGKWVV      120
121      VTGSWHPDQFAEKRAPTSAELTALLPDNPAYVQYLYDYAVVNAKAIEVLGLEQADALPAG      180
181      VRAERDGAGRLTGRILGAIRPLSALYARIHAQSNVDTAGNLAAFFGKLNSLGVTAMIDAS      240
241      AGPGANYDPLFALWREQRLPLRVSYRVSAMAAGNESDWLQNTLAYLPPRLGDGKLRFLGP      300
301      GEMLVFGMDDGVTMGPGFRPVAKDRAELLKVASFAASRGYPVEIHAYTDDAASAILDVFE      360
361      EVARSHDLGKLRWAMAHLNTGKPETFRRMKVLGLAYTVQMGPYFEAGAIGHANDNHVAES      420
421      APPVRLALRQGLKVAGGTDATRIGIPGVWRALEFHVSGYAIGKEVRRREEFRLTRLEALR      480
481      LYTANAAWISFDENVRGTLEAGKLADLAVLDKPYLTVPMADIHRIRSVLTLVDGKVVHAD      540
541      GSFASLKAR                                                         549

>MER0858918 - family M38 non-peptidase homologues [M38.UNW] peptidase unit: 20-65 ( metal ligand(s): 0,0,0,62,64 ) (Cupriavidus necator) (Source: EMBL nucleotide CP002880) 
1        MNRTVIKNADILTMDAGLGELRADVLIEGDRIAAIGTDLPVHDAEVIDATGMILMPGMVD       60
61       GHRHVWEIIDMGRLVKSRPAEYAQTYQQWKMRTIVCMTPEDNYLAGLIGGLQAIDSGVTS      120
121      LFDFAHGQPTEACAMGAAQGLKDSGIAGWFGFQLGVSSSYQAGDTVPLAKADGERIAKTT      180
181      EVHWATAERLQRELFSDSSALLQLALAPSGNIGSSLDDIRTEWTRARGMGVGMLAAHIHK      240
241      PEHPLPAGIMGHRDSGIRDLHDAGLLGPDYQATHANRLTAEELAMLRDSGGMLCATAMGE      300
301      FPYVMSASKGPSVHGRSRSAGVPTSMGIDISLALPGDYFEHVRATYWNLYLDPECRALMR      360
361      ACDSEYILDFATAHGAQALRLGDTTGSIQVGKRADLVLLSTERVGFAMAGSLADRVVMFA      420
421      GTADVDSVWIAGKARKRHGKMIGVDWRALKAQLVEAQQRIGRQAATIRFT                470

>MER0866460 - family M38 non-peptidase homologues [M38.UNW] peptidase unit: 74-116 ( metal ligand(s): 0,112,114 ) (Cupriavidus necator) (Source: EMBL nucleotide CP002880) 
1        MGEPLTMTRKSFLRLSGAGIVAAAVGGTAGAQDVLAPRIQGVAPPAMDTPRRTLIRHADV       60
61       LTMDPQFRELHGVDVLIDNGRIAAIGKGLAAADAETIDATGMILMPGMVDGHRHLWQCMD      120
121      AGRLIKMDPSGYSRAYLGWQRRAMACMTPEDNYLAELIGGLQAIDAGVTTVLDFAHGQPS      180
181      EETALAAARGVRDSGVSGWFTYQLGRAVAFGPGSTISMARVHADLNTTTEQSWKTVARLQ      240
241      KEVFSDSSAVLQLGLAPSDATGRPVGEVRKEWERVRASGVKILAAHLHKPATPTAPGTIG      300
301      HRDSGIRDLYEAGLLGSDYHASHGNRVTAAELELLRETGGMLCSTVVGEFPYMLTPHMMA      360
361      SCHGRARHAGVAAGIGIDGPLVVQQDFFEHVRGAFLSLFLEPEGRDLVRAYKSQDSLDFA      420
421      TALGARAVRLGDEIGSVAVGKRADLVLLRTDRIGFAMQGSVADRVANFASLADVDSVWIA      480
481      GKPRKRNGKMLGVNWSRLKTDLAAAQQRLAARMATVNFTA                          520

>MER0896114 - subfamily M50B non-peptidase homologues [M50.UNB] peptidase unit: 10-212 ( active site residue(s): 55 metal ligand(s): 54,58,156 ) (Cupriavidus necator) (Source: EMBL nucleotide CP002877) 
1        MDSSLIQTFAVYALPVLFAITLHEASHGYVAKLFGDDTAYALGRVSLNPIRHIDPIGTIA       60
61       VPLLLYIMTSGQFVFGYAKPVPVAFERLRNPRWHGMWVALAGPASNVVQAFVWVLLAIGL      120
121      TWGGVREPFFGEMALAGVRVNLVVAAFNLFPVPPLDGGRVLTALLPQGIARAVSRIEPYG      180
181      IFVVLALVAAGVITTVWMTPVVNVLMSLIELLLRPIVMLLH                         221

>MER0872523 - family M38 non-peptidase homologues [M38.UNW] peptidase unit: 15-67 ( metal ligand(s): 0,0,0,63,65 ) (Cupriavidus necator) (Source: EMBL nucleotide CP002877) 
1        MSAHDSLDLVIRRADVVTASDRFRCDIGVRNGQIVALGHALPQAAREIDADGLLALPGGV       60
61       DGHCHLDQPMPDGLRMADDFFTGTRAAVCGGTTTVIPFAAQEKGASLKAAVADYHRRAEG      120
121      RAVIDYAFHLIVADPTPAVLADELPTLIRKGYSSFKVYMTYDDLKLSDREMLSVLDVAKQ      180
181      NGALVMVHAENADCISWLTDKLVGEGRIAPRFHGLARPAAVEREATHRAITFAELVDVPI      240
241      LIVHVSGKEAIEQIRWAQGRGLQILAETCPQYLYLTADDMALPGDDGYEGAKCVCSPPPR      300
301      DPENQAAVWRALTNGVFSVFSSDHAPFRYDDPQGKQPGGERPSFEHIPNGVPGIETRLPL      360
361      LFDGVARGKLSLHQFVELTSWRPARLYGLYPRKGTIAIGADADIVLWDPNKRVQIRNSAL      420
421      HHAVDYTPYEGIEVTGWPVHCFSRGEMLVRDGQYQEPQAGRGQFLPAGAPMLG             473

>MER1071964 - subfamily S49C unassigned peptidases [S49.UPC] peptidase unit: 76-230 ( active site residue(s): 120,181  ) (Cupriavidus necator) (Source: EMBL nucleotide CP002877) 
1        MSGRLLAGLAMVCAALAALAGPGARAGPPSGASAPAATVTTTATAPVYVIPLKGAVSPAS       60
61       ASFILRSMERARAGGAQLVVLEMDTPGGLDASMREIIQAILASPVPVASYVYPGGARAAS      120
121      AGTYILYASHIAAMAPGTNLGAATPVQVGIGGPQKPEALPGAKPASAPASEPAGGDTMAR      180
181      KQMHDASAYIRGLAQLRGRNAEWAERAVRESVSLSADEALAQRVVDLVAPDLPALLRQVE      240
241      GRTITAAGGKASVLRTANAPVVTLEPDWRNRFLAVITEPSVALLLMMIGIYGLIFEFSTP      300
301      GMVVPGVAGAICLLVALFALHMLPVNYAGLALVALGIGCMVAELFLPTFGALGVGGIIAF      360
361      AFGAVMLIETDVPGFGVPLPMVAAMSALSAIFVFGMSAMLVRARKRPVVSGAEALVGMRG      420
421      EVLDDLREEGWASVRGETWRVHSASPLPRGTPVVVTARNGLVLEVIAAGNAPLAPPPPSQ      480
481      PTPDKGA                                                           487

>MER0094609 - oxamate amidohydrolase proenzyme ({Klebsiella pneumonia}) [T03.025] peptidase unit: 15-541 ( active site residue(s): 357  ) (Cupriavidus necator) (Source: EMBL nucleotide CP002877) 
1        MQNFNWTNPYPSVRIPLFARNVVSTSHPLAAQAGLRMLLKGGNAVDAAIAAAAAITIVEP       60
61       VSCGLGSDAFAILWDGKELHGLNSSGVAPAAWSPEYFKNKYGTDANGLANRPIRGWDSVT      120
121      VPGVVAGWAALHERFGKLPFADLMEPAIEIAERGYAVPPVVAHKWAAAVPELKDQPGYAE      180
181      TFMPNGRAPAVGEKFTMKAAAETLRKIGATRGRAYYEGEIAEQIAAFSQQCGGAMTLDDL      240
241      RNYRPDWVKPISKSYRGYELHEIPPNGQGIAALIALGILDQFDMSSIPVDSVDSQHLQIE      300
301      AMKLAFADLYRYVADPRSMEVTPEEMLDDAYLKSRAKLIDMQRATHFNFGMPKVGGTIYL      360
361      TAADENGMMISFIQSNYMGFGSGVVVPGTGISLQNRGVGFSMDPKSANVVAGGKRPFHTI      420
421      IPAFLTKDGQPVMSFGVMGGDMQPQGHLQTVVRMLDYNQQPQAACCAPRWKVNRDFTLDV      480
481      ESTMDPATVEGLKARGHQLKSVDDPYMDFGSGQFIWRLSDDAEHGYVAASDSRRDGQAVG      540
541      F                                                                 541

>MER0094522 - DDB_G0276405 ({Dictyostelium discoideum}) [C56.A06] peptidase unit: 29-186 ( active site residue(s): 92,118,119  ) (Cupriavidus necator) (Source: EMBL nucleotide CP002877) 
1        MAKKILMLVGDYAEDYETMVPFQALQMVGHTVHAACPDKQAGDACATAIHDFEGDQTYTE       60
61       KRGHNFTLNATFAGIDPASYDALVIPGGRAPEYLRLNARVLEIVRHFAQADKPIAAVCHG      120
121      AQLLAAAGVLEGKTCSAYPACAPEVKLAGGTYADIPVDQAHTDGNLVTAPAWPAHPAWLA      180
181      QFLAVLGTRIVH                                                      192

>MER1026250 - family S15 non-peptidase homologues [S15.UNW] peptidase unit: 142-257 ( active site residue(s): 0,0,0  ) (Cupriavidus necator) (Source: EMBL nucleotide CP002877) 
1        MTAPTLDITPADALIDAPRRIAITGLRPGETVAVSTRTVRGRDVAWASQADFIAAGDGSV       60
61       DLERDAPVRGSYDGVAPMGLLWAQRPVASDSRELFHTDAIRPLVTEITVTAAGGEARSEL      120
121      VQRLAAPGVVREDIRVDGLVGTLYRPPGAGPHPAVMVLNGSGGGINEPRAALYASHGYAA      180
181      LALGYFKAPGLSDYISNTPLEYFERGLQWMHRELRPAHGFVALSGQSRGGELVLLLGATF      240
241      PDLVSAVVGYVPGAVVHSAQNAADPAIGREGAAWLHHDKPLPHVWENNPDASWAPFDEGP      300
301      APHRHERAILTALKNAEAVARARIRVEHIHGPVMLLSGTDDGSWPSSLYSRMVTDKLTET      360
361      GHPYPVEHLDFEHAGHAILFPYVPTTQAVYAHPVSRRISTTGGTPEANAGADEASWRGVR      420
421      AFLARAVAARKQTAGN                                                  436

>MER0094525 - Mername-AA292 peptidase [M23.009] peptidase unit: 295-432 ( active site residue(s): 406 metal ligand(s): 326,330,408 ) (Cupriavidus necator) (Source: EMBL nucleotide CP002877) 
1        MWSRLREVFARELVVLVDPTNPQHARRRKQLTASVGAIFTLGMAAAMGVAPRSAFDDPLA       60
61       PRTQQALRMPDVREQLEQLTDNQAVYVREERMQRGDTIASLLKRLGVDDADAQAFIVKNP      120
121      TARGLFNLNPGQAVQAEIDESNTLVSLQANLGGDAAASRELVIERVRAASDDTAATYKAK      180
181      VQRVDNDVHYEMASGAISAGGFFKAMDAANVPDEVVQQMLSIFSGVIDFHHDIASGDRFR      240
241      IIYEAGFRDGTFVRNGRVVALELINRNQLHQALWFAPEDSKDGGAYYTFDGRSMKRPFLR      300
301      SPVEFSRVSSGFGGREHPLHHDWAQHKGVDFAAPTGTKVLATGDGVVEFVGQQNGYGNIV      360
361      ILNHANGYSTYYAHLSGFAGMRQGQPVRQGQLIGYVGSTGWATGPHLHYEFRFNDVPQNP      420
421      LTITLMESPTLTGKSRQEFLTYTSGLLSRINALRTYNVLTASN                       463

>MER0897729 - subfamily M50B unassigned peptidases [M50.UPB] peptidase unit: 8-450 ( active site residue(s): 19 metal ligand(s): 18,22,414 ) (Cupriavidus necator) (Source: EMBL nucleotide CP002877) 
1        MQTVLAFIVALCVLIYVHEMGHYLAARACGVKVLRFSIGFGRPLVRWISKSRDRTEWTMA       60
61       AIPLGGYVKMLDEREVDPERDTPIDPADLPRAFNRQPVGKRFVIVAAGPLANFALAIVLY      120
121      FALFAGGMREPVPVVAAPAAGTMAAQAGMREGDRVLLLTANGHTEAVRSWNDLRMAVFAE      180
181      GFGDTRAVLRVRGADGTERDVTLPRLPNTGGNPEQDPLATLGLNLKGGPVTITEVLPDSA      240
241      AERAGLKQGDRIVAWQGSPLTQASALIKAVRSQPGQTVTLGIERDGKRLDVPVTLDTAVA      300
301      RDGAKDASGATPAPAGKLGAALSQAVQMETVRYRPDQALARAAGQVWDTSALSLKLLGKM      360
361      LVGQASLQNLSGPLTVADYAGRAANLGLQAFVSFLALVSVSLGVLNLLPIPVLDGGHLLY      420
421      YCVEFLTGRPVPDHWQAMLQKVGIACILLLTSLALFNDVSRMFLANG                   467

>MER0094535 - oxamate amidohydrolase proenzyme ({Klebsiella pneumonia}) [T03.025] peptidase unit: 59-568 ( active site residue(s): 387  ) (Cupriavidus necator) (Source: EMBL nucleotide CP002877) 
1        MEFLGEVDPCGTGTSRRAFLAGSAALAGSTVLPAVGQELAQEPAQSGRAGLAHSSAGMVT       60
61       SPHGLASQAGLEVLKAGGNAIEAAIAIGAVLSVTYPHFTGLGGDAFLVVSDRGGNVRTFS      120
121      GIGQAASETSGYAGTIPLRGPAAALTAAATVAIWDRAFAFSRDQWGGTQSWSSLLARATE      180
181      YAANGFPVTPSQCFWQEFRSADLSGWDGFEQVFMPDGRMPRPGEMFRQPELARTLDRVAT      240
241      QGGREFYEGDLAGRLAAGLAKAGSPLREHDLARCQAREEVPLRVAYRDGELLGLRPPTQG      300
301      VTTLEIMGILDRFDLSSIPEGSADYYHLLVEAVKLAFLDRNRYVADPDFVDVPLDRLLSK      360
361      SNLDAHARRIRMDRAMAWPHVFRPGDTVYIGAADRAGRCVSMLQTVYFDWGSGLVVGDTG      420
421      VLWHNRGASFSLDPASPNVLRGGKRPFHTLNPGIYLKQGRPHLLYGTQGADGQPQTLAAV      480
481      LTRMIDYGMDPLTALRRPRFLLGKTFSDSRDSLKLEQDAGLPVFSELAARGHQLSPIPAQ      540
541      SQLAGHPGAIRIDAGGQLSGAHDPRSDGRALGV                                 573

>MER0804275 - family M20 unassigned peptidases [M20.UPW] peptidase unit: 30-497 (Cupriavidus necator) (Source: EMBL nucleotide CP002877) 
1        MPAQSTMRAAPDYATEDVRAVQAARASWREFLALLRLPNVTADAADVCKTADWLSQAFAR       60
61       RGFAVTSLSNGERPMLLAGRRCPDPAAPTILCYMHMDAQPVANQPWSQPSPWQPTLRPSW      120
121      SMPDVAYIDPSDALVGDEIDRDARLVARAVADDKGPIMMLLAALDSLAEEARGTSVHLKV      180
181      LLDSEEEIGAPNLGTVVSANREALKADAMLVLDGSMHASNRPTMILGNRGAFMTTLTVFG      240
241      PRRDLHSGQFGNYAANPVFRLAMLLASMKDDDGRVRVDGFYDGIALTDDDRRQLESVPDD      300
301      DGVLRARAGIAQPERVGGTYQEALQYPTLNVVGIAAAQVGAAARTIIPAQATATFDVRTV      360
361      PETDPERLFGLLRAHVLAQGFHLIEGEPTEDDRRRYPKLARLVQPRFNGMAHAVRTPADE      420
421      PVCRWVEGALVAAHGEAPVCIRMMGGSVPTGIAVRELGVPCVLLPLVNADNNQHSHDENL      480
481      RLGNYIDGIRMLRRLLTHPF                                              500

>MER0052527 - family M20 non-peptidase homologues [M20.UNW] peptidase unit: 7-421 (Cupriavidus necator) (Source: EMBL nucleotide CP002877) 
1        MTARDNMNPTETTLTQFIDQHRPEQEAFLAELVKVPSDNPAGDCDAHGKRAKELLEGLGF       60
61       TVEAHKVPDELVKAAGMISATNLVVRKQFGTGGPTIAMNAHGDVVPPGLGWTKDPYGGEV      120
121      ADSEHGPVMYGRGVAVSKSDFATYTYAVLALMEAEKQGATINGAVELQFTYDEETGGDIG      180
181      PKFLLDNNLSKADYAISAGFSYGITSSHNGCLHVEVTVKGKQGHAAMPHTGVDAIEAATH      240
241      ILQAIYGLRAELATRKSKVPGIDTATLNVGLIKGGINTNVVPDLVTFRVDRRMIPEEIGF      300
301      DAEGEIRAVVEKAAKDRPGIEVKVERIILAEPLSELPGVEKLIGALKSRAESVFGVEIPV      360
361      QGVPLYTDARHYTKRGIPTVLYGAGPRTLMEARGHNSDENLRLNDLNRATKVVALALSDL      420
421      MK                                                                422

>MER0094542 - gamma-glutamyltransferase 1 (bacterial-type) [T03.001] peptidase unit: 56-626 ( active site residue(s): 440  ) (Cupriavidus necator) (Source: EMBL nucleotide CP002877) 
1        MAHPDLSSMAWRGALALALTALLGACGTQGGGTATPAAPAAPTATTPPAAMPPAPEVSSG       60
61       YRPGMSTAYAQRHMAAAANPLASEAGRAILRQGGSAIDAAIAMQAVLTLVEPQATGIGGG      120
121      AFIMYWDGKNVQAFDGRETAPAGATENLFLRSDGKPMEFSEAQIGGRSVGTPGVMRALEM      180
181      AHRKHGRLPWAKLFQPAIDLAEKGFPISERLYTQVAADKFLANSPEMAAYFLDAQGKPKP      240
241      AGTVLKNPKLAQTLRDVARRGAGVLYSGPIARDIVAKVNDGSNAGSLSLADLGSYRAKQR      300
301      VPVCTDYKRWKICGMPPPSSGGIAIAQILGTLQALETKNPKYALAALKPQGVNTPAVMEA      360
361      NPDAVHAISEADRLAYADRGLYVADTDFVPVNVTGLVSPSYLATRAELIGDKSMGKAQPG      420
421      VPPGTAMAYAPDRSPPRVSTSQIVAVDDRGGAISMTTTIESYFGSHLMVRGFMLNNQLTD      480
481      FSFVPSENGKPVANRVEPGKRPRSSMAPTLVFDRESGQLVATVGSPGGSQIIEYVSKTLV      540
541      GMLDWNMDVQAAIGMGNFGSRNGPTEVEKGLVSPGLVQALQQRGHQVAEIEMTSGTQAIM      600
601      RKQGPDGKAVWAGGADPRREGVALGD                                        626

>MER0017115 - repressor LexA [S24.001] peptidase unit: 102-218 ( active site residue(s): 136,173  ) (Cupriavidus necator) (Source: UniProt Q9AGM5) 
1        MATLTPRQQQIFDLIRDTIRNTGFPPTRAEIAAEFGFSSPNSAEEHLRALARKGVIELTP       60
61       GASRGIRLKVTRSDSERPDQFSLPMPGVLQLTLPLVGRVAAGSPILAAEHIDRQYQVDAS      120
121      VFDERPDYLLRVRGLSMRDAGILDGDLLAVKKASEAANGKVVVARLGDDVTVKRLKKRGD      180
181      TIELIAENPDFQNIVLHAGRDEFSLEGIAVGLIRSSGF                            218

>MER0217466 - subfamily S1B unassigned peptidases [S01.UPB] peptidase unit: 20-184 ( active site residue(s): 35,72,150  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_005241) 
1        MTEEEVKLATCQVLGAGEAGTGWLISADHVLTAYHCLGEAADQGVSLEVSFGVGQSASKQ       60
61       QAVLDAFDTDLDVCILRLQEPSAFAPVALNVGAPRPGERWLSFGYPVSKLQIGQVLQGAV      120
121      QQALNELANGVDLDLSVSPETVLTDYRGMSGAALMTTDGCQGMLRVSVDNALGAVSTEAL      180
181      REFLAANGLLPEGEASQGDASPFASRPAFDELFESTVVKAGGGYLFLDGAHGIGKSTYCR      240
241      GFKPESANVEVLGVYAFSECSRGSTPALQVQPEVFVDWLTSLLSTRATGKPARLMQLTYA      300
301      QLIQTTHQAFQALAQRCSSDGKVGVLFIDGINEAAAVGGDALQRFVGLLPPSIPPGVQVV      360
361      VVGAGLDAIAGKLSPLLYGAERLTLPTLDEDIQYRLCASSLDAEKVTSTLVSALCERAKG      420
421      HPLYLRYLVDLVNGGASEGDLESLPPFSGSIEDYYESIWAQLLAETDAINLLSIVTRLRW      480
481      GIPTTDLMAMLTPSESAAFVPTITRIRHLLSAPDTTEVYHSSFSDFVVHKTSTQSEWVQG      540
541      RLAEFCLQPGSGDYGTLNRVFHGLRADAQKQLAAIGECQQQWVDQSVLLGAEPDVLLGDI      600
601      EDSLEAATRLGTATDIFRLLLLSQRLKFRYDTLFAQSAGLAAEALIALGKTEQAMRHILR      660
661      YGHLIVDPSDAFAIARSLIEAGHQNEALEILQKVDSLLLPILTRDGVKVGEYLNAAAVKL      720
721      QGYGLASYAGADPSTFDFLKYVIRLVKAPQNNISQEHGQKLLSDVIGNMLGNILCVAHSY      780
781      KPLSQLPIPTDTPNKDQALSLISVLAYARIHARNYGTRLPRDKVEMLLADIGSKIDDSLT      840
841      VDEKAFGVVDLLIEAGADAGLVEAYSNGVVWDAATLPLFTENRSLADEKAFVEAYARLRA      900
901      ANFLGRNQTRPMPEALEHGNWEEWLETLAQAVAWADAKVRHARATSDPAALASAKKYLND      960
961      EVLPFFRLELASRMLWAGAYFIPENILPLLYGHLADLYLDCLPDEAAELLEVIQESFDGQ     1020
1021     LGLYNEGFRRALAAVIGTLVNAGISGDTADKAFALLLRWRDYVRDNVQNRHELVPELLSM     1080
1081     VPLFARMESAEEALRTYHSVLAASMGPSWYKEDQFAVMSRVLEALPADAEIAPAALAQIA     1140
1141     AYLEHASGEMTFQRYVRSDKGTFIGELSRRGMYADAVRYFQHQAHGSIKEMCEQASDGGL     1200
1201     DRVAPLVGMRYPGGALEEQAALMQLLEHAGIHADWRVRWALLEVYQHGDERYLRDWGPAY     1260
1261     ATIIQEISHSAADLAWAVKRIGRIAHTMNAERAWMLMHSLTGALPAFLCEAFSEMLQQFR     1320
1321     ESFSPNQFDQLTARFGVRSEVVAGGPPNPDVPNAAEAAETDEEDGGEDRLFMPGTFGSRT     1380
1381     SVRDADLALEEARKHIKRRNTSAAVERAVFALRALQGGGWSIWEKGHSGSSLADTIIREN     1440
1441     VQSADELARLYGPLALNEQHVQRWTAAYHLINLIGPKLDASQRTQLLSVATEHVREMVGS     1500
1501     APSEAFSYIGATKPVSASDALLELLLWALDHPSWERRDTAAAMVLWLLRSDDALMARLAR     1560
1561     LAFSMDSGSRADVAAGALDILSRETPASLWERVVRFVDVNEVVRACTHAGRFATLLRIAD     1620
1621     RASNKGVASAADAVKVLRAKPIAHPSPEDPAKSRLHADHVPPSLTASWRELTRLGILNDA     1680
1681     ALQRAASILQDSCGPYALSDVQQLDSLAARRHGEWAGVVPDRWAARVRFALNVALFAPAS     1740
1741     IEQLAKIEAALRIYNPESLVEPPDGRRLVAGLIDAMESGNETRFLPSSDDLVFLDVQCYL     1800
1801     ERRRQVIKVDLTSHLLPPGQREPNSGQLGTFKPTELPRPGPSDQLTVCGRVKPGLAHFGA     1860
1861     LTPAIANPQFVDLLRAPPSAMVRYHWRDGSTVRTRGVSRRHEVSILAIRRDALTLPAGWR     1920
1921     MQWMLRINGQVRAVLHKA                                               1938

>MER0017175 - family S33 non-peptidase homologues [S33.UNW] peptidase unit: 61-134 ( active site residue(s): 0,0,112  ) (Cupriavidus necator) (Source: EMBL nucleotide X97984) 
1        MTELSESTTSKFVTINEKGLSNFRIHLNDAGQGEAVIMLHGGGPGAGGWSNYYRNIGPFV       60
61       AAGYRVILPDAPGFNKSDAVVMDEQRGLVNARAVKGMMDALGIDKAHLVGNSMGGAGALN      120
121      FALEYPERTGKVIL                                                    134

>MER0863976 - family M38 non-peptidase homologues [M38.UNW] peptidase unit: 54-105 ( metal ligand(s): 0,0,0,96,98 ) (Cupriavidus necator) (Source: EMBL nucleotide AM260480) 
1        MSVTRRQFIASAAALGAAPLSETFAMPPGSQPSLILVNGKFATLDKSRPQADAVAIRDGR       60
61       FVAVGTRQDIMKLAGAQTKVVDLNGRRAIPGLIDSHMHIIRGGLNYNMELRWDGVRSLAD      120
121      AMRMLKEQVARTPAPQWVRVVGGFTEHQFAEKRLPTIEELNAVAPDTPVFILHLYDRAIL      180
181      NGAALRAVGYNKDTPNPPGGEIARDARGNPTGLLLARPNATILYATLAKGPKLPPEYQKN      240
241      STRHFMREVNRLGVTGVIDAGGGYQNYPEDYSIIEELHQAGQLTVRLAYNLFTQKPKEEL      300
301      SDFKTWASRVKPGQGDDLYRHNGAGEMLVYTAADFEDFRVERPEMAPSMEADLEPVIRLL      360
361      AEKRWPWRLHATYDQTISRALDVYEKVAKDVPFNGLNWFFDHAETISDRNIDRIAALGGG      420
421      IAVQHRMAYQGEYFVERYGARAAEATPPVKKMLEKGVKVGAGTDATRVASYNPWVSLYWL      480
481      TTGKTVGGMSMYPQANLLDRETALRLWTEANTWFSSETGKKGQIKAGQLADLAVLSADYF      540
541      SVPGDEIQDITSVLTILGGEVVYGDGDFGKLSPAIPPAMPDWSPVRHAGGYQPRPQAQKL      600
601      ALNTACGCASSCGVHGHAHARAWTAGVPTSDESTFWGALGCSCWAF                    646

>MER0861565 - family M38 non-peptidase homologues [M38.UNW] peptidase unit: 27-73 ( metal ligand(s): 71,73 ) (Cupriavidus necator) (Source: EMBL nucleotide AM260480) 
1        MSDPTSAHAPHYDLLIAGGTVIDGSKAPRFSADIGVRDGCIAAIGDLAGHTADRVLDATD       60
61       LIVAPGFIDAHTHDDQAVLSQPTMPFKVSQGVTTVIAGNCGISAAPLRADMDLPMPLSLI      120
121      DTPAQGRFTTFAAYLDALRTMPSSVNVAAMVGHSTLRAVTMAALDRPADAKEIAAMQALV      180
181      EEAMQAGAIGLSTGTFYPPAAMATTEEIIEVCRPLSVRKALYVTHMRDESDHVMASLDET      240
241      FRIGRELDVPVVVSHHKVQRQANFGKSQVTLPFIREAMKHQCVSLDCYPYTAGSTMIRTD      300
301      RGMLDGRVLIAASEPHPECAGRDLDDIAREWGVPKDEAARRLQPGTAIYFQMDEDDVQRI      360
361      LAFDETMIGSDGIPVGASPHPRLWGTFPRVLGHYCREVGLFPLETAVWKMTGLTARNFGL      420
421      HRRGTLTVGNHADIVVFDAANVRDAASYETPTRPAEGIDTVIVNGTITWQHGAHSGARDG      480
481      QVITRPAGPEAGNAAPA                                                 497

>MER0054812 - subfamily S1C unassigned peptidases [S01.UPC] peptidase unit: 115-380 ( active site residue(s): 132,162,236  ) (Cupriavidus necator) (Source: UniProt Q0K6A2) 
1        MLRRFWLFFAQAVTVVLAVWFVVATLKPDWLQRGRVAVQSGSPIVALKEVVPNVSGPAAE       60
61       GSYSEAAQMAMPAVVNIFTSKNGNKRSPNPQAEDPWFRFFFGDRLPERQEPVSSLGSGVI      120
121      VSAEGYILTNHHVVDGADEIEIALTDGRKANAKVVGSDPETDLAVLKVTLKDLPAITLGR      180
181      LENVKVGDVVLAIGNPFGVGQTVTMGIVSALGRSHLGINTFENFIQTDAAINPGNSGGAL      240
241      VDAQGNLLGINTAIYSRSGGSLGIGFAIPVSTAKQVMESIISTGSVTRGWIGVEPQDMTP      300
301      EIAESFGLDAKEGALIAAVVQGGPADKAGVKPGDVLTKVDGLSITDTTALLNAIAQLKPG      360
361      VDIKMTVIRRGKATDLTVTIGKRPPPPRRALPFEEEE                             397

>MER0904391 - subfamily S1C unassigned peptidases [S01.UPC] peptidase unit: 110-363 ( active site residue(s): 127,157,228  ) (Cupriavidus necator) (Source: EMBL nucleotide AM260479) 
1        MMFRSPALARAVVMAAMMLLGPTVAEVSHAQAAASNYNLPDFTDLVEKASPAVVNIRTTE       60
61       LVRQRGAPGGDDEMAEFFRRFFGVPMPGAPAPGAPRRGQPPQQEEQSRGVGSGFIISQDG      120
121      YVMTNAHVVADAETIYVTLPDKREFKAKLIGSDKRTDVALLKVEASGLPRLPLGDSNKVR      180
181      AGEWVLAIGSPFGLDNSVTAGIVSAKGRDTGDYLPFIQTDVAVNPGNSGGPLINLRGEVI      240
241      GINSQIYSRSGGYMGISFAIPIDEAMRVSEQLKSSGRVTRGRIAVAIGDVTKEVADSLGL      300
301      GRARGALVGSVEPGGPAEKAGIEAGDIILKFNGRDIERASDLPRMVGETKPGTRVPLQLW      360
361      RKGAVREVTITVTELEPDGKAKARSGATPKDDSAAQAGKPNALGLVVNDLPEARLKELKL      420
421      KSGVEVEVADGPALRAGIRPGDIILRLGDTDVTNARQFNELVRSLDKNRIAAVFVRRGDA      480
481      TQVLTLRPGATSSR                                                    494

>MER0861030 - family M38 non-peptidase homologues [M38.UNW] peptidase unit: 46-110 ( metal ligand(s): 0,0,0,95,97 ) (Cupriavidus necator) (Source: EMBL nucleotide AM260479) 
1        MRCIARALAHAMAVGCLVAASGAQAQAGAYADRILVNGTVLTMNATDTVAQALAIRGDRI       60
61       AAVGTSRDIRRLAGPRTEVIDLGGRTVIPGLIDTHIHAIRGGQSYAFETYWYEGETTSLA      120
121      AGLGLLRKTALSRGPGKWVAVTGSWHPDQFTEKRAPTPAELTALLPDNPAYVQYLYDYAL      180
181      VNARAIEALKLDQPDALPPGIRVERDSEGRPTGRIFGAIRPLSALFGRILAQSQVDARAS      240
241      LQSFFSRLNSLGVTALIDPTAGPGPAYDPLYALWREDSLSLRVGYRIPTMVAGNEAEWFR      300
301      NTLAYLPPRLGDGKLRFLGPGEMLVFGMDDGVKMGPGFQPSAKDREELLKVATFAASRGY      360
361      PVEIHAYTDDAASAILDVFEEVGKCHDLGKLRWAMAHLNTGKPETFRRMKALGLSYTVQM      420
421      GPYFEAGAIGHANDHHVAEAAPPVRLALQHGLKVAGGTDATRIGIPGVWRALEFHVGGYS      480
481      IGKEVRRKEDFRLSRLEALRLYTANAAWISFDEASRGTLEAGKLADLAVLDKPYLTVPVE      540
541      DIHRIRSVLTMVDGKVVHADGGFAARKAR                                     569

>MER0863780 - family M38 non-peptidase homologues [M38.UNW] peptidase unit: 15-67 ( metal ligand(s): 0,0,0,63,65 ) (Cupriavidus necator) (Source: EMBL nucleotide AM260479) 
1        MSAHDSLDLVIRRADVVTASDRFRCDIGVRNGQIVALGHALPQGAREIDADGLLALPGGV       60
61       DGHCHLDQPMPDGLRMADDFFTGTRAAVCGGTTTVIPFAAQEKGASLKAAVADYHRRAEG      120
121      RAVIDYAFHLIVADPTPAVLADELPALIRKGYSSFKVYMTYDDLKLSDREMLSVLDVAKQ      180
181      NGALVMVHAENADCISWLTDKLVGEGRIAPRFHGLARPAAVEREATHRAITFAELVDVPI      240
241      LIVHVSGKEAIEQIRWAQGRGLQILAETCPQYLYLTADDMALPGDDGYEGAKCVCSPPPR      300
301      DPENQAAVWRALTNGVFSVFSSDHAPFRYDDPQGKQPGGERPSFEHIPNGVPGIETRLPL      360
361      LFDGVARGKLSLHQFVELTSWRPARLYGLYPRKGTIAIGADADIVLWDPNQRVQIRNSAL      420
421      HHAVDYTPYEGIEVTGWPVHCFSRGEMLVRDGQYQEPQAGRGQFLPAGAPMLG             473

>MER0034895 - family S9 unassigned peptidases [S09.UPW] peptidase unit: 100-353 (Cupriavidus necator) (Source: EMBL nucleotide L36817) 
1        MSRCGRRAELLHAAGTGSGSASFPMSAAPSSSPDAPATPGLPSSPLDPQVAALLELIARA       60
61       KRPPIHAMEPEDAKIAYEKSAPILDINPPPVYMAEDLLAPARDGHAIPLRLYTPREASWT      120
121      EPLPLLVYFHGGGFTVGSVDSHDPLCRLLCGQADCMVLSVDYRLGPQWRFPTAANDAFDV      180
181      LHWVFAEAGRLGADPARIAVGGDSAGGTLAAACAVEARNAGLAPVLQLLIYPGTCARQDT      240
241      PSHRALADGYLLTADMIRWFFAQYLDQEASRDDWRFAPLDGGGAGAEVRGTCPAWIAVAG      300
301      YDPLHDEGVAYAEKLRAAGVAATLADYPGMIHDFFKLGRFVPAVAQAHAEAVAALRAAFG      360
361      TPHN                                                              364

>MER0366882 - family A31 unassigned peptidases [A31.UPW] peptidase unit: 21-154 ( active site residue(s): 33,78,104  ) (Cupriavidus necator) (Source: EMBL nucleotide X92988) 
1        MNAPAEFPYVTLADFDDPSTLIYGIGNVGRQDDGLGWAFIDRLEAESLCSGAEVQRHYQL       60
61       HLEDADLISRKRKVLFIDATKDASVASFSLERAEPRMDFSFTSHAISIPSIMATCQRCFQ      120
121      CLPEVYVLAIRGYEWELRMGLTPQARHNLDDAIAHFSMRAERQTS                     165

>MER0004125 - family S12 non-peptidase homologues [S12.UNW] peptidase unit: 47-121 ( active site residue(s): 0,89,92  ) (Cupriavidus necator) (Source: EMBL nucleotide X91878) 
1        MKRIPVARIATIAMACSLFAANASAADSVGQRQIERAVNDAIRPLMAAHGVPGMAVAVTA       60
61       GGKRYVFNYGVAAKEGRRKVDGDTLFEIGSVSKTFTATLASYGQARGTLSLADPAGKYLP      120
121      ALAGSSLGATSLLDLG                                                  136

>MER1315777 - family S13 unassigned peptidases [S13.UPW] peptidase unit: 95-513 ( active site residue(s): 126,129,375  ) (Cupriavidus necator) (Source: EMBL nucleotide FMSH01000284) 
1        MAAMPRTIAAPTASRPGALLRRLSPLLSPILAAVLLAGGPALIPAQAKAPAKTVKAAKAA       60
61       KATKAATAAKAAADPALVSAGVPAPVAAALRRAGVPASAASFYVVRLGAGTARASWNAQQ      120
121      PMNPASTMKLVTTFAGLQLLGPDYRWQTSLYADAQPGFDGTVNGNVYLRGHGDPKLVPEE      180
181      MAKLVAKARAGGVTGINGDLVLDRSYFADGLDGNGTIDGEVQRAYNVGPDALLYAFKTLT      240
241      FTLTPDPASQTVAVSVTPELAQLRLDNRLTLTNGRCGDWQSSASPSVLPQADGTVLASFS      300
301      GDYASDCGEHVLNIATLSHAEFTWGGFVAEWQRAGGRFAHLPGLRSGKVPRGAVLLARHY      360
361      GLPLADIVRDINKFSNNVMARQLFLTIGAETDRGGPASTARSTRVVQRWLARQGLDMPGL      420
421      VLDNGSGLSREERISAYDMARLLQQAAASSVGPVLIDSLPVLGVDGTLRNRLTRANAAGN      480
481      GYLKTGTLADVRALAGYVDAAEGGRYVVVSMINHPNAAQAQEAHDALLQWVYRGAP          536

>MER1269528 - subfamily S1B unassigned peptidases [S01.UPB] peptidase unit: 267-460 ( active site residue(s): 318,368,442  ) (Cupriavidus necator) (Source: EMBL nucleotide FMSH01000446) 
1        MSETTDLSSPAAASQQKSGSMATERSYRGSGADDLLDAGAGTYQGPGVASAAQPRGAVST       60
61       LRVGQAAFAEVEGDPVIKLPTIKGAESAAGAHEEVGVDAAESGEEYIQATQAELSAAVAE      120
121      SGEESAFSDLRGIEGYVDPAPAGEGALINDAGSAAAGAQQEFLPILGALVPTLVSTVGPM      180
181      FARAVAGKLSSRAQTVIRQIASRPRRPVPVGPAAKAAGNAATGVSSLLPLLATLLQTALN      240
241      KGGGESAEAEGAVDEALVTEAAAAMEVIIGIDQRLPITNTNDIPWRRICALRIQFPSGAT      300
301      YRGTGFFIGPRAIATAGHCVYMRSQGGWARKIEVMPGCNGSKRPFGQVEATVFRSVGGWV      360
361      NNGLPECDYGCIFVPPGSFGGHNLGSFGVASFDAQSLVAQPAVVAGYPGDKPFAELWGMA      420
421      EVIKAVGSKTLVYNVDTVGGQSGAPVYIKRAGVRYVVGIHNYGASSGNSATRITKPVYER      480
481      LVAWKNM                                                           487

>MER1329293 - family S24 unassigned peptidases [S24.UPW] peptidase unit: 102-217 ( active site residue(s): 136,173  ) (Cupriavidus necator) (Source: ProtID WP_011615588) 
1        MATLTPRQQQIFDLIRNTIRRTGFPPTRAEIAAEFGFSSPNAAEEHLRALARKGVIELTP       60
61       GASRGIRLKVAHSDSEMPDQFSLPMAGVMQLTLPLVGRVAAGSPILAAEHIDRQYQVDAS      120
121      VFDERPDYLLRVRGLSMRDAGILDGDLLAVRRASEAANGKIVVARLGDDVTVKRLQRRGG      180
181      HIELIAENPDFTNIIVEPGEEFSLEGIAVGLIRSSGF                             217

>MER1368497 - family A39 non-peptidase homologues [A39.UNW] peptidase unit: 357-1471 ( active site residue(s): 363,364,1445  ) (Cupriavidus necator) (Source: ProtID WP_011617648) 
1        MAEPTPAAKPREPQTAVAPLNTIALEDIGKGAARFDAWLQSASGGLVTLERIKTVAGSLP       60
61       VVGNIIALVDALGDVVTLVRTKSQNFLDWVSLGINLIGVLPAPPTMAAARMSLRPTLALV      120
121      RQELRQAAKAALGDGIIEVLVGHLNATIIGEIDDFVAKAQAKLATILNDAGVLGEKMVLE      180
181      VAGGLEKVALGKLNAAGNAQTAVSQAREGASQLLHDPKKAIGNFLNATWNAYKAAGKAVV      240
241      NTAVKVGMPAEIRQTVVAHVGQLRTMGPVLRAQMTRLADPRLQHSIGWLLSMLVQAVAAW      300
301      RKRKGNHQAANVHPKQTSQARKTGHEGELEVSSHQAPAKASPRCKNCPAPAGSTNSISFA      360
361      MGDETLSHTDFVLPGLFPIDWARTYRSSLGAYDGGEQGARWITPYTTRFDVIRKEGQEAL      420
421      RYHAADGRSHDYPLPAVGKFHHDPIDNVTLVRVSENGLTLARGFESQETYRRHGQRFRLT      480
481      GITLRSGAGVALHYDHRIDGDTVLSDVIAYQGETVFAHVGVRPDAKGRIAELWQIADSKL      540
541      VRQLSRYTYDDAGDLTMAQDENAAHWEYTYQHHLVTRYTDRTGRGMNLQWQGDGPDARAV      600
601      REWADDGSFDTRLEWDENIRLTYVTDAHGNETWHYYDILGYTYRIQHPDGLSEWFFRDHA      660
661      KNVVKHVHTDGAVDRYAYDERGNLVEHIRPDDSVVHYAWDDKDQLIKIRDAEGGLWLRDY      720
721      DIKGNLTEEIDPLGHKTAYAYNKSGLPVEITDAKGGKKQLAFTATGQLASYTDCSGKTSA      780
781      WKYGERGELVRFTDAAGNATQYHYEAGQLASVTHPDQRVERFERDAEGRLLVHTDALHRR      840
841      TAWRYNEVGLIAERTDAAGQTLGYRWDRLGRLATLTNENSASTEFQYDPVGRLLRESGFD      900
901      GKTTEYNYDPASGLLDWTVDSGQLMTDFVFDAMGRLTRRRAGLIDADNRVPHVLTETFAY      960
961      NGNGRLILAENADSRLQWFHDAAGNVVREHQHYRCLKEPLVAVWRHEYDALNQRIATVRP     1020
1021     DGHRVGVLTYGSGHVHGVMLDDRELVQFERDNLHRDIARTQGNRLAQSQVYDPAGRLLEQ     1080
1081     TLSHVEGAHAGQRMLRREYQYDAAGQLSSIRDLRRGTLQYRYDPVGRLLEANSALGVETF     1140
1141     DFDPAGNLLHDPDTRVFKADPARGRPEFHSRLQGRPKLVDNLLKQYAGTHYEWDERGNLS     1200
1201     LRVVNGVHERFAWDAFNRLVGWHNPKVEVRYRYDALGRRLSKSSSANYFENQNDGEIYRR     1260
1261     NERARLNQEYGCAFTLYGWDGDQLAWESRQEPEAGVGDHFRIIPGAERTTHYLYEPGSLV     1320
1321     PLAQAVRREAIDLLPEPAWEGDYDLDDDPLWTREIAPQPFEALAWYQCDHLGTPQELTDE     1380
1381     AGELAWSAQYKAWGAAQEAISNAARKAGIQNPLRFQGQYYDHENGLHYNRHRYYDPGTGR     1440
1441     FVSKDPIGLAGGLNLNQYAPNPISWVDPLGLACSQTRRASLREVRRQLGIPMSQQPTSQK     1500
1501     MVPLTDSSGAWILGNDKHPIMTRELTYQLNGKNVIIQDHSAGHYYNEGGVGDQPSHHNVR     1560
1561     PEDNTRTGKVDGMDDHYHFNCRNKK                                        1585

>MER1156668 - subfamily A24A unassigned peptidases [A24.UPA] peptidase unit: 69-293 ( active site residue(s): 163,227  ) (Cupriavidus necator) (Source: ProtID WP_013958060) 
1        MLSAWSASPYPTGGAPLVEALAALPPAFLVAAAALLGLVVGSFLNVVIHRMPRMMERDEA       60
61       NYIAELRGDPLPHPGRYNLMVPRSACPHCGHAIAPWENVPVLSYLFLRGRCSACKAPISV      120
121      RYPLVELACGVLSALVAWRFGPGGQALAALVLVWALLALTMIDADTQLLPDQITLPLLWL      180
181      GLLLNLGGVFVALPDAVIGAAAGYLVLWTAYWLFRLVRGKEGMGFGDFKLMAALGAWFGW      240
241      QALPALVLLSSVVGVLFGLANIVLRRQERDTPFPFGPFIALAGVVVLLFGPGVLPLFAWP      300

>MER1175749 - family C40 unassigned peptidases [C40.UPW] peptidase unit: 70-185 ( active site residue(s): 91,143,155  ) (Cupriavidus necator) (Source: ProtID WP_042886251) 
1        MPLRRTRLFSDSLRRQGLFASARLPLLCATALLLAACASSPPSRHAGLPRTPGKPMVDPS       60
61       AGLEEISIQAMSLVGTPYRYGGNTPDAGFDCSGLVRYVVSRAANLNLPRTTEAMGTRGSA      120
121      LDRSEVASGDLVFFNTTGRANSHVGIYVGQNRFVHAPSSGGTVRLEDMGKPYWASRYNGA      180
181      RRVVAEIIQPPEPASPPVPAPSVMPVAPPLPIPAPAPAPLPDDDDPIAAFANQ             233

>MER1152953 - family A8 unassigned peptidases [A08.UPW] peptidase unit: 39-177 ( active site residue(s): 131,158  ) (Cupriavidus necator) (Source: ProtID WP_042887084) 
1        MASTTSRSSRSSRPARRSNNAASSTTPLLWLAFALLVVVLDQFFKIVIVRTFTYGESRPV       60
61       TSFFNLVLVYNKGAAFSFLADAGGWQRWFFTGLGIVVGAFIVWLLYRHTGQRMFCFAVSL      120
121      ILGGAVGNVIDRVIYGHVVDFLDFYVRNYHWPAFNVADCAITVGAVLLIVDELRRVRRH       179

>MER1156475 - subfamily A24A unassigned peptidases [A24.UPA] peptidase unit: 69-293 ( active site residue(s): 163,227  ) (Cupriavidus necator) (Source: ProtID WP_042887283) 
1        MALAFSTSPFPTGSGQLLHALAALPPAFMVAAAALLGLVVGSFLNVVIHRLPRMMERDEA       60
61       NYIAELRGDPLPYPARYNLMVPRSACPHCGHAIAPWENVPVLSWLLLRGRCSACKTPISM      120
121      RYPLVELACGLLSALVAWRFGPGWQALTALVLVWSLLALTMIDADTQLLPDQITLPLLWL      180
181      GLLLNLGGLFVPLADAVIGAAAGYLVLWVAYWLFRLVRGKEGMGFGDFKLMAALGAWFGW      240
241      QALPALVLLSSVAGVVFGLASIALRRQERDTPFPFGPFIALAGVVVLVFGPGVLPLALP       299

>MER1340639 - family S33 unassigned peptidases [S33.UPW] peptidase unit: 7-312 ( active site residue(s): 113,268,296  ) (Cupriavidus necator) (Source: ProtID WP_078201254) 
1        MPDLRTLYPEIEPYETGTLDVGDGHVIYYERVGTPGAKPAVFLHGGPGGGISPDHRRLFD       60
61       PARYDVLLFDQRGCGRSTPHAGLEANTTWHLVDDIERLRVLAGVERWLVFGGSWGSTLAL      120
121      AYAQKHPQRVSELVLRGIYTVSQAELDWYYQYGVSEMFPDKWARFQAPVPEAERGNMMAA      180
181      YRKLLTGDDEDKQVEAARAWSVWEGETITLLPDPGNSAKHDDGHFALAFARLENHYFTHR      240
241      CWLEDGQLLRDAHKLADIPGVIVHGRYDMPCPVRYAYALHQAWPTADFHLIEGAGHAWTE      300
301      PGIMDQLIAATDRFAAQQ                                                318

>MER0094598 - dipeptidase E [S51.001] peptidase unit: 4-232 ( active site residue(s): 123,160,195  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015723) 
1        MTQRILLMSSSRKDNHGYLEHAGEQIHTLLRREPRKVLFVPFAGVTFSFDTYEGMVKPVF       60
61       ETLGYALESIHHSADPLRAVEQAEAIAVGGGNTFALLKRMYDAGIVDAIRARVRAGMPYV      120
121      GWSAGSNAACPTIRTTNDMPIVQPPSLRALGLVPFQINPHFISGKPAGHNGESREERLAE      180
181      FLHINAPEQVFALPEGSALFSDGTRGTVLGERHALWFPAEGKAETIREGETFPLSQITGP      240
241      AGMPDWPGFAA                                                       251

>MER0406414 - subfamily S1C unassigned peptidases [S01.UPC] peptidase unit: 139-291 ( active site residue(s): 155,185,258  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015723) 
1        MTVSRRKVPTPDAQGKEPHMMRQTIARTAVGIAALAALGGGYAYLQKEVITPGYAAPAPA       60
61       VAPAQPAAAVATPTDFSGIVAQYGPAVVNISVTARAQRTAAQMPPGIDPDDPLFQFFKRF      120
121      GPQFQGPQGGQQQLVRGLGSGFIVSPDGLILTNAHVVDGAQEVTVKLTDRREFKAKVLGS      180
181      DPQTDVAVIRIDARNLPTVRLGDPSRVRVGEPVLAIGSPYGFENTVTAGIVSAKSRSLPD      240
241      DTYVPFIQTDVAVNPGNSGGPLFNQRGEVVGINAQIYSQTGGYQGLSFAIPIDVATKVQQ      300
301      QLVAHGKVTRGRLGISVQEVNQALAQSFGLPKPTGALVNSVELDSPAARAGLKPGDVIVQ      360
361      LDNDVIDHSGDLPEHVADIKPGTQTSLKIIRKGQPMTLSVTVGTAKDRAVAQKGGGSEAG      420
421      GRLGLAVRPLTPAEKRDSGIDGGLVVEDVAGPAARVGIQPGDVILSLNGTPISSAEQLRS      480
481      LVSKSGKQVALLVQRDDARIFIPLDLG                                       507

>MER0379098 - family S12 unassigned peptidases [S12.UPW] peptidase unit: 25-271 ( active site residue(s): 89,92,180  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015723) 
1        MSRTRHSHFEQAATASPGHGSIRSPCPQERLVLNGFDALVEESMADWKIPGLALAVIRDG       60
61       EPVLMRGYGVRDSVGSAPVTTATQFMLCSITKSFTAAGLGLLVDERKLNWTTPVRDLIPG      120
121      FRLHDAVTTERITVRDLLCHHSGMPRHDWLHTPGDLDTSELLARLRHLAPSRDLRERWQY      180
181      QNLGYVIAGHVAERLSGQRWEDFTGERLLRPLGFSRFGFSADALAAAPDHAHPHTMVGDE      240
241      RLRASLSSIVKPAGGLATSVEDLAKWMRCLLDEGKVGGRALLSPAIVRDMMTPGVHIGMS      300
301      EFPEVGDQHYGLGLTVEQYRGERTVSHSGSWLGWAALMTLMPSRRIGIAVLTNRAPSAVT      360
361      ALLTYAALDQLCGHPPIDWFTCMQARRHEMLAQLQINQAARQARQHTGTSPSPSHPLHDY      420
421      AGDYSHPAYGQVTIGADGDALSWRWRGMSGQLAHRHYDVFSTAEKPAEIHPDNLALTFLY      480
481      NREGTIDSIAAPLEPLVDDIVFHRMASGDATTAAFRARCAGEYRHSVQRIEVALDAAGHL      540
541      LMTITGQPRYHLLPSEGQTFEIAELPGWRVEFRAPAQEAVDALKLFQPNGTFLALRVQP       599

>MER0372056 - family M20D unassigned peptidases [M20.UPD] peptidase unit: 16-389 ( active site residue(s): 79,136 metal ligand(s): 77,105,137,163,363 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015723) 
1        MHPILAALRDSAEEFVAVRRDLHRHPELGFEEHRTSDIVASLLAEWGYEVERGLGTTGVV       60
61       ARLRRGTGNRSLGIRADMDALPIEEATGLPYASCHPGVMHACGHDGHTTMILCAAKYLAR      120
121      RGGFSGTLNLIFQPAEEGLGGAKKMMEDGLFRKYPCDAVFAMHNVPGTASGRLLLREGAA      180
181      QASADNVTITLEGVGGHAAIPHHAADPVVAGASIVMALQTIVARNVDPLQAAVITVGAFQ      240
241      AGTVSNIIPSHAVLRLSVRALDRDVREQIEQRVRDLVSAQAQSYGVTAQVDYQRGYPVLV      300
301      NTPAETAFASQVALELLGPSHVNCQASPIAASEDFAFMLDAVPGCYLWIGNGEGGKVGGC      360
361      SVHNPGYDFNDGNIAVGAAYWALLCERFLVD                                   391

>MER0253675 - family U69 unassigned peptidases [U69.UPW] peptidase unit: 1538-1818 (Cupriavidus necator) (Source: EMBL nucleotide NC_015723) 
1        MATLTGSNGSDSISGTTSADTILSGNGNDYVSAGDGNDYVDAGNGDDIVEGGSGDDTLLG       60
61       ANGKDRVFGGLGNDNLSGGNGTDAVYGGSGDDVIGSIDGSSALYTGDNGGDTLYGDGYDS      120
121      YADYLLGAGHESARPGNDRIYGGNGDDLIYGDNGNNAALGGDDIIAGGNGKDTIYGEGGN      180
181      DKISGGAGGDTLSGGSGADVFVYNAVSDSTAAGMDVITDFQRGVDHLDLRPVLGDAGFEW      240
241      GGRQPTAHGAWFQQSGGNTYVYVDVDGNPATAEMVIKLNGLHELTKSDFAGYDNHAPTAV      300
301      ADTHAIGENNSPNPITGNVLSNDSDVDAGNVLAVANPGTYAGQYGTLTLHADGSYSYELD      360
361      NGKGQVQALRQGQQVQDTFNYEVSDGQAGAASSLSIRITGANDGATITASASEDKAVTEA      420
421      GGAGNAETGDASASGKLTVTDVDTGEAHFAAVAPESLAGQYGTFAFDSNTGAWSYTLDNT      480
481      KADALIAGQQVSDSLTVSSADQSAQQTIKVDITGANDHATISASANEDKAVTESGGAGNT      540
541      DPGDASASGKLTVTDVDTGEAHFAAVAPESLAGQYGTFAFDSNTGAWSYTLDNTKADALI      600
601      AGQQVSDSLTVSSADQSAQQTIKVDITGANDHATITASASEDKAVTEAGGAGNTDPGDAS      660
661      ASGKLTVTDVDTGEAHFAAVAPESLAGQYGTFSFDSNTGAWSYTLDNTKADALIAGQQVS      720
721      DSLTVSSADQTAQQTIKVDITGANDHATITASANEDKAVTEAGGAGNTDLGDASASGKLT      780
781      VTDVDTGEAHFAAVAPESLAGQYGTFSFDSNTGAWSYTLDNTKADALIAGQQVSDSLTVS      840
841      SADQSAQQTIKVDITGANDHATITASASEDKAVTEAGGAGNTDPGDASASGKLTVTDVDT      900
901      GEAHFAAVAPESLAGQYGTFSFDSNTGAWSYTLDNTKADALIAGQQVSDSLTVSSADQTA      960
961      QQTIKVDITGANDHATISASASEDKAVTEAGGAGNAETGDASASGKLTVTDVDTGEAHFA     1020
1021     AVAPESLAGQYGTFAFDSNTGAWSYTLDNTKADALIAGQQVSDSLTVSSADQTAQQTIKV     1080
1081     DITGANDHATITASASEDKAVTEAGGAGNTDLGDASASGKLTVTDVDTGEAHFAAVAPES     1140
1141     LAGQYGTFAFDSNTGAWSYTLDNTKADALIAGQQVSDSLTVSSADQSAQQTIKVDITGAN     1200
1201     DHATISASANEDKAVTESGGAGNTDPGDASASGKLTVTDVDTGEAHFAAVAPESLAGQYG     1260
1261     TFAFDSNTGAWSYTLDNTKADALIAGQQVSDSLTVSSADQSAQQTIKVDITGANDHATIT     1320
1321     ASASEDKAVTEAGGAGNTDPGDASASGKLTVTDVDTGEAHFAAVAPESLAGQYGTFSFDS     1380
1381     NTGAWSYTLDNTKADALIAGQQVSDSLTVSSADQTAQQTIKVDITGANDHATITASASED     1440
1441     KAVTEAGGAGNTDLGDASASGKLTVTDVDTGEAHFAAVAPESLAGQYGTFSFDSNTGAWS     1500
1501     YTLDNTKADALIAGQQVSDSLTVSSADQTAQQTIKVDITGANDHATISASASEDKAVTEA     1560
1561     GGAGNAETGDASASGKLTVTDVDTGEAHFAAVAPESLAGQYGTFNFDSNTGAWSYTLDNT     1620
1621     KADALIAGQQVSDSLTVASADQTAQQIIKVNITGANDHATISASANEDKAVTEAGGAGNT     1680
1681     DLGDASASGKLTVTDVDTGEAHFAAVAPESLAGQYGTFTFDTNTGAWTYTLDNSKVQFLA     1740
1741     AGQHVTDSLSVQSADLTATQAITVNITGANDAAVNAMPTAQVVNEDAPLVFSTTNGNALS     1800
1801     ISDVDNGSHTVTLSATSGTISLNGFAGLQFLAGDGTSDSTMTFTGSDAAINAALNGLRFV     1860
1861     GDKDYAGAATLQMQTSDGASVDSDSVAIAINPVNDAPVAAADVIYASNNTNGILIPVSAL     1920
1921     LGNDGDVDGMALSVIALGSATGAVSNLAFAPGTNNSYVMFNTDNGASGSFSYTIYDGAGG     1980
1981     TSTATVTVNVSSTNGSADVSLAGLNYQASYLDGGSNSDALTGGATGDVFIGGNAADTLKG     2040
2041     GTGDDVLRGGIGDDTLDGGTGIDMLDFSDASGAVTFTLTQSGSGTLVNLTSVGLDRDTYS     2100
2101     NMEGVIGSRFSDTLTGSSSGDIIRAGAGNDTIDGGAGIDLLDFSDATGAISLTLTQSSSA     2160
2161     TALNLVAVGLGTDSYKNMEGVIGSAFNDNLIGSSGIDVLRGGAGDDNLTGGGGNDTLIGG     2220
2221     AGVDTLTGGAGSDTFAFLRADSASVDKVTDFDRAPVAAGGDVLDLSDLLSGVTVTAANAG     2280
2281     QFIRLSEVDGNTVVSLDRDGSGTAAAFQDVAVLQGVVGLDLNTLLSNGNIHTA            2333

>MER0253676 - family U69 unassigned peptidases [U69.UPW] peptidase unit: 626-921 (Cupriavidus necator) (Source: EMBL nucleotide NC_015723) 
1        MATLTGSNGSDSISGTTSADTILSGNGNDYVSAGDGNDYVDAGNGDDIVEGGSGDDTLLG       60
61       ANGKDRVFGGLGNDNLSGGNGTDAVYGGSGDDVIGSIDGSSALYTGDNGGDTLYGDGYDS      120
121      YADYLLGAGHESARPGNDRIYGGNGDDLIYGDNGNNAALGGDDIIAGGNGKDTIYGEGGN      180
181      DKISGGAGGDTLSGGSGADVFVYNAVSDSTAAGMDVITDFQRGVDHLDLRPVLGDAGFEW      240
241      GGRQPTAHGAWFQQSGGNTYVYVDVDGNPATAEMVIKLNGLHELTKSDFAGYDNHAPTAV      300
301      ADTHAIGENNSPNPITGNVLSNDSDVDAGNVLAVANPGTYAGQYGTLTLHADGSYSYELD      360
361      NGKGQVQALRQGQQVQDTFNYEVSDGQAGAASSLSIRITGANDGATITASASEDKAVTEA      420
421      GGAGNAETGDASASGKLTVTDVDTGEAHFAAVAPESLAGQYGTFAFDSNTGAWSYTLDNT      480
481      KADALIAGQQVSDSLTVSSADQSAQQTIKVDITGANDHATISASANEDKAVTESGGAGNT      540
541      DPGDASASGKLTVTDVDTGEAHFAAVAPESLAGQYGTFAFDSNTGAWSYTLDNTKADALI      600
601      AGQQVSDSLTVSSADQSAQQTIKVDITGANDHATITASASEDKAVTEAGGAGNTDPGDAS      660
661      ASGKLTVTDVDTGEAHFAAVAPESLAGQYGTFSFDSNTGAWSYTLDNTKADALIAGQQVS      720
721      DSLTVSSADQTAQQTIKVDITGANDHATITASANEDKAVTEAGGAGNTDLGDASASGKLT      780
781      VTDVDTGEAHFAAVAPESLAGQYGTFSFDSNTGAWSYTLDNTKADALIAGQQVSDSLTVS      840
841      SADQSAQQTIKVDITGANDHATITASASEDKAVTEAGGAGNTDPGDASASGKLTVTDVDT      900
901      GEAHFAAVAPESLAGQYGTFSFDSNTGAWSYTLDNTKADALIAGQQVSDSLTVSSADQTA      960
961      QQTIKVDITGANDHATISASASEDKAVTEAGGAGNAETGDASASGKLTVTDVDTGEAHFA     1020
1021     AVAPESLAGQYGTFAFDSNTGAWSYTLDNTKADALIAGQQVSDSLTVSSADQTAQQTIKV     1080
1081     DITGANDHATITASASEDKAVTEAGGAGNTDLGDASASGKLTVTDVDTGEAHFAAVAPES     1140
1141     LAGQYGTFAFDSNTGAWSYTLDNTKADALIAGQQVSDSLTVSSADQSAQQTIKVDITGAN     1200
1201     DHATISASANEDKAVTESGGAGNTDPGDASASGKLTVTDVDTGEAHFAAVAPESLAGQYG     1260
1261     TFAFDSNTGAWSYTLDNTKADALIAGQQVSDSLTVSSADQSAQQTIKVDITGANDHATIT     1320
1321     ASASEDKAVTEAGGAGNTDPGDASASGKLTVTDVDTGEAHFAAVAPESLAGQYGTFSFDS     1380
1381     NTGAWSYTLDNTKADALIAGQQVSDSLTVSSADQTAQQTIKVDITGANDHATITASASED     1440
1441     KAVTEAGGAGNTDLGDASASGKLTVTDVDTGEAHFAAVAPESLAGQYGTFSFDSNTGAWS     1500
1501     YTLDNTKADALIAGQQVSDSLTVSSADQTAQQTIKVDITGANDHATISASASEDKAVTEA     1560
1561     GGAGNAETGDASASGKLTVTDVDTGEAHFAAVAPESLAGQYGTFNFDSNTGAWSYTLDNT     1620
1621     KADALIAGQQVSDSLTVASADQTAQQIIKVNITGANDHATISASANEDKAVTEAGGAGNT     1680
1681     DLGDASASGKLTVTDVDTGEAHFAAVAPESLAGQYGTFTFDTNTGAWTYTLDNSKVQFLA     1740
1741     AGQHVTDSLSVQSADLTATQAITVNITGANDAAVNAMPTAQVVNEDAPLVFSTTNGNALS     1800
1801     ISDVDNGSHTVTLSATSGTISLNGFAGLQFLAGDGTSDSTMTFTGSDAAINAALNGLRFV     1860
1861     GDKDYAGAATLQMQTSDGASVDSDSVAIAINPVNDAPVAAADVIYASNNTNGILIPVSAL     1920
1921     LGNDGDVDGMALSVIALGSATGAVSNLAFAPGTNNSYVMFNTDNGASGSFSYTIYDGAGG     1980
1981     TSTATVTVNVSSTNGSADVSLAGLNYQASYLDGGSNSDALTGGATGDVFIGGNAADTLKG     2040
2041     GTGDDVLRGGIGDDTLDGGTGIDMLDFSDASGAVTFTLTQSGSGTLVNLTSVGLDRDTYS     2100
2101     NMEGVIGSRFSDTLTGSSSGDIIRAGAGNDTIDGGAGIDLLDFSDATGAISLTLTQSSSA     2160
2161     TALNLVAVGLGTDSYKNMEGVIGSAFNDNLIGSSGIDVLRGGAGDDNLTGGGGNDTLIGG     2220
2221     AGVDTLTGGAGSDTFAFLRADSASVDKVTDFDRAPVAAGGDVLDLSDLLSGVTVTAANAG     2280
2281     QFIRLSEVDGNTVVSLDRDGSGTAAAFQDVAVLQGVVGLDLNTLLSNGNIHTA            2333

>MER0253678 - family U69 unassigned peptidases [U69.UPW] peptidase unit: 316-579 (Cupriavidus necator) (Source: EMBL nucleotide NC_015723) 
1        MATLTGSNGSDSISGTTSADTILSGNGNDYVSAGDGNDYVDAGNGDDIVEGGSGDDTLLG       60
61       ANGKDRVFGGLGNDNLSGGNGTDAVYGGSGDDVIGSIDGSSALYTGDNGGDTLYGDGYDS      120
121      YADYLLGAGHESARPGNDRIYGGNGDDLIYGDNGNNAALGGDDIIAGGNGKDTIYGEGGN      180
181      DKISGGAGGDTLSGGSGADVFVYNAVSDSTAAGMDVITDFQRGVDHLDLRPVLGDAGFEW      240
241      GGRQPTAHGAWFQQSGGNTYVYVDVDGNPATAEMVIKLNGLHELTKSDFAGYDNHAPTAV      300
301      ADTHAIGENNSPNPITGNVLSNDSDVDAGNVLAVANPGTYAGQYGTLTLHADGSYSYELD      360
361      NGKGQVQALRQGQQVQDTFNYEVSDGQAGAASSLSIRITGANDGATITASASEDKAVTEA      420
421      GGAGNAETGDASASGKLTVTDVDTGEAHFAAVAPESLAGQYGTFAFDSNTGAWSYTLDNT      480
481      KADALIAGQQVSDSLTVSSADQSAQQTIKVDITGANDHATISASANEDKAVTESGGAGNT      540
541      DPGDASASGKLTVTDVDTGEAHFAAVAPESLAGQYGTFAFDSNTGAWSYTLDNTKADALI      600
601      AGQQVSDSLTVSSADQSAQQTIKVDITGANDHATITASASEDKAVTEAGGAGNTDPGDAS      660
661      ASGKLTVTDVDTGEAHFAAVAPESLAGQYGTFSFDSNTGAWSYTLDNTKADALIAGQQVS      720
721      DSLTVSSADQTAQQTIKVDITGANDHATITASANEDKAVTEAGGAGNTDLGDASASGKLT      780
781      VTDVDTGEAHFAAVAPESLAGQYGTFSFDSNTGAWSYTLDNTKADALIAGQQVSDSLTVS      840
841      SADQSAQQTIKVDITGANDHATITASASEDKAVTEAGGAGNTDPGDASASGKLTVTDVDT      900
901      GEAHFAAVAPESLAGQYGTFSFDSNTGAWSYTLDNTKADALIAGQQVSDSLTVSSADQTA      960
961      QQTIKVDITGANDHATISASASEDKAVTEAGGAGNAETGDASASGKLTVTDVDTGEAHFA     1020
1021     AVAPESLAGQYGTFAFDSNTGAWSYTLDNTKADALIAGQQVSDSLTVSSADQTAQQTIKV     1080
1081     DITGANDHATITASASEDKAVTEAGGAGNTDLGDASASGKLTVTDVDTGEAHFAAVAPES     1140
1141     LAGQYGTFAFDSNTGAWSYTLDNTKADALIAGQQVSDSLTVSSADQSAQQTIKVDITGAN     1200
1201     DHATISASANEDKAVTESGGAGNTDPGDASASGKLTVTDVDTGEAHFAAVAPESLAGQYG     1260
1261     TFAFDSNTGAWSYTLDNTKADALIAGQQVSDSLTVSSADQSAQQTIKVDITGANDHATIT     1320
1321     ASASEDKAVTEAGGAGNTDPGDASASGKLTVTDVDTGEAHFAAVAPESLAGQYGTFSFDS     1380
1381     NTGAWSYTLDNTKADALIAGQQVSDSLTVSSADQTAQQTIKVDITGANDHATITASASED     1440
1441     KAVTEAGGAGNTDLGDASASGKLTVTDVDTGEAHFAAVAPESLAGQYGTFSFDSNTGAWS     1500
1501     YTLDNTKADALIAGQQVSDSLTVSSADQTAQQTIKVDITGANDHATISASASEDKAVTEA     1560
1561     GGAGNAETGDASASGKLTVTDVDTGEAHFAAVAPESLAGQYGTFNFDSNTGAWSYTLDNT     1620
1621     KADALIAGQQVSDSLTVASADQTAQQIIKVNITGANDHATISASANEDKAVTEAGGAGNT     1680
1681     DLGDASASGKLTVTDVDTGEAHFAAVAPESLAGQYGTFTFDTNTGAWTYTLDNSKVQFLA     1740
1741     AGQHVTDSLSVQSADLTATQAITVNITGANDAAVNAMPTAQVVNEDAPLVFSTTNGNALS     1800
1801     ISDVDNGSHTVTLSATSGTISLNGFAGLQFLAGDGTSDSTMTFTGSDAAINAALNGLRFV     1860
1861     GDKDYAGAATLQMQTSDGASVDSDSVAIAINPVNDAPVAAADVIYASNNTNGILIPVSAL     1920
1921     LGNDGDVDGMALSVIALGSATGAVSNLAFAPGTNNSYVMFNTDNGASGSFSYTIYDGAGG     1980
1981     TSTATVTVNVSSTNGSADVSLAGLNYQASYLDGGSNSDALTGGATGDVFIGGNAADTLKG     2040
2041     GTGDDVLRGGIGDDTLDGGTGIDMLDFSDASGAVTFTLTQSGSGTLVNLTSVGLDRDTYS     2100
2101     NMEGVIGSRFSDTLTGSSSGDIIRAGAGNDTIDGGAGIDLLDFSDATGAISLTLTQSSSA     2160
2161     TALNLVAVGLGTDSYKNMEGVIGSAFNDNLIGSSGIDVLRGGAGDDNLTGGGGNDTLIGG     2220
2221     AGVDTLTGGAGSDTFAFLRADSASVDKVTDFDRAPVAAGGDVLDLSDLLSGVTVTAANAG     2280
2281     QFIRLSEVDGNTVVSLDRDGSGTAAAFQDVAVLQGVVGLDLNTLLSNGNIHTA            2333

>MER0253679 - family U69 unassigned peptidases [U69.UPW] peptidase unit: 1953-2234 (Cupriavidus necator) (Source: EMBL nucleotide NC_015723) 
1        MATLTGSNGSDSISGTTSADTILSGNGNDYVSAGDGNDYVDAGNGDDIVEGGSGDDTLLG       60
61       ANGKDRVFGGLGNDNLSGGNGTDAVYGGSGDDVIGSIDGSSALYTGDNGGDTLYGDGYDS      120
121      YADYLLGAGHESARPGNDRIYGGNGDDLIYGDNGNNAALGGDDIIAGGNGKDTIYGEGGN      180
181      DKISGGAGGDTLSGGSGADVFVYNAVSDSTAAGMDVITDFQRGVDHLDLRPVLGDAGFEW      240
241      GGRQPTAHGAWFQQSGGNTYVYVDVDGNPATAEMVIKLNGLHELTKSDFAGYDNHAPTAV      300
301      ADTHAIGENNSPNPITGNVLSNDSDVDAGNVLAVANPGTYAGQYGTLTLHADGSYSYELD      360
361      NGKGQVQALRQGQQVQDTFNYEVSDGQAGAASSLSIRITGANDGATITASASEDKAVTEA      420
421      GGAGNAETGDASASGKLTVTDVDTGEAHFAAVAPESLAGQYGTFAFDSNTGAWSYTLDNT      480
481      KADALIAGQQVSDSLTVSSADQSAQQTIKVDITGANDHATISASANEDKAVTESGGAGNT      540
541      DPGDASASGKLTVTDVDTGEAHFAAVAPESLAGQYGTFAFDSNTGAWSYTLDNTKADALI      600
601      AGQQVSDSLTVSSADQSAQQTIKVDITGANDHATITASASEDKAVTEAGGAGNTDPGDAS      660
661      ASGKLTVTDVDTGEAHFAAVAPESLAGQYGTFSFDSNTGAWSYTLDNTKADALIAGQQVS      720
721      DSLTVSSADQTAQQTIKVDITGANDHATITASANEDKAVTEAGGAGNTDLGDASASGKLT      780
781      VTDVDTGEAHFAAVAPESLAGQYGTFSFDSNTGAWSYTLDNTKADALIAGQQVSDSLTVS      840
841      SADQSAQQTIKVDITGANDHATITASASEDKAVTEAGGAGNTDPGDASASGKLTVTDVDT      900
901      GEAHFAAVAPESLAGQYGTFSFDSNTGAWSYTLDNTKADALIAGQQVSDSLTVSSADQTA      960
961      QQTIKVDITGANDHATISASASEDKAVTEAGGAGNAETGDASASGKLTVTDVDTGEAHFA     1020
1021     AVAPESLAGQYGTFAFDSNTGAWSYTLDNTKADALIAGQQVSDSLTVSSADQTAQQTIKV     1080
1081     DITGANDHATITASASEDKAVTEAGGAGNTDLGDASASGKLTVTDVDTGEAHFAAVAPES     1140
1141     LAGQYGTFAFDSNTGAWSYTLDNTKADALIAGQQVSDSLTVSSADQSAQQTIKVDITGAN     1200
1201     DHATISASANEDKAVTESGGAGNTDPGDASASGKLTVTDVDTGEAHFAAVAPESLAGQYG     1260
1261     TFAFDSNTGAWSYTLDNTKADALIAGQQVSDSLTVSSADQSAQQTIKVDITGANDHATIT     1320
1321     ASASEDKAVTEAGGAGNTDPGDASASGKLTVTDVDTGEAHFAAVAPESLAGQYGTFSFDS     1380
1381     NTGAWSYTLDNTKADALIAGQQVSDSLTVSSADQTAQQTIKVDITGANDHATITASASED     1440
1441     KAVTEAGGAGNTDLGDASASGKLTVTDVDTGEAHFAAVAPESLAGQYGTFSFDSNTGAWS     1500
1501     YTLDNTKADALIAGQQVSDSLTVSSADQTAQQTIKVDITGANDHATISASASEDKAVTEA     1560
1561     GGAGNAETGDASASGKLTVTDVDTGEAHFAAVAPESLAGQYGTFNFDSNTGAWSYTLDNT     1620
1621     KADALIAGQQVSDSLTVASADQTAQQIIKVNITGANDHATISASANEDKAVTEAGGAGNT     1680
1681     DLGDASASGKLTVTDVDTGEAHFAAVAPESLAGQYGTFTFDTNTGAWTYTLDNSKVQFLA     1740
1741     AGQHVTDSLSVQSADLTATQAITVNITGANDAAVNAMPTAQVVNEDAPLVFSTTNGNALS     1800
1801     ISDVDNGSHTVTLSATSGTISLNGFAGLQFLAGDGTSDSTMTFTGSDAAINAALNGLRFV     1860
1861     GDKDYAGAATLQMQTSDGASVDSDSVAIAINPVNDAPVAAADVIYASNNTNGILIPVSAL     1920
1921     LGNDGDVDGMALSVIALGSATGAVSNLAFAPGTNNSYVMFNTDNGASGSFSYTIYDGAGG     1980
1981     TSTATVTVNVSSTNGSADVSLAGLNYQASYLDGGSNSDALTGGATGDVFIGGNAADTLKG     2040
2041     GTGDDVLRGGIGDDTLDGGTGIDMLDFSDASGAVTFTLTQSGSGTLVNLTSVGLDRDTYS     2100
2101     NMEGVIGSRFSDTLTGSSSGDIIRAGAGNDTIDGGAGIDLLDFSDATGAISLTLTQSSSA     2160
2161     TALNLVAVGLGTDSYKNMEGVIGSAFNDNLIGSSGIDVLRGGAGDDNLTGGGGNDTLIGG     2220
2221     AGVDTLTGGAGSDTFAFLRADSASVDKVTDFDRAPVAAGGDVLDLSDLLSGVTVTAANAG     2280
2281     QFIRLSEVDGNTVVSLDRDGSGTAAAFQDVAVLQGVVGLDLNTLLSNGNIHTA            2333

>MER0253680 - family U69 unassigned peptidases [U69.UPW] peptidase unit: 4-199 (Cupriavidus necator) (Source: EMBL nucleotide NC_015723) 
1        MATLTGSNGSDSISGTTSADTILSGNGNDYVSAGDGNDYVDAGNGDDIVEGGSGDDTLLG       60
61       ANGKDRVFGGLGNDNLSGGNGTDAVYGGSGDDVIGSIDGSSALYTGDNGGDTLYGDGYDS      120
121      YADYLLGAGHESARPGNDRIYGGNGDDLIYGDNGNNAALGGDDIIAGGNGKDTIYGEGGN      180
181      DKISGGAGGDTLSGGSGADVFVYNAVSDSTAAGMDVITDFQRGVDHLDLRPVLGDAGFEW      240
241      GGRQPTAHGAWFQQSGGNTYVYVDVDGNPATAEMVIKLNGLHELTKSDFAGYDNHAPTAV      300
301      ADTHAIGENNSPNPITGNVLSNDSDVDAGNVLAVANPGTYAGQYGTLTLHADGSYSYELD      360
361      NGKGQVQALRQGQQVQDTFNYEVSDGQAGAASSLSIRITGANDGATITASASEDKAVTEA      420
421      GGAGNAETGDASASGKLTVTDVDTGEAHFAAVAPESLAGQYGTFAFDSNTGAWSYTLDNT      480
481      KADALIAGQQVSDSLTVSSADQSAQQTIKVDITGANDHATISASANEDKAVTESGGAGNT      540
541      DPGDASASGKLTVTDVDTGEAHFAAVAPESLAGQYGTFAFDSNTGAWSYTLDNTKADALI      600
601      AGQQVSDSLTVSSADQSAQQTIKVDITGANDHATITASASEDKAVTEAGGAGNTDPGDAS      660
661      ASGKLTVTDVDTGEAHFAAVAPESLAGQYGTFSFDSNTGAWSYTLDNTKADALIAGQQVS      720
721      DSLTVSSADQTAQQTIKVDITGANDHATITASANEDKAVTEAGGAGNTDLGDASASGKLT      780
781      VTDVDTGEAHFAAVAPESLAGQYGTFSFDSNTGAWSYTLDNTKADALIAGQQVSDSLTVS      840
841      SADQSAQQTIKVDITGANDHATITASASEDKAVTEAGGAGNTDPGDASASGKLTVTDVDT      900
901      GEAHFAAVAPESLAGQYGTFSFDSNTGAWSYTLDNTKADALIAGQQVSDSLTVSSADQTA      960
961      QQTIKVDITGANDHATISASASEDKAVTEAGGAGNAETGDASASGKLTVTDVDTGEAHFA     1020
1021     AVAPESLAGQYGTFAFDSNTGAWSYTLDNTKADALIAGQQVSDSLTVSSADQTAQQTIKV     1080
1081     DITGANDHATITASASEDKAVTEAGGAGNTDLGDASASGKLTVTDVDTGEAHFAAVAPES     1140
1141     LAGQYGTFAFDSNTGAWSYTLDNTKADALIAGQQVSDSLTVSSADQSAQQTIKVDITGAN     1200
1201     DHATISASANEDKAVTESGGAGNTDPGDASASGKLTVTDVDTGEAHFAAVAPESLAGQYG     1260
1261     TFAFDSNTGAWSYTLDNTKADALIAGQQVSDSLTVSSADQSAQQTIKVDITGANDHATIT     1320
1321     ASASEDKAVTEAGGAGNTDPGDASASGKLTVTDVDTGEAHFAAVAPESLAGQYGTFSFDS     1380
1381     NTGAWSYTLDNTKADALIAGQQVSDSLTVSSADQTAQQTIKVDITGANDHATITASASED     1440
1441     KAVTEAGGAGNTDLGDASASGKLTVTDVDTGEAHFAAVAPESLAGQYGTFSFDSNTGAWS     1500
1501     YTLDNTKADALIAGQQVSDSLTVSSADQTAQQTIKVDITGANDHATISASASEDKAVTEA     1560
1561     GGAGNAETGDASASGKLTVTDVDTGEAHFAAVAPESLAGQYGTFNFDSNTGAWSYTLDNT     1620
1621     KADALIAGQQVSDSLTVASADQTAQQIIKVNITGANDHATISASANEDKAVTEAGGAGNT     1680
1681     DLGDASASGKLTVTDVDTGEAHFAAVAPESLAGQYGTFTFDTNTGAWTYTLDNSKVQFLA     1740
1741     AGQHVTDSLSVQSADLTATQAITVNITGANDAAVNAMPTAQVVNEDAPLVFSTTNGNALS     1800
1801     ISDVDNGSHTVTLSATSGTISLNGFAGLQFLAGDGTSDSTMTFTGSDAAINAALNGLRFV     1860
1861     GDKDYAGAATLQMQTSDGASVDSDSVAIAINPVNDAPVAAADVIYASNNTNGILIPVSAL     1920
1921     LGNDGDVDGMALSVIALGSATGAVSNLAFAPGTNNSYVMFNTDNGASGSFSYTIYDGAGG     1980
1981     TSTATVTVNVSSTNGSADVSLAGLNYQASYLDGGSNSDALTGGATGDVFIGGNAADTLKG     2040
2041     GTGDDVLRGGIGDDTLDGGTGIDMLDFSDASGAVTFTLTQSGSGTLVNLTSVGLDRDTYS     2100
2101     NMEGVIGSRFSDTLTGSSSGDIIRAGAGNDTIDGGAGIDLLDFSDATGAISLTLTQSSSA     2160
2161     TALNLVAVGLGTDSYKNMEGVIGSAFNDNLIGSSGIDVLRGGAGDDNLTGGGGNDTLIGG     2220
2221     AGVDTLTGGAGSDTFAFLRADSASVDKVTDFDRAPVAAGGDVLDLSDLLSGVTVTAANAG     2280
2281     QFIRLSEVDGNTVVSLDRDGSGTAAAFQDVAVLQGVVGLDLNTLLSNGNIHTA            2333

>MER0422060 - family S12 unassigned peptidases [S12.UPW] peptidase unit: 99-407 ( active site residue(s): 156,159,258  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015723) 
1        MQAQTVTRRTGFGRSRAWLAVALLVAPMSVALAQGTGQPLVVAEDEVMQGFPPPPDKQVS       60
61       RGSGLRPPYMRWAFRHAREMSPTAGIRHASQPLALAGQPGTELDGTTFAVAGKTARLADY      120
121      LRDTHTDGFIVLHQGKVVYERYLAGFGPYQPHIWASMTKSVTGLLAAMLVEEGKLDPQAR      180
181      LAQYVPELAGNPFGEATVQQNLDMEVPVGYPEGLPPDLGLFGAVGIVPRKADAPDTIYDF      240
241      LKVVHATGGRDEVGVWYYQNGSPEAVAWALRRITGKSWAQLVTERLWSRFADDDAYTQVD      300
301      RQGTEMASGGMNSTLRDAARFAEAVRRAAAGDASGGISPAAVRIALQPAGNQARFARGNT      360
361      MPGRDGYGYRNYWFQRNDGDGSIEASGRFGQKIYINPARGLTVVKFSANPDGAARATSAA      420
421      GVRKRDDPGRALESAEAMVAAALAIHRAVSR                                   451

>MER0483399 - subfamily M24B non-peptidase homologues [M24.UNB] peptidase unit: 157-376 ( active site residue(s): 234,324,335 metal ligand(s): 253,264,328,357,371 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015723) 
1        MAHLTKAVHDYRLAAMHRLMDKLRVDALVFGTPDFFQYATNFQLDVWPWERPVFVVVPRN       60
61       GDTFAVMNELSTNHMRFATEKGTVWLADITYYSEHPRVSNRLPLPAQLPEVVAALLGARG      120
121      LGMSRIAVDVQHPILAGAQRYLPELTLRPAMAEMRSLRWVKHAEELQVMRELGALTDWVQ      180
181      DRYRENFRPGRLVQELDHAMAALMSEEAARRFPGEDFDILKCWTLTGPASASPHGDGAGC      240
241      GARICAGDTIVNLVLPRLNGLYVENERTWFCGRPGGEQARLYQVAAKATDAAVAAAVVGK      300
301      RVCDMDAAAQAVIEQAGCGDYVFHRTGHAVGLMLHEYPEDMAFNTRPLLAGEVYSAEPGL      360
361      YVYGLGGFRLDDTVVVGDQPEVIIKTPKTLEFATVD                              396

>MER0253030 - homomultimeric peptidase [U56.001] peptidase unit: 27-256 (Cupriavidus necator) (Source: EMBL nucleotide NC_015723) 
1        MNNLHRELAPITSAAWSQIEEEVARTFKRSVAGRRVTDVIGPGGPELAGVGTGHLLDLEA       60
61       PLQGVGAKLREVRALVQLTVPFELQREAIDSVERGARDSDWQPAKEAAKQLAFAEDRAIF      120
121      DGYRQAGVVGIHQGSSNPKFTLPADVNEYPQVISDALEALKLVGVDGPYSVLLGADAYTA      180
181      LAGGRDQGYPVIDHIKRIVSGEIIWAPAISGGSVMSTRGGDYALHLGEDLSIGYSSHTEQ      240
241      VVRLYLRETLTFLMLTSEASVPLELTGQAPGK                                  272

>MER0317524 - family M81 unassigned peptidases [M81.UPW] peptidase unit: 72-463 (Cupriavidus necator) (Source: EMBL nucleotide NC_015723) 
1        MATRILIAGFQHETNTFAPSKATYASFERGEGFPAMVRGDDVLSLRDVNIPAGGFIAAAE       60
61       RRGWTLLPVIWAGASPSAHVTEDAFERIAGEIVEAARAGGFDAVYLDLHGAMVAEHTDDG      120
121      EGTLLSRIRAVAGPGVPVVASLDLHANVTRAMLEAADALVAYRTYPHVDMAETGERAAAL      180
181      LQRLLEGRGPLHRAVRRLPFLIPINGMCTMLEPARAMYSLLQQGESGAVVSLSFAPGFPA      240
241      ADFPECGPVIWGYGEDAAAVDAAVRALYDRMLADEPAWEVPFLSPDEAVLEAMRLAEGAT      300
301      RPVVIADTQDNPGAGGDSNTTGILRALLRHGARHAAIGLIWDPAVAAEAHRAGVGATIDV      360
361      ALGGVSGVPGDEPLRGRFEVLKLSDGVCRYGGPMMNGMLADVGPVALLSIDDVLVVVSAG      420
421      KAQMLDRNLFRVGGVEPEAMKILVNKSSVHFRADFQGIAHAVLVAKAPGPMTADPADLPW      480
481      TRLAPGIRLKPMGKPFQG                                                498

>MER0267822 - subfamily M20A unassigned peptidases [M20.UPA] peptidase unit: 41-417 ( active site residue(s): 113,174 metal ligand(s): 111,140,175,199,391 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015723) 
1        MPFSVRHVAVAAALTLAGAGTLASAAQPDAALLSAAQSAQPALVQSLKEMVTIESGSANA       60
61       KGLAQMAGYTEKRLKALGAKVERMPVTKGPGTMVKATFTGTGKRRIMLIAHMDTVYPENT      120
121      LATQPIREEGNRLYGPGIADDKGGIAVILHSLEILKNQGWRDYAQITVLFNPDEEVGSVG      180
181      SGEAIAALAAQHDVVLSCEPTAAKDVVKAESLLLGASGTATATMQVKGRASHAGAAPERG      240
241      RNALIELAHQLQQTRDTASQVPGSQLNWTQAQAGTVRNQIPESAVAYGDVRTTAAGAAEK      300
301      LKVALQEKAKSSQLVPETQTTVTMEEGRPPFVADARGRALAKRAQEIYAELDGRTLALAE      360
361      GTGGATDASYAARSGKPAVVESFGLAGFGYHARDEYIELDSIVPRLYLMTRILQDIGRN       419

>MER0389967 - family M81 unassigned peptidases [M81.UPW] peptidase unit: 1-480 (Cupriavidus necator) (Source: EMBL nucleotide NC_015723) 
1        MRVFSASLATETNTFAPMPTGLSSFRDRGYFAAGQHPDQMTFFSGPLWAARIRGKERGWQ       60
61       LCEGMVAGAQPSGTTTRHAYETLREELLTDLRAALPVDMVVLGLHGAMVADGYDDCEGDL      120
121      LQRVRAIVGPEVVIGAELDPHCHLTPEMVAYADVLVAFKEYPHTDVLERALELVDLCAAT      180
181      VEGKVRPVAAVVDCRMIVTVHTSREPARGFIDRIQSLEGRDGVLSISVAHGFSWGDVPGM      240
241      GTKVLVYADGNQARADALARQLADELIAMRDGLTVRYPDIDTSLDEALAFDAGPVVLADG      300
301      ADNPGGGAASDSTFILRRMIERGIGNAAVGPMWDPIAVRIAFDAGVGARLSMRIGGKISP      360
361      LSGDPLDLDCTVKALLPDMVMTGLSDAPVPMGDCALVEANGIDIVLITLRNQAMGTDMFT      420
421      QLGCDLARKQIIVVKSSQHFYACYSKVAGHVIYAGAPGAVTLDLTTLAYRKIQRPKWPLD      480
481      STAA                                                              484

>MER0469183 - subfamily M14B non-peptidase homologues [M14.UNB] peptidase unit: 2-128 ( active site residue(s): 0,115 metal ligand(s): 0,63,66 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015723) 
1        MHPHAGFPEYDQLLALLDTGSHVLDTRVVCETMVQGRRFGVHAATLGSRDPGAPAIGIFG       60
61       GIHGLERIGTQLVLDYLRSVLSRLAWDELLHRELQSVRLVFMPIVNPGGMWAGTRANPNG      120
121      VDLMRNGPQDADARVPFLAGGQRIGAWLPWYRGTAGAPMEAESRALLRVVQEELLPRPLS      180
181      FAVDCHSGYGWRDSIWFPYAGTRRPMAHLPEMYLLKTLFEQAHPHHGYTFEPQSHQYLLH      240
241      GDLWDHAYDLTPHGNLFLPMTLELGSWLWIKKNPRQLFSREGIFNPIKAHRTARVLRRHV      300
301      SLFDFLGRVAFAPDRWLPRGAQRDDLLLQARAHWQTEAPP                          340

>MER0422061 - class C beta-lactamase [S12.006] peptidase unit: 38-386 ( active site residue(s): 90,93,176  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015723) 
1        MKRIPVARIATFAMACSLFAANASAADSVSQRQVERAVNDAIRPLMAAHGVPGMAVAVTA       60
61       GGKRYVFNYGVASKAGGRKVDGDTLFEIGSVSKTFTATLASYGQARGALSLADPAGKYLP      120
121      ALAGSSLGATSLLDLGTYAAGGLPLQFPDAVTDTRSMVDYFRGWRPRYAAGTHRQYSNPS      180
181      IGLFGYLAASSMGQPFDDLMEKTLFPALGLAHTYIRVPKARMGDYAYGYSKDGKPVRVAP      240
241      GVLDAEAYGVKTTAADMIRFVEANIDSAGLDDKLRRAIAGTHTGYFKVGDMVQGLGWEMY      300
301      AWPTRVDSVLAGSSPQVVLEANPVSRLEPPLSSPADVLVNKTGSTNGFGAYVVFVPAKRI      360
361      GIVMLANKNFPVPERVKAAFRILAVLDGVPAGAGSR                              396

>MER0372125 - family M20D unassigned peptidases [M20.UPD] peptidase unit: 17-392 ( active site residue(s): 84,141 metal ligand(s): 82,110,142,168,366 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015723) 
1        MNQAPLADLHQSIQTLSPEFVEIRRKIHAHPELAFEERRTSDLVAGRLAAWGYEVHRGMG       60
61       TTGVVGRLRKGQGSKALGIRADMDALPIQEKTGLDYASTIAGKMHACGHDGHTAILLCAA      120
121      RYLAESADFNGTLNLIFQPAEENEGGALRMLEDGLFEQFPCDEIYALHNSPGLPVGQIGV      180
181      IAGPAMASFDRATVTLRGRGAHGAMPHHGIDAMQCAASIVLGLQSIVSREIDALKSAVIT      240
241      VGSIQAGTTYNVVPDSATIKIGVRTLDPQVRTLVEARISEFVAAQAQSFRLQSEVVYERK      300
301      YPVLVNHDAQTERARQAAIRLVGADNVVERPPVMGSEDFAYMLEHRPGAYIRLGNGLGED      360
361      GGCMVHNPLYDFNDKALPVGAAFWAHLTQSYLV                                 393

>MER0332190 - family S12 unassigned peptidases [S12.UPW] peptidase unit: 174-331 ( active site residue(s): 174,177,280  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015723) 
1        MSLKTLPESSRPWRRLACMALCAASLPAWSQSAGSTAGSAAAPAAAAPTLVAALDSDPNR       60
61       LGWMQGFPPPPDKLITHTPGADRFPRNRWLFSHIRELVPTASVWRGAGPASALPRAERDI      120
121      GAVAFTDVDGTRRTFDEMLALTYTDGILVMHKGKVIYERYFGALDGHTPHIAMSVTKSFV      180
181      GTLAAMLAADGKLDPAAPVTRYLPELAGTAYGDATVRQVMDMTIGVRYSEDYANPKAEVW      240
241      DYARAGGMLGRPAGYSGPGSFYDFLKTLQKEGDHNAVFAYKTVNAEVLAWIVRRASGQSL      300
301      AKLLSERIWQPMGAEQDAYFTVDSIGTESGGGGLNTTLRDLARFGETIRGNGRFNGKQII      360
361      PASVVADIRGGGDRDQFARSASAPVLPGWSYRDMWWVSHDSHGMFQAAGIHGQRIYIDPK      420
421      AELTIVRYASHPVAGNAANNPITFRAFRALAETLMR                              456

>MER0253587 - subfamily S1C unassigned peptidases [S01.UPC] peptidase unit: 49-293 ( active site residue(s): 55,85,161  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015723) 
1        METSTPSGNPLQDLSANLAAIAERVGQSVVAVHGRHRFPSSGVIWQPGVVVTAAHTLRQE       60
61       DGIEVTLADGRTVAAVLVGRDPGTDLAVLRLDGVASNPVETGDARSLKAGHLVLAVARVD      120
121      RLGTSADFGVVGTAGGPWRTWRGGQFDAFVRLDGGLRPGFSGAALADMQGRVTGLCTSAL      180
181      APGAGILIPAATVARVSGELLSKGRVSHGYLGVGTQPVSLSESWVTKLNLASGRGLLVVS      240
241      LAAGGPAEQAGVLIGDVLIELDGKPCQDMDDVHAALGGDRIGQLLKIGLIRGGERKECSV      300
301      TVGERQQRKSCG                                                      312

>MER0389968 - family M81 unassigned peptidases [M81.UPW] peptidase unit: 1-491 (Cupriavidus necator) (Source: EMBL nucleotide NC_015723) 
1        MRFVIALMRHETNTFSPIATPLSAFNRGSTAGPLYGDDAVRACQGTNSAAAAFIDLVRRQ       60
61       GDEFVMPLMANAVPSGMVTAQAFESMAASIVEAVRAGCDAVMLDLHGAMVAEGYPDAEGE      120
121      LLARIRAAAPEVPIAVSLDFHANFSAALVDNATVIAGYCTYPHVDVYETGARAARTLMAA      180
181      LRGEARPVLLWRTLPMLTHMLRQTPRAQPMKDIMERAMAAERDGEVLNASVFGGFPLADI      240
241      PHTGLAVVIVADGARIEAGRRLLDDLCGMAWERRADFVFPIEPMAESIARAKTLTQGPVV      300
301      LVDHGDNCGAGGPTDEMTVLGEVLRQGLEGVVAGPFWDPSAVAELIAAGVGQSVTLDVGG      360
361      KTDMPALDLKGRPLRLSGRVQCITDGNYQVTGPMFTGMKLSLGRTVVLDVAGTLVVICEK      420
421      PQEPFDTGVFTHAGIDLSRRKYILVKSRQHFRAGFEPIASEIVLVAGPGVCSSDYSQFPF      480
481      RNLRRPIYPLEAHTVLEAA                                               499

>MER0253211 - gamma-glutamyltransferase 2 (bacterial) [T03.014] peptidase unit: 3-609 ( active site residue(s): 415  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015723) 
1        MFTTRPEIVGTFGVAASTHWLATQTAMGVLERGGNAFDAAVAAGFVLQVVEPHLNGPGGE       60
61       VPIVYWNERERAMRTVCGQGPAPALADPGALRAMGLDLVPGIGLIPAAVPGAFGAWLTML      120
121      REHGTWSLADVLAPAIGYARDGFPLVPRISRAILAVQALFRDEWQSSARTWLPDGKVPRP      180
181      GSLHTLPALAATYTRIIEEAQRHSDTRTGQIDAALDCWYRGFVAQEIDAYCRNTPVRDTT      240
241      GDKHTGLLRYDDMASWAPEIEAPVTLDFGRYTVAKCGVWSQGPVFLQQLGMLRHAALEQH      300
301      APDSPEFVHRIAEATKLAMADRLAWYGDPHFAPSPLAALLDDGYLAARAQRIGTRAALSL      360
361      DPGMVNGMAPRLPDLAAAERTLQRADVRFGVGEPTFAELPPVAEWAEQEIFVGDTCHIDV      420
421      IDRHGNMVAATPSGGWLSSSPTIPSLGFALNTRLQMTWLEPGLPNTLAPGQRPCTTLSPS      480
481      LALRDGEPYMVFGTPGGDQQDQWSLAFFLRHAVHGMNLQEAIDAPAWHIDHFPASFWPRQ      540
541      TVLNRISVESRFPEATLAALRELGHEVRIGEPWSEGRMSACSRERDPRGRLVLRAGANPR      600
601      GMQGYAVGR                                                         609

>MER0253002 - subfamily M20A unassigned peptidases [M20.UPA] peptidase unit: 24-426 ( active site residue(s): 123,184 metal ligand(s): 121,150,185,209,396 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015723) 
1        MPCRIFSLRAAVLFIAGATLAGTAAATAVEPVHQFARQEKPALIATLKDLVSIESGSKDI       60
61       EGLDRIATLIRDRLAALGATEAKLVEPAEIYRMEDTPKQVGKMVMAQFKGSGKRNIMLIA      120
121      HMDTVYLRGMLAQQPFRIEGDRAYGLGIADDKNGVAVILHTIAILQKMKFKDYGTLTVLI      180
181      NGDEEISSPGARAVLTRLGAQQDAVFSCEASRVTGDRLSLATSGIGSIYLTAQGKASHAG      240
241      SAPEQGRNALYELSHQVLQMRDLSNPATGLKVNWTVSSSGTNRNVIPATATAQADVRVLR      300
301      TADYDSLEKTLQERIRKQLIPDTKVDVKFERRRPPLEVSDPARKLAAHAQGIYAEIGETL      360
361      QVHDTAEGGGTDAAFAAADTKAPVIERFGLRGFGAHSNDAEYVDLNSVTPRLYLLTRMIM      420
421      DVSQDKAGR                                                         429

>MER0372059 - family M20D unassigned peptidases [M20.UPD] peptidase unit: 9-388 ( active site residue(s): 80,137 metal ligand(s): 78,106,138,164,362 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015723) 
1        MHPDPVLPGIRAIEAEMVDLRHRIHAYPELGFEEFATSDLVAECLQAWGYAVHRGLGGTG       60
61       VVGTLRHGEGRAIGLRADMDALPIREATGLPYASKIDGKMHACGHDGHTATLLAAARYLA      120
121      EHKPFRGTLHVIFQPAEEGMGGAREMIRDGLFRLFPCDAVFALHNMPGHPTGKFGFLGGP      180
181      FMASSDTVTIRVTGRGGHGAVPQRAVDPVVACASMVMALQSVVARNVNPLDMAIVTVGAI      240
241      EAGKAPNVIPESAELRLSVRALKAEVRDLLQARITTLAHAQAESFGASAEVHYDRRYPVL      300
301      VNDPATTEMAREVAREWLGEDGLIDNMVPLTGSEDFSFMLQECPGCYLIVGNGDGEGGCM      360
361      VHNPGYDFNDACLPLAATYWIKLVERYLR                                     389

>MER0378280 - cephalosporin C acylase precursor [S45.003] peptidase unit: 276-631 ( active site residue(s): 276  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015723) 
1        MLRTPRRLIAALALLATTIPAAMAEVPARNNLLAVPGLEKPASVLVDRWGVPHIYAGTLY       60
61       DAFFVQGFMAARDRLWQIDLWRKRGLGEMARDFGPAYADGDRMARAVLFRGDMYREWLAY      120
121      GSDAKRVAEAFVAGVNAYVALTEQRPELLPPEFRKLNYKPARWQAEDIVRIRHHGLTLNF      180
181      TGEVERAQLYCQAKQDAPRADWLRRELDPQIEPRLSPGIDPCTVPAAELRRAYELATAAA      240
241      RFPKEAWGNAQAASIPLDQLYALVDPNSDTGRSLGSNNWVIGGKRTTTGRPILANDPHRS      300
301      HGAPSLRYISHLNAPGMSVIGAGEPFLPGISIGHNGTIAFGLTRFYMDQEDLYGYELNPA      360
361      NPHEYKYKGRWEPMETITEEIVVKGESTPRKVTIDFTRHGPVLVADAGRAQAWALRAAWL      420
421      DYGMAPYFGSMDYMRARNWDQFRAAMNRWGAPGENQVYADTSGNIGWIPGGLTVKRPNWD      480
481      GLTPVAGDGRYEWAGYRNMDELPWAFNPAPGYIVTANENNIPPEHPAAKLGVGYEWSDSS      540
541      RARRLKALVGANARSSVQDSMAWQNDTVSLPAQRAVAMLQDVRSDDPQLARGLDLLRNWD      600
601      GNERADSAAAALFEVWFSKHLRQAVVRAALPPEAARLVGAGDAARVLAVREQPGPRMPVE      660
661      RRNAVMLESLKAAMAELEAKLGPDPRAWQWGKLHTAVFTHPMDPILSDAERQQFNVNAGP      720
721      IGGSAFTPMNTSYRNTDFRLTAGASFRMVLDVGNWDASRVVNTPGQSGNPASPHYRDLAP      780
781      LWAKGEYFPLVYTRKAVEKASRERLELVPQ                                    810

>MER0470340 - subfamily M16B unassigned peptidases [M16.UPB] peptidase unit: 139-895 ( active site residue(s): 146,218 metal ligand(s): 143,147,225 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015723) 
1        MTACYRYLQRLTRWIRTFPSGAQAWAAAQFLAGAAARMRFVPHPPTHCHRPPGDAMRRTA       60
61       LHLSLLASLACAPALAQPVQTAPAATPARATQVASVEGITEYRLPNGLRIVLAPDAAKAT      120
121      TTVNITYLVGSRHENYGETGMAHLLEHLLFKGTPALPDKTIPTEFARRGMSVNGTTAQDR      180
181      TNFFGTFSANDDNLDWALRMEADRMVNSVISRTDLDSEMTVVRNEMEMGENSPGRMLMQQ      240
241      TMAAAYRWHNYGKAPIGARSDVEQVSIDNLRAFYRRYYQPDNAVLVVAGKFDPAATLARI      300
301      ERYFGPIPRPTRVLPPEHTVEPAQEGARELVVMRPGDNSLVAAQYHVSPGAHPDSTALSL      360
361      LTIILGDTPGGRLYKALVERGQAVSVGTALYAMKDPGALLLMVETSKDQPLAAARAGLIT      420
421      QVEGFAEAPVTEAELERARVRMRNAYEHYMNDPGALGIALSEAIAKGDWRLFFLARDRIE      480
481      TTTLADVQRVALNYLQASNRTVGVFLPVEQPSRTQVPPAPDVTAMVSGYQGRQAMAAVAA      540
541      FDPSPANIEDHTTRQTLANGMQLALLPKPARGEVVHGTLVLRMGDVQSLQGLTTVGALTA      600
601      SMLRRGAAGMDRQQIADRIEALRARVGISGGSERVTVSFDTRRAHLPELLALLRDLLRAP      660
661      TFPEAELETLRKTSIAEIESIQREPGVMASNALGRHGDPYPAGDPRHARTFAENIDDLQA      720
721      VTLAQVRDFHARFYGAGHAQLSLVGDFDAPAAAAQAAQLFGDWSAPQPYARVERPYVPIP      780
781      PAEFTLPAPGKANAIYLAAAPIDLTNDAPDYALMMIANRVLGGASLRGRLADRLRQREGL      840
841      SYGASSWVQVGALDRAGRFGLQAQYAPQNLARLQRAMAEELERFVRDGITAQELAEAVSG      900
901      LLQQGMVSRSNDAALAGALANQLYLGRTMAFTAELEERLRNATPEAVNAAIRRYMQPGTL      960
961      SRVYAGDFSGAPAQAGTTGSGSGAGAPGSTGNEAAGAAPQAQP                      1003

>MER0253337 - family S33 non-peptidase homologues [S33.UNW] peptidase unit: 5-287 ( active site residue(s): 103,249,277  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015724) 
1        MHVDIRHHHVMLNGFDMHYASCGEPGHPLLLFVHGFPENWQAWHHQLEAFGPHYYAVALD       60
61       TRGINESAGPVDVKGYRAGHMVADILALIDHLGYPQCVLVGHDWGGAIACAVALANPARL      120
121      HGLVMINAVHPAIYRRELVESPAQQAASAYMNFFIGDDALAQICANDFAYLFGMFAEDGQ      180
181      QPEWLDAPTQAGYRHSWSRPGSVRAGLDYYRASPLHPAALGDSGAAGVVFDSAAMTLSVP      240
241      TLVIWGERDRFLLMGCIDGLRQFAPDLRIERIPDGSHWVIHEHGPRVNRLITEFLNDRLD      300
301      TA                                                                302

>MER0253229 - S-formylglutathione hydrolase FrmB ({Escherichi coli}) [S09.940] peptidase unit: 5-279 ( active site residue(s): 148,226,259  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015726) 
1        MIELLSEHMCHGGRQQLYSHTSAATGLPMRFSAYLPPAAAHGPVPALIYLAGLTCNEETF       60
61       VIKAGAQRFAARHGLMLIAPDTSPRGAGIEQASTDSDFGLAASFYVDAVTAPWSRHFRME      120
121      SYIALELPELIESALPVARGRIGIMGHSMGGHGALMLALRHPGRFRSVSALAPIAAPTQC      180
181      PWGRKAFAGYFGGDVAAWADHDASQLMAAASTPYPQGILVDQGMDDPFLASQLHPSSFED      240
241      ACRQARQPLELRRHPGYDHGYFFIMSFIGDHIAHHAAQL                           279

>MER0253474 - GYO_0385 g.p. ({Bacillus subtilis}) [S12.A23] peptidase unit: 66-327 ( active site residue(s): 94,97,189  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015726) 
1        MNRFPRMLAAALLVLGAAQAHAAPAAPSAPAGDGLPTAQPEAVGVDSAKLVALSEWIRRD       60
61       KLDVRSLLVIKDGKLVFERYGDGLSRDYNHELYSVTKFISALLVGTLVGDGKLSAEDTPA      120
121      QRLAAARPDLAPALADKQAIQLRHLMSMSSGLSYKLVEGTDTLYYGVPDRLRVAATAAVR      180
181      TKAGAEFDYIDVNPVLVGATVTQAAGQPEDQYAKARLFGPLGMSHYRWDGADGKGAVSGG      240
241      WGLRLRSIDMAKLGMLMLNEGRWNGQQIVPASWVARMTTPAGPAKDYGFYCWVNNIVQSE      300
301      REFSAMGYKGQFITVLPKQNAVIVMNSIMSTQGGLRDAAYLDLYRRMVNDYVLPALQAGK      360
361      SVKPDAARQAALRKELELARSSQGVPGTALAFNDKPEQ                            398

>MER0372128 - family M20D unassigned peptidases [M20.UPD] peptidase unit: 44-402 ( active site residue(s): 105,162 metal ligand(s): 103,131,163,191,387 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015726) 
1        MSEHAPEIESYLGTTLTASPASPLKHRYCALADTLDSRAELEVIRRNIHQHPELAFDEVR       60
61       TSGLVASLLEAWGYTVTRGVGGTGVVGTLRCGDSGHSVGIRADMDALPIHERTALPYASV      120
121      NAGRMHACGHDGHTAILLGAAKQLARTRNFDGTVHLIFQPAEEIGAGGGAERMLADGLFE      180
181      RFPCDAIFGLHNHPGVEQGSFLFRSGPFMAACDTVTITIRGKGGHAARPHQSVDPILVAG      240
241      SLVMALQSVVARYVDPNETAVVTIGTLHAGHAPNVIPDNARMEISVRSFNPEVRASVENR      300
301      IRQLATSHAEGYGAVAEVDYVRGYPVLVNSERETEFARQVAEELVGADKVVDQAARIAGS      360
361      EDFAYFLQQRPGCFVRLGNGANQPLLHNAGYDFNDDNLTVGAAYWTRLVERYLKR           415

>MER0054796 - HslV component of HslUV peptidase [T01.006] peptidase unit: 7-177 ( active site residue(s): 7  ) (Cupriavidus necator) (Source: UniProt Q476Y4) 
1        MEQYHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGTARKVRRIYNGKVLVGFAGSTADAF       60
61       SLLDRFEAKLEKYQGNLTRAAVDLAKDWRSDRALRRLEAMLITADRDTTLVITGNGDVLD      120
121      PEGGIAAIGSGGAYAQSAAKALVENTEMAPKDVVEKALTIAGELCIYTNTNFVIETLE        178

>MER0376239 - family C44 non-peptidase homologues [C44.UNW] peptidase unit: 2-238 ( active site residue(s): 2  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015726) 
1        MCGIVGAVSTRNIVPVLIEGLRRLEYRGYDSCGVAVVRDDAVERARTVSRVADLDAQTQA       60
61       SGLSGFTGVAHTRWATHGKPDTVNAHPHLSGETIALVHNGIIENYEPLREELRAVGYGFE      120
121      SQTDSEVVAHLIHQAYTYPSSATRGDLFASVRAVTKRLHGAYAIAVFAKDQPGRVVGARA      180
181      GSPLVVALGENEAFLASDALAVAGTANRIIYLEEGDVVEITLDGVTIHDVDDHPVEREAR      240
241      VVEAHAASVELGPYRHFMQKEIFEQPRALGDTLEGIESISPELFGSGAAEVFAGIDSVLI      300
301      LACGTSYYSGCTAKYWLESIARIPTQVEVASEYRYRETVPNPRALVVVISQSGETADTMA      360
361      ALRHARALGHVHTLAVCNVATSAMVRETELRFLTRAGTEIGVASTKAFTTQLAALYMLTL      420
421      ALAKVRGLLTEDAEAKALTNLRHLPVALHGVLALEPQIIAWSEDFARRENALFLGRGLHY      480
481      PIALEGALKLKEISYIHAEAYPAGELKHGPLALVTEAMPVVTVAPNDALLEKLKSNIQEV      540
541      RARGGRLYVFADSDTQIQSSDGIQVIRLPEHYGDLSPILHVVPLQLLAYHTACARGTDVD      600
601      KPRNLAKSVTVE                                                      612

>MER0253005 - family M15 non-peptidase homologues [M15.UNW] peptidase unit: 59-195 (Cupriavidus necator) (Source: EMBL nucleotide NC_015726) 
1        MTDATRKARRRFLHTTGGLALAAGLMPLTPRQALASLPANQALAGLPDARTLAFDHTHTG       60
61       ERVSLVYAVGDRFLPEALTTLNGFLRDHYSGKVGMIDPQLFDLLFQVRRELGTDQPFQVI      120
121      SGYRSPATNSRLRNTRGGGVARHSLHMDGKAIDIRLAGVPLADVRDAAKSLQGGGVGFYE      180
181      SDQFVHIDTGRVRYW                                                   195

>MER0094532 - subfamily A24A unassigned peptidases [A24.UPA] peptidase unit: 15-116 ( active site residue(s): 26,85  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015726) 
1        MQAASALAPLVGPATIGIVLTAAAIDLDRRRIPNWLTFGAWIAALPAMAAIHGLAAGSLA       60
61       WLYGWTVGLTLFLPFYLMRGMAAGDVKLMAAVGAWLGVSMVLKIALATCVIGGIWALIQV      120
121      LVTGQGRSTLARVGHMLIAALVPGSRPVQPEAGASAGSMPYGVAIAAGTLTMLFAST         177

>MER0253352 - family M38 non-peptidase homologues [M38.UNW] peptidase unit: 38-391 ( active site residue(s): 327 metal ligand(s): 82,84,179,222,254 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015726) 
1        MTTNPKTDSLTRAIRGRVLHFLRDPQFHEDAYQYWDDGVLIVTNGRIAAAGDYTQLAARI       60
61       PADVEIVDHRGKLIVPGFIDTHVHYPQTDMIASPSPGLLHWLDTYTFPEERRFADPDYAR      120
121      GVAGFFTEELLRNGTTSAVVWSTVHKASAEALFAESEARNLRMVTGKVMMDRNCPEFLRD      180
181      TAETGARDSADLLSRWHNKGRLAYAITPRFAPTSTEAQLAACGELARAYPDAFIQTHVAE      240
241      NRDEVKWVAELFPDARSYLDVYDRYGLLRPGAMYGHAIYLDQDDRRRLADSGAAVAHCPT      300
301      SNLFLGSGFYDFHQSDANRLNVTLATDVGGGTSFSMFRTMNAAHKVARMGGYYLTALRMF      360
361      YLATRAAAEALGWTDRVGSFGVGCEADFIVLDPKATPLIARRSNRSETLEEELFAFAMLG      420
421      DDRLIDSVYVMGEAAHVPAA                                              440

>MER0253661 - subfamily M14D non-peptidase homologues [M14.UND] peptidase unit: 103-249 ( active site residue(s): 225 metal ligand(s): 0,170,173 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015726) 
1        MPADMHISSQFDSGAIEVEALDRADDIRLRIRADSHADFRQWFHFRLQGAAGQACRMHFL       60
61       NAGDCTYPDGWRDYRAVASYDRANWFRVPTRFDGQVMTVECTPEHDSIWFAYFEPYPDER      120
121      HLSLLASCQRSPLARLSHLGSTVDGRDMTRVTLGQPGPGKKTVWMIARQHPGESMAEWFV      180
181      EGVLQRLTGTGMWAGDPVARKLLERAVFHIVPNMNPDGSARGNLRTNAAGANLNREWMAP      240
241      SPDTSPEVYHVRRAIEASGCDMFFDIHGDEGLPYNFVAGSEMLPGFTEARRREQQRFIEA      300
301      FKRASPDFQDVHGYAASKYNADALKLASKYIGHTFGCLALTLEMPFKDNADLPDPAVGWN      360
361      GARSALLGTAMLQAILDYLG                                              380

>MER0094552 - esterase EstB [S12.950] peptidase unit: 27-403 ( active site residue(s): 86,89,193  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015726) 
1        MSGYSLNKDSAVSLPTIAPRPGVSHVSPLNARIDVVVRQALEQRRLVGAVVLVSRDGEPV       60
61       YQQAAGLADRESGQSMRMDAVFRLASVSKPIVSVAALVLVAQGHLDLDQGIDRWLPEFCP      120
121      RLADGRPARITARQLLSHTAGLGYRFFESGEAGPYARAGVSDGMDDTTISLAENLRRIAS      180
181      VPLLYEPGTAWGYSLATDVLGALIERVHGTPLDTAVRQLVTGPLGMDDTGFVARDAHRVP      240
241      TSYVNDSPHPHRLREGETVPVLEGTVGIPYSPARLFNARAFPSGGAGMAGTAQDFLRLLE      300
301      SLRQGGGVLLPSALVEDMARDQTGGLDLPDAPGTGFGLGFSVLRDPRRAGSPESTGTWRW      360
361      GGAYGHAWFVDRSQGLSVVAFTNTLYEGMSGRFVTDLRDAVYGVAPAAA                 409

>MER0253133 - family S24 unassigned peptidases [S24.UPW] peptidase unit: 68-191 ( active site residue(s): 114,156  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015726) 
1        MLKAQAAIGCSATWLLTGVPPMEAVKPKSGAGQVEAKLNEITSAPAYNPLSMAGDNFEPG       60
61       PDLRPRRYPEISWVQAGMWAELCENFEPDEHTIWHQCHIDLGPCGFVVTVRGPSMTAPAG      120
121      VYPSFPDGIKLFVSPDAEALPGKYVIVRREGKATFKKLTLVEGEMYLEALNPDWPERYQR      180
181      LKEGDQFCGVVRHAGFDL                                                198

>MER0253184 - family S14 unassigned peptidases [S14.UPW] peptidase unit: 217-678 ( active site residue(s): 0,0,0  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015726) 
1        MPTPQTPAAAPVAGERRDLPLMGRSAEVGTVDRDARTVDLVWTTGARVQRYDWWNERYYL       60
61       EELSLDPAHVRMGRLQSGTANLLNTHSSYDLSDVLGVVTAASLDGDQGRASVRFSQRDDV      120
121      QPYFQDVVDGIIRNVSVGYRIYKMERIAPAVDGDPWIYRAIDWEPYELSLVPVPADPGAT      180
181      TRSAEQGRQQRTFACEFFDQSTPAAAGNPTRKEPNMPGENTTTQPAATTTAATQTAPVVD      240
241      QRALDAAREEGARAEAERQTGIREAVRLGGLDGAFADQLIGERSMSAADAGMAVLREQAR      300
301      RSAANPTRSAADIQTTRDETDARRAAMGDAIVLRANPRAFNDAARMDAARQFRGMDLMDM      360
361      ARQAIELGGGNCRGLSKREIAVMALNLDRDMQVRGGMSSTSDFPEILGNTVGRSLRQAYQ      420
421      VQTRTFLPFCRPSTAPDFKQVARTQLSEASALQKVNEGGEYKAISFGDSAEKYSLGKYGG      480
481      IVSITWESLINDDLSAFDRMPMAIAAEAAALEGDIVYGILTGNPNMADGVALFHATHANL      540
541      AGSGAAISEAALSAGRAAMLKQKGLKNRVLNVKPSFLVVGPDKEFEANKFTSANFVAAKS      600
601      VDINPVYNTSLEVIVDARITGNLWHLIAEPGLIDTIEYTYLEGEEGLFTEQRRGFEVDGL      660
661      QIKARHVFAAKAIDWRGLYQNPGA                                          684

>MER0253185 - family S78 unassigned peptidases [S78.UPW] peptidase unit: 70-177 ( active site residue(s): 0,0  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015726) 
1        MPTPQTPAAAPVAGERRDLPLMGRSAEVGTVDRDARTVDLVWTTGARVQRYDWWNERYYL       60
61       EELSLDPAHVRMGRLQSGTANLLNTHSSYDLSDVLGVVTAASLDGDQGRASVRFSQRDDV      120
121      QPYFQDVVDGIIRNVSVGYRIYKMERIAPAVDGDPWIYRAIDWEPYELSLVPVPADPGAT      180
181      TRSAEQGRQQRTFACEFFDQSTPAAAGNPTRKEPNMPGENTTTQPAATTTAATQTAPVVD      240
241      QRALDAAREEGARAEAERQTGIREAVRLGGLDGAFADQLIGERSMSAADAGMAVLREQAR      300
301      RSAANPTRSAADIQTTRDETDARRAAMGDAIVLRANPRAFNDAARMDAARQFRGMDLMDM      360
361      ARQAIELGGGNCRGLSKREIAVMALNLDRDMQVRGGMSSTSDFPEILGNTVGRSLRQAYQ      420
421      VQTRTFLPFCRPSTAPDFKQVARTQLSEASALQKVNEGGEYKAISFGDSAEKYSLGKYGG      480
481      IVSITWESLINDDLSAFDRMPMAIAAEAAALEGDIVYGILTGNPNMADGVALFHATHANL      540
541      AGSGAAISEAALSAGRAAMLKQKGLKNRVLNVKPSFLVVGPDKEFEANKFTSANFVAAKS      600
601      VDINPVYNTSLEVIVDARITGNLWHLIAEPGLIDTIEYTYLEGEEGLFTEQRRGFEVDGL      660
661      QIKARHVFAAKAIDWRGLYQNPGA                                          684

>MER0304063 - family M20D unassigned peptidases [M20.UPD] peptidase unit: 47-453 ( active site residue(s): 123,189 metal ligand(s): 121,157,190,226,428 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015726) 
1        MAVRDSASRPTTRFALAGLALAAGLLCNTAQAQTTPAPISADTLHAQIETRAKAVEKQLI       60
61       AWRRDIHQHPELGNYETRTAKLVADHLRKLGMEVKTGVAKTGVVGVLKGGKPGPVVALRA      120
121      DMDALPVKERVDVPFASKAKGQYLGKEVDVMHACGHDTHVAILMATAEVLAGMKDQLPGT      180
181      VKFIFQPAEESPADFEPNGSNTWGAKQMVSEGVLDNPKVDAIFGLHVSSGIESGKLGWRS      240
241      GPSMAAADQFWIDVKGRQTHGARPWGGIDPIVVASQIVMGLQTIQSRQVNAMLEPSVITV      300
301      GTIHGGNRMNIVPEKVEMMGTVRTYDEGMKKDIHARMKRTTEAIATSAGAEANFRVVELY      360
361      NATINQPALTEKMAPTLQRVAGEGNWMITPKATASEDFSFYQEKVPGLFFNLGVTPKGQD      420
421      VTKAPSNHSPEFYVDEPALINGVRALSSLTVDYMVMAQR                           459

>MER0253166 - phosphoribosylformylglycinamidine synthase [C56.972] peptidase unit: 1102-1218 ( active site residue(s): 1112,1147,1148  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015726) 
1        MAHFSCFPGALALSAFRQQRLLTALRQIDADIESVHGQFLHFVDAQTPLSAEEQSRVAAL       60
61       LTYGAPFADPSDGDRFVVIPRFGTISPWASKATDIAHNCGLTHIHRIERGIEITVICKKG      120
121      LLRGRKTLDADTRAAVAAHLFDRMTETVVASRDDAAGLFQELPAKPLRFIDISAGRSALA      180
181      AANVEMGLALSEDEIDYLVEAYGKLERNPTDVELMMFAQANSEHCRHKIFNATWTIDGVQ      240
241      QDKSLFAMIRNTHQLNPQGSIVAYSDNSAVMEGDVAERWFPRGDYHKYGRHEALTHTLMK      300
301      VETHNHPTAISPFPGASTGAGGEIRDEGATGRGAKPKAGLTGFTVSNLMLPEAVESWEND      360
361      RDAAQPVAHRNPDHKPGVTGKPDRIASPLQIMIDGPLGGAAFNNEFGRANLGGYFRVYEQ      420
421      NVGGTVRGYHKPIMIAGGIGNIDAGHTHKNPLPAGTLLIQLGGPGMRIGMGGGAASSMAT      480
481      GTNTADLDFDSVQRGNPEMERRAQEVINACWQLGDANPILSIHDVGAGGISNAFPELVDG      540
541      ADRGARFDLRQVHLEESGLSPAEIWCNESQERYVLAIAPDSFPQFQAMCQRERSPFAVVG      600
601      IATEEKQLQLVDASVDAALKEHYAVDMPMDVLLGKPPRMHRDVKRVEEALPAVDVTGISL      660
661      EQAVRDVLRHPTVASKSFLISIGDRTVGGMNARDQMVGPWQVPVADVAVTTLDYKGNAGE      720
721      AMTMGERTPLAVINAPASGRMAIGEALTNLAAAPVKDLGKVKLSANWMAACGVEGEDAKL      780
781      YDTVHAVGMELCPALGISIPVGKDSLSMRTKWQDDGVNKEVVAPVSLIISAFAAVDDVNR      840
841      TLTPQLRTDAGDTVLIAVDLGRGKNRMAGSILAQVMQQVGDSAPDVDNAEDLKNFFNVIQ      900
901      RLNREGKLLAYHDRSDGGFMAALAEMAFAGHCGVSLNVDMLALDPQQEQDYGDAKNWAQQ      960
961      IAERRNDQTLRALFSEELGAVVQVRMDDRDTVFAVLREAGLSACSHVVGKPNATDQIEVY     1020
1021     RDAKKVFGASRTDLQRNWSEVSWRISRLRDNPACADSEYDRLLDAADPGISPVLTFDAAE     1080
1081     DIAAPFIAAGARPRVAILREQGVNSQIEMAYSMDRAGFDTHDVHMSDLIAGRANLADFSG     1140
1141     FVACGGFSYGDVLGAGEGWAKTILFNAQMAEQFAAFFNRQDTFALGVCNGCQMMSNLAPI     1200
1201     IPGAGAWPKFTRNQSEQYEARYVTVEVQSSPSIFFAGMEGSRIPIVVAHGEGFADFSQQG     1260
1261     NIDQAHVALRFVDNYGAVTQAYPLNPNGSPDGITSVTTVDGRFTVLMPHPERVFRAATMS     1320
1321     WAPDAWKQVADGGSPWMRMFRNARKWVG                                     1348

>MER0094508 - family S9 unassigned peptidases [S09.UPW] peptidase unit: 128-376 (Cupriavidus necator) (Source: EMBL nucleotide NC_015726) 
1        MTAPTLDITPADALIDAPRRIAITGLRPGETVAVSTRTVRGRDVAWASQADFIAAGDGSV       60
61       DLERDAPVRGSYDGVAPMGLLWAQRPVASDSRELFHTDAIRPLVTEITVTAAGGEARSEL      120
121      VQRLAAPGVVREDIRVDGLVGTLYRPPGAGPHPAVMVLNGSGGGINEPRAALYASHGYAA      180
181      LALGYFKAPGLSDYISNTPLEYFERGLQWMHRELRPAHGFVALSGQSRGGELVLLLGATF      240
241      PDLVSAVVGYVPGAVVHSAQNAADPAIGREGAAWLHHDKPLPHVWENNPDASWAPFDEGP      300
301      APHRHERAILTALKNAEAVARARIRVEHIHGPVMLLSGTDDGSWPSSLYSRMVTDKLTET      360
361      GHPYPVEHLDFEHAGHAILFPYVPTTQAVYAHPVSRRISTTGGTPEANAGADEASWRGVR      420
421      AFLARAVAARKQTAGN                                                  436

>MER0474637 - family M20D unassigned peptidases [M20.UPD] peptidase unit: 74-362 ( active site residue(s): 89,152 metal ligand(s): 87,118,153,177 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015726) 
1        MEPSENMHEIDQEIAERIEAYRPLCSHLSDRLWDFAETAYDEHESVELQVRELETNGFRV       60
61       TRDVAGIPTAFIAEAGSEGPVIGFLGEYDALPQLSQEADATARAPRVAAGNGHGCGHNLL      120
121      GGATLLAALAVKDWLQSTGRPGRVRYYGCPAEEGGAGKVFMTRAGAFDGLDAALTWHPAS      180
181      ILAIDAMATLATIHVRFTFTGVAAHAAAAPHLGRSALDAVTLMNVAANYLREHIPSDARL      240
241      HYAIHDTGGIAPNVVQARAEVVYQLRSPELAVVQSIMERLRKIAQGAAMMTGTSMAYRIE      300
301      RAMSNMRPNNVLSELMYARMQALGPTPFDEADRAFAARMQAAISAEEAKASLQIFGAQRL      360
361      SGVLHEGVLPAVVMPAVLSASTDVGDVSWVVPTARCLGACFALGTPFHSWQLVAQGKASV      420
421      AHKGMTHTAKIMAATAAALFADREALAQAKEEFRQAAAEHPYKCPIPDDVRPPVVKPAAR      480
481      LRGTMRGAFPNQYAGVSA                                                498

>MER0474750 - family M20D unassigned peptidases [M20.UPD] peptidase unit: 16-440 ( active site residue(s): 150 metal ligand(s): 113,115,151,175,406 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015726) 
1        MRAEGQKYTDLVGNVIEARRDAYIALADRIWDLAETRWQEFQSVEAQIELLEREGFRITR       60
61       NLGGLPTAFMAEAGESGPIAGFLGEYDALSNMSQKPGAIEARHLCNGASGHGCGHHLLGV      120
121      GAMLAAVAARDGNARHGRAGIVRYYGCPAEEGGAGKAFMAREGVFDDLDFALTWHPGPFS      180
181      GIFRYKALAVIQAAFRFSGIASHAAASPHLGRSALDAVELMNVGVNFLREHMPQEARVHY      240
241      AITDAGGKAPNVVQEKAEVLYVVRAPDIVGARELFERVRQIAEAAALMTETSVTMEFDRA      300
301      CSDVIRNGVIENLMMRNLEALGSPPFDESDDAFAARLEASFSAEDLRECMASYNGPANAR      360
361      GLWQAPLALAGEPGTLTGSSDVGDVSWIVPTTQYLGACYAVGTLMHTWQLVAQGKLPAAH      420
421      KGMLHAAKVMAATALDMLSHPEWIAEAKAEHRWRTGGRSYISPIPPDVIAAPLRGR          476

>MER0474514 - family M20D unassigned peptidases [M20.UPD] peptidase unit: 28-319 ( active site residue(s): 82,147 metal ligand(s): 80,112,148,172 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015726) 
1        MKHIESVVDLIETKRHQYISLANNIWSFAEMRYAEFRSAELHAAQIEQSGFKVRRGVAGM       60
61       PTAFVAEAGSGGPVIGFLGEYDALAGLSQESGALSCMPAAGAENGNGHGCGHHLLGTAAH      120
121      LAAVVARDYFAANNIGATVRFYGCPAEEAAAGKTFMARDGLFDDLDVALSWHPSVANSVF      180
181      MNATLANVQAYFRFHGKASHAALAPHLGRSALDAAELMNIGVNYLREHMPDQARVHFAYI      240
241      NSGGISTNVIPVLAEVLYTIRSPRSEEAMDLFKRVKDIAEGAALMTGTRLEIVFDKAVSN      300
301      VLHNDTLDHVLDRNMRAIGGFDVSTDETRFATAIQSTIAEEDLANSSRHFAAALRDPRPI      360
361      VPEILPYSPDVVRPVTGSTDVGDVSWVVPTTQCLTACYAFGTGFHSWQMVSQGKLSLAHK      420
421      GMLLAAKTLAATAIDLAGKPETLLQAKEELLRKRGRRPYACPIPPDVLPPPARS            474

>MER0253210 - cephalosporin C acylase precursor [S45.003] peptidase unit: 255-636 ( active site residue(s): 255  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015726) 
1        MRWFGRLARFVVGLLVLAVAGAVGALVWYRHAAQPPASGQEALAGLRGQVAVVRDGHGVP       60
61       HIRAASKADAWFALGYVHAQDRLWQMQMNKRVVAGRLAEILGPSALDTDKFLRTLGVRRN      120
121      AEAILAQASPETRAALQAYADGVNAWIDHRKGPLPPEFLLLRAQPERWEPADTLGWQTMM      180
181      AWDLGGNWTQETLRMRLAQVLPVARISELLAPYPGEQPVRTMDYGHLYKQLAPLANAMAS      240
241      VGDKAPPGYVEGMGSNNWVVSGAHTQSGKPMLANDPHLGLQAPALWYFARMTAPGLDVTG      300
301      ATLPGMPLVVLGHNDRIAWGLTNTAPDVQDLYIERLRPGNDTQYQTPDGWAAFETRTETI      360
361      RVKGAPDVVLKVRATRHGPVISDVAEPLSAAAGPLGAQYVVAFQWTALRPDDRTFQAGLR      420
421      MNEARDWAGFTAALRDFHSPQQNIVYADVDGNIGFYAPGRVPLRRADNDLKGLAPAPGWD      480
481      ARYDWTGFIPFEALPHRYNPADGVIVTANQRIVAPDYPYFITSEWTVPYRFDRIQSLLAA      540
541      TPRHSFDSFAAIQKDVVSLAVRDALPLLLAAPVGRDAARPERERALLEALRKWDGTMDPA      600
601      RAEPLVVTAWLRELSRRLFEEKAGEAIFVRLWEQRNVQQPMLNILRDPRTLGAFWCDRQH      660
661      TRPAETCDDAIADAWTQAMADLSRRYGDDAARWRWGEAHTARSEHKPFGKIAHLSPLFNL      720
721      RVPTGGDTYTVNVGRHNLRDDKAPFENTHAASVRALYDLANLEASRFMDSTGQSGNALLP      780
781      RYRDWTGKWAAVEYVTIPPVPSLPQQAAPDTLILVPAAKK                          820

>MER0094581 - GMP synthase [C26.957] peptidase unit: 1-235 ( active site residue(s): 81,176,178  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015726) 
1        MHDKILILDFGSQVTQLIARRVREAHVYCEIHPNDVSDDFVREFAPKAIILSGSHASTYE       60
61       DHQLRAPQAVWDLGVPVLGICYGMQTMAVQLGGKVEWSDHREFGYAEVRAHGHTNLLKDI      120
121      EDFRTPEGHGMLKVWMSHGDKVAGLPPGFKLMASTPSCPIAGMADEARGYYAVQFHPEVT      180
181      HTAKGRQMLERFVLGIAGCKPDWVMHDHIAEAVAKIREQVGDEEVILGLSGGVDSSVAAA      240
241      LIHRAIGEQLTCVFVDHGLLRLDEGKMVMDMFAGRLHAKVVHIDASDQFLGHLAGVTDPE      300
301      QKRKIIGREFVEVFQAEAKKLTNAKWLAQGTIYPDVVESGGTKTKKATTIKSHHNVGGLP      360
361      ETLGLKLLEPLRDLFKDEVRELGVALGLPPEMVYRHPFPGPGLGVRILGEVKRDYADLLR      420
421      RADAIFIEELRKTIATEQDAAAGLCEPDQVGKSWYDLTSQAFAVFLPVKSVGVMGDGRTY      480
481      DYVVALRAVQTTDFMTAHWAHLPYALLGRCSNRIINEVRGLNRVVYDVSGKPPATIEWE       539

>MER0253197 - DNA repair protein RadA ({Escherichia coli}) [S16.A04] peptidase unit: 182-449 ( active site residue(s): 364,407  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015726) 
1        MAKTKTVYTCTECGGTTPRWAGQCPHCQQWNTLVETVAESAANKRFQPLAASATVRKLSE       60
61       IDAADVPRFSSGIDEFDRVLGGGLVSGGVVLIGGDPGIGKSTLLLQALANLAGQRRVLYV      120
121      SGEESGAQIALRAQRLGVESPSLGLLAEIQLEKIQATLEVEKPEVAVIDSIQTLYSEALN      180
181      SAPGSVAQVRECAAQLTRIAKSSGITIILVGHVTKEGSLAGPRVLEHIVDTVLYFEGDTH      240
241      SSHRLIRAFKNRFGAVNELGVFAMTERGLRGISNPSALFLSQHEETVPGSCVLVTQEGTR      300
301      PLLVEIQALVDTAHVPNPRRLAVGLEQNRLALLLAVLHRHAGIACFDQDVFLNAVGGVKI      360
361      TEPAADLAVLLSIHSSMRNKPLPRGLVVFGEVGLAGEIRPSPRGQERLKEAAKLGFTIAV      420
421      IPKANAPKQKIDGLEVIAVERIEQAIDRVRHLD                                 453

>MER0094589 - family S12 unassigned peptidases [S12.UPW] peptidase unit: 51-396 ( active site residue(s): 105,108,196  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015726) 
1        MGKLQERRHFLGAALGGLLVPALPACGGGNDDPPNPPEPVPESQITQAIAQLDKLAADLM       60
61       ASSRVPGMAVAVVRGNQTVYAKGFGRRLVTDPAPVDADTVFQLASVSKSVGATVVARQVG      120
121      RGGIGWDTPVRAHLPWFALSDAEVTQGVTIGDLYAHRSGLPDHGGDLLEDMGYDRRQVLT      180
181      RLRYLPLHPFHAVYAYTNFGLTAAAEAVATAAGIDWATLSEQAIYQPLGMTRTSSRYADF      240
241      AARDNRALGHVRVNGNWVQGAGRMPDAQSPAGGVSASVNDMAKWLAMLLAKGEFAGQRVV      300
301      DAAALTPALSQQMQSSPPVDGRPAGYYGYGFNVGTTELGLTSYNHSGAFVAGAATNFTAL      360
361      PALNLAIVTLTNAQPIGVPETLSAQFFDLVQYGAIRRDWGKIYGDAFAPLLAPEGRLVGQ      420
421      PRPASPLPARALSAYTGTYQNDYYGPLQVADQGGTLVMTLGATPLVLPLSHWDGDVFTFT      480
481      LENENATPGTISQAAFSSDRVWLEYYEHEGLGMLVR                              516

>MER0376584 - PgpA peptidase [C40.006] peptidase unit: 69-182 ( active site residue(s): 91,143,155  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015726) 
1        MPLRRTRISSHPLRAQGLLAQVRLPLLCATALLLAACASSPPSRHAGLPRTPGKPMIDPS       60
61       AGLEEISIQAMSLVGTPYRYGGNTPDSGFDCSGLVRYVVSRAANVNLPRTTEAMGARGSS      120
121      LDRSEVASGDLVFFNTTGRANSHVGIYVGQNRFVHAPSSGGTVRLEDMGKPYWASRYNGA      180
181      RRVVAAANQPPASVAFPAAPPLPEPAPAPAPLPVDDDPIAAFANQ                     225

>MER0094188 - PgpA peptidase [C40.006] peptidase unit: 76-192 ( active site residue(s): 101,153,165  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015726) 
1        MQRSVLHSLARAAVGIAIACGATVSNGVLADTVFKDADARIDASAQAADSHTEGKRGLLS       60
61       SVVNSTSNVASKAGDLVMNALGLIGVRYRFGGNSPESGLDCSGFVRYVFQDTFGFMLPRR      120
121      SVEISRVGTTVAATDLRPGDLVFFNTMRQTFSHVGIYIGDNKFVHAPSTGSKIRVDDMRA      180
181      AYWVTRYNGARRIEDGKEGGADGLGDMVETLKRYDPKVARASLYGG                    226

>MER0253102 - family C26 unassigned peptidases [C26.UPW] peptidase unit: 213-355 ( active site residue(s): 268,352,354  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015726) 
1        MLPSFPSAILALADGTVFRGYSIGASGHTIGEVVFNTAITGYQEILTDPSYSRQIVTLTY       60
61       PHIGNYGVNPEDVEATKVHAAGLIIKDLPILASNFRKEHTLAHYLKQEKVVAIAGIDTRK      120
121      LTRILREKGAQNGCILAGEDNVQKAIDLARSFPGLAGMDLAKVVSVKEPYEWTQTEWKLG      180
181      EGYGKQDKPQFHVVAYDYGVKYNILRMLAERGCKVTVLPAQASAADALALNPDGVFLSNG      240
241      PGDPEPCDYAIAATREFIERGIPTFGICLGHQIMALAVGAKTLKMKFGHHGANHPVKDLD      300
301      DGRVVITSQNHGFAVDADTLPSNVRVTHKSLFDGSLQGFTLTDKPAFCFQGHPEASPGPN      360
361      DVAYLFDRFIKLMTDARK                                                378

>MER0094604 - family C39 unassigned peptidases [C39.UPW] peptidase unit: 319-460 ( active site residue(s): 331,337,410,426  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015726) 
1        MSSKPASESGQAGDRAAAAAPDQPEAGSALVAFLASVEILSVLTPEELARLAEAAQVLTF       60
61       GFGDTVCNAGEAAPGLFVVKSGSVRVFNEEHGKEISMGVRKAGEVFADIALLRDYRHESS      120
121      VRASGKTELLMIPRSVGEPVVAGNPAALAFITSYVAISSAGGFVARLFDLRGKLDKQELE      180
181      DAVRSVGVKRVAAGKEILKQDGREDRRLYVVRQGTVRIVRSEEGSEFPLATLGQGDIFGE      240
241      RACVMRQEQLASAIAETDVRLLVIPEKTVQLILERNPRLREVLEERIRVLDRELHRQKKL      300
301      AERRKRPVLLDLHSKPELGEKLIRRFALVEQAEEMDCGAACLAMICRHYGIPMTLGKLRE      360
361      LANVTTHGATLDSLARAGESLGFTTRGVQCTRDSLMGFELPFIVHWEGYHYVVVYGISSR      420
421      WVWVADPAIGFRKMSAEEFERGWSGTCLLFRPGESMTQLSVSRSPWLRFIGYLAPYRKIL      480
481      AHLFLATFVIQMLGVVPPLIIQNILDGVVVHQNVGLLHLLIVGLIISSVFSQLMATIRAY      540
541      LANFMVRNMDFAMMSHFFKHTLALPLSFFAKRKTGDIFARFQENQTIRAFLTESTVTTAL      600
601      NMLMVFIYFTIMFLYNVKLTLLLIAFVIPIAALTVVVTPKVKTYAREVFSASTDAKAYLM      660
661      ETLGGAETVKGMGIERPVRLRWERKYAKALDAQYRAQAFHILVGLVSQLLNAATTIAVLW      720
721      VGATLVLERELTIGQLIAFNAFMGSVLAPLMGLVALWGQLNDAAVAMERLGDVLDLEPEQ      780
781      KPQDVLSRVMLPDLQGEIVMKDLYFRYGGEDTPYVLENISFAIRPGEMVAIVGRSGSGKT      840
841      TLAKLLVGFYKPTEGSMSVDGYDLNVIDAAFYRAQVGYVMQSNLLFSGTIAENIACGDDS      900
901      PDRRRIEEVARMADAHAFISKLPLGYEQVVGERGIGLSGGQIQRLCIARALYHDPRLLVF      960
961      DEATSALDTQSESNILANMQEILRGRTAVIIAHRLSTIMQADKILVLYEGAIVEQGRHEE     1020
1021     LIERKGMYFQLVQKQLSAA                                              1039

>MER0253447 - family S9 non-peptidase homologues [S09.UNW] peptidase unit: 57-301 (Cupriavidus necator) (Source: EMBL nucleotide NC_015726) 
1        MTNQASLARLASLPSQDPGFYDREYNNRANVPDNAVHMARWAQWSAGVRARSPYLADLSY       60
61       AGEDSRHAQGETLDYFPAQRANGALPPLLVFVHGGYYRALDKHDHSFAASALPALGVAVA      120
121      VVNYTLVPAVTVPEIVRQVLRSVAWLYRQADRLGHDPDKLFLAGHSVGGHLVAMLMAARW      180
181      PQLGADLPADLVKGGLSVSGLYDMEPLRRAAFLQRDLRFSEDDVARLSPAYMPPASGAPL      240
241      AIAVGELEAAEYHRQHALIRAAWPAKVAHPAASDLVLPDCHHFNVLDSFASPDGALTRAV      300
301      LRLMER                                                            306

>MER0253634 - family M38 unassigned peptidases [M38.UPW] peptidase unit: 72-400 ( active site residue(s): 325 metal ligand(s): 80,82,168,209,252 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015726) 
1        MTLTSRSSTLSAPSADGVWHNCHLLPDADPANAIRDAALVVEHGRIAWLGAAADLPDAYR       60
61       GAARHDSHGAWITPGLVDCHTHLVYGGQRADEFAMRLAGAGYEEIARAGGGIVSTVRATR      120
121      AADEDTLFAQAAARLQPLLAEGVTAIEIKSGYGLNLEAERKQLRVARRLGEHFGISVYTT      180
181      FLGAHALPPEYAGRADDYIDLVCNTMLPALAGEGLVDTVDAFCESIGFSIAQTERVFEAA      240
241      ARHGLRVKLHAEQLSNLGGAALAARHRALSADHLEHLDEAGVAAMAEAGTVAVLLPGAYY      300
301      FLRDTNLPPIALLRQYGVPMAISTDHNPGTSPVTSLLLMMNMACTLFRLTVPEALAGVTL      360
361      HAARALGASDRHGRLEAGRVADFALWRIDSPAELAYWFGRNPVATVVRQGRVHAHEGASA      420

>MER0094517 - family M38 non-peptidase homologues [M38.UNW] peptidase unit: 7-401 ( active site residue(s): 317 metal ligand(s): 60,62,153,201,241 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015726) 
1        MKQFDLIIRNGTVVTASDTMQCDIGIAGGRIVQLGLDLGEAAQTIDASGKLVLPGGVDAH       60
61       CHLDQPMPDGLKMADGFRTGSVSAACGGTTTVIPFAAQEKGHSLRAAVTDYHQRAGGQAV      120
121      VDYAFHLIVSDPTEAVLNDELPGLIREGYSSFKIYMTYDDLKLNDREILEVLSVARQEGG      180
181      LVMVHAENSDCIAWLTEKLGAAGNTAPKFHALARPMAIEREATHRAITFSELVDVPILIV      240
241      HVSGKEAVEQIRWARNRGMKIFAETCPQYLFLTAEDLDQPGYHGAKCVCSPPPRDRGNQE      300
301      VIWDGLADGLFTIFSSDHAPFRYEDAQGKKPGGKEVPFQYIPNGIPGLETRLPLLFSAGV      360
361      VGGRISVNQFVALTSTNPAKLYGLHPRKGTIAIGADADLAIWDPQREVTIRNADLHHAVD      420
421      YTPYEGVRVTGWPVTTLVRGKVVAHEGEVLAEAGHGQFLPCGLPEMARPRYRTSGGSL        478

>MER0317529 - family M81 unassigned peptidases [M81.UPW] peptidase unit: 8-476 (Cupriavidus necator) (Source: EMBL nucleotide NC_015726) 
1        MTSDQLPVRIAVAGLIHETNTYAAEFAGMTPLRAFEQHRGNEILAAFDKSNHQVGGFIEG       60
61       ARRSGATLIPTYVGQATPSGTIEAGAYAAMKHEILDGIRATLPVDGVLLALHGAGVADGT      120
121      EDVEGDLALAVRALVGPGVPIAAVYDLHGNMTDAMRDACDLTLPCKLYPHTDFHDRGVEA      180
181      VELLLEMIRGGLTPVTATRRLPMLPYIATTQEGFIPAEVNDVCRKLAAQPGVIDCSWFHG      240
241      FPYADIAAPCPAVVCTTTGDAALAQRCADEVAQWIWSHREAFRPTFPPPAQGVALALSAA      300
301      EGPVVVNEYADNPGGGTPGDGTHLLRALLDANPPAGTCCFASINDAAVVAQAQRAGVGAT      360
361      IRVSLGGKQGRFQGTPIEADAYVKCITDGRFVNRPGAMFEGVRFDLGAMCRLIIHGVDVI      420
421      VASRAEQIYDVEPFALHGLDVTGYKLIAIKGANHFRAGYRTVAKQIISVDSEGLSTAAIA      480
481      SFPRERLVGEFWPLWDEVQFDGGADVA                                       507

>MER0371539 - family M20D unassigned peptidases [M20.UPD] peptidase unit: 6-394 ( active site residue(s): 78,135 metal ligand(s): 76,104,136,162,368 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015726) 
1        MKLIPEILQAQAEIRAIRRDIHAHPELCFEEQRTADVVAQNLESWGIEVHRGLGTTGLVG       60
61       VIRNGNSPRTIGLRADMDALPLQEANTFDHRSQHSGKMHACGHDGHTAMLLGAARYLAQH      120
121      KPFDGSVHLIFQPAEEGGGGAREMIKDGLFERFPCDAVFGVHNWPGMPVGTFGTRAGPLM      180
181      ASSNEFRIVVRGKGAHAAMPNNGNDPVFTAAQIVSALQGIITRNKRPIDTAVISVTQFHA      240
241      GDATNIVPDQAWIGGTVRTFTVPVLDLIERRMEEVARAVAAAFDCTIEYEFHRNYPPTVN      300
301      SEAETGFATEVAAELVGPDNVDSNVEPTMGAEDFSFMLQHKPGCYLFLGNGDGGHRDAGH      360
361      GIGPCMLHNPSYDFNDELLPVGSTFFVRLVEKWLAPA                             397

>MER0253684 - HtpX peptidase [M48.002] peptidase unit: 84-288 ( active site residue(s): 145 metal ligand(s): 144,148,224 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015726) 
1        MKRVLLFLATNLAVMLVLSITASVLGVNRFLTANGLNLGTLLAFAALMGFGGAFISLLMS       60
61       KTIAKWSTGAQVITHPSTSTELWLVQTVEKLAQRAGLPMPEVAIYDGEPNAFATGATRNS      120
121      SLVAVSTGLLQSMSHEEVEAVLAHEVAHVANGDMVTLTLIQGVVNTFVIFLARVVGYFVD      180
181      SMLRKNDEESSGPGIGYMVTVVICEIVFGILASIIVAWFSRRREFRADAGAAGMMGTPTP      240
241      MVAALRRLGGLEPDGLPQNMQAMGIAGGKSWMALFSSHPPIEQRIAALQSAR              292

>MER0253570 - brefeldin A esterase [S09.951] peptidase unit: 56-309 ( active site residue(s): 157,256,286  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015726) 
1        MAIDPQLLAYYRRLAERYANAPAPADIPAQRARFAEIAAASLLPDPPGITVQDLELALAG       60
61       RTLGARLFRPAGKTAPRLVVYFHGGGWVIGSAQTHHTVAALLAADTGCAVASVDYRLAPE      120
121      HAFPAPCDDAVEAVQWFTGQRQALGLATDFVAVAGDSAGGHLAAQAAQQLNSGGAARVDA      180
181      QLLIYPVTAPVLSTESYRAFADGPGLTRDEMAWFWAHFIGGKALAQGAAHPDPRVYLMAA      240
241      PPVRPPATVLMVAAHDVLRDDGLAYADFLVRHDAPVITIEAGGMTHGFARLQPDAERARE      300
301      WMRRAAAAFAGMIDDV                                                  316

>MER0253095 - family S15 non-peptidase homologues [S15.UNW] peptidase unit: 86-519 ( active site residue(s): 138,266,298  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015727) 
1        MQIDWDVEIPMDDGLVVRADVFRPKEEGRYPVLMSYGPYAKGLPFQVGFPAQWQSLTTKH       60
61       PEILKGSSGKYANWETADPERWVPLGYICIRVDSRGAGRSPGVIDCFSPREAQDFYDCIE      120
121      WAAKQPWSNGKIGLAGVSYYGATQWLVAAKRPPHLAAICPFEGFSDYYRDACRHGGILNT      180
181      FMVAWYPKQVENVQHGLGRRGHVNPNTGLPISGPAELSDEELLANRVDINATQLSAELIS      240
241      DSYFDGRRADLGAIEVPVLSCANWGGHGLHLRGNVQGYLGAGSKHKWLELHGLEHWTEFY      300
301      TDYGVALQKRFFDHFLKGEDNGWDRQPPIKMQVRHVDRFVERDEHEWPLARTAWTPMYLD      360
361      AGAQSLRSEPSVTASRVSFDGMAGKVSFSTAPFERETEVTGPLSATLWISTTARDADLFL      420
421      TLRAFAPDGKEHLILGAVEPNAPLAQGWLRASHRKLDPQASRPYQPVHTHQEIQLLEPNE      480
481      IYELQVEIWPMCFVFQKGYRLVLTVGSSDFEHDLPGPYPQIYGKSMRGSSVLLHDHPDDR      540
541      RSDRFAGQTTVHTGEKYASFLLLPVIPATC                                    570

>MER0094564 - subfamily M20C non-peptidase homologues [M20.UNC] peptidase unit: 9-415 ( active site residue(s): 91,134 metal ligand(s): 89,100,135,165,388 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015727) 
1        MSTFDNTQSLAINGQRLWQSLMDLARIGATPKGGNARLALTALDGQGRDLVVGWMKDAGL       60
61       EIHVDQIGNIFGRRAGRNNALPPVMTGSHIDTQPTGGKFDGCYGVMAGLEVMRTLQERGV      120
121      QTEAPLELIIWTNEEGSRFLPVMMGSGVFTGRFTLDTALNARDSAGLSVRDELAAIGYAG      180
181      TEPVSERPVGAYFEAHIEQGPVLEAQNKVIGAVTGSLGVRWYDVTVTGMEMHAGPTPMPV      240
241      RKDALVAACEMVQTVIGIANDNLPHGRGTVGVLNVHPSSRNVVPGRVDFTVDLRHIYAET      300
301      LSAMDRHLRESFATIAQRHDVELDLRLAQYNMPTPFAPELVDSVRESAVRRGLSTMDIVT      360
361      GAGHDAVHMAMAHPTAMIFVPCKDGVSHNEIEDAQPAHLEAGCNVLLDAMLARAGVAA        418

>MER0253548 - pyroglutamyl-peptidase I (prokaryote) [C15.001] peptidase unit: 1-215 ( active site residue(s): 80,143,167  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015727) 
1        MATVLVTGIEPFDGETINPSWEAARRLDGETIDGAAIAARQLPCVIGKVNGVLHDAIEET       60
61       SPDVVICLGQAGGRSDISVERVGINIVDARIPDNDGHQPVDEPVVPGGPAAYFSTLPIKA      120
121      VVAALRAHGIPASVSQTAGTYNCNAILYGLSHYIARHRPAMRGGFIHVPYLPEMAARHPG      180
181      APSLALDTLVAAVRVIVATSLAVREDVRVSAGALH                               215

>MER0385614 - family C56 non-peptidase homologues [C56.UNW] peptidase unit: 47-156 ( active site residue(s): 82,108,109  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015727) 
1        MQKIPADRHLKIGGLIFPNMDQCDFTGPFEALSRIPNSTFHTLWKNKEIVRDMRGMQLVA       60
61       DTSFDEAPQLDVLLVPGGYGQEEAAADETVLAFIRQQAEHALYVYSVCTGALLCGAAGLL      120
121      HGRRATTHWTAMEVLPLYGAVPSEERVVIDGNYVSAGGVTSGIDGSLVLASLLRGERLAK      180
181      ELQLYMAYDPQPPFDAGSPATAPSDILSTVRARASQITEQRLASARQYAERALDLA          236

>MER0253649 - family M20 unassigned peptidases [M20.UPW] peptidase unit: 13-414 (Cupriavidus necator) (Source: EMBL nucleotide NC_015727) 
1        MSPDLNVERSARIDLPRLLRRIAMLGEVGAIEGGGVCRLALTDEDRAGRDLVMSWMRELG       60
61       LAVSIDGIGNVVGVRAGREDLPPVMTGSHIDTVRTGGRYDGNLGVLAGLEVMAALDDAGI      120
121      VTRRPLAVAFFTNEEGARFAPDMMGSLVFQGDLPLQQALDTRGIDGTTVGENLARIGYAG      180
181      PAPVGQNRVHAFVELHVEQGPVLEHEDVTIGAVTGVQGIHWSEFTVDGTSNHAGTTPMRL      240
241      RHDAGLVAARVAGFVRDLSRELGGAQLATVGQVQCFPNLVNVIPNRAVFTVDLRNTDGAV      300
301      LADAVQRTLAYAQEVAKAEGVRLSHRALADFAPVAFDAAMVDRVEAIARRHGHSVRRMPS      360
361      GAGHDAQMLARMCPAGMIFVPSVAGLSHNVAELTHDRDIQAGADVLLDLMLELAA           415

>MER0487044 - subfamily M24B non-peptidase homologues [M24.UNB] peptidase unit: 138-192 ( active site residue(s): 0,0,0 metal ligand(s): 0,0,0,0,0 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015727) 
1        MDKPVFDYAARWQRAAALMEQQDVDALLLMKPANLAYFTGDGRPCALALLTRTLHCVVAV       60
61       PACDLASIRRTSVATELRSFQSEVEMFHGFRDVLKELDLTQATIAIEKNFFDAALYDVFV      120
121      AHILPKAHVVSATPIVSQLRMLKDVAEMASIKAAAKVADSGMDAVSRALRPGIREIEIAG      180
181      EAEFAMRKAGAE                                                      192

>MER0253627 - S-formylglutathione hydrolase FrmB ({Escherichi coli}) [S09.940] peptidase unit: 5-289 ( active site residue(s): 157,236,269  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015727) 
1        MLELISEHCCHGGSQRVYRHQSETIGLPMRFSVFLPAQVLRQWAGEGEPIRRFPALIYLA       60
61       GLTCNEDTFMTKAGAQRLAAARGLILVAPDTSPRDAGIQAESTSWDFGVGAGFYVDATED      120
121      PWSVHWRMESYVVRELFGILTTVLPADANRVGIFGHSMGGHGALVLAQRHPRRFRSVSAF      180
181      APICAPVQSPWGEKAFTGYLGPERNTWGAYDASALMRRQSRPPYPEGILVDQGLADKFLQ      240
241      EQLKPEIFQQACESVLQPLILRRHEGYDHGYFFITTFIEDHIHFHASILAGAMRPLLTGG      300
301      LQVRHDTPRPVHPPRH                                                  316

>MER0253090 - family S33 non-peptidase homologues [S33.UNW] peptidase unit: 62-353 ( active site residue(s): 174,316,342  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015727) 
1        MASLLKPETSPSTPVPVDHLPAWPNYRHVLLSLAMSERSTSSAARENLMNNPLIQSMKRA       60
61       AGYGSVHDVPQLAAGFTDVFESYLVPAGGLTLHAVVGGQGTPLLLLGGWPQNWFAWRYLM      120
121      LPLARSFTVIAVDPRGVGLSDKPATGYDSKTLAADMFALMDALGFERFAMVGHDIGMWTG      180
181      FAMAYDQPGRIERIALGEALIPGVSDSPPLLSDERWLSDFLWHFNFNRAREVNERLVEGR      240
241      ESIYFGHQFATKAGSPDAVPAYARAFYIEQLRRDPHALRASFDYYRAIDESIPQNRERAR      300
301      SAKLTLPVLAFAGELACGGSVEAELRTVADNVQSVIIAGSGHYPAEEKPEAMLEALQAFL      360
361      APYADAKIICGTS                                                     373

>MER0253508 - TraF peptidase [S26.014] peptidase unit: 24-186 ( active site residue(s): 49,103  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_015727) 
1        MTAGTARHPRSRLRARIVVAGFSILGLAALAWASLASPLPRLTYNPSASMAVGWYRIDPT       60
61       FNRGDLQHGAVRVGRIVLVQLPIEAAALAAQRGYLPADVPLLKRVGAVAPQHICMVGRSV      120
121      RIDDVLVAAALSADRMGRPLPSWQQCRRLVSGEVFLLSTTDPASFDSRYFGPVAASAVIG      180
181      VAHTVWSETGR                                                       191

>MER0163256 - family C56 non-peptidase homologues [C56.UNW] peptidase unit: 10-180 ( active site residue(s): 79,105,106  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_007336) 
1        MSSSPKRVCLILFNGFQILDVCGPMQVFSSTNELLARRGRERAYDIELRGAPGGLIASSC       60
61       GARMEARDLARARRPIHTILIPGGPGVWEGAAHETLVKWLNAAAKRASRVASVCTGAFVL      120
121      ARTGLLDGRQAVTHWDLCERFSAEFPGIAVQPDAIYCRQDRIWTSAGVTAGIDMALAMVE      180
181      EDLDREIAMAVAKTLVVFYKRPGGQSQFSSALLEQSSPDARIKTLHRWVGAHLRERLDVA      240
241      TLAERLSMTPRTFARFYHAQTKLTPARAIEKIRLEQACRLIETRSQSMKMIAQACGFSSE      300
301      EVMRRAFLRILRVSPADYRDRFFTA                                         325

>MER0172938 - family C56 non-peptidase homologues [C56.UNW] peptidase unit: 7-158 ( active site residue(s): 73,99,100  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_007336) 
1        MKIGMLVFPDITATDYVAPADLLARMPGVQLQLLWKHTDTIATELGWRFSATTALRDCGD       60
61       LDMVIVPGGPGLIGLLDDAEVLDFLATRGRTARWVVGICTGPLLLGAAGLLDGYRATCHW      120
121      GSRELLELVNAIPVDARVVVDRNRITGAGVTSGIDCALEAISLAGGASLAKSIQLFAEYD      180
181      PQPPFDCGSPAKAPADILDSAMAALKPFVEARRSLLTKRRAELARTLS                  228

>MER0419949 - esterase EstB [S12.950] peptidase unit: 48-397 ( active site residue(s): 90,93,201  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_007336) 
1        MAQGRSRFLNSAVALAALPVAGCRSSSVDTAALKANADPVLIRAVASGHTAGVAAAVITR       60
61       DETLYTAAQGARTLGASAAMDLDTVMLIASMTKPITSAAAMQMVEQGKLSLDGPAAAVIP      120
121      ELGVLKVLEGWDTNGAPQLRDAEGQLTLRHLLTHTSGFTYEIWNADLERFYRTQNTPGIL      180
181      TGQKAALRVPLCFDPGARWEYGIGIDWVGQLVEAASGLRLGDYFQRNITGPLGMDSTAFK      240
241      ISTTMRTRLAGMHLRGDDGKLSVIDLGTVKDPEFESGGAGLYSTANDYLKFMRMILNAGR      300
301      GNGNQILKPETVALMSRNAMGALSVSKLPTQNPFFSRDVEFFPGVPKTWGLGFMINESAA      360
361      PTGRSAGSLAWAGLANTYFWIDPTLNIAGLAMMQSLPSVDPKTVDVFYGFEESVYGSLS       419

>MER0172976 - family C56 non-peptidase homologues [C56.UNW] peptidase unit: 51-206 ( active site residue(s): 119,146,147  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_007347) 
1        MLTHTAHALRRPAMKVLIVLTSHDQLGNTGEKTGFWLEELAAPYYVLKDAGVNVTLASVK       60
61       GGQPPLDPKSNDPSFQTTATRRFEDDADAKAALSSTQKLSDVSAGDYDAVFYPGGHGPMW      120
121      DLAEDADSKALIEATFASGKPVALVCHAPGVLRHVKAQDGSPLVKGKNVTGFTNSEEEAV      180
181      GLTEVVPFLVEDMLKANGANYSKAGDWQPYVVTDGLLITGQNPASSDPAANALLTMLKHR      240
241      GGGKG                                                             245

>MER0420432 - family S12 non-peptidase homologues [S12.UNW] peptidase unit: 22-410 ( active site residue(s): 80,83,200  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_007348) 
1        MPLTRALEHAASPEQVGLSTRRLQSISSVIHADVDRRKIPGAVVLVARKGRIAWSEAFGF       60
61       EQADTPSRPMQRHSVFRIAAMTRPIVGVAALILMEEGRLSLNDPVERYIPEFASLQVGVE      120
121      SVDANTGERRLALEPVRRAMTVHDLFRHTSGLTYGQFGDSLVQRQYRESGLMDPAQTNAE      180
181      MVAKLAAIPLQCQPGEVFEYGMSTDVLGRIIEIVSGMDLARFVAERVTQPLRMHATGFHL      240
241      IRQDGAGLALQSGASGKSTALFDYDEHHPPRWHSGGAGLLSTAGDYARFCQMLLNGGALD      300
301      GVRLLSRKTVELMLGNHLPQSTRFGGSTTGLGINAPLPDLGQGHGLAVGVRTASGLSPVP      360
361      GSIGDFYWGGALGTYFWADPQEQLIAILMLQENDLATRTGYRSLLRNIVYAALED           415

>MER0420419 - esterase EstB [S12.950] peptidase unit: 15-407 ( active site residue(s): 71,74,188  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_007348) 
1        MQGRETQGMSRERLARIERFIDESYVANGKLPGALVQVWRRGELALNSVLGVADRERQVP       60
61       LAEDSIFRIYSMTKPVTSVAIMMLVEQCKIALDDPVSKYIPAWEKLGVHAGGFMESFQTK      120
121      PAARPMLVVDLLRHTSGLTYGFQQNTNVDAAYRKLKLGELATEGTLDEMIDKLAGLPLEF      180
181      SPGEAWNYSVSTDVLGYLVGKVSGIPFDTFLKERIFEPLGMVDTGFHVPEDKVARFCACY      240
241      AIGVLGSKVISNKGPMLQDDPRASPYLKPPSFISGGGGLVSTAADYMRFARMLLQGGELD      300
301      GVRLLGPKTLKLMTANHLPGGVDLPAMSRSMFSEATYDGVGFGLGFATTVTPASTLIPGS      360
361      AGDFFWGGAASTFFWVDPQEDLIGLFLTQLLPSSAYPVRRQLRTLVYSAITEPGAAPR        418

>MER0092105 - family M20D unassigned peptidases [M20.UPD] peptidase unit: 27-414 ( active site residue(s): 105,162 metal ligand(s): 103,131,163,387 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MSEHAPEIESYLGTTLTASPTSPLKHRYCALADTLDSRAELEVIRRNIHQHPELAFDEVR       60
61       TSGLVASLLETWGYTVTRGVGGTGVVGTLRCGDSGHSVGIRADMDALPIHERTALPYASV      120
121      NAGRMHACGHDGHTAILLGAAKQLARTRNFDGTVHLIFQPAEEIGAGGGAERMLADGLFE      180
181      RFPCDAIFGLHNHPGVEQGTFLFRSGPFMAACDTVTITIRGKGGHAARPHQSVDPILVAG      240
241      SLVMALQSVVARYVDPNETAVVTIGTLHAGHAPNVIPDNARMEISVRSFNPEVRASVENR      300
301      IRQLATSHAEGYGAVAEVDYVRGYPVLVNSERETEFARQVAEELVGAGKVVDQAARIAGS      360
361      EDFAYFLQQRPGCFVRLGNGANQPLLHNAGYDFNDENLTVGAAYWTRLVERYLAS           415

>MER0094094 - pyroglutamyl-peptidase I (prokaryote) [C15.001] peptidase unit: 2-216 ( active site residue(s): 80,143,168  ) (Cupriavidus necator) (Source: UniProt Q0KFE0) 
1        MRTVLLTGFEPFENEPINPSWEAVRALDGERVGDAVIVARQLPCVFGAAIDTIGELVDVL       60
61       RPALVIAVGQAGGRAEMSVERVAINVDDARIADNAGAQPIDTAIVAGGPAAYFATLPIKA      120
121      MVRDMRAAGVPASVSQTAGTFVCNHVFYGLMHRLSQQPDGDVRGGFIHIPYLPEQAARHP      180
181      GQPSLAQETLVKGLRAAVATALSTRADVREQGGQLH                              216

>MER0094509 - family S33 unassigned peptidases [S33.UPW] peptidase unit: 8-260 ( active site residue(s): 103,222,250  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MTVATPPAETHRIHAEGADLHVRVDGADGPWVILAHALAADHTLWDATAQHLARRYRVVR       60
61       PDMRGHGASDAPLGPYTMTRLADDVVAVMDALQIPQAHFCGISVGGMIGQTMGLRHPERL      120
121      LSLALVATNSQTPMEAHPMWHNRIGQAEAHGMAGMADATLGRWLTPAFHEAHRDQVSRIR      180
181      DSLVATPVRGYVGVAGAIMAFDLAGALSRIHCPTLVVAGEQDQGATVAMAQSIAAAIPGA      240
241      RLEVVPQAAHLVHVEQPERFHAALDAFLGNAACGGQCDVP                          280

>MER0212944 - family S33 non-peptidase homologues [S33.UNW] peptidase unit: 5-291 ( active site residue(s): 112,252,280  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MLNDASALLFPNFEPFRQRVGEVEIAGVRGGSGPPLLLLHGHPQSHLIWHRVAPALADHF       60
61       TVIATDLRGYGSSSAPPGNAGHEHYSKRTMAQDQVSLMTAFGFERFALCGHDRGARVAHR      120
121      LCMDHPDAVSRAMLLDIAPTLAMYERTSMAFAAAYWHWFFLIQPAPFPETLINAEPDFYI      180
181      EKLMGLRHAGLTPFAPDAMAAYTAAMRDPARVHAMCEDYRAAATIDLEHDRADREAGRRL      240
241      ALPLRVLWGEHGVVARCFEPLALWQEVATDISGQALPCGHYIPEEAAEPLLEEMLGFFR       299

>MER0094512 - family S33 unassigned peptidases [S33.UPW] peptidase unit: 15-393 ( active site residue(s): 168,333,366  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MTDVALPTAAPAAFDLPPDSVGVVAPQRMHFAEPLKLRNGSSIAGYDLMVETYGTLNAAR       60
61       SNAVLVCHALNASHHVAGVYAEDPRDVGWWDNMVGPGKPLDTNRFFVIGVNNLGSCFGST      120
121      GPMSLNPATGAPYGAAFPVVTVEDWVNAQALVADAFGITQFAAVMGGSLGGMQAVAWSLL      180
181      YPERLRHCIVVASTPKLSAQNIAFNEVARSAILSDPDFHGGNYYAHGVKPKRGLRVARMI      240
241      GHITYLSDEDMAEKFGRELKTDDIRFSFDVEFQVESYLRYQGDKFAEYFDANTYLLITRA      300
301      LDYFDPALAFGGDLTRAMAQTQASFLVASFGTDWRFAPSRSRELVKALLDNKRPVSYAEI      360
361      DAPHGHDAFLLDDPRYHNLMRAYYDRIAEEIGA                                 393

>MER0094513 - Oma1 peptidase [M48.018] peptidase unit: 19-279 ( active site residue(s): 162 metal ligand(s): 161,165,218 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MLRRLQGVQRPTRDRLVRALALAAVAAPMAWCLPAQAQDSEAGGIRLDRSGSAVRKIVPV       60
61       EAIEQQAAQEYEQLKQEAIAKHALAAADNPQLVRLRTIGKRLLPQTARWNERARQWQWEI      120
121      NLIGSRQVNAFCMPGGKIAFYTGLLDQLKLTDDEIAMAMGHEIAHALQEHARERAAKSEI      180
181      TNLGANVISQLFGFGNLGNMALGTGAHLLTLRFSRADESEADLIGMDIAARAGYDPRAAV      240
241      SLWQKMGKVSQSGTEFLSTHPSGRSRIADLEKHLPEVLPLYARASNTTVEKLPPYRANMA      300
301      GLGGAPVDSGDDDRQKPLQR                                              320

>MER0094516 - subfamily S9C unassigned peptidases [S09.UPC] peptidase unit: 5-211 ( active site residue(s): 117,167,194  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MNAHTQVLSIAGPAGAIDLSVDLPQGEPRGLALVAHPHPLFGGTKDNKVAQTLARSFVQL       60
61       GYATVRPNFRGVGGSAGEHDNGIAEQDDLLAVVAWMRQQTAWSAQAATLPLAMGGFSFGS      120
121      FVTTHVARRLAEAGTPAQRLVLVGTAASRWQVAEVPADTIVIHGEQDDTVPLASVFDWAR      180
181      PQELPVIVIPGADHFFHRKLHLIKQLVVNAWDR                                 213

>MER0350819 - family S11 unassigned peptidases [S11.UPW] peptidase unit: 41-385 ( active site residue(s): 70,73,132  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MLNRATTRLSSAFAPAAIAAAIVLAAAPAAVLAQGVPMPQVAAKSWMLYDVTSGQALASQ       60
61       NADARIEPASLTKLMTAYLAFEALKEKRLTLDQAVVPTSVVLKVKSDESRMFIEPNKPVT      120
121      VQDLLLGLIVQSGNDAALALAEAVGGSEEGFVAMMNREAQRMGMKNTHFTNTDGIPDPNH      180
181      YTTAVDLATLTTRLIKDFPEYYAMYSQKEFTYNKIRQPNRNRLLYIDPTVDGVKTGHTKS      240
241      AGYCLISSAKRPLANVPDGSRRLISIVIGTTTEQVRTQESLKILNYGFQFFDTLRLYDKG      300
301      QVLATPDIYKGKSGTVKIGVQNETFVTVPKGTGGRLKPVLERQELLIAPISAGQQVGMVK      360
361      LMDGTNKVAEFPVVALEEVPEAGFFGRLWDTIRLWFKRK                           399

>MER0094519 - C-terminal processing peptidase-3 [S41.004] peptidase unit: 181-378 ( active site residue(s): 314,339  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MRKTLKNISLVSVGLVAGVLATLQISATAQNSSGPLPLDQLRLMADIFGQIKREYVEPVD       60
61       DKKLLTEAIKGMVASLDPHSSYLDEKDFKELQEGTRGRFAGLGIEISQEEGLVKVINPIE      120
121      DTPAFRAGIQPGDLITRIDDKPVRGLPLEQAVKRMRGEPGTKVTLTIYRKSEERTFPVSI      180
181      TRAEIRVQSVKAKMLDNNIGWIRLTSFQERTIADLSRKLAELAQKNPNMKGLVLDLRNNG      240
241      GGVLQGAVGVAAAFLPEDATVVSTNGQVPDAKRVYKATYNNYRLSSLEDDPLKDLPALYK      300
301      KIPMVVLTNAYSASASEIVAGALQDHHRAQIMGKTTFGKGSVQTVRPLTNDTGIKLTIAY      360
361      YYTPSGKSIQAKGIRPDIPVDQNPEGDPDDALITREIDTERHLHNKQESEQPEMTEREQR      420
421      RVDELRRLEEENAKKTPEEREKDRRKKPVEFGTADDFMLQQAIAQLNGQPVKRSKSKLET      480
481      NPPADNGKAAKPSGKSGAKGASAPAAKPAVPAPGKQPPASAPIGEPLGTPTGKAP           535

>MER0092188 - YMXG peptidase [M16.019] peptidase unit: 88-318 ( active site residue(s): 131,201 metal ligand(s): 128,132,208 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MNHCAVLAAAGAQGTKACVATRFQRLSPSSKPLPARAARLARRVIPTLLLALLPWSMPAG       60
61       AQGVVASPMPGTQTAPAGATAHGTTEYRLSNGLRLIVKEDHRAPTVAHQIWYRVGGIDEV      120
121      SGTTGVAHMLEHMMFKGTPKVGVGEFSKQVAALGGRENAMTNRDFTMYYQQIGKQYLPRM      180
181      MELEADRMANLVITKDEFEREMKVVMEERRLRTDDSARGTVYEQLLATVYTAAAYRHPVI      240
241      GWMDDLVNMRVDDVKEWYRHWYVPNNAMVIVTGDVKAEEVRALAERYYGKLKPRTLPLRK      300
301      DQEEPAQKGIKRIWVKAPAENQYMVMAYKVPRLRDIEKDVDPYALEVLAAVLNGYDNARL      360
361      TRELVREQRLADDVNVGYDSINRGESLFVLDGTPATGHNTDEIERALRAEVQRIAKEGVS      420
421      PEELKRVKAQVVAGQIYKRDSVFGQGMEIGVSEISDISWRQIDRMLDKIKAVTPAQVQAV      480
481      AAKYFNDDNLTVATLVPQPIDPNKPKSQAPSGLRH                               515

>MER0387600 - subfamily M16B non-peptidase homologues [M16.UNB] peptidase unit: 42-278 ( active site residue(s): 86,162 metal ligand(s): 83,87,170 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MTQSVTTPQRALRKLAGAALGAVVLLAAQLAQAAIPIEHWTASTGARVFFVHSPSIPMLD       60
61       VNIDFDAGSRYDPPGKAGLATLTAALLDKGAAALEGQPARDEAKIADGFADTGAAFGGAA      120
121      GGDRGGIGLRTLTAQPELDQSVALAAQLIKAPTYPDAVVGREKQRLITAIREADAKPGVI      180
181      ADKALAKAMYPDHPYGVAATPDSVASITRDDIVRFWRDNYGAQRAVVTLIGAVDRKQAEA      240
241      IAEQLTRGLPPGSAAPAMPQVRLNIAPSEQRMPHPAQQSSVAIGQPAIARGDPDYFALLV      300
301      GNYVLGGGGFSSRLTDEVREKRGLTYGVDSYFAPSKQPGPFGISLQTKKAQTDEALALVR      360
361      QVLARFVAEGPTEKELRAAKDNLINGFPLRIDNNRKLLTNVANIGWYGLPLDYLDTWTAQ      420
421      IGKVTREQVRAAFQRHVRPDNMATVIVGGPVAAPATAARQ                          460

>MER0094523 - family C44 unassigned peptidases [C44.UPW] peptidase unit: 2-259 ( active site residue(s): 2  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MCQLLGMNCATPTDVTFSFTGFAARGGLTDHHADGFGVAFFEDKACRLFIDNQSAGTSPV       60
61       ADLIKRYPIKSKNVISHIRKATQGTVLLENCHPFMRELWGRHWIFAHNGDLKGFTPFLSG      120
121      VYQPVGDTDSELAFCTLMQGLRKRFPGSQPPLNELCHALADITREITLHGVFNYLLCNGQ      180
181      AQFAHCSTHLYYIVRQWPFSTAHLIDADLSIDFAQVTTPDDRVAVIATQPLTDNETWTRF      240
241      APGELIMFEDGHPTMTLTVPIPPEVQAKNAANTACT                              276

>MER0094524 - PyrC protein ({Escherichia coli}) [M38.A02] peptidase unit: 5-314 ( active site residue(s): 241 metal ligand(s): 7,9,92,134,168 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MTQKLTITRPDDWHLHLRDGAALAAVLPDTARQFARAIIMPNLKPPVTTVAQAQAYRARI       60
61       LAALPAGLQFEPLMTLYLTDNTTAEEIAAAKASGFVHGVKLYPAGATTNSDAGVTDIRRC      120
121      YPALEAMQRAGLPLLVHGEVTDPSIDIFDREAVFIDRVMTPLRRDMPELKVVFEHITTKD      180
181      AAEYVRDASGPVGATITAHHLLYNRNAIFTGGIRPHYYCLPVLKRETHREALVAAAVSGS      240
241      PRFFLGTDSAPHARGLKEHACGCAGCYTALHAMELYAEAFDAAGALDKLEAFASFNGPAF      300
301      YGLPRNTGTLTLEREDWELPAELPYGDTTLVPLRGGETLRWKAR                      344

>MER0094526 - aminopeptidase P (bacteria) [M24.004] peptidase unit: 181-444 ( active site residue(s): 253,364,375 metal ligand(s): 270,281,368,405,428 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MSSPDNALLAACRDRRARVLQHLRAGGGGVAILPTAPEAMRNRDSDYPYRHDSYFYYLSG       60
61       FTEPEAVLVLVAGAPGDPADADRSILFCRPKHEEREIWDGFRFGPDGARAVFGFDEAHSV      120
121      EEIDAALPPLLANRAQIAYPLADSTRTDVQMRRWMDAVRMQGRAGVAAPSVALDIRTVLD      180
181      EMRLFKDAGELATMRRAAQISAGAHVRAMQATRAGLREYHLEAELLYEFRRHGAQSVAYN      240
241      SIVAAGPNACVLHYRAGPAELRDGDLCLIDAGCEFDGYASDITRTFPVSGRFSPAQRELY      300
301      DLVVAAQDAAIAETRAGVPYNVPHDAAVRVLAQGMLDTGLLDRNKEGTLDDVLASGSYRR      360
361      FYMHRTGHWLGMDVHDVGEYRVASHGGEGERPWRPLQPGMVLTIEPGIYVRPAEDVPERY      420
421      WHIGIRIEDDAVVTDGDCELITRGVPVLADEIEALMRDNANAAGGLR                   467

>MER0052899 - subfamily M48C unassigned peptidases [M48.UPC] peptidase unit: 139-340 ( active site residue(s): 212 metal ligand(s): 211,215,276 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MPRWRRMDAMAAAAGGAAGADVRGAGLAPGYAAHGPGASTPVAAAPAARPPQPVPAISGE       60
61       ASDQVYDNLNRSVKAGQKSEFGLRTNNAVVEAGGVQLPDLGDPSTASLSPDMEKRLGDRI      120
121      MRDIRRDPLYVPDPLLSDYLNALGYRLVQAARRQNISGSTGAGTFATGFDLFAVRDRSIN      180
181      AFALPGGYIGVHTGLLVQSDTESELASVLGHEIGHVMQRHIARGITSQDQSMWIALASMV      240
241      LAGLAATRSPDAAAALAMGGQGAAIANQLSFSRGAEREADRVGFQILTAAGFDPHGMPDF      300
301      FMRLQRASGTAENSVPSYVRTHPLTSERIADMQDRVSHASKRKVANTPEYECARMRARVI      360
361      QESSPSDLQNLRAALRTQLPGATALRAPALHYGLAFTEQRLGRYPAAEQELAEARRLYGN      420
421      IPGASSGSPMLDVMAVELARAQGRVPEALSQASASMKAFALSHAVAIAYADTLVGSGRYE      480
481      EAVRFLRERTRQETSRSEWWELLARAYAGQGKRLQQHQALAEKYAMDGAYQAAIEQLQIA      540
541      RKAGDGDFYTLSEVDARLHQLERQYREDKQDSKGMPN                             577

>MER0094529 - YheT protein ({Escherichia coli}) [S33.A46] peptidase unit: 35-363 ( active site residue(s): 169,295,323  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MTQLPHHRLPQAVHAAQADPATAPGHGYGEGVPMPWWLRGGHAQTIIPARFTRRPPRVSF       60
61       RRERWDTPDQDFIDLDWTTHPVRPDTPLVVMFHGLEGDSGSHYAQALMHALSLRGWQGVV      120
121      PHFRGCSGELNLAPRFYHSGDSAEIRWVLERMRQRHCANGRKLLVVGISLGGNALLRFLG      180
181      EDGTSAGHVHAAAAISAPLDLAAGGAALSAGFNLVYTRMFLQTLKRKSLAKLGQFPGLFD      240
241      RDTMLASRDLYAFDNVVTAPLHGFVDTDDYWRRAASKPVLRDITVPTLVLNARNDPFLPA      300
301      RHLPGPADASPQVWLEQPEHGGHVGFMTPPEGWRRHLPLLPDGRFSGDIEWLPARILRFF      360
361      DGMM                                                              364

>MER0094530 - D-Ala-D-Ala carboxypeptidase PBP3 [S13.003] peptidase unit: 83-533 ( active site residue(s): 123,126,372  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MAAMPRTIAAPTASRPGALLRCLSPLLSPILAAVLLAGGPAPTPAQAKAPAKTVKAAKAA       60
61       KAATAAKTAADPALVSAGVPTPVAAALRRAGVPASAASFYVVRLGAGTARASWNAQQPMN      120
121      PASTMKLVTTFAGLQLLGPDYRWQTSLYADAQPGFDGTVNGNVYLRGHGDPKLVPEEMAK      180
181      LVAKARAGGATGINGDLVLDRSYFADGLDGNGTIDGEVQRAYNVGPDALLYAFKTLSFTL      240
241      TPDPASQTVAVSVTPELAQLKLDNRLTLTNGRCGDWQSSASPSVLPQADGTVLASFSGDY      300
301      ASDCGEHVLNIATLSHAEFTWGGFVAEWQRAGGRFAHMPALRSGKVPRGAVLLARHYGLP      360
361      LADIVRDINKFSNNVMARQLFLTIGAEMDRGGPASTGRSIRVVQRWLARQGLDMPGLVLD      420
421      NGSGLSREERISAYDMARLLQQAAASNVGPVLIDSLPVLGVDGTLRNRLTRANAAGNGYL      480
481      KTGTLADVRALAGYVDAADGGRYVVVSMINHPNAAQALEAHDALLQWVYRGAP             533

>MER0209539 - family S9 unassigned peptidases [S09.UPW] peptidase unit: 81-375 (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MTIHYPSANLSGEPAMYPIVETRLGKVRGLRCDGVYAFKGIPYAGPPFGMNRLRPPQSAA       60
61       PWRGVRDALSFGPKSPQIAYPPGIAEALGELVGGGEDCLGDGLANLGLLDQIAALEWVQQ      120
121      NIDAFGGDPGQVTIFGQSAGGMSVATLLTVPRAQGLFRRAIVESGNTPHVTSANTAKRIG      180
181      HRLAALLKVDPTREAIASTTPAQVLQAQAQLREELTADPDPAFWGEVALSSLPWAPTVDG      240
241      AILPAPPIDAIRAGVAANTALLVGSNTKETRLFLVPSGAIDRITEASVLALVAAYGLSAG      300
301      GLSGYRAAHPTATAGELFSEIQTDWYWRIPAVRLADAHAANARISTYMYEFAWRSPQLGG      360
361      RLGAAHGVEIPFIFDTLGPGAEALVGPTPPQSLADAMHRAWVAFAVNGDCGWPTYDPVHR      420
421      STMRFDTPSAVVDDPLAVRLALWHGVP                                       447

>MER0094536 - lysostaphin [M23.004]  ( metal ligand(s): 0,0,0 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MSRYTPSWLPAGLAAVLMLCMAAAMGVAPRSAYHDAGAPRRLEALQLPDVRDQLEKLADA       60
61       GATYIHEEPMRRGDTIATLLRRLGVEDPDAQQFISRDPAARTLFNLQPDQVVQAEVDQDK      120
121      LLVSLRALVAGNSSASRELLIRRAGDFQKPAFKANLQAVRNELRYEMRSGTITANGFFRT      180
181      MDAAKVPDDIVRQMISIFSGVVDFQHDIVQGDRFHIVYEAGFRDGALVRNGRVVAVELVN      240
241      RAQLYQALWYDGADGSNSGAYYTFDGRGMARPFLRSPVEFSRLSSGFGWRNHPVHHQWIK      300
301      HKGVDFAAPTGTRVFATADGTVDFVGQQTGYGNIVILKHPDGYSTYYAHLSGFAGIQPGQ      360
361      RITQGQLIAYIGQTGWATGPHLHYELRFNDVPQNPLSVMLMKPVTLSGRARQGFLSHASD      420
421      MLSRIHVLRGIEVASSLG                                                438

>MER0039236 - urease [M38.982] peptidase unit: 3-571 ( active site residue(s): 360 metal ligand(s): 134,136,217,272,320 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MAKISRQAYAEMFGPTTGDRLRLADTGLIIEIEKDFTIYGEEVKFGGGKVIRDGMGQSQR       60
61       MASDCVDTVITNALIVDHWGIVKADIGLKGGRIAAIGKAGNPDIQPGVTIVVGPGTEVIA      120
121      GEGMIVTAGGIDSHIHFICPQQIEEALMSGVTTMIGGGTGPATGTFATTVTPGPWYMERM      180
181      LQAADAYPMNIGLLGKGNASQQGPLLEQVEAGAIGLKLHEDWGTTPAAIDTCLSVADATD      240
241      TQVAIHTDTLNEAGFVEATIAAFKGRTIHTYHTEGAGGGHAPDIIKVCGEANVLPSSTNP      300
301      TRPYTVNTLDEHLDMLMVCHHLDPSIAEDIAFAESRIRRETIAAEDILHDLGAFSMISSD      360
361      SQAMGRVGEVIIRTWQTAHKMALQRGKLPGDPNDARGGHDNFRVKRYVAKYTINPALTHG      420
421      IAHEVGSVEVGKWADLVLWRPAFFGVKPSLILKGGMIAAAAMGDPNASIPTPQPVHYRPM      480
481      FASAGGALHRSSLTFVSQAALAAGIGERYGLAKTLSAVRGTRTVSKRDMVHNDWQPHVTV      540
541      DPETYQVVADGQLLTCEPATELPMAQRYFLF                                   571

>MER0054801 - TldD peptidase ({Escherichia coli}) [M103.001] peptidase unit: 7-475 ( active site residue(s): 268 metal ligand(s): 267,272,459 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MNAGDLGIRNLATAQQLLLAPYGLDEAKLQRVLADIFTHKVDYADLYFQYTRNEAWSLEE       60
61       GIVKSGSFSIDQGVGVRAVSGDRTAFAYSDDISLAALSQAAAATRTIGRAGNGRVKVAGE      120
121      LATHAGRNLYAPNDPLDSMSAAEKVALLERVERMARAKDPRVVQVMAGLAGEYDVVLVAR      180
181      SDGVIAADVRPLVRVSVTVIAEHGGRREVGSSGGGGRYAYGYFTDELLQKYVDEAVSSAL      240
241      VNLDARPAPAGSMTVVLGPGWPGVLLHEAVGHGLEGDFNRKGSSAFAGRMGERVAAKGVT      300
301      VVDDGTLANRRGSLNLDDEGNPTQCTTLIEDGILRGYIQDTLNARLMKMPVTGNARRESY      360
361      AALPMPRMTNTYMLNGDRDPQEIIASVKRGLYAVNFGGGQVDITNGKFVFSASEAYMIED      420
421      GKITYPVKGATLVGNGPESLKDVTMIGNDMRLDSGVGVCGKEGQSVPVGVGQPTLRIENM      480
481      TVGGTA                                                            486

>MER0094544 - family S54 unassigned peptidases [S54.UPW] peptidase unit: 35-197 ( active site residue(s): 123,184  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MRPDAAVPPAPAGASWPGLLAAIALVWALSAWFTFMPWWHAHGLYLRDAVRLDGQWWRLA       60
61       TAMWVHLDGHHWLADALAATGVLAIAARVARARTLLLVLVACGIGVQVVLLRVPAIAWYG      120
121      GLSGALHGLALWGALGLLRASGLARVTGVLLCLGVLAKVWVEQSWLAPVVFDPAWGFGVV      180
181      RVAHAAGAVAGLLCWVLQEWWLARRPARGDDA                                  212

>MER0094545 - peptidase MprA ({Burkholderia}-type) [S08.107] peptidase unit: 142-491 ( active site residue(s): 180,244,345,430  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MPQPAQSDFRSSPVARRWRAIVIAAAAVCGAIPASAALAAGVHAAPAYTGQIIVRWRDGA       60
61       DGTSKTPAAAADALKQLSARTGIAVTARRAMGGNLQLLQVPDALAADPEGAAARLRQDPR      120
121      IADAVPDRWLKLHDTLPNDSEFISRQPYLMGTGTAVGGVNLPRAWDRSRGSSGVVIAVVD      180
181      TGILPHPDLAARVLPGYDFISSSTISNDGDGRDADATDAGDNVTAGFSCPGGSPAPTTEP      240
241      NSWHGTRVASVLGALTNNAQDIAGVDWNARILPVRVSGRCGALLSDTVDAMRWAGGLSVP      300
301      NVPANPTPARVVNISLGGGTCSSIEQQAVTDLNARGVVVVAAAGNERGAVEAPGDCSGVI      360
361      AVTAHANDGENASYANVGPQVAISAPGGGCGNSQVVNGQCTTAPSVIRTLNNDGKTGLGN      420
421      YVVTSSAGTSFAAPMVSGVVAMMFAVNGSLTPAQVTAALKSSARPHPSGTYCTTNPGVCG      480
481      AGLLDADGALAAAAGMPPAQAAPAPASGNGGGGGGGAVAPWTAVLLALSGLLAFALRRRM      540

>MER0094547 - family S33 unassigned peptidases [S33.UPW] peptidase unit: 1-322 ( active site residue(s): 135,267,295  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MTIVLTVFAVLIGLILALGASLYLYTWRTARRIEAAMPPHGRFVDVPGARLHVVERGQGP       60
61       AVLLVHGLSGQLENFGYGMIGPLAEHFRVIAVDRPGAGHSIRKPGSAADLPAQAAALAAL      120
121      CDKLGLERPLVVGHSLGGAIALALAIHHPERVGGLALIAPLTHPPKAISPVFQAMTVPSA      180
181      WLRRLMAWTLVVPMSIRRREAVMDIVFGPDPVPDDFPTRGGGLLALRPRHFLAASEDLIG      240
241      AAQSLPALLHRYGTLRVPVSVLYGREDRILDFAEHGEALAAKVPGATLTLVSGGHMLPVT      300
301      AIDTSVDFVRDAAARLQVPAPAQAQVA                                       327

>MER0094549 - lysostaphin [M23.004]  ( metal ligand(s): 0,0,0 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MTQTRHDIEPGRRRALGLLLAAAAAVAAGCGTTGGPVPDGYYRVERGDTLYSIARKHRRS       60
61       VRDLTRWNSDITSPSQIEVGQLIRVRPPGGASGSASAGQAVTDTPRVDSGPASRPPASSI      120
121      RLQWPADGRVTAGFAPPASKGLSIAVPANGAVRAAAAGRAIHVGNLRGYGMLVIVKHSDD      180
181      WLTVYGNLDQPLVTEGAQVSAGQDVGRMGASPSELHFEVRGNGKPVDPAAYLPSRG          236

>MER0094551 - CTP synthetase [C26.964] peptidase unit: 198-550 ( active site residue(s): 383,520,522  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MTKFVFVTGGVVSSLGKGIAAASLAAILESRGLKVTLLKLDPYINVDPGTMSPFQHGEVF       60
61       VTEDGAETDLDLGHYERFVSAKMRKSNNFTTGQIYESVIRKERRGEYLGKTVQVIPHITN      120
121      EIQAFVERGAAASHDGKADVALVEIGGTVGDIESLPFLEAARQMSLRMGRNHCAFVHLTL      180
181      VPFIASAGELKTKPTQHSVQKLREIGISPTALLCRADRPIPDDERAKISLFANIPQDAVI      240
241      SVWDADSIYKIPQMLNEQGLDRLICEELRLDPKPADLSMWQKLVNAQENPEHEITIGMVG      300
301      KYVDLTESYKSLIEALRHAGMHTATRVNIEYIDSEELESGHLEVLAPLDAILVPGGFGKR      360
361      GTEGKIRAIQYARENKIPYLGICLGMQLAVIEFARHLAGMTDANSTEFNLETEHPVVALI      420
421      TEWVDREGKVEQRSADSDLGGTMRLGAQRVPVKEGTKAATIYGAEVNERHRHRYEVNNHY      480
481      VPTLEKAGMVISARTPTENLPEMMELPESMHPWFVGVQFHPEFTSTPRDGHPLFKAYVEA      540
541      ALASQQRKGA                                                        550

>MER0094554 - ywhC g.p. ({Bacillus subtilis}) [M50.A05] peptidase unit: 11-205 ( active site residue(s): 24 metal ligand(s): 23,27,156 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MDSSLIQTFAVYALPVLFAITLHEASHGYVAKLFGDDTAYALGRVSLNPIRHIDPIGTIA       60
61       VPLLLYIMTSGQFVFGYAKPVPVAFERLRNPRWHGMWVALAGPASNVVQAFVWVLLAIGL      120
121      TWGGVREPFFGEMALAGVRVNLVVAAFNLFPVPPLDGGRVLTALLPQGIARAVSRIEPYG      180
181      IFVVLALVAAGVITTIWMTPVVNVLMSLIELMLRPIVMLLH                         221

>MER0094555 - family S33 unassigned peptidases [S33.UPW] peptidase unit: 1-268 ( active site residue(s): 98,222,249  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MELTIAGQPAYAYTGGKPFDPALPCAVFVHGAQNDHSVWALQTRWFANHGFSVLAVDLPG       60
61       HNRSKGAPLATVEAMADWVMALVAAAGVKTPAFVFGHSMGSLIALECAARHAQAVRGIGL      120
121      LATAYPMKVSDALLDASLNREGEAIAMVNTWSHSSLANKPSSPGPGAWMHGGSQRLMERV      180
181      SRNNPQAHVFHNDFSACNAYAHGEEAAAAVACPALFITGTKDMMTSPKAAQALAGKMAKA      240
241      SLVTVPCGHALMGERPDEVLDALAAFARKVVAAG                                274

>MER0094556 - family S33 unassigned peptidases [S33.UPW] peptidase unit: 1-293 ( active site residue(s): 108,204,273  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MSASPRLGFVQCISPAGLHRMAYHEWGDPANPRVLVCAHGLTRTGRDFDTVASALCGDYR       60
61       VVCPDVAGRGRSEWLADANGYVVPQYVSDMVTLIARLNVEKVDWFGTSMGGLIGMGLAGL      120
121      PKSPVRKLLLNDVGPKLAPSAVERIGAYLGLPVRFKTFEEGLAYLQTISASFGRHTPEQW      180
181      RELNAAILKPVQGTDGLEWGLHYDPQLAVPFRKSTPEAIAAGEAALWRSFEAIEGPVLVV      240
241      RGAQSDLLLRETVAEMVARGKHVSSVEVPDVGHAPTFVDPAQIAIAPQFFTGA             293

>MER0093450 - subfamily M3A unassigned peptidases [M03.UPA] peptidase unit: 9-692 ( active site residue(s): 479 metal ligand(s): 478,482,508 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MDQAANATNPLLDFSDLPRFAEIRPEHISPALDVLLERAQQAVARAEDPATPADWSNAVQ       60
61       ALEAATEPLGRAWGVVSHLSAVADTPELRKAHAENLPRMTEFWSSLGQSLALYEKYKALA      120
121      ASPEFAGMSAARHQLIENELRGFRLGGAELPEGKKPRFAEIQEQQAQLSKAFSDHVLDAT      180
181      NAYALHVEDEGRLSGLPDDAREAARHAAEKDGKAGWKFTLHFPSYFPVLQYADDRALRQT      240
241      LYVANVTRASELGPQHGQGQADWDNTANMREQLALRREEAQMLGYQCYGEVSLVPKMAES      300
301      PAEVLKFLDELAVKARPYAEKDWAEMKAFAAAELGLPELAPWDVAYASEKLRQQRYAFSE      360
361      QEVKQYFPEAKVLEGLFGVVQKLFSVRIEPEQAQTWHKDARFFRVTTADGTLLAQFYIDL      420
421      YAREGKRGGAWMDDARGRKVLEQGGVQTPVAYLTCNFSAPVGDKPALFTHDEVITLFHEF      480
481      GHGLHHMLTQVGELGVSGINGVEWDAVELPSQFMENFCWEYEVLTGMTQHIDTGEPLPRA      540
541      LFDRMLAAKNFQNGMMTLRQIVFSSFDMHLHTDFDPAGATSVLDLSRQINDRVHVVPQHP      600
601      LSRWPNTFSHIFAGGYAAGYYSYKWAEVLSADVYAAFEEAAQLSGSVLDSETGARYQREI      660
661      LSVGGSRPAMDSFVAFRGRAPQIDALLRHGGMAA                                694

>MER0003285 - subfamily T1B unassigned peptidases [T01.UPB] peptidase unit: 3-188 ( active site residue(s): 3  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MTTCVVVRKGAEVAIAADALVTFGDTRLSRAYERNQKVFPVGDGFIALAGTTAHFPVMRT       60
61       LLAGLGEECRLGSRDDVFRTFLKVHEKLKSDYFVNTKEDEDDPYESSQIVCLIANPAGIF      120
121      GVYSYREVFSFDRFWGIGSGRNYALGAMHAVYDRPDLDAGEIARIGVDAGVEFDKSSAGP      180
181      IEVHTVRLHEGDTAPAPPAGGATGGNPATGSTAPDSAATNNDGAP                     225

>MER0094558 - murein-DD-endopeptidase [S11.002] peptidase unit: 99-380 ( active site residue(s): 134,137,191  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MSMVAAPVAEAATKSATTQKTSKKQVKSVNAEKKGASKIVAKSSRSGKVAKREASSTRKV       60
61       VVLKNGKRHTVVAQRAAPVRAAFTPAKPSLGEAMGLRDTDDALALRSSVALVMDQNSNEV      120
121      LFQKNASAVLPIASITKLMTALVVMDARLPMDEVLTISEEDRDTEKHSGSRLRFGTQLTR      180
181      QELLLLALMSSENRAASALGRNYPGGLPAFVQAMNRKARELGMNDSHFVDSSGLSSSNVS      240
241      SATDLVRMVNAAYRNPTIREFSTQTEHEVNVLGRTQHYVSTNRLVRGGNWEIGLQKTGFI      300
301      SEAGQCLVMQAKVQGRNVVMVFLDSAGKLSRFADANRVKDWLEHAPSPSSPQRGFPSSPN      360
361      LTQAPGGAHAILASQQSRGI                                              380

>MER0094560 - family S33 unassigned peptidases [S33.UPW] peptidase unit: 34-300 ( active site residue(s): 126,252,280  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MAAAARGCRPAVPVPRGPDMPMFKQQLRLCTSRDGVRLAYAITGCGAPLVKAANWMSHLE       60
61       FDVGSPVWSHMITALSATHTLIRYDERGCGLSDREIEDLSFDAWLRDLETIVDATGVNHF      120
121      PLLGISQGASIAVAYAVAHPERVSHLVLHGGYARGRLKRDNLSQRLLEEAELMNKLAELG      180
181      WGQENPAFRQFFTTQFIPGGTAEQHAWFNELERVSTSPLNAARFMRVFNEIDVVKLLPRV      240
241      SCPTLVLHAVRDARVPFDEGRLIASEIPGARFVPLESGNHLLLETEPAWLRWLDEVRAFL      300
301      PATEPVRDPAFSALTRRERDIVELIAQGRDNAQIAAHLDLCEKTVRNHITSIFAKLEVEN      360
361      RAQAIVLARKAGFDRAGA                                                378

>MER0092104 - family M20D unassigned peptidases [M20.UPD] peptidase unit: 41-450 ( active site residue(s): 119,185 metal ligand(s): 117,153,186,424 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MAVRDSASRPTTRFALATLALATGLLCNTAQAQTQGAETLHAQIETRAKAVEKQLIAWRR       60
61       DIHQHPELGNYETRTAKLVADQLRKLGMEVKTGVAKTGVVGVLKGGKPGPVVALRADMDA      120
121      LPVKERVDVPFASKAKGQYLGKEVDVMHACGHDTHVAILMATAEVLAGMKDQLPGTVKFI      180
181      FQPAEESPADFEPNGSNTWGAKQMVSEGVLDNPKVDAIFGLHVSSGIESGKLGWRSGPSM      240
241      AAADQFWIDVKGRQTHGARPWGGIDPIVVASQIVMGLQTIQSRQVNAMLEPSVITVGTIH      300
301      GGNRMNIVPEKVEMMGTVRTYDEGMKKDIHARMKRTTEAIATSAGAEASFRVVELYNATI      360
361      NQPALTEKMAPTLQRVAGEGNWMITPKATASEDFSFYQEKVPGLFFNLGVTPKGQDVTKA      420
421      PSNHSPEFYVDEPALINGVRALSSLTVDYMVMAQR                               455

>MER0094562 - acetylornithine deacetylase ArgE [M20.974] peptidase unit: 20-401 ( active site residue(s): 92,154 metal ligand(s): 90,122,155,182,376 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MPAQAASSRQPVTETAARGSALEWTQRLVAYDTTSRNSNLGLIESVRDHFLAKGLKPHLS       60
61       YNPQQDKANLFVTVPAADGNTNGGIVLSGHTDVVPVDGQDWTTDPFKPVVRDGKLYGRGT      120
121      CDMKGFIGTSLSLLPAILQARLREPVHYALSFDEEIGCMGAPYLLAELRDRGVTPGGCIV      180
181      GEPTSMRVIVAHKGINAYRCCVRGQAAHSSLTPRGVNAIEYAARLICFIRDIADEFKANG      240
241      PYDQAFDVPYTTAQTGTIQGGIALNTIPALCEFVFEFRNLPGVDPEAIYARIQAYANDVL      300
301      LPKMRAEHADAGLTLSKIAAAPSLDVAEQEAITQLVRALTADRDTNKVAYGTEAGLFQRA      360
361      GIPAVVCGPGDIQQAHKPDEFVALEQLAACEAFLHKVVDSLRVS                      404

>MER0094563 - At4g20070 ({Arabidopsis thaliana}) [M20.A07] peptidase unit: 20-417 (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MTQTSASLGDTILAHADQLASFSDMEGGLTCAYLTPAHRAAQARLAQWMEAAGMQVRIDA       60
61       IGNVIGRYAADPAVPDARVLMTGSHFDTVRNGGRYDGRLGIVLPIAVVGALNQAGIRLPY      120
121      HFEVVGFAEEEGLRFKTSFLASSVLAGRFDPTLLERQDADGITLREALAASDLPGAGDLQ      180
181      ALRAAAVDPASLLGFVEVHIEQGPVLLHHGLPLGVVTQIAGSSRFAVRVEGLASHAGTTP      240
241      MGMRRDAAAGAAEMILLVEQRCTAAPTLVGTVGQLQVPNGSSNVIPAACTFSMDIRAGED      300
301      SIREAAIADIVAGIGQIAERRGLAAQVERVPPVNNAPCARWLMDQFGAVLKKRGLQAFEL      360
361      PSGAGHDAMMMQRITDVAMLFVRCGNGGISHNPLETITAEDAQLAAEVFVDFLRHFQPRG      420

>MER0054276 - Lon-A peptidase [S16.001] peptidase unit: 540-793 ( active site residue(s): 682,725  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MMSGTQLLPAEPIRLPLLPLRDVVVFPHMVIPLFVGRPKSIKALETAMEAGKSIMLVAQK       60
61       TAAKDEPTADDLYEVGCIANILQMLKLPDGTVKVLVEGTQRANIREVSEDDAHFMCEAVP      120
121      VPPAPGESAETEALRRAIVSQFDQYVKLNKKIPPEILTSLSGIDEAGRLADTIAAHLPIK      180
181      LEQKQKILEMVNVTERLESLLSQLEGEIDILQVEKRIRGRVKRQMEKSQREYYLNEQVKA      240
241      IQKELGEGEEGADLEELDKRIKAARMPKEAKKKADAEFKKLKLMSPMSAEATVVRNYIDT      300
301      LVNLPWRKKSKVNNDLANAERVLDEDHYGLEKVKERILEYLAVQQRVDKVKAPILCLVGP      360
361      PGVGKTSLGQSVARATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGKILQSLSKVGVRN      420
421      PLFLLDEIDKMGMDFRGDPSSALLEVLDPEQNHTFQDHYIEVDFDLSDVMFVATSNSLNI      480
481      PPPLLDRMEVIRLSGYTEDEKVNIAQRYLLPKQIKNNGLKAGEIEVAESAIRDIIRYYTR      540
541      EAGVRSLEREVSKIARKVVKLLLLKKESGTIKVDSENLDKFLGVRKYDFGLAGKENQVGQ      600
601      VTGLAWTEVGGDLLTIEAAIMPGKGNITRTGSLGDVMKESVEAARSVVRSRARRLGITDE      660
661      MFEKRDIHIHVPEGATPKDGPSAGGAMTTALVSVLTGIPVRADVAMTGEITLRGEVLPIG      720
721      GLKEKLLAAHRGGIKLVLIPEENVKDLAEIPDNVKNAIEIVPVRWIDKVLELALERKPEA      780
781      LPEEDAKPAEVADKATAKVERLHH                                          804

>MER0209297 - family S33 non-peptidase homologues [S33.UNW] peptidase unit: 10-305 ( active site residue(s): 112,267,295  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MENNMAAPAAVIRHLQYATLPNGTRLHYASAGERGKPLMLFVHGFPEFWFEWEAQLAEFG       60
61       RTHFAVAPDLRGYNLSSKPAEVEAYRPRHIVEDLVQLVSALGYDQAVVVAHDWGGAICWN      120
121      LAIQFPQLVRQLVIVNSPHPYLFARALATDPEQQAASAYMNWLRKPGSEKALAANDFALL      180
181      DRMLADADGKPAAWYTPETRARYHAAWSQPGEGQDAGVHPLTGGVNFYRASPMHPPGEGE      240
241      PPPDISRLDPAAFVVKVPTLVIWGERDRALPKSLVDGLGDFVPDLRLERIPEGTHWVIHE      300
301      QPERVNLLIRSALPG                                                   315

>MER0094568 - subfamily M48B unassigned peptidases [M48.UPB] peptidase unit: 78-246 ( active site residue(s): 129 metal ligand(s): 128,132,175 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MDSHAPDRGALVPLAYHATVVDYLRRHEPEVWRWAGARATGADHREALRSMLLRDTYRLE       60
61       ADAHADVHAALAEAMARLGIDAPATLYQSPGHDMNASLVYVPGEVHIILQGPLLDRLSPP      120
121      ELLAVFGHELAHYLLWSRDDGQFLVADRILNDALAAPGASASHRETWRRYALHTELFADR      180
181      GGAVAARAVAPAVSTLVKVQTGIGSVDAAAYLRQAAEIEAHEAGASAAHSHPETFIRARA      240
241      LALWWEGAADLDPWIETRLHGPLALEKLDLPGQIRLQALTRGFLAHFLAGTPLASEAVLA      300
301      QVRMMFPDWRDDEPAIGPEGLGPDVADDSVRGYLNALMMDLALADPDQQDAALLRAGQVA      360
361      QALGSLEALHGNLRRDAGFGKRELDRYQRQLHRELAREGRA                         401

>MER0094569 - subfamily S8A unassigned peptidases [S08.UPA] peptidase unit: 121-430 ( active site residue(s): 159,192,290,374  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MRHFAVLGCLTAVALSIQAAPLPDSNRAAPGTEAARSARLVDRDGDRISDDLQARIAAAR       60
61       PGDLVRVVVTFSGPGTAATARQAVGAFTLDREFRIIRGFSATMTTAQIRALAQQPGVRRI      120
121      EEDFTVSTKLNAARADFGTDATRTSFGVDGAGIKGCIVDTGVDSNHEQLDARPIPFFDAI      180
181      NGRTSAYDDHGHGTHVASIAFGDGTGGSGAATYKGVAPGAAIYAAKVLDQSGSGLESQVI      240
241      AGIDWCVSQGVRIISMSLGSSAPSDGQDSLSQAVDAAVSSGAVVVVAAGNSGDEPGTVGS      300
301      PGAAAQAITVAACAEWSAPAGAPNHSDGIYVTPFSSRGPTLDNRVKPDICAPGLTITAAK      360
361      AGTVSGYVTYSGTSMATPFVSGIVALALQANPILSPADLRQKLEVTAQDRGPAGKDNDIG      420
421      AGLLDGYALVASAKGGTSYQPTVFPTYRRVTGSVANHGQWSYTFSIAQADLGVPIGATVT      480
481      INGQAKCILPLLGGCFAAQWDPDLDARLLDPNGVVLSESLCMAGVECGGIGRQETLHALP      540
541      TVAGTYTIQVSPSEDSVNLGKGGSFALDLSSGPRAGIASLPVVHVGGLSASSTGNKTGWT      600
601      TTVTVTVHDASHNPVPNATVSGTWSGGYSGSSACTTGAGGQCMVTSGTISKRKNSVTFAV      660
661      TNITGTLTYQASSNDMTSVTATKP                                          684

>MER0094570 - family M20 non-peptidase homologues [M20.UNW] peptidase unit: 17-417 (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MNAPTPSSSLTPVGPRINSERLWEHVCAMARIGATAKGGVNRQALTAEDTQGKMLLLQWA       60
61       SRRGYQTSIDPIGNLFIRRPGRNPGLSPVLTGSHLDSQPTGGRFDGVYGVLAGFEVLETL      120
121      DDHGIETERQIELVVWMNEEGSRFPPPTMGSAVAAGALPLADALAIKDVSGIDVERALKA      180
181      QIAEFPVLEERPLGMSGFAYIEAHIEQGPVLENQACDVGIVTGIQGLHAYEIQLLGAEAH      240
241      AGTTPLRHRKDALVAATKLIGYIRAAIDDPEDILRFTVGRLEVYPGSPNTVPGRVTFNID      300
301      LRHPDPDSLRRAGETILQLCAGEIEGCPVSAKVLLRSTPVTFDDRVVATVRRAAGGRAMK      360
361      FLNIVSGATHDAKYTAQHIPTGMIFVPCEKGISHNEAENAREVDVAAGAQVLCDAILAIM      420
421      SEQL                                                              424

>MER0214242 - family S33 non-peptidase homologues [S33.UNW] peptidase unit: 48-340 ( active site residue(s): 154,299,328  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MTERIDLPRRGMLGTAALTVAAAQLGMLTSAQAQQSKPAPLPSSRPGTHTAFAPIKQINA       60
61       GLLNVGYAEAGPADGPAVLLLHGWPYDIHSFVDVAPLLASRGYRVIVPYLRGYGSTTFLS      120
121      GDTMRNGQPAAVALDIIALMDALNIQKPILGAFDWGARTACIIAALWPERCNGLVSVSGY      180
181      LIGSQAAGKMPLSPEAEFRWWYQFYLATDRGRAGYQKYTHDFTKLIWRQASPKWRFDDAT      240
241      FDRSAAAFKNPDHLDITVHNYRWRQGLAEGEPKYDEFEQRLASAPTIGVRTITMESDANG      300
301      APHPAPSSYASKFTGKYAHRDVKGGIGHNLPQEAPREFAQAVVDVDKF                  348

>MER0223248 - family M81 unassigned peptidases [M81.UPW] peptidase unit: 1-463 (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MNILVAGFQHETNTFAPTMATYESFVRGEDFPAMVRGEAIYDLLDVNVPISGFIHHVREH       60
61       GHTVTPVIWAAAGASAHVTTDAYERIAGEIVEAVATASYDTIYLDLHGAMVAQHLDDGEG      120
121      ELLARIRAATGPDMKIVVSLDLHANVTERMLALADGVVAYRTYPHVDMAATGKRAAEMLL      180
181      ELRRRETRAHLVAKRVPFLIPVNSMSTMMQPAQGIYGLLEELEQQGVLSLSFTPGFPAAD      240
241      FAECGPVVWGYGFDKASVERAVEALLARICEPESQWAVQFEEPDAAVQRAMRIAQTATRP      300
301      VILADTQDNPGVGGDGNTMGMLRALLKAGAQDAAIGIICDPAAAAAAHQAGVGARIDIAL      360
361      GGCPQVSEDAPLRATFEVEALSDGKFVYGGPMMHGKAADMGPMARLRLDGVLIAVSSTKA      420
421      QLLDRNMYRAVGIEPAEMKILVNKSSVHFRADFAPIAEDIFVVRAPGPFIADPADLPWQH      480
481      LTSGMRLKPNGPAFAPVPRIYDKLTQLGIELPKASGPAAAYVPSVRSGKLIHVSGHLSRV      540
541      DGQVRTGRFGEDLRTADGVAAARLVAIDLLATLHAATGDLDSIVRIVKLTSLVQSTADFT      600
601      EQHFVTNGASALFAEVFGTRGQHARSAFGVSQLPLGACLEIELIVEVA                  648

>MER0094575 - family C26 unassigned peptidases [C26.UPW] peptidase unit: 1-235 ( active site residue(s): 91,178,180  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MATRTTHVIQHVAFEHAGVIGNALRARGHALQVFQAGVDDLAPIADNPADLLLILGGPIG       60
61       VYETDAYPWLEAEIALIRQRLAAGGKMIGVCLGAQLIARAAGARVYAGTREIGWAPIAPT      120
121      PAGQDSALAELAAAHWEVLHWHGDTFDLPPGAQLLASTAAVQNQAYAIGNQVLALQFHPE      180
181      VMPRDIEAWLIGHTVELAKAGIDPRTIRARTAEVGATVAAAGERMFARWLEEAGL           235

>MER0094577 - murein tetrapeptidase LD-carboxypeptidase ({Escherichia}-type) [S66.002] peptidase unit: 11-315 ( active site residue(s): 114,213,283  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MSTPNSRPPHTEVRLIASSGYPHDVAIAARGCAWLKHHGYHMTNPDVLARRYLRFGGTDA       60
61       ERLADLHAIGTGAPHELTLAVRGGYGIARLLAQVDFARIAEQASASGTPIVGHSDFTAFQ      120
121      LACLAATGAVTFAGPMLLADFGAEVVDPFMWEHFEGILRNPAYSVDVAAPQSGGQPFSGS      180
181      VEGTLWGGNLAMLCSLLGTPFMPQVEGGVLFLEDINEPPYRVERMLIQLQQAGVLGAQRA      240
241      IVLGDFSNYRVTDYDNGYDMDAVVAYLRDQLPVPVLTGLPFGHCARKLTLPVGAQVRLAA      300
301      RADGFSMAFSGYPVLPPLA                                               319

>MER0034897 - family S33 unassigned peptidases [S33.UPW] peptidase unit: 1-260 ( active site residue(s): 95,212,239  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MRFATRDGLRLHYELNGPAGAPVLALSNSLGTTLSMWDPQMPALLERFRVLRYDTRGHGA       60
61       SGVPAAPFGMAELGADVLAVMDHAGVEHAHFCGLSMGGMTGIWLARHHPERFGRFVLANT      120
121      AALIGPASGWNTRIERVSNEGMAAIAGGVLARWFTPAALAGDPAHIAPVLAMLASTDADG      180
181      YIANCAAVRDADLRGLLPGIRSRVLVIAGVQDAATTPEQGRELAQGIAGAEYLALNAAHL      240
241      SNWELPEAFSHAVIHFLSQA                                              260

>MER0094579 - BSU23640 g.p. ({Bacillus subtilis}) [S09.B04] peptidase unit: 7-219 ( active site residue(s): 112,164,192  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MEHITIEQVRIHIGDIALPGDLTLPEAASGLVLFAHGSGSSRYSVRSRGVAATLNRVGLG       60
61       TLLFDLLAPDEDAGRSKRFDIALLGERLKAATVTVAHLTRDRHLRLGYFAASMGAAAAIR      120
121      AAAEPPPRMRIDAVVARGGRVDLAGHEALRQLQSPTLMIVGEADPVVLKLNARATAWMQC      180
181      EKRLEVIPGATHLFEQPGALEQVGELAGKWFCQHFAAAGGNL                        222

>MER0054805 - methionyl aminopeptidase 1 ({Escherichia}-type) [M24.001] peptidase unit: 1-269 ( active site residue(s): 84 metal ligand(s): 101,113,176,209,240 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MSIHLNTAEDIAQMRVACRLGSEVLDYITPFVQPGITTGEIDRLCHAYMREVQGTVSACL       60
61       NYAPPGYPPFPGAICTSVNDVICHGIPGDRVLKNGDAINLDITVITKEGYYGDNSRMFIV      120
121      GEGSILAKRLSQVTYECMWKGIAQVRHGARLGDIGHAIQIHAEAAGYSVVREYCGHGIGK      180
181      NFHEDPQILHYGRPGTGAEIKAGMIFTIEPMINAGKRDIRTMPDQWTVKTRDRSLSAQWE      240
241      HTVLVTETGYEVLTVSAGSPAPPAFITDSVAA                                  272

>MER0052526 - subfamily M20A unassigned peptidases [M20.UPA] peptidase unit: 1-383 ( active site residue(s): 76,141 metal ligand(s): 74,107,142,170,356 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MTATLALTEDLIRRRSVTPADEGCQAILETRLKALGFDCEALVSGPDDFRVTNLWAVRRG       60
61       TQGKDGKLLVFAGHTDVVPTGPLEQWHSDPFAPTHRDGKLYGRGAADMKTSIAGFVVAVE      120
121      EFVKAHPAHAGSIAFLITSDEEGPAHDGTIKVVEALSARGERLDYCVIGEPTSVDTLGDM      180
181      VKNGRRGSLSGKLTVKGIQCHIAYPHLGRNPIHEAAPALAELAAEVWDQGNEYFPPTSWQ      240
241      MSNIHGGTGATNVIPGHVTIDFNFRFSTASTPEGLKARVHAILDRHQLEYALDWTLGGEP      300
301      FLTPRGELSDALSSAIEAETGVKTELSTTGGTSDGRFIAKICPQVIEFGPPNASIHKIDE      360
361      HVEVRFIEPLKNVYRGVLERLVA                                           383

>MER0094583 - YnbC protein ({Escherichia coli}) [S33.A54] peptidase unit: 7-294 ( active site residue(s): 117,232,262  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MDRPSTRQPQERQFETHDRQTLFYRHWPAVEGPARGAVVLFHRGHEHSGRVAHLADELNL       60
61       PGYEIFAWDARGHGRSPGERGYSPSLADSVRDIQTFTTHIAEVHGIPLERTAVIAQSVGA      120
121      VLAATWVHDYAPPIRALVLASPAFKVKLYVPFARPGLKLMQRLRGKFFVNSYVKAKFLTH      180
181      DPERIASYDSDPLITRPIAVNILLDLYDTAERIVADAAAITVPTQLLISGADWVVHRGPQ      240
241      DRFYERLGARTKERIVLDGFYHDTLGERDRKLAVDAARRFILREFDMPSAPRSLLDADQI      300
301      GPFREESDRLASAPVGLAAWYWRAARANLKLGGILSDGVRLGHETGFDSGSTLDYVYRNA      360
361      PSGRGKLGRLADQQYLDAIGWRGIRQRKVHAEALIAEAVRRLRAGGMPVRIVDIAAGHGR      420
421      YVLEALGALDGGAAAVESILLRDYSPLNVEQGRALIAAKDLADVARFEQGDAFDGDSLAA      480
481      LAPAPTLAVVSGLYELFPDNAMVRRSLEGLARAVPPGGYLVYTGQPWHPQLEFIARALTS      540
541      HRAGAAWVMRRRSQAEMDELVRAAGFDKVTQRIDPWGIFTVSLARRRGA                 589

>MER0094584 - D-aminopeptidase DppA [M55.001] peptidase unit: 1-272 ( active site residue(s): 115 metal ligand(s): 8,10,60,104,134 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MKILVSTDIEGVAGVFHAEQTRPGNGEYERARAWMTGEANAAVDGAFAGGATEVLVNDSH       60
61       GGFRNLLPDQFDPRARVVLGKPRYLGMMAGVEAGVDGVLMIGYHGRAQSRGVLAHTINSG      120
121      AFARVWLNGKELGEAGLYAALAGEFGAPVLMASGDDVFVQETHALMPWVRYVETKSADGF      180
181      GSGTSLSPAAAREAIAAAAATAVRERAQAQCLRIAAPVTCTLQTLTPAHADLFCQWPALE      240
241      RRDGVTLSFQADSVQAAVRMLNCLSAMSFMLK                                  272

>MER0094585 - family P01 unassigned peptidases [P01.UPW] peptidase unit: 231-348 ( active site residue(s): 231  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MTASTTGVPRVGSLPAGPLDSIADVAGVTVGHCTLADGAVQTGVTVIRPHGGDPYRDKVP       60
61       AAATVLNGFGKSIGLVQVDELGVLETPLALTNTFSVGAVAQAQIRAAVAANPEIGRALPT      120
121      VNALVFECNDGYLNDIQRMAVEGSHYEAALAGAGHDVAQGAVGAGRGMSAFGVKGGIGTA      180
181      SRLAGGYRVGALVLANFGTPESLTVAGRLAGPELVQRLAQPDTAAQPEKGSIIMILATDA      240
241      PLDARQLRRLSLRAGAGLARTGSVFGHGSGDIAVAFSSAYTVPHDTARPMPAVAMLHETH      300
301      LDPLFRAAADSVEQAILHALWHAAPVQGRDGHGRRALLDVMPELGQTA                  348

>MER0094586 - family T2 unassigned peptidases [T02.UPW] peptidase unit: 6-310 ( active site residue(s): 192  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MQPAVIAIHGGAGTITRAAMDAAREREYIEALQHVLQAGQRILAEGGSALDAVTEAVRLL       60
61       EECPLFNAGKGAVLTHAGTYELDAAVMDGATLAAGAVACVTRLRNPVLAARAVLDHSEHV      120
121      LFAGAGAEAFAQSQGLELVGPDYYFTQARHDQWQRALGNAGMALLDHDGAALVAQGKTQA      180
181      SDPIDPDSKFGTVGAVACDGRGNLAAATSTGGVTNKQVGRVGDTPVIGAGCYADDVAAVS      240
241      ATGTGEMFIRTVAAHDVAAQMRYAGLSLEESARRVVMEKLPAINGRGGLIAVDRAGNVTL      300
301      PFNTEGMYRGFARVGEAVNVSIYG                                          324

>MER0094593 - subfamily M48C unassigned peptidases [M48.UPC] peptidase unit: 97-270 ( active site residue(s): 151 metal ligand(s): 150,154,210 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MPWPLSALSELPTKNNIMKASLSLASCAMAAALLAGCSGGMPTNLDGVMSAGTSLAKAAT       60
61       LSDADVKSLSDQACAESDKTNKIAAANTTYSKRLVKIMSGLKNSDVPNVNAKVYMTKDVN      120
121      AWAMANGCVRVYSGLMDMMTDDEVRGVLGHELGHVALGHTKKAMQVAYTATAARGAAAAA      180
181      GNGAVAALSQSQLGELGEKLINAQFSQSQESAADDYSFDLLTKNKANTRGLVTAFQKLAK      240
241      LDGGKSGMFSSHPGSEDRAKHIEQRISKAS                                    270

>MER0208683 - family S33 non-peptidase homologues [S33.UNW] peptidase unit: 18-303 ( active site residue(s): 114,254,281  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MNAPQSLPPQVFPRQCFIHAGDVRLCATSWGEPGPGRPTIVLVHGYPDSSEVWHDVAAQL       60
61       AGRFHVVAYDVRGAGRSTAPRATDAYRLQKLADDFIAVIDAVSPQRPVHLVGHDWGSIQS      120
121      WEFVTDARLQGRIASFTSCSGPCLDHAAIGLRELRGQRSLAALGKTLRQLAASWYIGAFH      180
181      LPWLPELTWRLWLGRAWPRYLRLTEGLRTGPSPTQTADGCHGVRLYRANFVPVLRAPRHC      240
241      HAHAPVQVIVPLHDRYVKPALTEDVHRWTTQLWRRTVPAHHWLPLADAQGFAIMVREFVE      300
301      HMEGEPASPALLAARLR                                                 317

>MER0210615 - family S33 non-peptidase homologues [S33.UNW] peptidase unit: 23-278 ( active site residue(s): 99,228,256  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MDAPDSAPAGPASPPFASHPARGALPGWRETGQGRPLLLLHGWSVTGEAFDGQRALALAG       60
61       FRVIAPDHAGHGLSRERDGTTITALARDVAGLVAHLGLTDVVVAGWSMGAMVAWALLRDH      120
121      PGLPLAAVGSIDMTPRLVTDAAWPHGLHGHYEIAHAAQMAARIRADWTRLAPSVALGMWS      180
181      AGRRPEDAAMQRIAHMAGQCDAWALAALWEDMARQDFRETLRGAGLPLFHLYGEASRLYA      240
241      PAVGTATLALRPGAGFSVVAGAGHSPHMEQPQAFNAALLGLIARAASGQQAVSPEAERGQ      300
301      QQ                                                                302

>MER0094599 - lysostaphin [M23.004]  ( metal ligand(s): 0,0,0 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MHNIVKSQYFARAGQLFAASALTALLAACANSPMPAPVVDRTSTSGTTAATLEPAPPGYY       60
61       RVKRGDTLYRIALENGQSYRDVATWNNLTNVNQIEVGQLLRIVPPGADVNIAPGVATMPV      120
121      APGTVQAQPIDQARPAATPVPPAAAASAPAATPAAPAAAAAPVTDGSMKLAWPATGQTVG      180
181      KFDDKGNKGIDIAGKKGDAVLAADDGRVIHVGPLRGYGNLVIIKHNETFLTAYGHNDKVL      240
241      VAEQSAVRKGQKIAEMGNSDTDRVKLHFEVRKNGKPVDPMRYLPPQ                    286

>MER0094600 - FtsH peptidase [M41.001] peptidase unit: 364-627 ( active site residue(s): 417 metal ligand(s): 416,420,492 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MNNNLFQKAAIWLVIALVLFTVFKQFDKPRAQDSVTYSQFMDDAKNGKVSRVDVQGRNLV       60
61       VSPKEGAKYTIISPGDIWMVGDLMKYGVQVTGKADDEPNVLVQALYYLGPTLLIIVFWFY      120
121      MMRQMQGGGKGGAFSFGKSRARLIDENQNAVTFQDVAGCDESKEEVVELVDFLKDPQKFQ      180
181      KLGGRIPRGVLLVGPPGTGKTLLARAIAGEAKVPFFSISGSDFVEMFVGVGAARVRDMFE      240
241      NAKKQAPCIVFIDEIDAVGRHRGAGMGGGNDEREQTLNQMLVEMDGFEANSGVIVIAATN      300
301      RADVLDKALLRPGRFDRQVYVGLPDIRGREQILKVHMRKVPIGNDVDASIIARGTPGFSG      360
361      ADLANLVNEAALFAARRSKRVVDMQDFEDAKDKIYMGPERKSTVMREEERRATAYHESGH      420
421      AVVAKLLPKADPVHKVTIMPRGWALGVTWQLPEHDKYSKYKDSMLEEVAILFGGRAAEEV      480
481      FLNAMSTGASNDFERATKLARDMVTRFGMSDSLGAMVYVDTEQDGMFGKLSSKTVSEATQ      540
541      QKVDAEIRRIIDEQYALAKRLLEENRDKVEAMTNALMEWETIDADQVNDIMAGKPPRPPR      600
601      SASGPNGGGSTPPGGSPVAPTNAPATA                                       627

>MER0091778 - signal peptidase I [S26.001] peptidase unit: 91-299 ( active site residue(s): 104,159  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MNFALILFVLVVITGVAWVADKLVFERQRRSSARLALAEFDSRQADLQGRFGAAEADATR       60
61       KRLAEEKLRQPWWLEYSASFFPVILAVFVLRSFVVEPFKIPSGSMIPTLLIGDFILVNKY      120
121      EYGIRLPVVNKKVMDMGEPQRGDVMVFRYPKDPSLDYIKRVIGVPGDVVQYANKRLTING      180
181      KPAEYAALPDFLDEERLAYSRHFREKLPGSVDHGILNDADRPAFIAGADPDFPYRENCTY      240
241      NQQGVTCKVPAGHYFVMGDNRDNSLDSRFWGFVPDENIVGKAFVIWMNLGNFGRVGTFK       299

>MER0063210 - subfamily S49B unassigned peptidases [S49.UPB] peptidase unit: 90-375 ( active site residue(s): 221  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MTEQQKPPSGESGQPDEHKPAGDGAPGEGAPQAESERLVTAPRADYPLEDELRAGDDAAR       60
61       REARERKARMAGATAGPPVGGGAGWERDLLEKVLTASLREQRAARRWRIFFRFVGLALLA      120
121      LILVTLFDFKGDGAISTSGRHTAMVTLEGEIAAGTPASAESINASLQAAFADGNAAGVIL      180
181      KINSPGGSPVQAGIINDEIQRLRTLYPSKPFYVVVEEICASGGYYVAAAADKIYVDKASI      240
241      VGSIGVLMDGFGFTGLMDKLGVERRLYTSGANKGMLDPFSPQVPKQKAFAEAMLKQIHQQ      300
301      FIDVVKEGRGDRLKDDPELFSGLFWSGERAVELGLADGLGSADYVARDVLKAEDIVDYTV      360
361      KENIAERVAKRFGAAVGSAAMKTMLWSNRMQGMH                                394

>MER0094603 - amidophosphoribosyltransferase precursor [C44.001] peptidase unit: 2-253 ( active site residue(s): 2  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MCGIVGVVSATPVNQLIYDSLLLLQHRGQDAAGIATANGSTFHMHKANGLVRDVFRTRNM       60
61       RSLPGAAGIGQVRYPTAGSASSEEEAQPFYVNAPYGVILAHNGNLTNWEQLREEMFRRDR      120
121      RHINTHSDTEVLLNVLADELQRASNGMALDPDTIFTAVSGLHRRVRGSYAIAAQIAGYGM      180
181      LAVRDPFGIRPLCLGSVETPTGKEWMVASESVALEGIGYKLERDVAPGEAIFIDLDGKLY      240
241      SKQCAENAVLTPCIFEYVYLARPDSCIDGVPVYDARLRMGDYLAEKIRQEVSAGDVDVVM      300
301      PIPDSSRPAAMQVANRLGVNYREGFFKNRYVGRTFIMPGQAVRKKSVRQKLNAMGVEFKG      360
361      KNVLIVDDSIVRGTTSFEIVQMARDAGANKVIFASAAPPVKYPNVYGIDMPTRSELVAHN      420
421      RTHEEIAKIIGADKLVYQDVEAMKQAVRDINPALKDFDASCFDGRYITGDIDEAYLNRLE      480
481      TARSQADRDGTNGDTERSQLHLQRSGGNE                                     509

>MER0094606 - Mername-AA052 peptidase [M48.008] peptidase unit: 141-415 ( active site residue(s): 276 metal ligand(s): 275,279,357 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MFTIVFLAALVLMVLTRLWLAARQVRHVAQHRNAVPPRFADTISLASHQKAADYTIARTR       60
61       LSMLEVLAGAAVLIGFTMLGGLQWLNQSWLDTFGPGYAYGVALVASVALIGGLVDLPFSL      120
121      YGQFGIEQRFGFNKMTFGLWLADMAKMLVVACALGLPLLLAVLWLMERAGSLWWVWTWLV      180
181      WMAFNLFLLVVFPTFIAPLFNKFEPLTDESLRQRIEALMKRCGFASKGLFVMDGSKRSAH      240
241      GNAYFTGFGAAKRIVFFDTLLERLSGDEIEAVLAHELGHFKRRHVTKRIVVTFALSLVFL      300
301      ALLGWLATRSWFYTGLGVVPNLGVSNNALALVLFFLALPVFTFLLGPLSSLSSRRHEFEA      360
361      DAFAADQTDAGNLVSALVKLYKDNASTLTPDPLYSAFYYSHPPAAQRIDRLLAHA           415

>MER0094608 - archaean signal peptide peptidase 1 [S49.005] peptidase unit: 68-248 ( active site residue(s): 120,139  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MSGRLLAGLALACGAVALAGPGARAAPPSGASAPAATVTTTATAPVYVIPLKGAVSPASA       60
61       SFILRSMERARAGGAQLVVLEMDTPGGLDASMREIIQAILASPIPVASYVYPGGARAASA      120
121      GTYILYASHIAAMAPGTNLGAATPVQVGIGGPQKPEALPGAKPASTPASEPARADAMERK      180
181      QMHDASAYIRGLAQLRGRNAEWAERAVRESVSLSADEALAQRVVDLVAPDLPALLRQVEG      240
241      RTITAAGGKAGVLHTANAPVVTLEPDWRNRFLAVITEPSVALLLLMIGIYGLIFEFSTPG      300
301      MVVPGIAGAICLLVALFALHMLPVNYAGLALVALGIGCMVAELFLPSFGALGVGGIIAFA      360
361      FGAVMLIDTDVPGFGVPLPMVAAMSALSAIFVFGMSAMLVRSRKRPVVSGADTLVGARGE      420
421      MLDDLREEGWATVRGETWRVHSASSLPRGTPVVVTARKGLVLEVIAAGNAPLVPTTPPQP      480
481      TPDKGA                                                            486

>MER0094614 - subfamily M48C unassigned peptidases [M48.UPC] peptidase unit: 76-338 ( active site residue(s): 223 metal ligand(s): 222,226,274 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MIPVTFFDGRSSRAHPATLAVEAQQAVLRDDSGAELRRAPLSDVRVSERVRRAPRLVTFA       60
61       DGAFCEITDHAAFDHLLAATGHRDSLVARAQNSWRLAGLAVAGLVAVLVLGYYVLLPWGA      120
121      GIMARTVPPEVEAHLGKLTLASLDNGMVKPTQLPPAEQQRIRSAFAALKRPRDAGHDYQI      180
181      LFRQGGEIGANALALPGGTIVVTDELVSLAGTGAGMMGVLAHEAGHVANRHGMQQVIQGS      240
241      ALAALSAYLFGDISTVLAGVPAAILTLRYSRDHEREADAFAIEVMQRNGLPPAALAEVLV      300
301      RLDNRRGAASDAEPERGQDFMSTHPQTQARIDALRRAGK                           339

>MER0092210 - PepA aminopeptidase [M17.003] peptidase unit: 149-512 ( active site residue(s): 296,370 metal ligand(s): 284,289,307,366,368 ) (Cupriavidus necator) (Source: UniProt Q0K7F5) 
1        MEFSTKALDWSKAGQNGFLATKTDCLVVGLFEGQNLAGVAKALDVATKGLVGRLVKQGDF       60
61       EGKRGTQLMLHEVAGVGAARVLLVGLGKEADFSDKAFADAVRTAVRALSSTRAASALWCL      120
121      AQQAPQQRDVAWAVITTITLVREAGYRLLERHPGLKRANANGKPNGNDKSSLRKVVIAVD      180
181      TGNARAATQAVVRGTAIANGMELTRDLGNLPSNICTPTYLANTARGIAKRHKLKAEVLGR      240
241      KQIEALNMGAFLAVTKGSEEPPQFIVLRYDGAGAKQAPVVLVGKGITFDTGGISLKPGEG      300
301      MDEMKYDMCGAASVLGTIQAVAEMGLKLNVIAVVPTCENMPSGIATKPGDVVTSMSGQTI      360
361      EILNTDAEGRLILCDALTYVERFKPAAVIDVATLTGACIIALGHINSGLYARSDALADAL      420
421      LQAGRRAMDTAWRMPLDDEYQDQLKSNFADMGNIGGRPAGSVTAACFLSRFTEKYDWAHL      480
481      DIAGTAWKSGAAKGATGRPVPLLAQFLMDRAA                                  512

>MER0094616 - subfamily M48C unassigned peptidases [M48.UPC] peptidase unit: 75-247 ( active site residue(s): 128 metal ligand(s): 127,131,187 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MKRLALSALACSALLAGCAGANMESLTQAGGSLFTAATLSDSNVKMLSDQSCAEMDQKNT       60
61       IAPADSTYAKRLANVMSGLGNTGLPLNAKVYVTKDVNAWAMANGCVRVYSGLMDLLSDDE      120
121      VRGVVGHEIGHVSLGHTKAAMQVAYTTAAARGLLGSTGVASLTALSSSQIGALAEQFVNA      180
181      QFSQRQETAADDYSFDLLTKNGANRQALASAFRKMSTLDGGQSSMLSSHPGSLERAKHIE      240
241      ARLAGGR                                                           247

>MER0214924 - YqiA protein ({Escherichi coli}) [S09.A40] peptidase unit: 3-173 ( active site residue(s): 70,148,173  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MLLYLHGFRSSPQSFKARLVQERMREWGVGRYYACPTLNVSPEMAIAQAQAAIRAAQAGG       60
61       DQEIAIVGSSLGGFYARWLGERHGCRTVLLNPAIHPWTDLEAYLGEQPLWHGGGSVTVER      120
121      RHLQELLDLRVDTITDPGRYYLLAATGDEVLDYREMVAACPGANIRVIEGSDHGISEFAD      180
181      YVDDVLAFCGYGPGGKVPAGTGPA                                          204

>MER0091777 - type 4 prepilin peptidase 1 [A24.001] peptidase unit: 68-300 ( active site residue(s): 167,231  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MLSSWSASPYPSPASTGGAPLVEALAALPPAFLVAAAALLGLVVGSFLNVVIHRMPRMME       60
61       RDEANYIAELRGDPLPYPGRYNLMVPRSACPHCGHAIAPWENVPVLSYLFLRGRCSACQA      120
121      PISVRYPLVELACGVLSALAAWRFGPGGQALAALVLVWALLALTMIDADTQLLPDQITLP      180
181      LLWLGLLLNLGGVFVTLPDAVIGAAAGYLVLWTAYWLFRLVRGKEGMGFGDFKLMAALGA      240
241      WLGWQALPALVLLSSVVGVLFGLANIALRRQERDTPFPFGPFIALAGVVVLLFGPGVLPL      300
301      FAWP                                                              304

>MER0094621 - ornithine acetyltransferase precursor [T05.001] peptidase unit: 193-408 ( active site residue(s): 193  ) (Cupriavidus necator) (Source: UniProt Q46X04) 
1        MPVNLPLPQAENLKSVAGVELGWAEAGIRKANRKDVLVVRVAEGSTVAGVFTSNRFCAAP       60
61       VQVCREHLAAGKGIRALVVNTGNANAGTGEPGLASARASCDALAAQLGIAAEQVLPFSTG      120
121      VILEPLPVDRLVAGLPAAIANAKPDNWLAAAEAIMTTDTQPKAASRTVQIDGKTVTLSGI      180
181      SKGAGMIRPNMATMLGFIAMDAAVAQPVLQALVSYAADHSFNSITIDGDTSTNDSFVLIA      240
241      TGKSGAVVERAEGPAFEALRDAVTALAQELAQMIVRDGEGATKLMTIRVEGGKDVAECRQ      300
301      IAYAVAHSPLVKTAFYASDPNLGRILAAVGYAGVDDLDVGRVNLWLDDVWVARDGGRNPD      360
361      YREEDGQRVMKQAEITVRIALGRGKAEATVWTCDLSHDYVSINADYRS                  408

>MER0092103 - family M20D unassigned peptidases [M20.UPD] peptidase unit: 1-394 ( active site residue(s): 78,135 metal ligand(s): 76,104,136,368 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MKLIPEILQAQAEIRAIRRDIHAHPELCFEEQRTADVVAQNLESWGIEVHRGLGTTGLVG       60
61       VIRNGNSPRTIGLRADMDALPLQEANTFDHRSQHTGKMHACGHDGHTAMLLGAARYLAQH      120
121      KPFDGTVHLVFQPAEEGGGGAREMIKDGLFERFPCDAVFGVHNWPGMPVGAFGTRAGPLM      180
181      ASSNEFRIVVRGKGAHAAMPNNGNDPVFTAAQIVSALQGIITRNKRPIDTAVISVTQFHA      240
241      GDATNIVPDQAWIGGTVRTFTVPVLDLIERRMEEVARAVAAAFDCTIEYEFHRNYPPTIN      300
301      SEAETGFAAAVAAELVGADNVDSNVEPTMGAEDFSFMLQHKPGCYLFLGNGDGGHRDAGH      360
361      GIGPCMLHNPSYDFNDELLPVGSTFFVRLVEKWLAPA                             397

>MER0094622 - aminodeoxychorismate synthase, subunit II [C26.955] peptidase unit: 24-189 ( active site residue(s): 79,168,170  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MLLMIDNYDSFTYNLVQYFGELGEDVRTYRNDEITIEEIEALKPDHICVSPGPCSPKEAG       60
61       ISVAALQHFAGKIPLLGVCLGHQAIGEAFGGKVIRAKQVMHGKVSTIETTQQGVFAGLPR      120
121      HFDVTRYHSLAIERETLPDCLEITAWTPDGEIMGVRHKTLAVEGVQFHPESILSEHGHAL      180
181      LANFVKAPR                                                         189

>MER0094623 - family M61 unassigned peptidases [M61.UPW] peptidase unit: 1-604 ( active site residue(s): 295 metal ligand(s): 294,298,328 ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MTPIRYAIAPLQPEAHLFAVTVTVSEPDPAGQCFSLPAWIPGSYMIRDFARNIVRIRADA       60
61       GGREVRLTKLDKQRWQAAPVSLADGPLTLSYEVYAWDLSVRAAHLDTTHGFFNGSSVFLC      120
121      VDGQAERPCTIDIHAPAGEAYRGWRVATAMREAPGRAGAKRYGFGRYQVADYDELVDHPV      180
181      EMGTFQLASFRACGAQHDVVFTGRVPQLDLERVCRDLKRICEAQIRLFEPKTAQAPFLDS      240
241      NRRYVFMTMVTSDGYGGLEHRASTALICARNDLPVRGDSDTSEGYRTFLGLCSHEYFHTW      300
301      NVKRIKPAAFVPYRLAEETYTPLLWLFEGFTSYYDDLVLVRSGCITDEQYIEMLAKTWNG      360
361      VLRGSGRTKQSVAESSFDAWTKYYRQDENAPNAIVSYYTKGSLVALALDLTIRDKTRGRR      420
421      SLDDVMRALWRRYGRGFYAPGAVQRGVTEAEVHALFDEVTGLRMGPLLRSLTEGTGELPL      480
481      PALFKTFGVKADAQKPARTAALGIKVKSDEGWVRVAQVFDGGAAQAAGLSAGDLLVAIDG      540
541      LRVAPGQIDKLLARYRSGDRIELHAFRRDELQVLPVTLAREPAAQFKVKLESGRHAARSR      600
601      WLGQ                                                              604

>MER0094625 - family C26 unassigned peptidases [C26.UPW] peptidase unit: 1-207 ( active site residue(s): 72,187,189  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MGNLRSVAQALRAAAPEADVRVVDAPEGIRSADRVVLPGQGAMPDCMSALGASGLQEAVV       60
61       QAAASKPMLGVCVGEQMLFEFSTESRAGADRTPALGLMPGQVVRFALDGMTQPDGSRYKV      120
121      PQMGWNRVRQARPHPLWDGIPDDSWFYFVHSYYVQAQDPAHVAGETEYGVVFTSAVARDN      180
181      IFATQFHPEKSAALGLQLYRNFVHWKP                                       207

>MER0094626 - glutamate synthase (NADPH) large chain [C44.003] peptidase unit: 43-419 ( active site residue(s): 43  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MDQTKNLSAQAQAQAQTSESSHAIDLRPQAQGMYDPSNEHDACGVGMVAHIKGKKSHEII       60
61       SQGLKILENLDHRGAVGADALMGDGAGILIQIPDQFYREEMAAQGVSLPPAGEYGVGMIF      120
121      LPKEHASRLACEQELERTVRLEGQVVLGWRDVPVDAKMPMSPTVRTTEPVIRQIFIGRGR      180
181      DIMTTDALERKLYVIRKTASHAIQALKLKHGKEYFVPSMSARTVVYKGLLLANQVGEYYL      240
241      DLLDQRAVSALALVHQRFSTNTFPAWELAHPYRMVAHNGEINTVKGNVNWINARTGAISS      300
301      PVLGDDLPKLWPLIYPGQSDTASFDNCLELLTMAGYPLVHAMMMMIPEAWEQHTLMDDNR      360
361      RAFYEYHAAMMEPWDGPAAICFTDGRQIGATLDRNGLRPARFYVTEDDIVVLASEAGVLP      420
421      FPESRIVEKWRLQPGKMFLIDMEQGRIIDDKELKDNLANAKPYKSWIDAVRIKLDELDAK      480
481      PEDVAAEKKPVAKLLDRQQAFGYTQEDVKFLMAPMALAGEEATGSMGNDSPLAILSSKNK      540
541      TLYHYFKQLFAQVTNPPIDPIRENMVMSLVSFIGPKPNLLELNNINPPMRLEVSQPVLDF      600
601      KDIAKIRNIEHYTGGKFRSYELNICYPKAWGKEGIEARLASLCAEAVDAVRSGFNILIVS      660
661      DRRVDAEHVAIPALLATSAIHHHLVEKGLRTSTGLVVETGTAREVHHFALLAGYGAEAVH      720
721      PYLAMETLAEMAQGLSGDLSPEKAVKNFVKAIGKGLFKVMSKMGISTYMSYTGAQIFEAI      780
781      GLSRELVQKYFHGTPSNVEGIGIFEVAEEALRLHRDAFGDNPVLESMLDAGGEYAFRIRG      840
841      EEHMWTPDSVAKLQHSVRADDGKGAYQTYKEYANIINDQSKRHMTLRGLFEFKVDPAKAI      900
901      PLEEVESAKEIVKRFATGAMSLGSISTEAHTTLALAMNRIGGKSNTGEGGEDEKRYRNEL      960
961      RGIPIKQGDTLKGLLGDNVIERDLELQEGDSLRSKIKQVASGRFGVTAEYLASADQIQIK     1020
1021     MAQGAKPGEGGQLPGHKVSDYIGKLRYSVPGVGLISPPPHHDIYSIEDLAQLIHDLKNVN     1080
1081     PVSDISVKLVSEVGVGTVAAGVAKAKADHVVIAGHDGGTGASPWSSIKHAGTPWELGLAE     1140
1141     TQQTLLLNGLRNRIRVQADGQMKTGRDVVIGALLGADEFGFATAPLVAEGCIMMRKCHLN     1200
1201     TCPVGVATQDPQLRRKFQGKPEHVVNFFFFVAEEAREIMAQLGIRKFDELIGRADLLDTK     1260
1261     PGIEHWKARGLDFGRIFHQVSLGADVPLYHTDVQDHGLSAEAGKALDHVLIAKARPAIEK     1320
1321     GERVSFIQPVKNVNRTVGAMLSGVVARQHGHEGLPDDTIHIQLQGTAGQSFGAFLAHGIT     1380
1381     LDLVGDGNDYVGKGLSGGRVIVRAPHEFRGDPTRNIIVGNTVLYGAIAGEAFFNGVAGER     1440
1441     FAVRNSGAVAVVEGTGDHGCEYMTGGTVVVLGGTGRNFAAGMSGGVAYVYDEDGLFDKRC     1500
1501     NTSMVALEAVLASADQEKGQPEASWHKVDGKRQLDEVILRNLIEQHFRYTGSERAKALLA     1560
1561     DWTTARRKFVKVFPTEYKRALGEMYAKEQAARDSDREAIAA                        1601

>MER0094628 - family M20 non-peptidase homologues [M20.UNW] peptidase unit: 3-414 (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MAANPSPSAAETGTRIMAWADALAVHTEQPGMLTRTYLTEAHHGAAAQLTEWMQQAGMTV       60
61       RRDAAGNVIGRYEGTSPDAPALLTGSHFDTVRDGGRYDGNLGVILPIACVAEWNRQGKRF      120
121      PFAIEVVGFAEEEGVRFKATLLGSRAIAGTFDNNVLDNVDDSGKTMRQVMREAGFDAAAL      180
181      PAARHDSSKVAAFIEVHIEQGPVLLNENLPVGVVTAISGATRFIVELEGLAGHAGTVPMD      240
241      MRRDAAMAGAEIGLYIEKRCGGKPGLVGTVGQFNVPNGAANVVPGRAVFSIDIRAGADAE      300
301      REAAVNDVLAEIERVCARRNVRTQVRKTHEAKSVPCAPWLQEQWAAAIARQGVPVRHLPS      360
361      GAGHDAMAIAAIADVAMLFVRCGNGGISHHPTETMTAEDAALSARVFSDFVEHFRLPQ        418

>MER0094630 - subfamily S9C unassigned peptidases [S09.UPC] peptidase unit: 29-284 ( active site residue(s): 159,230,259  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MPAIAPAPAPARLVSPRTESVRRRVLRWLGAGLVLLAGISMMQDHFLYFPDKASVDAMVS       60
61       PGLRAWPGPQDFRGLVAEPAGPARATAMVFHGNAGHAGHRGYYASALTKLGLRVILAEYP      120
121      AYGPRTGALGERSFVADAEQSIALARRQFGGPLLLVGESLGAGVAAAAAARQRESVAGVL      180
181      LITPWDKLAHIASHHYPWLPAGWVLRDRYDSAANLEGFGRPVMVAVAERDTIVPARFGQA      240
241      LYASLGEPRRLAVIGGAGHNDWAGHVDTAWWQEAVAFLLSSPPTTNK                   287

>MER0094634 - family S33 unassigned peptidases [S33.UPW] peptidase unit: 47-317 ( active site residue(s): 147,271,299  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008313) 
1        MNRLAIEQDAALLAPPGALTRWFGQGRVGLFSLSRATLAQRHALPASRWVRVLDAMVHYT       60
61       DEGPADGETLVLIHGFGASLHTWQGIVPALAQRYRVLRLDLAPFGLTGPLRDARGRIETM      120
121      DVHRYRDFIDAFLAAVNVRRASIIGNSLGGLIGWDLAVRRPDAVDKLVLIDAAGFQMRLP      180
181      IYIDLFRHAPVRWSAPWMLPEFIIRAATRDVYGDASRVPESTFRRYVDFFYAEGSREAVG      240
241      KMVPRLDFAQLDTHLLGSVRAPTLVLWGERDRWIPPAHAQAFTERIPGAQLRRYAGLGHV      300
301      PMEEDPQRVAADLLPFLAAQ                                              320

>MER0253150 - FlhB protein ({Escherichia coli}) [N06.A01] peptidase unit: 8-347 ( active site residue(s): 269  ) (Cupriavidus necator) (Source: EMBL nucleotide NC_008314) 
1        MSEESDLEKTEPASPRRLEKAREEGQVVRSRELATFVMLIAGVTGLWTLGGHLGRSLNQV       60
61       MQGALRFEPATAFDTSRMLSRFAMMVWDSLLAFLPLLFLFGVAALAAPLLLGGWVFSGKS      120
121      FAPQFSRLSPLAGLGRMFSAHSLVELLKAVAKSLLVGSVGAWVLWRRLPEAIALMNAPVQ      180
181      EALLHMVDLVMYCCLVVSLSLLVVAAIDVPWQYWEFFKKLRMTKEEVKQEFKESEGDPHI      240
241      KGRIRQQQRAMARRRMMTEVPKADVVVTNPTHFAVALRYEEGRMGAPRVVAKGTGDIAAR      300
301      IRELAAEHRVPLMSAPPLARALHRHVELGQEIPAGLYTAVAEVLAWVYQLKHWHYSQGPQ      360
361      PQAPADLPVPDELAVPEMRE                                              380

>MER0094334 - family M16 non-peptidase homologues [M16.UNW] peptidase unit: 502-706 (Cupriavidus necator) (Source: EMBL nucleotide NC_008314) 
1        MRRTALHLSLLASLACAPALAQPVQTAPTTTPAMATQVASVEGITEYRLPNGLRIVLAPD       60
61       AAKATTTVNITYLVGSRHENYGETGMAHLLEHLLFKGTPSLPGKTIPTEFARRGMSVNGT      120
121      TAQDRTNYFGTFSANDENLDWALRMEADRMVNSVISRADLDSEMTVVRNEMEMGENSPGR      180
181      MLMQQTMAAAYRWHNYGKAPIGARSDVEHVSIDGLRAFYRRYYQPDNAVLVVAGKFDPAA      240
241      TLARIERYFGPIPRPTRVLPPEHTVEPAQEGARELVVMRPGDNSLVAAQYHVSPGAHPDS      300
301      TALSLLTLILGDTPGGRLYKALVERGQAVSVGTALYAMKDPGALLLMVETSKDQPLAAAR      360
361      AGLITQVEGFAEAPVTEAELERARVRMRNAYEHYMNDPGALGVALSEAIAKGDWRLFFLA      420
421      RDRIETTTLADVQRVALNYLQASNRTVGVFLPAEQPSRAQVPPAPDVTAMVSGYQGRQAM      480
481      AAVAAFDPSPANIEAHTTRQTLANGMQLALLPKPARGEVVHGALVLRIGDTQSLQGLTTV      540
541      GALTASMLRRGAAGMDRQQIADRIEALRARVGISGSSERVTVSFETRRAHLPELLALLRD      600
601      LLRAPTFPEAEFETLRKTSIAEIESIRREPGVMASNALGRHGDPYPAGDPRHARTFAENI      660
661      ADLQAATLAQVRDFHARFYGAGHAQLSLVGDFDAAAAAAQAAQLFGDWSAQQPYARVERP      720
721      FVPIPPAEFTLPAPGKANAIYLASTPIDLTNDAPDYALMMIANRVLGGASLRGRLADRLR      780
781      QREGLSYGASSWVQVGALDRAGRFGLQAQYAPQNLPRLQRAVTEELERFVRDGITAQELA      840
841      EAVSGLLQQGMVSRSNDAALAGALANQLYLGRTMAFTAELEERLRNATPDAVNAAIRRYM      900
901      QPGTLSRVYAGDFSGAPAQAGATGSGSGSGAAGSTGNEAAGAAPQAQP                  948

>MER0052530 - family M20 unassigned peptidases [M20.UPW] peptidase unit: 20-401 (Cupriavidus necator) (Source: EMBL nucleotide NZ_AADY01000001) 
1        MQADTQRQSSATEANAPRGSAIEWTQRLVAYDTTSRHSNLGLIESVRDHFLAKGLRPHLS       60
61       YNPQQDKANLFVTVPAASGDTNGGIVLSGHTDVVPVDGQNWTTDPFKPVVRDGKLYGRGT      120
121      CDMKGFIGTSLALLPTLLDAKLREPVHYALSFDEEIGCMGAPYLLAELRERGVRPAGCIV      180
181      GEPTSMRVIVAHKGINAYRCCVKGHAAHSSLTPRGVNAIEYAARLICFIRDIADEFKANG      240
241      PYDKAFDVPYTTAQTGTIQGGIALNTIPALCEFVFEFRNLPGVDPEALFARIQSYANDVL      300
301      LPKMRAEHADAGLVISKIAAAPSLDAAEQEAITQLVRALTGDRETSKVAYGTEAGLFQRA      360
361      GIPAVVCGPGDIEQAHKPDEFVALDQLVACEAFLRKVVDSLRVA                      404

>MER0285758 - subfamily M20A unassigned peptidases [M20.UPA] peptidase unit: 4-352 ( active site residue(s): 48,109 metal ligand(s): 46,75,110,134,326 ) (Cupriavidus necator) (Source: EMBL nucleotide NZ_AMPR01000005) 
1        MAAYAERRLAALGATTERVKPKSGDSPIVKGTLTGNGKARIMLIAHMDTIYPPNTLATQP       60
61       IRQDGNKLYGPGIADDKGGIAVILHALEILQASGWRDYARITVLLNADEEIGSEGSGELI      120
121      AALGEQHDVVLSCEPTAAKAVVKAEALLLGASGTASATMEVKGRAAHAGAAPEHGRNALL      180
181      ELAHQLQQTRDIAKSVPGTQLNWTGAQAGVVRNQIPEVAVATADVRTTVKDGPQKLKAAL      240
241      ERKVAESRLVPDTHTTVSMEEGRPPFVVNEKGRALAKRAQQIYAELDGRQLALAEGTGGG      300
301      TDAGYAALSGKPAVVESFGLAGFGYHARDEYIEIDSIVPRLYLMTRMLQEIGRQ            354

>MER0267459 - family U69 unassigned peptidases [U69.UPW] peptidase unit: 1097-1153 (Cupriavidus necator) (Source: EMBL nucleotide NZ_AMPR01000035) 
1        MTGSNWSTNAVPSGSNVTINQQANSAVLGVSGPAAATIGTLQMGTAAGTSALTIQNGSRL       60
61       SSSVTVGGNSLGQVAGSNATVTVTGAGSEWSTAIVTIIGAGTNSTGTLNIADGATASLAG      120
121      LNFGQSGVAGTAVLNVTGGSVLSSNNATMYAIGTGSSTANISGTGSRWNVGGNLIVGRSQ      180
181      GGGGVGSGTLNVHSGGVVTATGNISIGGNNLSGTGPGSATVSGTGSQLNAGGTLSIGSYG      240
241      RGALTIADDAVASAGTVTMTSMAASQGTLSISNGGTLATGALTAGPGAVQADFDRAILRA      300
301      TGNSGAFVSGFTGTELNVAAGGLTLDTGGFNVTVASPFSGAGSLTKTGAGTAVLTDNNTY      360
361      TGGTTISAGTLQLGNGGTSGGIAGDVTNNGTLAFNRSDTAIHDGTISGSGAVSQIGTGTT      420
421      ILTGNHTYTGGTTISAGTLQLGNGGASGSIGGDVANNGTLAFDRSDTYTYGGQISGNGAV      480
481      SQTGTGTTVLTGNNTYTGGTSISGGTLQIASDINLGNAAGSLSLDGGTLRNTTNLTSART      540
541      VTLNAGGGTFQTTGDLTLTGVIAGSGSLGKTDVGTLVLTGDSTYAAGTTVSAGTLQLGNG      600
601      GTSGSITGNVTNNGALVFNRSDSVTFGGAISGSGSVTQAGAGTTVLTGANSYSGTTTVQA      660
661      GTLLVDGNQAGATGATTVQGGATLGGTGTLGGSVTLANGATLSPGATGAVGALTVNGNLS      720
721      LASGAALDYQFGQANTPGGPLNDLTVVNGNLALDGVLNVSVSPGGSFDPGVYRIFNYAGT      780
781      LANSGLSIGAGPAGTYYVQTSVANQVNLVNNTGITLNFWNGAGSPNSGAIHGGDGTWQGM      840
841      AGKDNWADSTGNSSGPYAGGAFAVFAAAPGTVTVDNSLGHVTTSGMQFASSGYTITGDAL      900
901      TLSGGTNVIRVGDGTAAGQGMTATIRTELGGAGTLQKTDLGTLVLDGNNTYGGGTHIQAG      960
961      TLSISRDANLGAAGSGLSIGDGTLRTTATMTSDRSVALTGAGSVLTDAGTTLTLTGGMAG     1020
1021     AGGLTKAGAGTLLLRGADTHTGATQISGGTLAAGAAQVLSAASAYTVGSGATLAINGFQQ     1080
1081     TVGALTNAGTVSLDGNGSALTVAGNYTGAGGTVQLRAALGGDNSVTDRLVVQGDTSGTTT     1140
1141     LKVSNVGGAGAQTVNGIKLVDVAGQSTGNFALQGDYTMQGQQAVIGGAYAYTLRKNGIST     1200
1201     PADGDWYLRSSLLNPTVAPASPLYQPGAPVYEAYSQVLLAMNELPTLHQRVGSRYWADGQ     1260
1261     STAPASTHTGSDGGVGRQGAGWARVEGRHLAVGSGHSSTGTQWDLDQVKAQAGFDALLVE     1320
1321     NASGRLFAGIGTQYSRGSAGVNSFFGNGRIRVDGYGLSGTATWSGASGFYVDGQAQATWY     1380
1381     DSDLTSGTLGRRLSSDNKGFGRAFSIESGQRLAVSDAWSVTPQAQLVYSSISFDGFTDPF     1440
1441     GARVNRDKADSLTSRLGVALDYTTKWQDPAGHAARANVYGIANLYYDFRGGTTVNVSDAM     1500
1501     LSTRKDRLWAGLGVGGAVTWKDDRFGLYGELLVRSSLEGSGSGHDYRANVGVRVRW         1556

>MER0315836 - PepA aminopeptidase [M17.003] peptidase unit: 190-505 ( active site residue(s): 293,367 metal ligand(s): 281,286,304,363,365 ) (Cupriavidus necator) (Source: EMBL nucleotide NZ_AMPR01000095) 
1        MSKAGQNGFLATKTDCLVVGVFEGQSLDGVAKALDAATKGLVARLIKLGDFEGKRNSQLV       60
61       LHEVAGIGAARVLLVGLGKEAEFGDKAFADAVRTALRALSGTRAANVLWCLAQPAPRAAG      120
121      PGAEGATRDIGWRVITTVTLIREAGYRLLERHPELKRNGAKNNDKALGLRKVVLAVDAAE      180
181      AKAANQAVVRGVAIANGMELTKDLGNLPSNICTPTYLADTARSIARRFKLKVEVLGRKQI      240
241      EALKMGAFLAVTKGTAEPPQFIVLRYDGGGARQAPVVLVGKGITFDTGGISLKPGEGMDE      300
301      MKYDMCGAASVLGTLQAVAEMGLKLNVIAVVPTCENMPSGTATKPGDVVTSMSGQTIEIL      360
361      NTDAEGRLILCDALTYVERFKPAAVIDVATLTGACIIALGHVNSGLYARSDALADQLVQA      420
421      GRKAMDGAWRMPLDDEYQDQLKSNFADMANIGGRPAGSVTAACFLARFADKYDWAHLDIA      480
481      GTAWKSGAAKGATGRPVPLLTQFLMDRAG                                     509

>MER0401736 - subfamily M20A unassigned peptidases [M20.UPA] peptidase unit: 25-433 ( active site residue(s): 109,174 metal ligand(s): 107,140,175,207,405 ) (Cupriavidus necator) (Source: EMBL nucleotide NZ_AMPR01000115) 
1        MQDSASQLSTTDIAGAVRSLLPYMVETLSGFVAAASPSGQEQPAAEFIEAALRDLGLASE       60
61       RIELRADAIRHLPLFSPPCCPDGGRYNLLATHRPAAKGGRSVLFNGHLDVVPTGPESMWR      120
121      NPPYTPVVEDGWLYGRGSGDMKAGIVCALAAFKALRALGVQPAGAVGFNAVLEEENTGNG      180
181      ALATVAALRSAVGAGKLAAFDTVIIPEPLGEGLMSAQVGVYWMFIELTGKPAHAAYMTSG      240
241      VNPVEAGVAVMEDLRELEAEWNRPENRPPVYREHAHPINFNLGQIHGGEWNSSVPCTCTL      300
301      GVRIGFYPHMDIDETKAIVEARIRATVARLESNLELNIRYEGFHAPGCEFDLDVPSMQAL      360
361      AEAHRKVHGEPVKREATTATTDARHFRLMLDTPVTCYGPIARNIHGIDESVSLDSMVRVT      420
421      TTLAQFLHDWCGVEPIARA                                               439

>MER0406171 - family M20D unassigned peptidases [M20.UPD] peptidase unit: 6-394 ( active site residue(s): 78,135 metal ligand(s): 76,104,136,162,368 ) (Cupriavidus necator) (Source: EMBL nucleotide NZ_AMPR01000214) 
1        MTLIPEILQAQDEIRSIRRDIHAHPELRFEEQRTADVVARTLTDWGIEVHRGLGKTGLVG       60
61       VIRNGSSARSIGLRADMDALPLQEANTFGHRSQYEGKMHACGHDGHTAMLLGAARYLARH      120
121      RNFDGTVHLIFQPAEEGGGGAREMIRDGLFERFPCDAVFGMHNWPGMPAGSFGTCPGPLM      180
181      ASSNEFRIVVRGKGAHAAMPHNGNDPVFTAAQIVGALQGIITRNKRPIDAAVISVTQFHA      240
241      GDATNIVPNEAWIGGTVRTFTLPVLDLIERRMEEVARAVATAFDCTIEFSFDRNYPPTVN      300
301      SAAEAAFAVEVARELVGVDNVEANVEPTMGAEDFSFMLLERPGCYLFIGNGEGGHREAGH      360
361      GIGPCMLHNPSYDFNDEILPVGSTFFVKLVEKWLAPA                             397

>MER0266592 - family A8 unassigned peptidases [A08.UPW] peptidase unit: 34-165 ( active site residue(s): 126,153  ) (Cupriavidus necator) (Source: EMBL nucleotide NZ_AMPR01000218) 
1        MAATTRTARGRAASNKSRSGTPLLWLAFAALVVVLDQFFKIVIVRSFDYGESRPVTGFFN       60
61       LVLVYNKGAAFSFLADAGGWQRWFFTGLGLAVGAFIVWLLFRHAGQRLFSLAVSLVLGGA      120
121      IGNVIDRIVYGHVVDFLDFHLRGYHWPAFNVADCAITVGAVLLIVDEFRRVRRH            174

>MER0364484 - family M20 unassigned peptidases [M20.UPW] peptidase unit: 20-374 (Cupriavidus necator) (Source: EMBL nucleotide NZ_AMPR01000221) 
1        MQDREVAQGEQALLDWLQGQQQAMQDLLQKIVDIDSGSRHEAGVQAVAEALRAHLEAAGI       60
61       AVRFHAVPGYGVCLDAQVPGSGEGLPVLLMGHMDTVYPEGTAARRPFRVEDGRAYGPGVA      120
121      DMKSGLVLNVFVAEALARLGRQAPPVRLFFSCDEEIGSPATRERIMAVAREVRAVFNAEP      180
181      GRVSGNLVTGRKGSMVVEFEVEGVAAHSGINHAHGASAIDALARKILELHALTDPASGVT      240
241      TNVGCVQGGIVPNMVAPHAKAQLDVRFTAETDMDALYGRIRDIIEAESIPRTRGRITDMR      300
301      RTMPMATTPAFLLSLYQRSAERVGFTVDGEFTGGAADSGLTSSAGTPTLCGTGPVGGHPH      360
361      TEREYCELSTFVPRAQALALAVLGLR                                        386

>MER0094605 - microcin-processing peptidase 1 homologue [M103.950] peptidase unit: 63-434 ( active site residue(s): 265 metal ligand(s): 264,268 ) (Cupriavidus necator) (Source: EMBL nucleotide NZ_AMPR01000226) 
1        MSDLMTDQNVHFTYTQAQLSEMAADVLRVARELGATDAATEISEGSGLSVSVRKGEVETI       60
61       EQNRDKVVGVTVMIGKRRGNASTSDFSPAALRATAEAAYNIARFTAEDDCAGLAEEELLE      120
121      RDPLDLDLFHPWAIDAEQAIEIARRAEAAAFAVSPRIRNSDGASVSAQHSQFVLATTRGF      180
181      VGGYPYSRHFVSCAPIAGSGGGMQRDDWYSSKRAPEALAEPEAIGRYAAERALARLHARK      240
241      LSTRRCPVLFEAPLAAGLLGAFVQAVSGGALYRKSTFLYDTLGKPVFAPHIDIHERPHVP      300
301      GAMGSAPFDEEGVKTRARDVVRDGVVQGYFLSTYSARKLGMQTTGNAGGSHNLSLTSKLT      360
361      EPGDDFPAMLRKLGTGLLVTELMGQGVNYVTGDYSRGASGYWVENGVIQYPVEEITIAGN      420
421      MAEMFRQIVAIGADTLVRGTKETGSILIEQMTIAGN                              456

>MER0269039 - type 4 prepilin peptidase 1 [A24.001] peptidase unit: 66-291 ( active site residue(s): 164,228  ) (Cupriavidus necator) (Source: EMBL nucleotide NZ_AMPR01000246) 
1        MQGFLSNWNAAMPAGTWTIAALAALPPWFLLGAAALLGLVVGSFLNVVVHRLPRMMEREE       60
61       ANYLAALRHEPAPFPDRYDLVVPRSSCPHCGHAIAPWENIPVLGYLLLRGRCSSCRKPIG      120
121      LRYPAVELISAALCALAAWHFGPTWQALAALVLIWSLLSLALIDADTQLLPDQITQPLLW      180
181      LGLLLNMTGLFAPIGDAVIGAAAGYLLLWTTYWLFKLLRGKEGMGYGDFKLMAALGGWFG      240
241      WQALPALVLVSSVVGLVYGLAKIALRRHDRDTPFPFGPFIAGAGLLVLFAGADWLLPALA      300
301      PDIAIEAGAMQTH                                                     313

>MER0330805 - family S12 unassigned peptidases [S12.UPW] peptidase unit: 72-286 ( active site residue(s): 110,113,195  ) (Cupriavidus necator) (Source: EMBL nucleotide NZ_AMPR01000255) 
1        MPIAMKPSKLPFSRPFSRSSFLRACLFVCLSACLSVNANTYAADDGDALTSAAIAAIVDA       60
61       AVKPAIAQHRLPGMAVAVTVDGKRYFYNYGQTAMRGGRPVTKETLFEIGSVSKTFAATLA      120
121      AYAEASGKLSLQDPVSRHLPALRGGTFDKVTLLQLGTHTSGLPLAVPERIRSEPDMAEYL      180
181      SAWRPPYPVGTHRVYSNNGIGLLGAIAAARLGGAYSDLVHAIVFQPLGMKHSYFKVPAER      240
241      QADHAQGYTAADAPIRMKEGYLWEPAYGIRSSSGDLVAFVEANMSGARIDDTLRQAIART      300
301      HVPRFRAGPITQDLIWEQYRYPPTLQQLLAGNAAILRAEAATPIVAAPSEQPAYLHKTGS      360
361      TNGYSAYVAFVPDKRIGIVLLANKAYPVDQRVTIGYEILSRIAERAKR                  408

>MER0410163 - family M20 non-peptidase homologues [M20.UNW] peptidase unit: 82-419 (Cupriavidus necator) (Source: EMBL nucleotide NZ_AMPR01000342) 
1        MTARDNMNPMQTTLTNFIDAHRPAQEAFLAELVKVPSDNPPGDCDAHGARARQLLEGLGF       60
61       QVEAHKVPDELVKAAGMISAINLIVRKTFGNGGPTIAMNAHGDVVPPGLGWTKDPYGGEI      120
121      ADSEHGPVMYGRGVAVSKSDFATYTYAVLALMEAEKQGAKLNGTVELQFTYDEETGGDIG      180
181      PKFLLDQGLTKPDYAISAGFSYGITSAHNGCLHVEVTVKGKQGHAAMPHTGVDAIEAATH      240
241      ILQAVYGLRAELATRKSKVPGIDTATLNVGLIKGGINTNVVPDLVTFRIDRRMIPEEIGF      300
301      DAEGEIRAVVEKAAKDRPGIEVKVERIILAEPLSELPGVEKLIGALKSRAEEVFGVDIPV      360
361      HGVPLYTDARHYTSRGIPTVLYGAGPRTLMEARGHNSDENLRLNDLNRATKVVALALSDL      420
421      MS                                                                422

>MER0306828 - subfamily S41A unassigned peptidases [S41.UPA] peptidase unit: 199-378 ( active site residue(s): 314,339  ) (Cupriavidus necator) (Source: EMBL nucleotide NZ_AMPR01000420) 
1        MRKTLKNISLVSAGLVAGVLATLQLSATAQNSSGPLPLEQLRLMADIFGQIKREYVEPVD       60
61       DKKLLTEAIKGMVASLDPHSSYLDAKDFKELQEGTRGRFAGLGIEISQEEGLVKVINPIE      120
121      DTPAFRAGIQPGDLITRIDDKPVRGLPLEQAVKRMRGEPGTKVTLTIYRKSEERTFPVSI      180
181      TRAEIRVQSVKAKMVDPAIGWVRLTSFQERTVADLGRRLAELAQKNPNMKGLVLDLRNNG      240
241      GGVLQGAVGVSAAFLPEDVTVVSTNGQVPDAKRVYKTNFNNYRLSSVEDDPLKDLPPLFK      300
301      KIPMVVLTNAYSASASEIVAGALQDHKRAVIMGKTTFGKGSVQTVRPLTNDTGIKLTIAY      360
361      YYTPSGKSIQAKGIRPDIPVDQNPEGDPDDALITREIDTERHLHNKQESEEAEMTEREQR      420
421      RVEELRRLEEENAKKSPEEREKERRKKPIEFGTNDDFMLQQAIHQLKGEPIKRSRSKLEA      480
481      TPVSDSKVPKGPVKADPSRRAPAPDAKPAAPEGKPDSKPPASAPMGKPLGTPTGKAPERG      540
541      SERSLNA                                                           547

>MER0299033 - subfamily M48B unassigned peptidases [M48.UPB] peptidase unit: 70-283 ( active site residue(s): 132 metal ligand(s): 131,135,202 ) (Cupriavidus necator) (Source: EMBL nucleotide NZ_AMPR01000568) 
1        MFNWVKTFMLMAAITALFIVIGGMIGGRSGMMFALLMALGMNFFSYWFSDKMVLRMYNAR       60
61       EVDAASAPQFYGMVQELAQRAGLPMPRVYLIDEDAPNAFATGRNPENAAVAATTGILRVL      120
121      SNRELRGVMAHELAHVKHRDILISTIAATMAGAIAALANFAMFFGGRDEEGRPANPIASI      180
181      AMAILAPLAASLIQMAISRAREFEADRGGAEISGDPQALAMALDKIDRYARGIPFQAAEQ      240
241      HPATAQMMILNPLSGGGIANLFSTHPATEERVARLMQMAQTGTYPV                    286

>MER0336054 - oligopeptidase A [M03.004] peptidase unit: 15-625 ( active site residue(s): 412 metal ligand(s): 411,415,441 ) (Cupriavidus necator) (Source: EMBL nucleotide NZ_AMPR01000585) 
1        PLGRAWGVVGHLSSVADTPALRQAHAENLPRMTEFWSSLGQNLALYEKYKALAASPEYAT       60
61       LSPARRQLLDNELRGFRLGGAELPEDQKPRFAEIQEQQAQLGKAFSDHVLDATNAYSLVI      120
121      EDPARLAGLPPDTLEAAREAAAKDGKEGWKFTLHFPSYFPVLQYADDRALRQTLYEANVT      180
181      RASELSPQYGTGQADWDNTANMREQLALRREEARMLGYGSYGEVSLVPKMADSPAEVLRF      240
241      LDELAAKARPYAERDWAELREFAARELGLAELAPWDVAYASEKLRQQRYAFSEHEVKQYF      300
301      PEPKVLEGLFGVVQKLFSVRIAPDEAQTWHKDVRFYRVTSPDGALLAQFYLDLYAREGKR      360
361      GGAWMDDARGRRERGDGTVQTPVAYLTCNFSAPVGDKPALFTHDEVITLFHEFGHGLHHM      420
421      LTQVGELGVSGINGVEWDAVELPSQFMENFCWEYEVLADMTRHVDTGEPLPRALFERMLA      480
481      AKNFQNGMMTLRQIVFSAFDMHLHTDFDPDGDKSVLELSREINDRIHVVPQYPLSRWPNT      540
541      FSHIFAGGYAAGYYSYKWAEVLSADVYAAFEEAAQLTGSVLDSETGARYHREILSVGGSR      600
601      PAMESFTAFRGRPPQIDALLRHGGMAA                                       627

>MER0406967 - family M20D unassigned peptidases [M20.UPD] peptidase unit: 14-373 ( active site residue(s): 75,132 metal ligand(s): 73,101,133,162,358 ) (Cupriavidus necator) (Source: EMBL nucleotide NZ_AMPR01000622) 
1        MSDTLDSRTELEAIRRTIHQYPELGFEEHRTAELVAQRLERWGYAVTRGVGGTGVVGTLR       60
61       NGDSGRSVGIRADMDALPILESTGLPYASVHCGKMHACGHDGHTAILLGAARQLARTRNF      120
121      DGTVNLIFQPAEEIGAGASGAQRMLADGLFERFPCDAIFGLHNHPGVPVGTFMFRAGPMM      180
181      AACDTVTITIRGKGGHAARPHQSIDPILVAGSLVMALQTIVSRNVDPNETAVVTIGSLHA      240
241      GHAPNVIPESAKLELSVRSFSPEVRTTLETRIRQLVSSHVEGYGAAVDIDYRPGYPVVVN      300
301      SEAETEFARQVAEELVGPDKVVGQIPLIAGSEDFAYFLQQRPGCFVRLGNGAGRPLLHNP      360
361      AYDFNDDNLTVGAAYWTRLVERYLAA                                        386