Electron Microscopy Data Bank

EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

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sample_name:"Cytochrome c oxidase subunit 7B, mitochondrial" AND author_name:"Rubinstein J"

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EMD-27196

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Mammalian CIV with GDN bound

Release date: July 6, 2022
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8d4t
Q-score: 0.545

Di Trani JM, Moe A, Riepl D, Saura P, Kaila VRI, Brzezinski P, Rubinstein JL

PNAS (2022) 119 pp. e2205228119-e2205228119 [ DOI: doi:10.1073/pnas.2205228119 Pubmed: 35858451 ]

Sample:

Cytochrome c oxidase subunit 5b, mitochondrial (10 kDa, Protein from cattle)
Cytochrome c oxidase subunit 7a1, mitochondrial (6 kDa, Protein from cattle)
Cytochrome c oxidase subunit 6a2, mitochondrial (8 kDa, Protein from cattle)
Cytochrome c oxidase subunit 1 (56 kDa, Protein from cattle)
Sodium ion (22 Da, Ligand)
(1s)-2-{[(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(stearoyloxy)methyl]ethyl (5e,8e,11e,14e)-icosa-5,8,11,14-tetraenoate (768 Da, Ligand)
Cytochrome c oxidase subunit 4 isoform 1, mitochondrial (16 kDa, Protein from cattle)
Zinc ion (65 Da, Ligand)
Cytochrome c oxidase subunit 8a, mitochondrial (4 kDa, Protein from cattle)
Cytochrome c oxidase subunit 2 (26 kDa, Protein from cattle)
Cytochrome c oxidase subunit 3 (29 kDa, Protein from cattle)
Cytochrome c oxidase subunit 6b1 (9 kDa, Protein from cattle)
Magnesium ion (24 Da, Ligand)
Heme-a (852 Da, Ligand)
Cytochrome c oxidase subunit 7c, mitochondrial (5 kDa, Protein from cattle)
(3beta,14beta,17beta,25r)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en (544 Da, Ligand)
Cytochrome c oxidase subunit 7b, mitochondrial (5 kDa, Protein from cattle)
Cytochrome c oxidase (Complex from Bos taurus)
Copper (ii) ion (63 Da, Ligand)
(1r)-2-{[{[(2s)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(palmitoyloxy)methyl]ethyl (11e)-octadec-11-enoate (749 Da, Ligand)
Cytochrome c oxidase subunit 5a, mitochondrial (11 kDa, Protein from cattle)
Cytochrome c oxidase subunit 6c (8 kDa, Protein from cattle)

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