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EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Research:

perform basic research in molecular biology

Services:

offer vital services to scientists in the member states

Training

scientists, students and visitors at all levels

Transfer

and development of technology

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

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sample_name:"50S ribosomal protein L33 1" AND author_name:"Ignatova Z" AND resolution:[3 TO 4}

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EMD-13017

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RqcH DR variant bound to 50S-peptidyl-tRNA-RqcP RQC complex (rigid body refinement)

Release date: July 21, 2021
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7ope
Q-score: 0.309

Takada H, Crowe-McAuliffe C, Polte C, Sidorova ZY, Murina V, Atkinson GC, Konevega AL, Ignatova Z, Wilson DN, Hauryliuk V

Nucleic Acids Res (2021) 49 pp. 8355-8369 [ Pubmed: 34255840 DOI: doi:10.1093/nar/gkab589 ]

Sample:

50s ribosomal protein l21 (11 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
Trna-ala-ugc (24 kDa, RNA from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l2 (30 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l34 (5 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l27 (10 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l19 (13 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l22 (12 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l16 (16 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
5s rrna (38 kDa, RNA from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l18 (12 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l14 (13 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l10 (18 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
23s rrna (949 kDa, RNA from Bacillus subtilis subsp. subtilis str. 168)
Rqc complex consisting of 50s large ribosomal subunit, peptidyl-trna, rqcp, and dr-variant rqch (Complex)
50s ribosomal protein l4 (22 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
Rqc2 homolog rqch (68 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l24 (11 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l29 (7 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l32 (6 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l17 (13 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
Uncharacterized protein yabo (9 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l35 (7 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l20 (13 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l11 (14 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l3 (22 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l30 (6 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l36 (4 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l5 (20 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l23 (10 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l33 1 (5 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l15 (15 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l28 (6 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l13 (16 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l6 (19 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)

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EMD-11890

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Bacillus subtilis ribosome-associated quality control complex state A. Ribosomal 50S subunit with peptidyl tRNA in the A/P position and RqcH.

Release date: Dec. 23, 2020
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7as9
Q-score: 0.3

Crowe-McAuliffe C, Takada H, Murina V, Polte C, Kasvandik S, Tenson T, Ignatova Z, Atkinson GC, Wilson DN, Hauryliuk V

Mol Cell (2021) 81 pp. 115- [ DOI: doi:10.1016/j.molcel.2020.11.002 Pubmed: 33259810 ]

Sample:

Trna-ala-1-1 (24 kDa, RNA from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l2 (30 kDa, Protein from Bacillus subtilis (strain 168))
50s ribosomal protein l20 (13 kDa, Protein from Bacillus subtilis (strain 168))
50s ribosomal protein l10 (18 kDa, Protein from Bacillus subtilis (strain 168))
50s ribosomal protein l17 (13 kDa, Protein from Bacillus subtilis (strain 168))
50s ribosomal protein l22 (12 kDa, Protein from Bacillus subtilis (strain 168))
5s rrna (38 kDa, RNA from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l4 (22 kDa, Protein from Bacillus subtilis (strain 168))
50s ribosomal protein l21 (11 kDa, Protein from Bacillus subtilis (strain 168))
50s ribosomal protein l27 (10 kDa, Protein from Bacillus subtilis (strain 168))
50s ribosomal protein l36 (4 kDa, Protein from Bacillus subtilis (strain 168))
50s ribosomal protein l34 (5 kDa, Protein from Bacillus subtilis (strain 168))
50s ribosomal protein l15 (15 kDa, Protein from Bacillus subtilis (strain 168))
50s ribosomal protein l29 (7 kDa, Protein from Bacillus subtilis (strain 168))
50s ribosomal protein l33 1 (5 kDa, Protein from Bacillus subtilis (strain 168))
50s ribosomal subunit in complex with p-trna, and yabo/rqcp (Complex from Bacillus subtilis (strain 168))
50s ribosomal protein l18 (12 kDa, Protein from Bacillus subtilis (strain 168))
50s ribosomal protein l16 (16 kDa, Protein from Bacillus subtilis (strain 168))
Rqc2 homolog rqch (68 kDa, Protein from Bacillus subtilis (strain 168))
Rqch (Complex from Bacillus subtilis (strain 168))
50s ribosomal protein l28 (6 kDa, Protein from Bacillus subtilis (strain 168))
50s ribosomal protein l35 (7 kDa, Protein from Bacillus subtilis (strain 168))
50s ribosomal protein l11 (14 kDa, Protein from Bacillus subtilis (strain 168))
50s ribosomal protein l14 (13 kDa, Protein from Bacillus subtilis (strain 168))
50s ribosomal protein l19 (13 kDa, Protein from Bacillus subtilis (strain 168))
50s ribosomal protein l24 (11 kDa, Protein from Bacillus subtilis (strain 168))
50s ribosomal protein l13 (16 kDa, Protein from Bacillus subtilis (strain 168))
50s ribosomal protein l23 (10 kDa, Protein from Bacillus subtilis (strain 168))
50s ribosomal protein l32 (6 kDa, Protein from Bacillus subtilis (strain 168))
23s rrna (949 kDa, RNA from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l30 (6 kDa, Protein from Bacillus subtilis (strain 168))
50s ribosomal protein l6 (19 kDa, Protein from Bacillus subtilis (strain 168))
50s ribosomal protein l3 (22 kDa, Protein from Bacillus subtilis (strain 168))
50s ribosomal protein l5 (20 kDa, Protein from Bacillus subtilis (strain 168))
50s ribosomal subunit in complex with rqch, p-trna, and yabo/rqcp (1 MDa, Complex)

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Sort by: Download

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Display: Statistics

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Select database:

EMDB [2]

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Preview first 10

Field: