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sample_name:"NDUFB9"
Cryo-EM structure of Euglena gracilis super-complex I+III2+IV, composite
Release date: Feb. 28, 2024
Resolution: 2.81 Å
EM Method: Single-particle
Fitted PDBs: 8iuf
Q-score: 0.615
Resolution: 2.81 Å
EM Method: Single-particle
Fitted PDBs: 8iuf
Q-score: 0.615
He Z, Wu M, Tian H, Wang L, Hu Y, Han F, Zhou J, Wang Y, Zhou L
Nat Commun (2024) 15 pp. 1628-1628 [ Pubmed: 38388527 DOI: doi:10.1038/s41467-024-46018-z ]
Sample:
- Coxeg3 (16 kDa, Protein from Euglena gracilis)
- Uqcr9 (6 kDa, Protein from Euglena gracilis)
- Cardiolipin (1 kDa, Ligand)
- Ndufb10 (17 kDa, Protein from Euglena gracilis)
- Ndueg9 (18 kDa, Protein from Euglena gracilis)
- Ndufs1a (43 kDa, Protein from Euglena gracilis)
- Ndufs4 (23 kDa, Protein from Euglena gracilis)
- Ndufa5 (20 kDa, Protein from Euglena gracilis)
- Uqcrq (9 kDa, Protein from Euglena gracilis)
- Nduca1 (48 kDa, Protein from Euglena gracilis)
- Ndueg3 (63 kDa, Protein from Euglena gracilis)
- Uqcrh (8 kDa, Protein from Euglena gracilis)
- Ndufa13 (22 kDa, Protein from Euglena gracilis)
- Coxeg5 (19 kDa, Protein from Euglena gracilis)
- Cox7a (20 kDa, Protein from Euglena gracilis)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
- Mpp-beta (53 kDa, Protein from Euglena gracilis)
- Ndufs7 (22 kDa, Protein from Euglena gracilis)
- Ndufa8 (25 kDa, Protein from Euglena gracilis)
- Nd1 (79 kDa, Protein from Euglena gracilis)
- Nadph dihydro-nicotinamide-adenine-dinucleotide phosphate (745 Da, Ligand)
- Uqcrfs1 (27 kDa, Protein from Euglena gracilis)
- Ndueg10 (14 kDa, Protein from Euglena gracilis)
- Ndufs8 (24 kDa, Protein from Euglena gracilis)
- Ndufa7 (16 kDa, Protein from Euglena gracilis)
- Ndufb6 (10 kDa, Protein from Euglena gracilis)
- Ndufb11 (13 kDa, Protein from Euglena gracilis)
- Ndufab1-beta (14 kDa, Protein from Euglena gracilis)
- Ndufs3 (32 kDa, Protein from Euglena gracilis)
- Nduca3 (28 kDa, Protein from Euglena gracilis)
- Heme-a (852 Da, Ligand)
- Nadh-ubiquinone oxidoreductase chain 4 (56 kDa, Protein from Euglena gracilis)
- Euglena gracilis respirasome supercomplex i+iii2+iv (Complex from Euglena gracilis)
- Ndufa3 (14 kDa, Protein from Euglena gracilis)
- Cytochrome b (42 kDa, Protein from Euglena gracilis)
- 1,2-dilauroyl-sn-glycero-3-phosphate (535 Da, Ligand)
- Ubiquinol-cytochrome-c reductase complex subunit ix, mitochondrial (11 kDa, Protein from Euglena gracilis)
- Ndufs6 (17 kDa, Protein from Euglena gracilis)
- O-[(s)-hydroxy{[(2s)-2-hydroxy-3-(octadec-9-enoyloxy)propyl]oxy}phosphoryl]-l-serine (523 Da, Ligand)
- Ndueg5 (29 kDa, Protein from Euglena gracilis)
- Uqcrb (27 kDa, Protein from Euglena gracilis)
- Ndufa11 (32 kDa, Protein from Euglena gracilis)
- Cox7c (19 kDa, Protein from Euglena gracilis)
- Ndufa2 (21 kDa, Protein from Euglena gracilis)
- Cox4 (20 kDa, Protein from Euglena gracilis)
- Ndufa6 (48 kDa, Protein from Euglena gracilis)
- Ndueg6 (43 kDa, Protein from Euglena gracilis)
- Nd5 (68 kDa, Protein from Euglena gracilis)
- Ndufs5 (14 kDa, Protein from Euglena gracilis)
- Ndufa1 (15 kDa, Protein from Euglena gracilis)
- S-[2-({n-[(2s)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] tetradecanethioate (568 Da, Ligand)
- Heme c (618 Da, Ligand)
- Ndufb5 (15 kDa, Protein from Euglena gracilis)
- Ndueg11 (11 kDa, Protein from Euglena gracilis)
- Ndufv1 (57 kDa, Protein from Euglena gracilis)
- Nd4l (19 kDa, Protein from Euglena gracilis)
- Ndufc2 (22 kDa, Protein from Euglena gracilis)
- Copper (ii) ion (63 Da, Ligand)
- Putative nadh dehydrogenase subunit 6 (19 kDa, Protein from Euglena gracilis)
- Ndufa9 (54 kDa, Protein from Euglena gracilis)
- Coxeg4 (19 kDa, Protein from Euglena gracilis)
- Cytochrome c oxidase subunit 2 (22 kDa, Protein from Euglena gracilis)
- Nd3 (34 kDa, Protein from Euglena gracilis)
- Uqcr10 (17 kDa, Protein from Euglena gracilis)
- Ndueg2 (51 kDa, Protein from Euglena gracilis)
- Nd2b (15 kDa, Protein from Euglena gracilis)
- Coxeg10 (10 kDa, Protein from Euglena gracilis)
- Ndueg1 (53 kDa, Protein from Euglena gracilis)
- Coxeg6 (8 kDa, Protein from Euglena gracilis)
- Ndueg7 (26 kDa, Protein from Euglena gracilis)
- Cox5c (23 kDa, Protein from Euglena gracilis)
- Cox6a (13 kDa, Protein from Euglena gracilis)
- 1,2-distearoyl-sn-glycerophosphoethanolamine (748 Da, Ligand)
- Ndufb2 (17 kDa, Protein from Euglena gracilis)
- Cox5b-2 (19 kDa, Protein from Euglena gracilis)
- Ndueg4 (41 kDa, Protein from Euglena gracilis)
- Ndufb8 (20 kDa, Protein from Euglena gracilis)
- Ndueg13 (17 kDa, Protein from Euglena gracilis)
- Nduca2 (28 kDa, Protein from Euglena gracilis)
- Ndufb9 (18 kDa, Protein from Euglena gracilis)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- Coxeg1 (27 kDa, Protein from Euglena gracilis)
- Nd2a (35 kDa, Protein from Euglena gracilis)
- Zinc ion (65 Da, Ligand)
- Ndufb3 (6 kDa, Protein from Euglena gracilis)
- Cytochrome c oxidase subunit 1 (55 kDa, Protein from Euglena gracilis)
- Ndufab1-alpha (14 kDa, Protein from Euglena gracilis)
- Coxeg9 (31 kDa, Protein from Euglena gracilis)
- Ndueg11 (11 kDa, Protein from Euglena gracilis)
- Ndueg8 (23 kDa, Protein from Euglena gracilis)
- Ubiquinone-10 (863 Da, Ligand)
- Flavin mononucleotide (456 Da, Ligand)
- Iron/sulfur cluster (351 Da, Ligand)
- Potassium ion (39 Da, Ligand)
- Ndufs1b (59 kDa, Protein from Euglena gracilis)
- 1,2-diacyl-sn-glycero-3-phosphocholine (790 Da, Ligand)
- Ndufs2 (45 kDa, Protein from Euglena gracilis)
- Ndufb7 (12 kDa, Protein from Euglena gracilis)
- Magnesium ion (24 Da, Ligand)
- Cytochrome c1, heme protein (27 kDa, Protein from Euglena gracilis)
- Coxeg7 (35 kDa, Protein from Euglena gracilis)
- Ndufa12 (33 kDa, Protein from Euglena gracilis)
- Ndufx (37 kDa, Protein from Euglena gracilis)
- Ubiquinol-cytochrome-c reductase complex core protein 2, mitochondrial (51 kDa, Protein from Euglena gracilis)
- Cox6b-1 (32 kDa, Protein from Euglena gracilis)
- Ndufb4 (19 kDa, Protein from Euglena gracilis)
- Coxeg8 (24 kDa, Protein from Euglena gracilis)
- Euglena gracilis respirasome supercomplex i+iii2+iv (2 MDa, Complex from Euglena gracilis)
- Ndufv2 (25 kDa, Protein from Euglena gracilis)
- Poly(unk) (1 kDa, Protein from Euglena gracilis)
Cryo-EM composite map of Euglena gracilis respiratory complex I, deactive state
Release date: Feb. 28, 2024
Resolution: 3.11 Å
EM Method: Single-particle
Fitted PDBs: 8j9h
Q-score: 0.528
Resolution: 3.11 Å
EM Method: Single-particle
Fitted PDBs: 8j9h
Q-score: 0.528
He Z, Wu M, Tian H, Wang L, Hu Y, Han F, Zhou J, Wang Y, Zhou L
Nat Commun (2024) 15 pp. 1628-1628 [ Pubmed: 38388527 DOI: doi:10.1038/s41467-024-46018-z ]
Sample:
- Ndueg10 (14 kDa, Protein from Euglena gracilis)
- Ndueg13 (17 kDa, Protein from Euglena gracilis)
- Nduca2 (28 kDa, Protein from Euglena gracilis)
- Ndufb5 (15 kDa, Protein from Euglena gracilis)
- Ndueg11 (11 kDa, Protein from Euglena gracilis)
- Ndufb9 (18 kDa, Protein from Euglena gracilis)
- Nd2a (35 kDa, Protein from Euglena gracilis)
- Ndufv1 (57 kDa, Protein from Euglena gracilis)
- Ndufs8 (24 kDa, Protein from Euglena gracilis)
- Nd4l (19 kDa, Protein from Euglena gracilis)
- Ndueg2 (50 kDa, Protein from Euglena gracilis)
- Ndufa7 (16 kDa, Protein from Euglena gracilis)
- Ndufb6 (10 kDa, Protein from Euglena gracilis)
- Ndufb11 (13 kDa, Protein from Euglena gracilis)
- Ndufab1-beta (14 kDa, Protein from Euglena gracilis)
- Ndus1a (43 kDa, Protein from Euglena gracilis)
- Ndufs3 (32 kDa, Protein from Euglena gracilis)
- Zinc ion (65 Da, Ligand)
- Nduca3 (28 kDa, Protein from Euglena gracilis)
- Unk-unk-unk-unk-unk-unk-unk-unk-unk-unk-unk-unk (1 kDa, Protein from Euglena gracilis)
- Ndufc2 (22 kDa, Protein from Euglena gracilis)
- Cardiolipin (1 kDa, Ligand)
- Ndufb3 (6 kDa, Protein from Euglena gracilis)
- Nadh-ubiquinone oxidoreductase chain 4 (56 kDa, Protein from Euglena gracilis)
- Ndufa3 (14 kDa, Protein from Euglena gracilis)
- Ndufa9 (54 kDa, Protein from Euglena gracilis)
- Ndufab1-alpha (14 kDa, Protein from Euglena gracilis)
- Ndufb10 (17 kDa, Protein from Euglena gracilis)
- Ndufs4 (23 kDa, Protein from Euglena gracilis)
- Ndueg8 (23 kDa, Protein from Euglena gracilis)
- Ubiquinone-10 (863 Da, Ligand)
- Flavin mononucleotide (456 Da, Ligand)
- Iron/sulfur cluster (351 Da, Ligand)
- Ndufs6 (17 kDa, Protein from Euglena gracilis)
- Potassium ion (39 Da, Ligand)
- Ndufa5 (20 kDa, Protein from Euglena gracilis)
- Nduca1 (48 kDa, Protein from Euglena gracilis)
- Nd3 (34 kDa, Protein from Euglena gracilis)
- Ndueg5 (29 kDa, Protein from Euglena gracilis)
- Ndufa11 (32 kDa, Protein from Euglena gracilis)
- Ndueg1 (53 kDa, Protein from Euglena gracilis)
- Ndueg7 (26 kDa, Protein from Euglena gracilis)
- Ndufa13 (22 kDa, Protein from Euglena gracilis)
- Ndufa2 (21 kDa, Protein from Euglena gracilis)
- Ndufv2 (25 kDa, Protein from Euglena gracilis)
- 1,2-distearoyl-sn-glycerophosphoethanolamine (748 Da, Ligand)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
- Ndufa6 (48 kDa, Protein from Euglena gracilis)
- Ndueg6 (43 kDa, Protein from Euglena gracilis)
- Nadh dehydrogenase subunit 5 (15 kDa, Protein from Euglena gracilis)
- Nd5 (68 kDa, Protein from Euglena gracilis)
- Ndufs2 (45 kDa, Protein from Euglena gracilis)
- Ndufs5 (14 kDa, Protein from Euglena gracilis)
- Ndufb7 (12 kDa, Protein from Euglena gracilis)
- 1,2-diacyl-sn-glycero-3-phosphocholine (790 Da, Ligand)
- Ndufa1 (15 kDa, Protein from Euglena gracilis)
- S-[2-({n-[(2s)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] tetradecanethioate (568 Da, Ligand)
- Ndufb2 (17 kDa, Protein from Euglena gracilis)
- Ndueg12 (11 kDa, Protein from Euglena gracilis)
- Ndufs7 (22 kDa, Protein from Euglena gracilis)
- Ndufa12 (33 kDa, Protein from Euglena gracilis)
- Ndueg3 (46 kDa, Protein from Euglena gracilis)
- Ndufa8 (25 kDa, Protein from Euglena gracilis)
- Ndus1b (59 kDa, Protein from Euglena gracilis)
- Euglena gracilis respiratory complex i, deactive state (1 MDa, Complex from Euglena gracilis)
- Ndufx (37 kDa, Protein from Euglena gracilis)
- Nd1 (79 kDa, Protein from Euglena gracilis)
- Ndufb4 (19 kDa, Protein from Euglena gracilis)
- Nadph dihydro-nicotinamide-adenine-dinucleotide phosphate (745 Da, Ligand)
- Ndueg4 (41 kDa, Protein from Euglena gracilis)
- Ndufb8 (20 kDa, Protein from Euglena gracilis)
Cryo-EM composite map of Euglena gracilis complex I, turnover state
Release date: Feb. 28, 2024
Resolution: 2.87 Å
EM Method: Single-particle
Fitted PDBs: 8j9i
Q-score: 0.584
Resolution: 2.87 Å
EM Method: Single-particle
Fitted PDBs: 8j9i
Q-score: 0.584
He Z, Wu M, Tian H, Wang L, Hu Y, Han F, Zhou J, Wang Y, Zhou L
Nat Commun (2024) 15 pp. 1628-1628 [ Pubmed: 38388527 DOI: doi:10.1038/s41467-024-46018-z ]
Sample:
- Ndueg10 (14 kDa, Protein from Euglena gracilis)
- Ndueg13 (17 kDa, Protein from Euglena gracilis)
- Nduca2 (28 kDa, Protein from Euglena gracilis)
- Ndufb5 (15 kDa, Protein from Euglena gracilis)
- Ndueg11 (11 kDa, Protein from Euglena gracilis)
- Euglena gracilis respiratory complex i, turnover state (1 MDa, Complex from Euglena gracilis)
- Ndufb9 (18 kDa, Protein from Euglena gracilis)
- Nd2a (35 kDa, Protein from Euglena gracilis)
- Ndufv1 (57 kDa, Protein from Euglena gracilis)
- Ndufs8 (24 kDa, Protein from Euglena gracilis)
- Nd4l (19 kDa, Protein from Euglena gracilis)
- Ndueg2 (50 kDa, Protein from Euglena gracilis)
- Ndufa7 (16 kDa, Protein from Euglena gracilis)
- Ndufb6 (10 kDa, Protein from Euglena gracilis)
- Ndufb11 (13 kDa, Protein from Euglena gracilis)
- Ndufab1-beta (14 kDa, Protein from Euglena gracilis)
- Zinc ion (65 Da, Ligand)
- Ndufs3 (32 kDa, Protein from Euglena gracilis)
- Nduca3 (28 kDa, Protein from Euglena gracilis)
- Unk-unk-unk-unk-unk-unk-unk-unk-unk-unk-unk-unk (1 kDa, Protein from Euglena gracilis)
- Ndufc2 (22 kDa, Protein from Euglena gracilis)
- Cardiolipin (1 kDa, Ligand)
- Ndufb3 (6 kDa, Protein from Euglena gracilis)
- Nadh-ubiquinone oxidoreductase chain 4 (56 kDa, Protein from Euglena gracilis)
- Ndufa3 (14 kDa, Protein from Euglena gracilis)
- Ndufa9 (54 kDa, Protein from Euglena gracilis)
- Ndufab1-alpha (14 kDa, Protein from Euglena gracilis)
- Ndufb10 (17 kDa, Protein from Euglena gracilis)
- Ndufs4 (23 kDa, Protein from Euglena gracilis)
- Ndueg8 (23 kDa, Protein from Euglena gracilis)
- Ubiquinone-10 (863 Da, Ligand)
- Flavin mononucleotide (456 Da, Ligand)
- Iron/sulfur cluster (351 Da, Ligand)
- Ndufs6 (17 kDa, Protein from Euglena gracilis)
- Potassium ion (39 Da, Ligand)
- Ndufa5 (20 kDa, Protein from Euglena gracilis)
- 1,4-dihydronicotinamide adenine dinucleotide (665 Da, Ligand)
- Nduca1 (48 kDa, Protein from Euglena gracilis)
- Nd3 (34 kDa, Protein from Euglena gracilis)
- Ndueg5 (29 kDa, Protein from Euglena gracilis)
- Nd2b (15 kDa, Protein from Euglena gracilis)
- Ndufa11 (32 kDa, Protein from Euglena gracilis)
- Ndueg1 (53 kDa, Protein from Euglena gracilis)
- Ndueg7 (26 kDa, Protein from Euglena gracilis)
- Ndufa13 (22 kDa, Protein from Euglena gracilis)
- Ndufa2 (21 kDa, Protein from Euglena gracilis)
- Ndufv2 (25 kDa, Protein from Euglena gracilis)
- 1,2-distearoyl-sn-glycerophosphoethanolamine (748 Da, Ligand)
- Ndufs1b (59 kDa, Protein from Euglena gracilis)
- Ndufa6 (48 kDa, Protein from Euglena gracilis)
- Ndueg6 (43 kDa, Protein from Euglena gracilis)
- Nd5 (68 kDa, Protein from Euglena gracilis)
- Ndufs2 (45 kDa, Protein from Euglena gracilis)
- Ndufs5 (14 kDa, Protein from Euglena gracilis)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
- Ndufb7 (12 kDa, Protein from Euglena gracilis)
- 1,2-diacyl-sn-glycero-3-phosphocholine (790 Da, Ligand)
- Ndufa1 (15 kDa, Protein from Euglena gracilis)
- S-[2-({n-[(2s)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] tetradecanethioate (568 Da, Ligand)
- Ndufb2 (17 kDa, Protein from Euglena gracilis)
- Ndueg12 (11 kDa, Protein from Euglena gracilis)
- Ndufs1a (43 kDa, Protein from Euglena gracilis)
- Ndufs7 (22 kDa, Protein from Euglena gracilis)
- Ndufa12 (33 kDa, Protein from Euglena gracilis)
- Ndueg3 (46 kDa, Protein from Euglena gracilis)
- Ndufa8 (25 kDa, Protein from Euglena gracilis)
- Ndufx (37 kDa, Protein from Euglena gracilis)
- Nd1 (79 kDa, Protein from Euglena gracilis)
- Ndufb4 (19 kDa, Protein from Euglena gracilis)
- Nadph dihydro-nicotinamide-adenine-dinucleotide phosphate (745 Da, Ligand)
- Ndueg4 (41 kDa, Protein from Euglena gracilis)
- Ndufb8 (20 kDa, Protein from Euglena gracilis)
Cryo-EM composite map of Euglena gracilis complex I, NADH state
Release date: Feb. 28, 2024
Resolution: 3.03 Å
EM Method: Single-particle
Fitted PDBs: 8j9j
Q-score: 0.531
Resolution: 3.03 Å
EM Method: Single-particle
Fitted PDBs: 8j9j
Q-score: 0.531
He Z, Wu M, Tian H, Wang L, Hu Y, Han F, Zhou J, Wang Y, Zhou L
Nat Commun (2024) 15 pp. 1628-1628 [ Pubmed: 38388527 DOI: doi:10.1038/s41467-024-46018-z ]
Sample:
- Ndueg10 (14 kDa, Protein from Euglena gracilis)
- Ndueg13 (17 kDa, Protein from Euglena gracilis)
- Nduca2 (28 kDa, Protein from Euglena gracilis)
- Ndufb5 (15 kDa, Protein from Euglena gracilis)
- Ndueg11 (11 kDa, Protein from Euglena gracilis)
- Ndufb9 (18 kDa, Protein from Euglena gracilis)
- Nd2a (35 kDa, Protein from Euglena gracilis)
- Ndufv1 (57 kDa, Protein from Euglena gracilis)
- Ndufs8 (24 kDa, Protein from Euglena gracilis)
- Nd4l (19 kDa, Protein from Euglena gracilis)
- Ndueg2 (50 kDa, Protein from Euglena gracilis)
- Ndufa7 (16 kDa, Protein from Euglena gracilis)
- Ndufb6 (10 kDa, Protein from Euglena gracilis)
- Ndufb11 (13 kDa, Protein from Euglena gracilis)
- Ndufab1-beta (14 kDa, Protein from Euglena gracilis)
- Zinc ion (65 Da, Ligand)
- Ndufs3 (32 kDa, Protein from Euglena gracilis)
- Nduca3 (28 kDa, Protein from Euglena gracilis)
- Unk-unk-unk-unk-unk-unk-unk-unk-unk-unk-unk-unk (1 kDa, Protein from Euglena gracilis)
- Ndufc2 (22 kDa, Protein from Euglena gracilis)
- Cardiolipin (1 kDa, Ligand)
- Ndufb3 (6 kDa, Protein from Euglena gracilis)
- Euglena gracilis respiratory complex i, nadh state (1 MDa, Complex from Euglena gracilis)
- Nadh-ubiquinone oxidoreductase chain 4 (56 kDa, Protein from Euglena gracilis)
- Ndufa3 (14 kDa, Protein from Euglena gracilis)
- Ndufa9 (54 kDa, Protein from Euglena gracilis)
- Ndufab1-alpha (14 kDa, Protein from Euglena gracilis)
- Ndufb10 (17 kDa, Protein from Euglena gracilis)
- Ndufs4 (23 kDa, Protein from Euglena gracilis)
- Ndueg8 (23 kDa, Protein from Euglena gracilis)
- Ubiquinone-10 (863 Da, Ligand)
- Flavin mononucleotide (456 Da, Ligand)
- Iron/sulfur cluster (351 Da, Ligand)
- Ndufs6 (17 kDa, Protein from Euglena gracilis)
- Potassium ion (39 Da, Ligand)
- Ndufa5 (20 kDa, Protein from Euglena gracilis)
- 1,4-dihydronicotinamide adenine dinucleotide (665 Da, Ligand)
- Nduca1 (48 kDa, Protein from Euglena gracilis)
- Nd3 (34 kDa, Protein from Euglena gracilis)
- Ndueg5 (29 kDa, Protein from Euglena gracilis)
- Nd2b (15 kDa, Protein from Euglena gracilis)
- Ndufa11 (32 kDa, Protein from Euglena gracilis)
- Ndueg1 (53 kDa, Protein from Euglena gracilis)
- Ndueg7 (26 kDa, Protein from Euglena gracilis)
- Ndufa13 (22 kDa, Protein from Euglena gracilis)
- Ndufa2 (21 kDa, Protein from Euglena gracilis)
- Ndufv2 (25 kDa, Protein from Euglena gracilis)
- 1,2-distearoyl-sn-glycerophosphoethanolamine (748 Da, Ligand)
- Ndufs1b (59 kDa, Protein from Euglena gracilis)
- Ndufa6 (48 kDa, Protein from Euglena gracilis)
- Ndueg6 (43 kDa, Protein from Euglena gracilis)
- Nd5 (68 kDa, Protein from Euglena gracilis)
- Ndufs2 (45 kDa, Protein from Euglena gracilis)
- Ndufs5 (14 kDa, Protein from Euglena gracilis)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
- Ndufb7 (12 kDa, Protein from Euglena gracilis)
- 1,2-diacyl-sn-glycero-3-phosphocholine (790 Da, Ligand)
- Ndufa1 (15 kDa, Protein from Euglena gracilis)
- S-[2-({n-[(2s)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] tetradecanethioate (568 Da, Ligand)
- Ndufb2 (17 kDa, Protein from Euglena gracilis)
- Ndueg12 (11 kDa, Protein from Euglena gracilis)
- Ndufs1a (43 kDa, Protein from Euglena gracilis)
- Ndufs7 (22 kDa, Protein from Euglena gracilis)
- Ndufa12 (33 kDa, Protein from Euglena gracilis)
- Ndueg3 (46 kDa, Protein from Euglena gracilis)
- Ndufa8 (25 kDa, Protein from Euglena gracilis)
- Ndufx (37 kDa, Protein from Euglena gracilis)
- Nd1 (79 kDa, Protein from Euglena gracilis)
- Ndufb4 (19 kDa, Protein from Euglena gracilis)
- Nadph dihydro-nicotinamide-adenine-dinucleotide phosphate (745 Da, Ligand)
- Ndueg4 (41 kDa, Protein from Euglena gracilis)
- Ndufb8 (20 kDa, Protein from Euglena gracilis)
Structure of mammalian respiratory Complex I, class1
Release date: Sept. 7, 2016
Resolution: 4.27 Å
EM Method: Single-particle
Fitted PDBs: 5ldw
Q-score: 0.33
Resolution: 4.27 Å
EM Method: Single-particle
Fitted PDBs: 5ldw
Q-score: 0.33
Zhu J, Vinothkumar KR, Hirst J
Nature (2016) 536 pp. 354-358 [ Pubmed: 27509854 DOI: doi:10.1038/nature19095 ]
Sample:
- Nadh dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial (20 kDa, Protein from Bovine)
- Iron/sulfur cluster (351 Da, Ligand)
- Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 (15 kDa, Protein from Bovine)
- Nadh dehydrogenase [ubiquinone] flavoprotein 3, ndufv3 (2 kDa, Protein from Bovine)
- Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial (14 kDa, Protein from Bovine)
- Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3, ndufb3 (6 kDa, Protein from Bovine)
- Nadh dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial (49 kDa, Protein from Bovine)
- Acyl carrier protein, mitochondrial (10 kDa, Protein from Bovine)
- Nadh-ubiquinone oxidoreductase chain 1 (35 kDa, Protein from Bovine)
- Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4, ndufb4,nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4, ndufb4,nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 (13 kDa, Protein from Bovine)
- Zinc ion (65 Da, Ligand)
- Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 (13 kDa, Protein from Bovine)
- Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13, ndufa13,nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13,nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13, ndufa13,nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13,nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13, ndufa13,nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13,nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13, ndufa13 (14 kDa, Protein from Bovine)
- Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, ndufa9 (25 kDa, Protein from Bovine)
- Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10, ndufb10,nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10,nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10, ndufb10,nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10,nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10, ndufb10,nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10,nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10, ndufb10 (16 kDa, Protein from Bovine)
- Nadh-ubiquinone oxidoreductase chain 6 (19 kDa, Protein from Bovine)
- Nadh-ubiquinone oxidoreductase chain 4 (52 kDa, Protein from Bovine)
- Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 (17 kDa, Protein from Bovine)
- Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, ndufa10,nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, ndufa10,nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial (34 kDa, Protein from Bovine)
- Nadh dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial (26 kDa, Protein from Bovine)
- Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 (8 kDa, Protein from Bovine)
- Nadh dehydrogenase [ubiquinone] iron-sulfur protein 4, ndufs4 (9 kDa, Protein from Bovine)
- Nadh-ubiquinone oxidoreductase chain 4l (10 kDa, Protein from Bovine)
- Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 (11 kDa, Protein from Bovine)
- Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9,nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9,nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9, ndufb9 (19 kDa, Protein from Bovine)
- Nadh dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial (23 kDa, Protein from Bovine)
- Nadh-ubiquinone oxidoreductase chain 5 (68 kDa, Protein from Bovine)
- Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, ndufb2 (4 kDa, Protein from Bovine)
- Flavin mononucleotide (456 Da, Ligand)
- Nadh-ubiquinone oxidoreductase chain 3 (13 kDa, Protein from Bovine)
- Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3,nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3,nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3, ndufa3 (7 kDa, Protein from Bovine)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
- Nadh dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial (20 kDa, Protein from Bovine)
- Nadp nicotinamide-adenine-dinucleotide phosphate (743 Da, Ligand)
- Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7, ndufa7 (7 kDa, Protein from Bovine)
- Nadh dehydrogenase [ubiquinone] iron-sulfur protein 5 (12 kDa, Protein from Bovine)
- Nadh dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (48 kDa, Protein from Bovine)
- Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1 (6 kDa, Protein from Bovine)
- Nadh dehydrogenase [ubiquinone] iron-sulfur protein 6, ndufs6,nadh dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial,nadh dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial (8 kDa, Protein from Bovine)
- Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8,nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8,nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8, ndufa8 (18 kDa, Protein from Bovine)
- Nadh dehydrogenase [ubiquinone] 1 subunit c2, ndufc2,nadh dehydrogenase [ubiquinone] 1 subunit c2,nadh dehydrogenase [ubiquinone] 1 subunit c2, ndufc2,nadh dehydrogenase [ubiquinone] 1 subunit c2,nadh dehydrogenase [ubiquinone] 1 subunit c2, ndufc2,nadh dehydrogenase [ubiquinone] 1 subunit c2,nadh dehydrogenase [ubiquinone] 1 subunit c2, ndufc2 (11 kDa, Protein from Bovine)
- Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, ndufb8 (10 kDa, Protein from Bovine)
- Nadh-ubiquinone oxidoreductase chain 2 (39 kDa, Protein from Bovine)
- Nadh dehydrogenase [ubiquinone] 1 subunit c1, mitochondrial (5 kDa, Protein from Bovine)
- Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11 (14 kDa, Protein from Bovine)
- Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (16 kDa, Protein from Bovine)
- Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial,nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial,nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, ndufb5 (12 kDa, Protein from Bovine)
- Bovine respiratory complex i (1 MDa, Complex from Bos taurus)
- Nadh-ubiquinone oxidoreductase 75 kda subunit, mitochondrial,nadh-ubiquinone oxidoreductase 75 kda subunit, mitochondrial (71 kDa, Protein from Bovine)
- Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6,nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6,nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6, ndufb6 (10 kDa, Protein from Bovine)