Sequence for MER0043661
>MER0043661 - pestivirus NS3 polyprotein peptidase [S31.001] peptidase unit: 1593-1803 ( active site residue(s): 1661,1689,1755 ) (bovine viral diarrhea virus 1) (Source: EMBL nucleotide AF526381) 1 MELISNELLYKTYKQKPLGVEEPVYDKEGNPLFGERGTVHPLATLKLPHKRGERNVSTNL 60 61 ACLPRRGDCRSGNSKGPVSGIYLKPGPIYYQDYKDPVYHRAPLELFEEGLMCETTKRIGR 120 121 VTGSDGKLYHIYVCIDGCILVKSASKDHQKVLKWIHNRLNCPLWVTSCSDTKGEGAVRKK 180 181 QQKPDRVEKGKMKITPKESEKDSKTRPPDATIVVEGVKYQVKKKGKVKSKNTQDGLYHNK 240 241 NKPPESRKKLEKALLAWAILAMILTFFQVTAGENITQWNLQDNGTEGVQRAMFQRNVSRS 300 301 LHGIWPERICAGVPSHLATDTELKTILGMMDASEKTNYTCCRLQRHEWNKHGWCNWFNIE 360 361 PWLLLMNKTQANLTQGQPPRECAVTCRYDRDSDLNVVTQARDSPALLTGCKKGKDFSFAG 420 421 KLEKGPCNFEVAASDVLFKEHDCTTIFQDTAHYLVDGVTNSLEGARQGTAKFTTWLGKQL 480 481 GILGKKLENKSKTWFGAYAASPYCEVERKIGYIWYTKNCTPACLPKNTKIVGPGRFDTNA 540 541 EDGKILHEMGGHLSEVLLLSLVVLSDFAPETASVAYLALHFGIPQRHTEVLDCDKNQLNL 600 601 TVGVTTEDVIPGSVWNLGRYVCIRPDWWPYETATVLVFEEISQVIKLVLRALRDLMRIWN 660 661 AATTTAFLVCLVKVVRGQVLQGVLWLLLITGAQGYPDCKPGFLYAIARNEKIGLLGAEGL 720 721 TTTWHEYSAKMRLKDTMVKVWCKEGQFTHYKKKCARESRYLAILHTRALPTTVVFKKLFS 780 781 EQGLAETVDMDDNFEFGLCPCNAKPVIRGKFNTTLLNGPAFQMVCPIGWTGTVACTLVNE 840 841 DTLSTTVVRTYKRAKPFPYRQGCITQTVFGEDLYGCDLGGNWTCIKGEQLKYKGGPIQTC 900 901 KWCGYNFQKSEGLPHYPIGKCRLVNETGYRLVDDTTCNRDGVAIVLNGVLKCRIGDTVVQ 960 961 VIAMDTKLGPMPCKPHEIIQSEGPVEKTACTINYTKTLKNKYFEPRDSYFQQYMLKGEYQ 1020 1021 YWFDLDAKDHHRDYFAESILVIVVALLGGRYVLWLLVTYLVLSEQRASGTQCGAGEIVMM 1080 1081 GNLLTHENIEVTTYFLLLYLLLKEEGIKKWVIFLYHLFVMHPLKSVVVVLLMIGGAVKAE 1140 1141 SGTQGGLEQVDLCFTMVVLIVIGLIVARRDPTVVPLVTIVASLRVSGLDLGPGLDAAMTV 1200 1201 LTLTLLMISYVTDYFRYKKWLQCTLSLVAGVFLIKSLKHLGEIETPELTVPSWRPLTLIL 1260 1261 FYLISTSIVTMWKVDIAGLLLQGVPILLLITTLWADFLTLILILPTYELVKLYYLRAVKT 1320 1321 DVERSWLGGLDYKRVNTVYDVDESGEGVYLFPSRQKGNKNFGILLPLVRATLISCVSSKW 1380 1381 QLIYMCYLTVDFMYYMHRKVIEEISGGTNIISRIVAALIELNWSIEDEECKGLKKFYLLS 1440 1441 GRLRNLIIKHKVRNETVASWYAEEEVYGMPKIMTIIRASTLNKNRHCIICTVCEGRKWKG 1500 1501 GNCPKCGRHGKPITCGMSLADFEERHYKRIFIREGDYEGPFRQEYNGFVQYTARGQLFLR 1560 1561 NLPILATKVKMLMVGNLGEEIGDLEHLGWILRGPAVCKKITEHEKCHVNILDKLTAFFGI 1620 1621 MPRGTTPRAPIRFPTALLKVRRGLETGWAYTHQGGISSVDHVTAGKDLLVCDSMGRTRVV 1680 1681 CQSNNKLTDEAEYGVKTDSGCPDGARCYVLNPEAVNISGSKGAVVHLQKTGGEFTCVTAS 1740 1741 GTPAFFDLKNLKGWSGLPIFEASSGRVVGRVKVGKNEESKPTKIMSGIQTVSKNTADLTE 1800 1801 MVKKITSMNRGDFKQITLATGAGKTTELPKAVIEEIGRHKRVLVLIPLRAAAESVYQYMK 1860 1861 LKHPSISFNLRIGDMKEGDMATGITYASYGYFCQMPQPKLRAAMVEYSYIFLDEYHCATP 1920 1921 EQLAIIGKIHRFSENIRVVAMTATPAGTVTTTGQKHPIEEFIAPEVMKGEDLGSQFLDIA 1980 1981 GLKIPVEEMKGNMLVFVPTRNMAVEVAKKLKAKGYNSGYYYSGEDPANLRVVTSQSPYVV 2040 2041 VATNAIESGVTLPDLDTVVDTGLKCEKRVRVSSKIPFIVTGLKRMAVTVGEQAQRRGRVG 2100 2101 RVKPGRYYRSQETATGSKDYHYDLLQAQRYGIEDGINVTKSFREMNYDWSLYEEDSLLIT 2160 2161 QLEILNNLLISEDLPAAVKNIMARTDHPEPIQLAYNSYEVQVPVLFPKIRNGEVTDTYEN 2220 2221 YSFLNARKLGEDVPVYVYATEDEDLAVDLLGLDWPDPGNQQVAETGKALKQVAGLSSAEN 2280 2281 ALLIALFGYVGYQALSKRHVPMVTDIYTIEDQRLEDTTHLQYAPNAIRTEGKETELKELA 2340 2341 LGDVEKIMGAVSEYASGGMDFIKSQAEKIKTSPSFRENVEAAKGFVQKFIDSLIENKENI 2400 2401 IRYGLWGAHTALYKSIAARLGHETAFATLVLKWLAFGGESVSDHIRQVAVDLVVYYVMNK 2460 2461 PSFPGDSETQQEGRRFVASLFISALATYTYKTWNYNNLAKVVEPALAYLPYATSALKMFT 2520 2521 PTRLESVVILSTTIYKTYLSIRKGKSDGLLGTGISAAMEILSQNPVSVGISVMLGVGAIA 2580 2581 AHNAIESSEQKRTLLMKVFVKNFLDQAATDELVKENPEEIIMALFEAVQTIGNPLRLIYH 2640 2641 LYGVYYKGWEAKELSERTAGRNLFTLIMFEAFELLGMDSEGKIRNLSGNYILELVYSFHK 2700 2701 HINRSIRRTVLGWAPAPFSCDWTPSDERIRLPTDNYLRVETKCPCGYEMKAFRNVSGSLT 2760 2761 KVEEKGPFLCRNRPGRGAVNYRVTKYFDDNLREIKPVARLEGQVEHYYKGVTARIDYSKG 2820 2821 KMLLATDKWEVEHGVVTRLAKRYTGVGFKGAYLGDEPNHRDLVERDCATITKNTVQFLKM 2880 2881 KRGCAFTYDLTLSNLTRLIELVHRNNLEEKDIPTATVTTWLAYTFVNEDIGTIRPVLGEK 2940 2941 VVPDPVLDVNLQPEVEVDTSEVAITLIGKGTLMTTGTTPVIERVEPSTTSNPNSLKIGLE 3000 3001 TGNYPGPGQQTHTLVEEIHERDSRPFVMVLGSKNSMSNRAKTARSINLYTGNDPREIRDL 3060 3061 MAQGRMLVVALRDFDPELSELVDYKGTFLDREALEALSLGQPKAKRVSKTMIRNLLEQRE 3120 3121 QVEVPNWFCSDDPVFLEVVVKKDKYYLAGDVEQVKNQAKELGANDQTRIVKEVGARTYTM 3180 3181 KLSSWFMQESNKHVTLTPLFEELLLRCPPRIKSSQGHMASAYQLAQGNWEPLDCGVYLGT 3240 3241 VPARRVKIHPYEAYLRLKDLLEEEERKPRTKDTVMREHNKWILRKVKHQGNLNTKKILNP 3300 3301 GKLSEQLDREGQKRNVYNNQIGAIMIGAGIGLEKLPIVRAQTDTKSFHEAIRDKIDKDEN 3360 3361 QQNQELHGKLLEIFHSIANPTLKHTYGEVTWEQLESGINRKGAAGFLEKKNIGEVLDSEK 3420 3421 HLVEQLIRDLKMGRKIKYYETAIPKNEKRDVSDDWQAGDMVSEKRPRVIQYPEAKTRLAI 3480 3481 TKVMYNWVKQQPVVIPGYEGKTPLFNIFNKVKKEWDMFQEPVAVSFDTKAWDTQVTSKDL 3540 3541 RLVGEIQKFYYKKEWHKFIDTITDHMVEVPVITADGEVYIRCGQRGSGQPDTSAGNSMLN 3600 3601 VLTMIYAFCESTGVPYKSFNRVARIHVCGDDGFLITEKGLGLRFASKGKQILHEAGKPQK 3660 3661 ITEGERMKVAYRFEDIEFCSHTPVPVRWSDNTSSYMAGRDTAVILSKMVTRLDSSGERGT 3720 3721 TAYEKAVAFSFLLMYSWNPLVRRICLLALSRQPETAPSSNTTYYYSGDPIGAYKDVIGRN 3780 3781 LSELKRTGFEKLANLNLSLSTLGIWTKHTSKRVIQDCVTIGKEEGNWLVNADRLVSSKTG 3840 3841 QPYVPGRGYALQGKHYEQLILKTSKSPVVEVGVERYKIGPIVNLLLRRLKVLLMAAVGAS 3900 3901 S 3901
