EMDB < Search results

EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Research:

perform basic research in molecular biology

Services:

offer vital services to scientists in the member states

Training

scientists, students and visitors at all levels

Transfer

and development of technology

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

Edit your search query here and hit Return to execute it:

sample_name:"30S ribosomal subunit" AND author_name:"Naoe C"

Sort by: Download

Showing 1 - 3 of 3. Page 1 of 1

Display: Statistics

Download

Select database:

EMDB [3]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

EMD-3662

Download Map 3D View

RsgA-GDPNP bound to the 30S ribosomal subunit (RsgA assembly intermediate without uS3)

Release date: May 31, 2017
Resolution: 5.16 Å
EM Method: Single-particle
Fitted PDBs: 5no3
Q-score: 0.228

Lopez-Alonso JP, Kaminishi T, Kikuchi T, Hirata Y, Iturrioz I, Dhimole N, Schedlbauer A, Hase Y, Goto S, Kurita D, Muto A, Zhou S, Naoe C, Mills DJ, Gil-Carton D, Takemoto C, Himeno H, Fucini P, Connell SR

Nucleic Acids Res (2017) 45 pp. 6945-6959 [ DOI: doi:10.1093/nar/gkx324 Pubmed: 28482099 ]

Sample:

30s ribosomal protein s20 (9 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s14 (11 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s10 (11 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s11 (12 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s15 (10 kDa, Protein from Escherichia coli (strain K12))
16s ribosomal rna (497 kDa, RNA from Escherichia coli (strain K12))
30s ribosomal protein s16 (9 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s17 (9 kDa, Protein from Escherichia coli (strain K12))
Zinc ion (65 Da, Ligand)
30s ribosomal protein s2 (24 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s9 (14 kDa, Protein from Escherichia coli (strain K12))
Small ribosomal subunit biogenesis gtpase rsga (34 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s13 (12 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal subunit bound by rsga (Complex from Escherichia coli (strain K12))
30s ribosomal protein s12 (1 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s4 (23 kDa, Protein from Escherichia coli (strain K12))
Phosphoaminophosphonic acid-guanylate ester (522 Da, Ligand)
Magnesium ion (24 Da, Ligand)
30s ribosomal protein s19 (9 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s7 (14 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s5 (16 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s18 (6 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s8 (14 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s6 (12 kDa, Protein from Escherichia coli (strain K12))

[Show more]

EMD-3663

Download Map 3D View

RsgA-GDPNP bound to the 30S ribosomal subunit (RsgA assembly intermediate with uS3)

Release date: May 31, 2017
Resolution: 5.16 Å
EM Method: Single-particle
Fitted PDBs: 5no4
Q-score: 0.199

Lopez-Alonso JP, Kaminishi T, Kikuchi T, Hirata Y, Iturrioz I, Dhimole N, Schedlbauer A, Hase Y, Goto S, Kurita D, Muto A, Zhou S, Naoe C, Mills DJ, Gil-Carton D, Takemoto C, Himeno H, Fucini P, Connell SR

Nucleic Acids Res (2017) 45 pp. 6945-6959 [ DOI: doi:10.1093/nar/gkx324 Pubmed: 28482099 ]

Sample:

30s ribosomal protein s20 (9 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s14 (11 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s10 (11 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s11 (12 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s15 (10 kDa, Protein from Escherichia coli (strain K12))
16s ribosomal rna (497 kDa, RNA from Escherichia coli (strain K12))
30s ribosomal protein s3 (23 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s16 (9 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s17 (9 kDa, Protein from Escherichia coli (strain K12))
Zinc ion (65 Da, Ligand)
30s ribosomal protein s9 (14 kDa, Protein from Escherichia coli (strain K12))
Small ribosomal subunit biogenesis gtpase rsga (34 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s13 (12 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal subunit bound by rsga (Complex from Escherichia coli)
30s ribosomal protein s12 (1 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s4 (23 kDa, Protein from Escherichia coli (strain K12))
Phosphoaminophosphonic acid-guanylate ester (522 Da, Ligand)
Magnesium ion (24 Da, Ligand)
30s ribosomal protein s19 (9 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s7 (14 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s5 (16 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s18 (6 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s8 (14 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s6 (12 kDa, Protein from Escherichia coli (strain K12))

[Show more]

EMD-3661

Download Map 3D View

RsgA-GDPNP bound to the 30S ribosomal subunit (RsgA assembly intermediate)

Release date: May 24, 2017
Resolution: 5.16 Å
EM Method: Single-particle
Fitted PDBs: 5no2
Q-score: 0.246

Lopez-Alonso JP, Kaminishi T, Kikuchi T, Hirata Y, Iturrioz I, Dhimole N, Schedlbauer A, Hase Y, Goto S, Kurita D, Muto A, Zhou S, Naoe C, Mills DJ, Gil-Carton D, Takemoto C, Himeno H, Fucini P, Connell SR

Nucleic Acids Res (2017) 45 pp. 6945-6959 [ DOI: doi:10.1093/nar/gkx324 Pubmed: 28482099 ]

Sample:

30s ribosomal protein s20 (9 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s14 (11 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s10 (11 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s11 (12 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s15 (10 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s16 (9 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s17 (9 kDa, Protein from Escherichia coli (strain K12))
Zinc ion (65 Da, Ligand)
30s ribosomal protein s9 (14 kDa, Protein from Escherichia coli (strain K12))
16s ribosomal rna (497 kDa, RNA from Escherichia coli K-12)
30s ribosomal protein s13 (12 kDa, Protein from Escherichia coli (strain K12))
Small ribosomal subunit biogenesis gtpase rsga (34 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s12 (1 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s4 (23 kDa, Protein from Escherichia coli (strain K12))
Phosphoaminophosphonic acid-guanylate ester (522 Da, Ligand)
Magnesium ion (24 Da, Ligand)
30s ribosomal protein s19 (9 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s7 (14 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal subunit bound by rsga (Complex from Escherichia coli K12)
30s ribosomal protein s5 (16 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s18 (6 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s8 (14 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s6 (12 kDa, Protein from Escherichia coli (strain K12))

[Show more]

Sort by: Download

Showing 1 - 3 of 3. Page 1 of 1

Display: Statistics

Download

Select database:

EMDB [3]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

Field: