The cryo-EM map of the core region from the X. laevis NPC CR subunit
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 7fik
Q-score: 0.346
Zhu X, Huang G, Zeng C, Zhan X, Liang K, Xu Q, Zhao Y, Wang P, Wang Q, Zhou Q, Tao Q, Liu M, Lei J, Yan C, Shi Y
Science (2022) 376 pp. eabl8280-eabl8280 [ Pubmed: 35679404 DOI: doi:10.1126/science.abl8280 ]
- Nucleoporin seh1-b (39 kDa, Protein from Xenopus laevis)
- Mgc83295 protein (227 kDa, Protein from Xenopus laevis)
- Nuclear pore complex protein nup85 (75 kDa, Protein from Xenopus laevis)
- Outer nup160 (162 kDa, Protein from Xenopus laevis)
- Mgc154553 protein (41 kDa, Protein from Xenopus laevis)
- Outer nup133 (127 kDa, Protein from Xenopus laevis)
- Mgc83926 protein (36 kDa, Protein from Xenopus laevis)
- Nup155-prov protein (154 kDa, Protein from Xenopus laevis)
- Xenopus laevis nuclear pore complex (npc) (Complex from Xenopus laevis)
- Nuclear pore complex protein nup93 (93 kDa, Protein from Xenopus laevis)
- Nucleoporin nup88a (82 kDa, Protein from Xenopus laevis)
- Nuclear pore complex protein nup133 (111 kDa, Protein from Xenopus laevis)
- Nup98 (13 kDa, Protein from Xenopus laevis)
- Nup358 complex, clamps (322 kDa, Protein from Xenopus laevis)
- Nuclear pore complex protein nup98-nup96 (191 kDa, Protein from Xenopus laevis)
- Nuclear pore complex protein (105 kDa, Protein from Xenopus laevis)
- Protein sec13 homolog (35 kDa, Protein from Xenopus laevis)
The cryo-EM structure of the NTD2 from the X. laevis Nup358
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7fil
Q-score: 0.456
Zhu X, Huang G, Zeng C, Zhan X, Liang K, Xu Q, Zhao Y, Wang P, Wang Q, Zhou Q, Tao Q, Liu M, Lei J, Yan C, Shi Y
Science (2022) 376 pp. eabl8280-eabl8280 [ Pubmed: 35679404 DOI: doi:10.1126/science.abl8280 ]
- Nup358 complex, clamps (322 kDa, Protein from Xenopus laevis)
- Structure of the npc cytoplasmic ring (Complex from Xenopus laevis)
Cryo-EM structure of the IR subunit from X. laevis NPC
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 7wkk
Q-score: 0.349
Huang G, Zhan X, Zeng C, Liang K, Zhu X, Zhao Y, Wang P, Wang Q, Zhou Q, Tao Q, Liu M, Lei J, Yan C, Shi Y
Cell Res (2022) 32 pp. 451-460 [ Pubmed: 35301439 DOI: doi:10.1038/s41422-022-00633-x ]
- Mgc83295 protein (227 kDa, Protein from African clawed frog)
- The ir subunit (Complex from Xenopus laevis)
- Aaas-prov protein (57 kDa, Protein from African clawed frog)
- Nup188 domain-containing protein (195 kDa, Protein from African clawed frog)
- Nucleoporin ndc1 (74 kDa, Protein from African clawed frog)
- Il4i1 protein (55 kDa, Protein from African clawed frog)
- Nup54 (58 kDa, Protein from African clawed frog)
- Nuclear pore complex protein nup93 (93 kDa, Protein from African clawed frog)
- Mgc84997 protein (61 kDa, Protein from African clawed frog)
- Nup155-prov protein (154 kDa, Protein from African clawed frog)
Cryo-EM structure of the NR subunit from X. laevis NPC
Resolution: 5.6 Å
EM Method: Single-particle
Fitted PDBs: 7wb4
Q-score: 0.214
Huang G, Zhan X, Zeng C, Zhu X, Liang K, Zhao Y, Wang P, Wang Q, Zhou Q, Tao Q, Liu M, Lei J, Yan C, Shi Y
Cell Res (2022) 32 pp. 349-358 [ DOI: doi:10.1038/s41422-021-00610-w Pubmed: 35177819 ]
- Mgc83295 protein (227 kDa, Protein from African clawed frog)
- Outer nup160 (162 kDa, Protein from African clawed frog)
- Nuclear pore complex protein nup96 (105 kDa, Protein from African clawed frog)
- Protein elys (268 kDa, Protein from African clawed frog)
- The nr subunit (Complex from Xenopus laevis)
- Mgc154553 protein (41 kDa, Protein from African clawed frog)
- Nucleoporin seh1-b (39 kDa, Protein from African clawed frog)
- Nuclear pore complex protein nup85 (75 kDa, Protein from African clawed frog)
- Nuclear pore complex protein nup93 (93 kDa, Protein from African clawed frog)
- Nuclear pore complex protein (105 kDa, Protein from African clawed frog)
- Gator complex protein sec13 (35 kDa, Protein from African clawed frog)
- Outer nup133 (127 kDa, Protein from African clawed frog)
- Mgc83926 protein (36 kDa, Protein from African clawed frog)
- Nup155-prov protein (154 kDa, Protein from African clawed frog)
Resolution: 5.5 Å
EM Method: Single-particle
Fitted PDBs: 6lk8
Q-score: 0.089
Huang G, Zhang Y, Zhu X, Zeng C, Wang Q, Zhou Q, Tao Q, Liu M, Lei J, Yan C, Shi Y
Cell Res (2020) 30 pp. 520-531 [ Pubmed: 32376910 DOI: doi:10.1038/s41422-020-0319-4 ]
- Outer nup160 (162 kDa, Protein from Xenopus laevis)
- Nup214 complex coiled-coil region 1, helix 1 (5 kDa, Protein from Xenopus laevis)
- Mgc83926 protein (36 kDa, Protein from Xenopus laevis)
- Nup214 complex coiled coil region 2, helix 3 (2 kDa, Protein from Xenopus laevis)
- Bridge domain (33 kDa, Protein from Xenopus laevis)
- Nuclear pore complex protein (105 kDa, Protein from Xenopus laevis)
- Nup214 complex coiled coil region 2, helix 1 (2 kDa, Protein from Xenopus laevis)
- Nup214 complex coiled coil region 1, helix 3 (6 kDa, Protein from Xenopus laevis)
- Nup358 complex, clamps (322 kDa, Protein from Xenopus laevis)
- Nuclear pore complex protein nup96 (105 kDa, Protein from Xenopus laevis)
- Nucleoporin seh1-a (36 kDa, Protein from Xenopus laevis)
- Gator complex protein sec13 (35 kDa, Protein from Xenopus laevis)
- Nup214 complex coiled coil region 2, helix 2 (2 kDa, Protein from Xenopus laevis)
- Cytoplasmic ring subunit of xenopus laevis npc (Complex from Xenopus laevis)
- Mgc83295 protein (227 kDa, Protein from Xenopus laevis)
- Nuclear pore complex protein nup85 (75 kDa, Protein from Xenopus laevis)
- Mgc154553 protein (41 kDa, Protein from Xenopus laevis)
- Outer nup133 (127 kDa, Protein from Xenopus laevis)
- Nup214 complex coiled coil region 1, helix 2 (6 kDa, Protein from Xenopus laevis)
